Cucsa.242220.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.242220.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	VQ motif-containing protein
Location	scaffold02047 : 1997651 .. 1997965 (+)
Sequence length	315

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATAACCTCCGCCACCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGCCATTGACGGTTAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAACGAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTACCTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGCTACTGGAATGATTAATGATGAGGAATTTGTATCC

mRNA sequence

ATGATGATAACCTCCGCCACCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGCCATTGACGGTTAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAACGAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTACCTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGCTACTGGAATGATTAATGATGAGGAATTTGTATCC

Coding sequence (CDS)

ATGATGATAACCTCCGCCACCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGCCATTGACGGTTAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAACGAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTACCTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGCTACTGGAATGATTAATGATGAGGAATTTGTATCC

Protein sequence

MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVS

Homology

[Close]

BLAST of Cucsa.242220.1 vs. Swiss-Prot
Match: VQ8_ARATH (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=VQ8 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-07
Identity = 31/69 (44.93%), Postives = 39/69 (56.52%), Query Frame = 1


Query: 12 SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEF 71
          +++ G RP  L +   S T     S K+ P P      R SP+IIY  SPKVIH R E+F
Sbjct: 7  NEINGSRPSSLKLAGESHTIKKTSSCKSKPRP----HGRASPVIIYAHSPKVIHTRAEDF 66

Query: 72 KSFVQRLTG 81
           + VQRLTG
Sbjct: 67 MALVQRLTG 71

[Close]

BLAST of Cucsa.242220.1 vs. Swiss-Prot
Match: MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-07
Identity = 33/78 (42.31%), Postives = 42/78 (53.85%), Query Frame = 1


Query: 13 QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHR-----RSPIIIYLRSPKVIHVR 72
          Q+ GPRP PL+V+K S      K    +P P  N+        R P++IY  SPKV+H  
Sbjct: 23 QICGPRPSPLSVHKDSH---KIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHAT 82

Query: 73 PEEFKSFVQRLTGNRSSV 86
            EF + VQRLTG  S V
Sbjct: 83 ASEFMNVVQRLTGISSGV 97

[Close]

BLAST of Cucsa.242220.1 vs. Swiss-Prot
Match: NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.7e-06
Identity = 33/95 (34.74%), Postives = 45/95 (47.37%), Query Frame = 1


Query: 16  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRRSP---------IIIYLRSPKVIH 75
           GP+P PL V   S   I K      +P P   Q H++ P         + IY  +P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND 101
             P  F + VQRLTG  S+    +SS S+T    D
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKD 107

[Close]

BLAST of Cucsa.242220.1 vs. Swiss-Prot
Match: VQ20_ARATH (VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.7e-06
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1


Query: 17  PRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQ 76
           P PP L VNK S  ++ KK    +P   S+    R P+IIY  +P++IH  P++F + VQ
Sbjct: 41  PSPPTLKVNKDS--HVIKKPP--SPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQ 100

Query: 77  RLTG 81
           +LTG
Sbjct: 101 KLTG 100

[Close]

BLAST of Cucsa.242220.1 vs. TrEMBL
Match: A0A0A0LEW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G785410 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-50
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 1


Query: 1   MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60
           MMITSA ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS
Sbjct: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60

Query: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVS 106
           PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVS
Sbjct: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVS 105

[Close]

BLAST of Cucsa.242220.1 vs. TrEMBL
Match: B9SDN3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0422690 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-12
Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 1


Query: 2  MITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSP 61
          M+ S+T +   QL+GPRP PL V+K+SS    KKS   +P       HRRSP+IIYL+SP
Sbjct: 1  MVISSTRK---QLQGPRPAPLMVSKNSSK--IKKSLLPHP-----PNHRRSPVIIYLKSP 60

Query: 62 KVIHVRPEEFKSFVQRLTGNRSSVAVV------ASSCSAT 96
           VIHV PEEF+  VQRLTG +     V      +SSCS++
Sbjct: 61 DVIHVTPEEFRGLVQRLTGKKQEQTTVSASSHSSSSCSSS 90

[Close]

BLAST of Cucsa.242220.1 vs. TrEMBL
Match: A0A0B2SA13_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_002174 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-11
Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 1


Query: 3  ITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPK 62
          + S  A  H QL+GP+P  L +N++S T ISK+                SP+I++L+SPK
Sbjct: 1  MNSQAASRHKQLQGPKPASLIINRNS-TKISKQK---------QHLSHHSPVIVHLKSPK 60

Query: 63 VIHVRPEEFKSFVQRLTGNRSSVAVVASS 92
          VIHVRPEEF S VQ+LTGN  S A VA++
Sbjct: 61 VIHVRPEEFMSLVQQLTGNPVSAAAVAAN 79

[Close]

BLAST of Cucsa.242220.1 vs. TrEMBL
Match: I1NAX0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G202300 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-11
Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 1


Query: 3  ITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPK 62
          + S  A  H QL+GP+P  L +N++S T ISK+                SP+I++L+SPK
Sbjct: 1  MNSQAASRHKQLQGPKPASLIINRNS-TKISKQK---------QHLSHHSPVIVHLKSPK 60

Query: 63 VIHVRPEEFKSFVQRLTGNRSSVAVVASS 92
          VIHVRPEEF S VQ+LTGN  S A VA++
Sbjct: 61 VIHVRPEEFMSLVQQLTGNPVSAAAVAAN 79

[Close]

BLAST of Cucsa.242220.1 vs. TrEMBL
Match: A0A0D2QB25_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G233400 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-11
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 1


Query: 1  MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRR--SPIIIYL 60
          M +   + R  S+L+GPRP PL V+ SSS  + KK++  N     N    +  +P++IYL
Sbjct: 1  MSLIKHSIRGRSELQGPRPSPLKVSHSSS--LIKKASHGNIRNRINSSSSKVINPVVIYL 60

Query: 61 RSPKVIHVRPEEFKSFVQRLTGNRSS 85
          RSPK+IHVRPEEF S VQRLTG  SS
Sbjct: 61 RSPKIIHVRPEEFMSLVQRLTGKDSS 84

[Close]

BLAST of Cucsa.242220.1 vs. TAIR10
Match: AT1G68450.1 (AT1G68450.1 VQ motif-containing protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-08
Identity = 31/69 (44.93%), Postives = 39/69 (56.52%), Query Frame = 1


Query: 12 SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEF 71
          +++ G RP  L +   S T     S K+ P P      R SP+IIY  SPKVIH R E+F
Sbjct: 7  NEINGSRPSSLKLAGESHTIKKTSSCKSKPRP----HGRASPVIIYAHSPKVIHTRAEDF 66

Query: 72 KSFVQRLTG 81
           + VQRLTG
Sbjct: 67 MALVQRLTG 71

[Close]

BLAST of Cucsa.242220.1 vs. TAIR10
Match: AT3G18690.1 (AT3G18690.1 MAP kinase substrate 1)

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-08
Identity = 33/78 (42.31%), Postives = 42/78 (53.85%), Query Frame = 1


Query: 13 QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHR-----RSPIIIYLRSPKVIHVR 72
          Q+ GPRP PL+V+K S      K    +P P  N+        R P++IY  SPKV+H  
Sbjct: 23 QICGPRPSPLSVHKDSH---KIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHAT 82

Query: 73 PEEFKSFVQRLTGNRSSV 86
            EF + VQRLTG  S V
Sbjct: 83 ASEFMNVVQRLTGISSGV 97

[Close]

BLAST of Cucsa.242220.1 vs. TAIR10
Match: AT1G21326.1 (AT1G21326.1 VQ motif-containing protein)

HSP 1 Score: 55.1 bits (131), Expect = 3.1e-08
Identity = 35/95 (36.84%), Postives = 45/95 (47.37%), Query Frame = 1


Query: 16  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRRSP---------IIIYLRSPKVIH 75
           GPRP PL V   S   I K      +P P   Q H++ P         +IIY  SP++IH
Sbjct: 13  GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND 101
             P  F + VQRLTG  S+    +S  S+T    D
Sbjct: 73  THPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKD 107

[Close]

BLAST of Cucsa.242220.1 vs. TAIR10
Match: AT1G21320.1 (AT1G21320.1 nucleotide binding;nucleic acid binding)

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07
Identity = 33/95 (34.74%), Postives = 45/95 (47.37%), Query Frame = 1


Query: 16  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRRSP---------IIIYLRSPKVIH 75
           GP+P PL V   S   I K      +P P   Q H++ P         + IY  +P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND 101
             P  F + VQRLTG  S+    +SS S+T    D
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKD 107

[Close]

BLAST of Cucsa.242220.1 vs. TAIR10
Match: AT3G18360.1 (AT3G18360.1 VQ motif-containing protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1


Query: 17  PRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQ 76
           P PP L VNK S  ++ KK    +P   S+    R P+IIY  +P++IH  P++F + VQ
Sbjct: 41  PSPPTLKVNKDS--HVIKKPP--SPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQ 100

Query: 77  RLTG 81
           +LTG
Sbjct: 101 KLTG 100

[Close]

BLAST of Cucsa.242220.1 vs. NCBI nr
Match: gi|700204114|gb|KGN59247.1| (hypothetical protein Csa_3G785410 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 1.8e-50
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 1


Query: 1   MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60
           MMITSA ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS
Sbjct: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60

Query: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVS 106
           PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVS
Sbjct: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVS 105

[Close]

BLAST of Cucsa.242220.1 vs. NCBI nr
Match: gi|659085780|ref|XP_008443599.1| (PREDICTED: protein MKS1-like [Cucumis melo])

HSP 1 Score: 152.1 bits (383), Expect = 5.3e-34
Identity = 84/101 (83.17%), Postives = 87/101 (86.14%), Query Frame = 1


Query: 8   ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVR 67
           ARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRSPK+IHVR
Sbjct: 6   ARNQSQLRGPRPPPLTVNKSS-TNIFKKSTKN-----PNQRNRRSPIIIYLRSPKIIHVR 65

Query: 68  PEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVS 106
           PEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S
Sbjct: 66  PEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFAS 100

[Close]

BLAST of Cucsa.242220.1 vs. NCBI nr
Match: gi|764620702|ref|XP_011468538.1| (PREDICTED: uncharacterized protein LOC105352670 [Fragaria vesca subsp. vesca])

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-13
Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 1


Query: 4   TSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKV 63
           T+  AR H+QL+GPRP  LTV+K+S   ++KK  K NP          SP+I+YL SP++
Sbjct: 15  TNCIARPHTQLQGPRPAALTVSKNSKKMMAKKK-KQNP----------SPVIVYLISPRI 74

Query: 64  IHVRPEEFKSFVQRLTGNRSS------VAVVASSCSAT 96
           IHV+PEEF + VQRLTGN  S      +   + SCSA+
Sbjct: 75  IHVQPEEFMALVQRLTGNHESSRRVNNIVANSQSCSAS 101

[Close]

BLAST of Cucsa.242220.1 vs. NCBI nr
Match: gi|223536670|gb|EEF38312.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-12
Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 1


Query: 2  MITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSP 61
          M+ S+T +   QL+GPRP PL V+K+SS    KKS   +P       HRRSP+IIYL+SP
Sbjct: 1  MVISSTRK---QLQGPRPAPLMVSKNSSK--IKKSLLPHP-----PNHRRSPVIIYLKSP 60

Query: 62 KVIHVRPEEFKSFVQRLTGNRSSVAVV------ASSCSAT 96
           VIHV PEEF+  VQRLTG +     V      +SSCS++
Sbjct: 61 DVIHVTPEEFRGLVQRLTGKKQEQTTVSASSHSSSSCSSS 90

[Close]

BLAST of Cucsa.242220.1 vs. NCBI nr
Match: gi|731398388|ref|XP_010653237.1| (PREDICTED: protein MKS1-like [Vitis vinifera])

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-12
Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 1


Query: 13 QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFK 72
          Q++GPRP PLTVN+S ST+         P+P   +  RRSP+I+YLRSP +IHV+P++F 
Sbjct: 8  QMQGPRPTPLTVNRSCSTS---SEMIKKPVP---KNRRRSPVIVYLRSPTIIHVKPQDFM 67

Query: 73 SFVQRLTGNRSSVAVVASSCSAT 96
            VQ LTGN+SS  +V S CS++
Sbjct: 68 RLVQSLTGNKSS--MVPSFCSSS 82

The following BLAST results are available for this feature:

BLAST of Cucsa.242220.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VQ8_ARATH	1.9e-07	44.93	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=VQ8 PE=2...	[more]
MKS1_ARATH	3.2e-07	42.31	Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2	[more]
NSRB_ARATH	2.7e-06	34.74	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1	[more]
VQ20_ARATH	2.7e-06	42.19	VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1	[more]

BLAST of Cucsa.242220.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEW5_CUCSA	1.3e-50	99.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G785410 PE=4 SV=1	[more]
B9SDN3_RICCO	1.0e-12	49.00	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0422690 PE=4 SV=1	[more]
A0A0B2SA13_GLYSO	1.1e-11	47.19	Uncharacterized protein OS=Glycine soja GN=glysoja_002174 PE=4 SV=1	[more]
I1NAX0_SOYBN	1.1e-11	47.19	Uncharacterized protein OS=Glycine max GN=GLYMA_19G202300 PE=4 SV=1	[more]
A0A0D2QB25_GOSRA	1.5e-11	50.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G233400 PE=4 SV=1	[more]

BLAST of Cucsa.242220.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68450.1	1.1e-08	44.93	VQ motif-containing protein	[more]
AT3G18690.1	1.8e-08	42.31	MAP kinase substrate 1	[more]
AT1G21326.1	3.1e-08	36.84	VQ motif-containing protein	[more]
AT1G21320.1	1.5e-07	34.74	nucleotide binding;nucleic acid binding	[more]
AT3G18360.1	1.5e-07	42.19	VQ motif-containing protein	[more]

BLAST of Cucsa.242220.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700204114\|gb\|KGN59247.1\|	1.8e-50	99.05	hypothetical protein Csa_3G785410 [Cucumis sativus]	[more]
gi\|659085780\|ref\|XP_008443599.1\|	5.3e-34	83.17	PREDICTED: protein MKS1-like [Cucumis melo]	[more]
gi\|764620702\|ref\|XP_011468538.1\|	5.1e-13	46.94	PREDICTED: uncharacterized protein LOC105352670 [Fragaria vesca subsp. vesca]	[more]
gi\|223536670\|gb\|EEF38312.1\|	1.5e-12	49.00	conserved hypothetical protein [Ricinus communis]	[more]
gi\|731398388\|ref\|XP_010653237.1\|	1.9e-12	50.60	PREDICTED: protein MKS1-like [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.242220	Cucsa.242220	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.242220.1	Cucsa.242220.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.242220.1.CDS.1	Cucsa.242220.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 60..83 score: 2.
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 1..101 score: 5.0
None	No IPR available	PANTHER	PTHR33143:SF8	SUBFAMILY NOT NAMED	coord: 1..101 score: 5.0