Cucsa.239170.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCAGGGTCAAGTTAATTTAAAAAGTCCAGATCATAAATTTTGTCTTTTGGAAACTGCTGATTACGGACTCAATAATGGACTTCCACCAATTGCTCAAAGGAGAATTTTTTTTGGCCGGGAGGTCGGTGGTGCCGATAGGAAGCTTATACCAACATATCAATTAAAAAGTCGCACTTATCTTGGGCCAACTGCCATGGATGCTGAAATGGCTTTCTTAATGGCCAACCAAGCATTAGCGACATCTGGAAAACTTGTCTTTGATCCTTTTGTTGGCACTGGGAGCATTCTTGTTGGCGCAGCTCATTTTGGAGCAATGACAATG ATGTTTCAGGGTCAAGTTAATTTAAAAAGTCCAGATCATAAATTTTGTCTTTTGGAAACTGCTGATTACGGACTCAATAATGGACTTCCACCAATTGCTCAAAGGAGAATTTTTTTTGGCCGGGAGGTCGGTGGTGCCGATAGGAAGCTTATACCAACATATCAATTAAAAAGTCGCACTTATCTTGGGCCAACTGCCATGGATGCTGAAATGGCTTTCTTAATGGCCAACCAAGCATTAGCGACATCTGGAAAACTTGTCTTTGATCCTTTTGTTGGCACTGGGAGCATTCTTGTTGGCGCAGCTCATTTTGGAGCAATGACAATG ATGTTTCAGGGTCAAGTTAATTTAAAAAGTCCAGATCATAAATTTTGTCTTTTGGAAACTGCTGATTACGGACTCAATAATGGACTTCCACCAATTGCTCAAAGGAGAATTTTTTTTGGCCGGGAGGTCGGTGGTGCCGATAGGAAGCTTATACCAACATATCAATTAAAAAGTCGCACTTATCTTGGGCCAACTGCCATGGATGCTGAAATGGCTTTCTTAATGGCCAACCAAGCATTAGCGACATCTGGAAAACTTGTCTTTGATCCTTTTGTTGGCACTGGGAGCATTCTTGTTGGCGCAGCTCATTTTGGAGCAATGACAATG MFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFGAMTM
BLAST of Cucsa.239170.1 vs. Swiss-Prot
Match: TRM11_RAT (tRNA (guanine(10)-N2)-methyltransferase homolog OS=Rattus norvegicus GN=Trmt11 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 7.4e-23 Identity = 52/105 (49.52%), Postives = 70/105 (66.67%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. Swiss-Prot
Match: TRM11_MOUSE (tRNA (guanine(10)-N2)-methyltransferase homolog OS=Mus musculus GN=Trmt11 PE=1 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.3e-22 Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. Swiss-Prot
Match: TRM11_BOVIN (tRNA (guanine(10)-N2)-methyltransferase homolog OS=Bos taurus GN=TRMT11 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.3e-22 Identity = 50/105 (47.62%), Postives = 69/105 (65.71%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. Swiss-Prot
Match: TRM11_HUMAN (tRNA (guanine(10)-N2)-methyltransferase homolog OS=Homo sapiens GN=TRMT11 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.3e-22 Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. Swiss-Prot
Match: TRM11_PONAB (tRNA (guanine(10)-N2)-methyltransferase homolog OS=Pongo abelii GN=TRMT11 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.3e-22 Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. TrEMBL
Match: F6H1T7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00830 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 8.7e-47 Identity = 92/108 (85.19%), Postives = 102/108 (94.44%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. TrEMBL
Match: A5AKU7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002923 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 8.7e-47 Identity = 92/108 (85.19%), Postives = 102/108 (94.44%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. TrEMBL
Match: B9T8H4_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0380820 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.1e-46 Identity = 91/108 (84.26%), Postives = 100/108 (92.59%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. TrEMBL
Match: A0A067K523_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20179 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 1.9e-46 Identity = 90/108 (83.33%), Postives = 100/108 (92.59%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. TrEMBL
Match: V4TGE8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015108mg PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 9.6e-46 Identity = 90/108 (83.33%), Postives = 100/108 (92.59%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. TAIR10
Match: AT3G26410.1 (AT3G26410.1 methyltransferases;nucleic acid binding) HSP 1 Score: 174.9 bits (442), Expect = 2.8e-44 Identity = 87/108 (80.56%), Postives = 95/108 (87.96%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. NCBI nr
Match: gi|659092708|ref|XP_008447182.1| (PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog [Cucumis melo]) HSP 1 Score: 218.8 bits (556), Expect = 4.7e-54 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. NCBI nr
Match: gi|694397439|ref|XP_009373971.1| (PREDICTED: LOW QUALITY PROTEIN: tRNA (guanine(10)-N2)-methyltransferase homolog [Pyrus x bretschneideri]) HSP 1 Score: 195.7 bits (496), Expect = 4.3e-47 Identity = 92/108 (85.19%), Postives = 102/108 (94.44%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. NCBI nr
Match: gi|657992664|ref|XP_008388590.1| (PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog [Malus domestica]) HSP 1 Score: 195.7 bits (496), Expect = 4.3e-47 Identity = 92/108 (85.19%), Postives = 102/108 (94.44%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. NCBI nr
Match: gi|1012101621|ref|XP_015957528.1| (PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog [Arachis duranensis]) HSP 1 Score: 195.3 bits (495), Expect = 5.6e-47 Identity = 94/108 (87.04%), Postives = 101/108 (93.52%), Query Frame = 1
BLAST of Cucsa.239170.1 vs. NCBI nr
Match: gi|1021495135|ref|XP_016190580.1| (PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog [Arachis ipaensis]) HSP 1 Score: 195.3 bits (495), Expect = 5.6e-47 Identity = 94/108 (87.04%), Postives = 101/108 (93.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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