Cucsa.218970.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.218970.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Pathogenesis-related protein 1
Location	scaffold01658 : 857532 .. 858060 (+)
Sequence length	529

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTCTCAAGCTCTCCCTCTCCCTTTCTCTCTTTTGTGTCTTGACATTTTTCATGCTTCCATCTTCTCTTGCTCAAGACTCGCCTCAAGACTTCCTCGATGCCCACAACACAGCTCGTGCCCAAGACGGGGTTGAGCCAGTTCAATGGGACGAAACAGTAGCGAGTTTTGCTCTACAGTATGCAAACCAACGCATCAATGATTGTAGCCTAGTGCACTCTGGTGGACCTTACGGGGAGAATATTGCATGGGGCATGCCAGACTTATCAGGCACGGCTGCAGTTGAAATGTGGGTGAATGAGAAGGAGTTCTACGATTATGGCTCCAATACGTGTGCGGCTAGCAGGGTGTGTGGTCATTACACTCAAGTAGTGTGGAGGAATTCAGTGAGAATTGGATGTGCCAAAGTGATATGCACAAATAATGGTGGCACATTCATCACTTGCAACTACGATCCTCCAGGCAATTTCGTAGGCCAAAGGCCATATTAAGATATGTACGGTTTAATTATCCAGCGAAAATAAG

mRNA sequence

ATGGATGTTCTCAAGCTCTCCCTCTCCCTTTCTCTCTTTTGTGTCTTGACATTTTTCATGCTTCCATCTTCTCTTGCTCAAGACTCGCCTCAAGACTTCCTCGATGCCCACAACACAGCTCGTGCCCAAGACGGGGTTGAGCCAGTTCAATGGGACGAAACAGTAGCGAGTTTTGCTCTACAGTATGCAAACCAACGCATCAATGATTGTAGCCTAGTGCACTCTGGTGGACCTTACGGGGAGAATATTGCATGGGGCATGCCAGACTTATCAGGCACGGCTGCAGTTGAAATGTGGGTGAATGAGAAGGAGTTCTACGATTATGGCTCCAATACGTGTGCGGCTAGCAGGGTGTGTGGTCATTACACTCAAGTAGTGTGGAGGAATTCAGTGAGAATTGGATGTGCCAAAGTGATATGCACAAATAATGGTGGCACATTCATCACTTGCAACTACGATCCTCCAGGCAATTTCGTAGGCCAAAGGCCATATTAAGATATGTACGGTTTAATTATCCAGCGAAAATAAG

Coding sequence (CDS)

ATGGATGTTCTCAAGCTCTCCCTCTCCCTTTCTCTCTTTTGTGTCTTGACATTTTTCATGCTTCCATCTTCTCTTGCTCAAGACTCGCCTCAAGACTTCCTCGATGCCCACAACACAGCTCGTGCCCAAGACGGGGTTGAGCCAGTTCAATGGGACGAAACAGTAGCGAGTTTTGCTCTACAGTATGCAAACCAACGCATCAATGATTGTAGCCTAGTGCACTCTGGTGGACCTTACGGGGAGAATATTGCATGGGGCATGCCAGACTTATCAGGCACGGCTGCAGTTGAAATGTGGGTGAATGAGAAGGAGTTCTACGATTATGGCTCCAATACGTGTGCGGCTAGCAGGGTGTGTGGTCATTACACTCAAGTAGTGTGGAGGAATTCAGTGAGAATTGGATGTGCCAAAGTGATATGCACAAATAATGGTGGCACATTCATCACTTGCAACTACGATCCTCCAGGCAATTTCGTAGGCCAAAGGCCATATTAA

Protein sequence

MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY*

Homology

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BLAST of Cucsa.218970.1 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 7.9e-53
Identity = 96/158 (60.76%), Postives = 120/158 (75.95%), Query Frame = 1


Query: 8   LSLSLFCVLTF-FMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQR 67
           L+  + C +TF  ++ SS AQ+SPQD+L+ HN AR Q GV P+ WD  +A++A  YANQR
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 68  INDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVV 127
           I DC ++HS GPYGEN+A   P L+   AV+MWV+EK FYDY SN+C    VCGHYTQVV
Sbjct: 64  IGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGG-VCGHYTQVV 123

Query: 128 WRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           WRNSVR+GCA+V  +NNG  FITCNYDPPGNF+GQRP+
Sbjct: 124 WRNSVRLGCARV-RSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cucsa.218970.1 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 205.3 bits (521), Expect = 5.1e-52
Identity = 99/169 (58.58%), Postives = 122/169 (72.19%), Query Frame = 1


Query: 1   MDVLKLSLSLSLFCVLTFFML----PSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVA 60
           M+ +  S   S F V T  +      S  AQ+S QD+LDAHNTARA  GVEP+ WD+ VA
Sbjct: 1   MEFVLFSQMSSFFLVSTLLLFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVA 60

Query: 61  SFALQYANQRINDCSLVHSGGPYGENIAWGMPD-LSGTAAVEMWVNEKEFYDYGSNTCAA 120
           ++A  YA+Q   DC+LVHS G YGEN+AWG  D L+   AVEMWVNEK++Y + SNTCA 
Sbjct: 61  AYAQNYASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQ 120

Query: 121 SRVCGHYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
            +VCGHYTQVVWRNSVR+GCA+V C NNGG  ++CNYDPPGN +G+ PY
Sbjct: 121 GQVCGHYTQVVWRNSVRVGCARVQC-NNGGYIVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of Cucsa.218970.1 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.8e-52
Identity = 98/158 (62.03%), Postives = 120/158 (75.95%), Query Frame = 1


Query: 9   SLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRIN 68
           S++L CV+   M+  S+AQ+SPQD++DAHN AR+   V PV WDE+VA+FA QYA  R  
Sbjct: 11  SVALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAG 70

Query: 69  DCSLVHSGGP-YGENIAWGMP-DLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVV 128
           DC LVHSG P YGEN+A+G   +L+G  AV+MWV E+  Y+  +NTCA  +VCGHYTQVV
Sbjct: 71  DCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVV 130

Query: 129 WRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           WRNSVRIGCA+V C NNG  FITCNY PPGN+ GQRPY
Sbjct: 131 WRNSVRIGCARVRC-NNGAWFITCNYSPPGNYAGQRPY 167

[Close]

BLAST of Cucsa.218970.1 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.6e-51
Identity = 98/166 (59.04%), Postives = 116/166 (69.88%), Query Frame = 1


Query: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60
           M   KL + L+L   ++  M+  S AQ+SPQD++  HN ARA  GV  V W   + +FA 
Sbjct: 1   MQTPKLVILLAL--AMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQ 60

Query: 61  QYANQRINDCSLVHSGGPYGENIAWGMP--DLSGTAAVEMWVNEKEFYDYGSNTCAASRV 120
            YANQRINDC L HSGGPYGENI WG    D   + AV  WV+EK+ YDYGSNTCAA +V
Sbjct: 61  NYANQRINDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKV 120

Query: 121 CGHYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           CGHYTQVVWR S  IGCA+V+C NN G FITCNY+P GN VGQ+PY
Sbjct: 121 CGHYTQVVWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cucsa.218970.1 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.3e-51
Identity = 97/164 (59.15%), Postives = 118/164 (71.95%), Query Frame = 1


Query: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60
           M+    S  L +F  L   ++  S AQDSPQD+L  HN AR   GV P+QWDE VA++A 
Sbjct: 1   MNFTGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYAR 60

Query: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120
            YA Q   +C L+HSGGPYGEN+AWG  DLSG +AV MWV+EK  Y+Y +NTC  + VCG
Sbjct: 61  SYAEQLRGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           HYTQVVWR SVR+GCAKV C NNGGT I+CNYDP GN+V ++PY
Sbjct: 121 HYTQVVWRKSVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cucsa.218970.1 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.9e-93
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


Query: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60
           MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL
Sbjct: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60

Query: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120
           QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG
Sbjct: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY
Sbjct: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cucsa.218970.1 vs. TrEMBL
Match: A0A0A0K2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.2e-62
Identity = 110/160 (68.75%), Postives = 135/160 (84.38%), Query Frame = 1


Query: 6   LSLSLSLFCVLTFF-MLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYAN 65
           L+LS  LFCVL+ F MLPSSLAQDSPQD++++HN ARA  GV P++WDE VA+++  YAN
Sbjct: 4   LNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRYYAN 63

Query: 66  QRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQ 125
           +R+NDC LVHS GPYGENIAWG PDLSG  AV++WV+EK++Y+Y SN+CA+ +VCGHYTQ
Sbjct: 64  KRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGHYTQ 123

Query: 126 VVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           VVW+NS+R+GCAKV C N GG FI CNYDP GN VGQRPY
Sbjct: 124 VVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cucsa.218970.1 vs. TrEMBL
Match: H3K3Z1_CUCME (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-61
Identity = 110/130 (84.62%), Postives = 118/130 (90.77%), Query Frame = 1


Query: 27  QDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRINDCSLVHSGGPYGENIAWG 86
           QDSP+DF++AHN ARAQ GV PV WDE VASFA QYANQRINDC LVHSGGPYGENIAWG
Sbjct: 1   QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 60

Query: 87  MPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVVWRNSVRIGCAKVICTNNGGT 146
           MPDLSGTAAV+MWVNEK+FY+YGSNTCAA +VCGHYTQVVWRNSVRIGCAKV CTNN GT
Sbjct: 61  MPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 120

Query: 147 FITCNYDPPG 157
           FI CNY+P G
Sbjct: 121 FIICNYEPRG 130

[Close]

BLAST of Cucsa.218970.1 vs. TrEMBL
Match: A0A0A0K7P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070254 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-61
Identity = 111/159 (69.81%), Postives = 127/159 (79.87%), Query Frame = 1


Query: 6   LSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQ 65
           +SLSL  F   +  +  SS+AQD PQ+F+DAHN ARAQ GV PV WDETVA++A QYANQ
Sbjct: 8   ISLSLLFFLTSSTILFTSSIAQDLPQNFVDAHNAARAQVGVGPVSWDETVANYAQQYANQ 67

Query: 66  RINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQV 125
            INDC +VHS GPYGEN+AW   DLSGT AV+MWVNEK+FYDY SN+C  S  C HYTQV
Sbjct: 68  HINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVRSE-CRHYTQV 127

Query: 126 VWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           VW+NSV+IGCAKV C NNGGTFITCNYDP GN+V QRPY
Sbjct: 128 VWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 165

[Close]

BLAST of Cucsa.218970.1 vs. TrEMBL
Match: V4U9J3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029431mg PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 4.2e-61
Identity = 110/156 (70.51%), Postives = 126/156 (80.77%), Query Frame = 1


Query: 9   SLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRIN 68
           SL LFC+L   ++ SS AQD PQD+++AHN ARAQ GV PV WD+ VAS+A  YAN+R  
Sbjct: 8   SLPLFCILGLALILSSHAQDLPQDYVNAHNAARAQVGVGPVTWDDRVASYAQNYANKRKG 67

Query: 69  DCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVVWR 128
           DC+LVHSGGPYGEN+AW    LSGT AV++WVNEK  YDY SNTCAA +VCGHYTQVVWR
Sbjct: 68  DCNLVHSGGPYGENLAWSSAGLSGTDAVKLWVNEKADYDYNSNTCAAGKVCGHYTQVVWR 127

Query: 129 NSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
            SVRIGCAKV C NN GTFI CNYDPPGNFVG++PY
Sbjct: 128 KSVRIGCAKVTCNNNKGTFIGCNYDPPGNFVGEKPY 163

[Close]

BLAST of Cucsa.218970.1 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 211.5 bits (537), Expect = 4.0e-55
Identity = 100/158 (63.29%), Postives = 120/158 (75.95%), Query Frame = 1


Query: 9   SLSLFCVLTFFM--LPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQR 68
           S +LF  +TFF+  +    AQDSPQDFL  HN ARA+ GV P++WDE VA++A  YANQR
Sbjct: 7   SQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQR 66

Query: 69  INDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVV 128
             DC++ HS G YGENIAW    ++G AAV+MWV+E+  YDY SNTCA  + CGHYTQVV
Sbjct: 67  KGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVV 126

Query: 129 WRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           WRNS R+GCAKV C NNG TFITCNYDPPGN+VG+ PY
Sbjct: 127 WRNSERLGCAKVRC-NNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cucsa.218970.1 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 203.8 bits (517), Expect = 8.4e-53
Identity = 94/166 (56.63%), Postives = 125/166 (75.30%), Query Frame = 1


Query: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60
           M +LK ++ L L  +  F+    SLA+D  Q FL+AHN AR + G++P+ WD+ VA++A 
Sbjct: 1   MSLLKTNI-LFLLAIALFY---GSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAA 60

Query: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTC--AASRV 120
            YANQRINDC+LVHS GP+GENIA    ++S   A EMW+NEK++YDY SNTC       
Sbjct: 61  SYANQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGT 120

Query: 121 CGHYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           C HYTQVVW+N+VR+GCAKV+C N+GGTFITCNYDPPGN++G++P+
Sbjct: 121 CLHYTQVVWKNTVRLGCAKVVC-NSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Cucsa.218970.1 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 202.6 bits (514), Expect = 1.9e-52
Identity = 97/164 (59.15%), Postives = 118/164 (71.95%), Query Frame = 1


Query: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60
           M+    S  L +F  L   ++  S AQDSPQD+L  HN AR   GV P+QWDE VA++A 
Sbjct: 1   MNFTGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYAR 60

Query: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120
            YA Q   +C L+HSGGPYGEN+AWG  DLSG +AV MWV+EK  Y+Y +NTC  + VCG
Sbjct: 61  SYAEQLRGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           HYTQVVWR SVR+GCAKV C NNGGT I+CNYDP GN+V ++PY
Sbjct: 121 HYTQVVWRKSVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cucsa.218970.1 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 200.7 bits (509), Expect = 7.1e-52
Identity = 98/164 (59.76%), Postives = 118/164 (71.95%), Query Frame = 1


Query: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60
           M V   S  L +   L   ++    AQDS QD+++AHN AR+Q GV P+QWDE +A++A 
Sbjct: 1   MKVTSYSRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYAR 60

Query: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120
            YANQ   DC LVHS GPYGEN+A    DLSG AAV +WVNEK  Y+Y +NTC  + VCG
Sbjct: 61  NYANQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           HYTQVVWRNSVR+GCAKV C NNGGT I+CNYDPPGN+  Q+PY
Sbjct: 121 HYTQVVWRNSVRLGCAKVRC-NNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cucsa.218970.1 vs. TAIR10
Match: AT5G26130.1 (AT5G26130.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 181.0 bits (458), Expect = 5.9e-46
Identity = 89/160 (55.62%), Postives = 107/160 (66.88%), Query Frame = 1


Query: 7   SLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQR 66
           +L LS+  +   F +P   AQD PQD+LD HN AR Q GV P++W      +A  YA QR
Sbjct: 9   TLILSVIVLFLAFAVPLK-AQDQPQDYLDEHNRARTQVGVPPMKWHAGAEQYAWNYAQQR 68

Query: 67  INDCSLVHSG--GPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQ 126
             DCSL HS   G YGEN+AW    LSG  AV++WVNEK  Y Y SNTC+  + CGHYTQ
Sbjct: 69  KGDCSLTHSNSNGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQ 128

Query: 127 VVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           VVWR S  +GCAKV C +NGGTF+TCNY PPGN+ G+ PY
Sbjct: 129 VVWRTSEWVGCAKVKC-DNGGTFVTCNYYPPGNYRGRWPY 166

[Close]

BLAST of Cucsa.218970.1 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 349.7 bits (896), Expect = 2.7e-93
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


Query: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60
           MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL
Sbjct: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60

Query: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120
           QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG
Sbjct: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY
Sbjct: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Cucsa.218970.1 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 302.4 bits (773), Expect = 4.9e-79
Identity = 140/164 (85.37%), Postives = 150/164 (91.46%), Query Frame = 1


Query: 1   MDVLKLSLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFAL 60
           MDVLKLSLSLSLFCVLTF MLPSSLAQDSP+DF++AHN ARAQ GV PV WDE VASFA 
Sbjct: 1   MDVLKLSLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFAR 60

Query: 61  QYANQRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCG 120
           QYANQRINDC LVHSGGPYGENIAWGMPDLSGTAAV+MWVNEK+FY+YGSNTCAA +VCG
Sbjct: 61  QYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCG 120

Query: 121 HYTQVVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           HYTQVVWRNSVRIGCAKV CTNN GTFI CNY+P GN +GQ+PY
Sbjct: 121 HYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Cucsa.218970.1 vs. NCBI nr
Match: gi|659110127|ref|XP_008455062.1| (PREDICTED: pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 2.2e-63
Identity = 114/160 (71.25%), Postives = 132/160 (82.50%), Query Frame = 1


Query: 6   LSLSLSLFCVLTFF-MLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYAN 65
           L+LS  LFCVL  F MLPSSLAQDSPQD+L+ HN ARA   V  +QWDE VA+++ QYAN
Sbjct: 4   LNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYAN 63

Query: 66  QRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQ 125
            R+NDC LVHS GPYGENIAWG PDLSGT AV++WVNEK++YDY +N+CA+ +VCGHYTQ
Sbjct: 64  LRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQ 123

Query: 126 VVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           VVW+NSVR+GCAKV C N GG FI CNYDP GN VGQRPY
Sbjct: 124 VVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cucsa.218970.1 vs. NCBI nr
Match: gi|568866976|ref|XP_006486822.1| (PREDICTED: pathogenesis-related protein 1-like [Citrus sinensis])

HSP 1 Score: 247.7 bits (631), Expect = 1.4e-62
Identity = 113/156 (72.44%), Postives = 127/156 (81.41%), Query Frame = 1


Query: 9   SLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQRIN 68
           SL LFC+L   ++ SS AQDSPQD+++AHN ARAQ GV PV WD+ VAS+A  YANQR  
Sbjct: 8   SLPLFCILGLALILSSHAQDSPQDYVNAHNAARAQVGVGPVTWDDRVASYAQNYANQRKG 67

Query: 69  DCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVVWR 128
           DC+LVHSGGPYGEN+AW    LSGT AV+MWVNEK  YDY SNTCA  +VCGHYTQVVWR
Sbjct: 68  DCNLVHSGGPYGENLAWSSAGLSGTDAVKMWVNEKADYDYNSNTCAEGKVCGHYTQVVWR 127

Query: 129 NSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           NSVRIGCAKV C NN GTFI CNYDPPGNFVG++PY
Sbjct: 128 NSVRIGCAKVTCNNNKGTFIGCNYDPPGNFVGEKPY 163

[Close]

BLAST of Cucsa.218970.1 vs. NCBI nr
Match: gi|778724786|ref|XP_004136929.2| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 3.2e-62
Identity = 110/160 (68.75%), Postives = 135/160 (84.38%), Query Frame = 1


Query: 6   LSLSLSLFCVLTFF-MLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYAN 65
           L+LS  LFCVL+ F MLPSSLAQDSPQD++++HN ARA  GV P++WDE VA+++  YAN
Sbjct: 4   LNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRYYAN 63

Query: 66  QRINDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQ 125
           +R+NDC LVHS GPYGENIAWG PDLSG  AV++WV+EK++Y+Y SN+CA+ +VCGHYTQ
Sbjct: 64  KRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGHYTQ 123

Query: 126 VVWRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 165
           VVW+NS+R+GCAKV C N GG FI CNYDP GN VGQRPY
Sbjct: 124 VVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

The following BLAST results are available for this feature:

BLAST of Cucsa.218970.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	7.9e-53	60.76	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1C_TOBAC	5.1e-52	58.58	Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3	[more]
PR1_SAMNI	8.8e-52	62.03	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]
PR13_HORVU	2.6e-51	59.04	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1	[more]
PR1_ARATH	3.3e-51	59.15	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]

BLAST of Cucsa.218970.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6A4_CUCSA	1.9e-93	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1	[more]
A0A0A0K2V9_CUCSA	2.2e-62	68.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1	[more]
H3K3Z1_CUCME	2.5e-61	84.62	Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1	[more]
A0A0A0K7P0_CUCSA	2.5e-61	69.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070254 PE=3 SV=1	[more]
V4U9J3_9ROSI	4.2e-61	70.51	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029431mg PE=3 SV=1	[more]

BLAST of Cucsa.218970.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33720.1	4.0e-55	63.29	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT3G19690.1	8.4e-53	56.63	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	1.9e-52	59.15	pathogenesis-related gene 1	[more]
AT2G14580.1	7.1e-52	59.76	basic pathogenesis-related protein 1	[more]
AT5G26130.1	5.9e-46	55.63	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of Cucsa.218970.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724783\|ref\|XP_011658861.1\|	2.7e-93	100.00	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110129\|ref\|XP_008455064.1\|	4.9e-79	85.37	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]	[more]
gi\|659110127\|ref\|XP_008455062.1\|	2.2e-63	71.25	PREDICTED: pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|568866976\|ref\|XP_006486822.1\|	1.4e-62	72.44	PREDICTED: pathogenesis-related protein 1-like [Citrus sinensis]	[more]
gi\|778724786\|ref\|XP_004136929.2\|	3.2e-62	68.75	PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.218970	Cucsa.218970	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.218970.1	Cucsa.218970.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.218970.1.CDS.1	Cucsa.218970.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.218970.1.three_prime_UTR.1	Cucsa.218970.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 49..67 score: 2.3E-20coord: 119..135 score: 2.3E-20coord: 95..108 score: 2.3E-20coord: 147..160 score: 2.3
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..164 score: 6.1
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 23..164 score: 2.1
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 34..152 score: 3.9
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 28..160 score: 2.1
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 14..164 score: 1.7
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 120..130 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 147..158 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..164 score: 6.1