Cucsa.218920.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.218920.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Pathogenesis-related protein 1
Location	scaffold01658 : 836426 .. 836905 (+)
Sequence length	480

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTCGCCACCACTCTCTCTGCCCTTTGCATCGTTGCACTAGCCCTAACCCCAATCGTCATTGCTCAAAACAGCCCTCAAGACTTCTTTGACGCGCACAATGCAGTGCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGACGAAGAACTTGAAGCTTACGCTAAAAATTATATCACGTCGAAGATTAAAACTTGTGAAATGGTGCACTTTGTTGGCCCTTATGGTGAGAACTTGGCAACAGCGAACCCCGTGTTAACCGCAGCAGCTTCAGTGAACACATGGGCAGCCGAGAAGAAGTACTATAACCATAACTCGAACAAATGTGAGGGAGGCGAGTGCCGACATTATAGACAGTTGGTGTGGAAGAATAGTTTTTTGGTGGGTTGTGCTACTGTTAAATGCAAGAACAATTGGTCTTTAGTCTCATGCAACTATAGTCCTTCTGGGAATGTTGTAGGTGAGCGACCTTATTAG

mRNA sequence

ATGGCACTCGCCACCACTCTCTCTGCCCTTTGCATCGTTGCACTAGCCCTAACCCCAATCGTCATTGCTCAAAACAGCCCTCAAGACTTCTTTGACGCGCACAATGCAGTGCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGACGAAGAACTTGAAGCTTACGCTAAAAATTATATCACGTCGAAGATTAAAACTTGTGAAATGGTGCACTTTGTTGGCCCTTATGGTGAGAACTTGGCAACAGCGAACCCCGTGTTAACCGCAGCAGCTTCAGTGAACACATGGGCAGCCGAGAAGAAGTACTATAACCATAACTCGAACAAATGTGAGGGAGGCGAGTGCCGACATTATAGACAGTTGGTGTGGAAGAATAGTTTTTTGGTGGGTTGTGCTACTGTTAAATGCAAGAACAATTGGTCTTTAGTCTCATGCAACTATAGTCCTTCTGGGAATGTTGTAGGTGAGCGACCTTATTAG

Coding sequence (CDS)

ATGGCACTCGCCACCACTCTCTCTGCCCTTTGCATCGTTGCACTAGCCCTAACCCCAATCGTCATTGCTCAAAACAGCCCTCAAGACTTCTTTGACGCGCACAATGCAGTGCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGACGAAGAACTTGAAGCTTACGCTAAAAATTATATCACGTCGAAGATTAAAACTTGTGAAATGGTGCACTTTGTTGGCCCTTATGGTGAGAACTTGGCAACAGCGAACCCCGTGTTAACCGCAGCAGCTTCAGTGAACACATGGGCAGCCGAGAAGAAGTACTATAACCATAACTCGAACAAATGTGAGGGAGGCGAGTGCCGACATTATAGACAGTTGGTGTGGAAGAATAGTTTTTTGGTGGGTTGTGCTACTGTTAAATGCAAGAACAATTGGTCTTTAGTCTCATGCAACTATAGTCCTTCTGGGAATGTTGTAGGTGAGCGACCTTATTAG

Protein sequence

MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY*

Homology

[Close]

BLAST of Cucsa.218920.1 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-43
Identity = 79/159 (49.69%), Postives = 101/159 (63.52%), Query Frame = 1


Query: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60
           M   TT+ A  I    L     AQNSPQD+ + HNA R +VG  P+ WD  L AYA+NY 
Sbjct: 1   MGFLTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYA 60

Query: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120
             +I  C M+H  GPYGENLA A P L AA +V  W  EK++Y++NSN C GG C HY Q
Sbjct: 61  NQRIGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQ 120

Query: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           +VW+NS  +GCA V+  N W  ++CNY P GN +G+RP+
Sbjct: 121 VVWRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cucsa.218920.1 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.8e-40
Identity = 76/139 (54.68%), Postives = 94/139 (67.63%), Query Frame = 1


Query: 23  AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCEMVHFVGPYGENLAT 82
           AQNS QD+ DAHN  RA VG EPL WD  + AYA+NY++     C +VH  G YGENLA 
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQYGENLAQ 89

Query: 83  -ANPVLTAAASVNTWAAEKKYYNHNSNKCEGGE-CRHYRQLVWKNSFLVGCATVKCKNNW 142
            +   +TAA +V  W  EK+YY+H+SN C  G+ C HY Q+VW+NS  VGCA VKC N  
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVKCNNGG 149

Query: 143 SLVSCNYSPSGNVVGERPY 160
            +VSCNY P GNV+G+ PY
Sbjct: 150 YVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Cucsa.218920.1 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 164.5 bits (415), Expect = 9.8e-40
Identity = 81/164 (49.39%), Postives = 106/164 (64.63%), Query Frame = 1


Query: 3   LATTLSALCIVALALTPIVI-----AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAK 62
           L + +S+  +V+  L  ++I     AQNS QD+ DAHN  RA VG EPL WD+++ AYA+
Sbjct: 5   LFSQMSSFFLVSTLLLFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQ 64

Query: 63  NYITSKIKTCEMVHFVGPYGENLA-TANPVLTAAASVNTWAAEKKYYNHNSNKCEGGE-C 122
           NY +     C +VH  G YGENLA  +   LTAA +V  W  EK+YY H+SN C  G+ C
Sbjct: 65  NYASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVC 124

Query: 123 RHYRQLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
            HY Q+VW+NS  VGCA V+C N   +VSCNY P GNV+G+ PY
Sbjct: 125 GHYTQVVWRNSVRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of Cucsa.218920.1 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.3e-39
Identity = 81/164 (49.39%), Postives = 104/164 (63.41%), Query Frame = 1


Query: 3   LATTLSALCIVALALTPIVI-----AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAK 62
           L + L +  +V+  L  +VI     AQNS QD+ DAHN  RA VG EPL WD+++ AYA+
Sbjct: 5   LFSQLPSFLLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQ 64

Query: 63  NYITSKIKTCEMVHFVGPYGENLAT-ANPVLTAAASVNTWAAEKKYYNHNSNKCEGGE-C 122
           NY +     C +VH  G YGENLA  +   +TAA +V  W  EK+YY+H+SN C  G+ C
Sbjct: 65  NYASQLAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVC 124

Query: 123 RHYRQLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
            HY Q+VW+NS  VGCA V+C N   +VSCNY P GN  GE PY
Sbjct: 125 GHYTQVVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Cucsa.218920.1 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-37
Identity = 73/157 (46.50%), Postives = 101/157 (64.33%), Query Frame = 1


Query: 6   TLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIK 65
           +++ +C+VAL +    +AQNSPQD+ DAHNA R+ V   P+ WDE + A+A+ Y  S+  
Sbjct: 11  SVALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAG 70

Query: 66  TCEMVHFVGP-YGENLATANPV-LTAAASVNTWAAEKKYYNHNSNKCEGGE-CRHYRQLV 125
            C +VH   P YGENLA  +   LT   +V+ W AE+  YN N+N C  G+ C HY Q+V
Sbjct: 71  DCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVV 130

Query: 126 WKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           W+NS  +GCA V+C N    ++CNYSP GN  G+RPY
Sbjct: 131 WRNSVRIGCARVRCNNGAWFITCNYSPPGNYAGQRPY 167

[Close]

BLAST of Cucsa.218920.1 vs. TrEMBL
Match: A0A0A0K4C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070250 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.8e-64
Identity = 113/160 (70.62%), Postives = 136/160 (85.00%), Query Frame = 1


Query: 1   MALATTLSALCIVALALT-PIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNY 60
           MAL+   S++C++ L LT P+++A N+PQ++ DAHNAVRA+VGA+P+FWDEEL  YA+NY
Sbjct: 4   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 63

Query: 61  ITSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYR 120
           + SKI TCEMVH  G YGENLAT + +LTAAA+V  WA EKKYY+HNSNKC GGECRHY 
Sbjct: 64  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 123

Query: 121 QLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           QLVWKNSFL+GCA +KCKNNWSLVSCNYSP+GNVVGE PY
Sbjct: 124 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 163

[Close]

BLAST of Cucsa.218920.1 vs. TrEMBL
Match: A0A061DYW2_THECC (Pathogenesis-related protein 1 OS=Theobroma cacao GN=TCM_006335 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43
Identity = 80/159 (50.31%), Postives = 107/159 (67.30%), Query Frame = 1


Query: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60
           M L     A+C++A  L  + +AQNSPQD+   H+A RA+VG  P+ WD E+ AYA++Y 
Sbjct: 1   MGLTKFSLAICLLASTLVHVSLAQNSPQDYLSVHDAARAQVGVGPMTWDPEVAAYAQDYA 60

Query: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120
             ++  C +VH  GPYGEN+A A+  LT A +V  W  EK YYN+++N C GGEC HY Q
Sbjct: 61  NIRVADCGLVHSYGPYGENIAEASYALTGAEAVQMWVDEKPYYNYDANICVGGECLHYTQ 120

Query: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           +VW+NS  +GCA V+C + W  V+CNY P GN VGERPY
Sbjct: 121 VVWRNSTRLGCARVECNSGWWFVTCNYDPPGNYVGERPY 159

[Close]

BLAST of Cucsa.218920.1 vs. TrEMBL
Match: E2GEV3_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43
Identity = 80/148 (54.05%), Postives = 101/148 (68.24%), Query Frame = 1


Query: 12  IVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCEMVH 71
           ++ LAL     AQNSPQD+ DAHNA RA+VG   + W++ + AYA+NY   +I  C +VH
Sbjct: 14  LLGLALAHTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQRISDCNLVH 73

Query: 72  FVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKNSFLVGC 131
             GPYGENLA  +  LT   +VN W  EK YY++NSN C GGEC HY Q+VW+NS  +GC
Sbjct: 74  SGGPYGENLAKGSGSLTGTDAVNLWVGEKSYYDYNSNSCVGGECGHYTQVVWRNSVRLGC 133

Query: 132 ATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           A V+C N W  V+CNY P GN VG+RPY
Sbjct: 134 ARVQCNNGWWFVTCNYDPPGNYVGQRPY 161

[Close]

BLAST of Cucsa.218920.1 vs. TrEMBL
Match: F6HBN9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00690 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-43
Identity = 80/148 (54.05%), Postives = 101/148 (68.24%), Query Frame = 1


Query: 12  IVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCEMVH 71
           ++ LAL     AQNSPQD+ DAHNA RA+VG   + W++ + AYA+NY   +I  C +VH
Sbjct: 34  LMGLALAHTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQRISDCNLVH 93

Query: 72  FVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKNSFLVGC 131
             GPYGENLA  +  LT   +VN W  EK YY++NSN C GGEC HY Q+VW+NS  +GC
Sbjct: 94  SGGPYGENLAKGSGSLTGTDAVNLWVGEKPYYDYNSNSCVGGECGHYTQVVWRNSVRLGC 153

Query: 132 ATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           A V+C N W  V+CNY P GN VG+RPY
Sbjct: 154 ARVQCNNGWWFVTCNYDPPGNYVGQRPY 181

[Close]

BLAST of Cucsa.218920.1 vs. TrEMBL
Match: A5BC26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042545 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-43
Identity = 80/148 (54.05%), Postives = 101/148 (68.24%), Query Frame = 1


Query: 12  IVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCEMVH 71
           ++ LAL     AQNSPQD+ DAHNA RA+VG   + W++ + AYA+NY   +I  C +VH
Sbjct: 14  LMGLALAHTCCAQNSPQDYVDAHNAARAQVGVGSITWNDTVAAYAQNYANQRISDCNLVH 73

Query: 72  FVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKNSFLVGC 131
             GPYGENLA  +  LT   +VN W  EK YY++NSN C GGEC HY Q+VW+NS  +GC
Sbjct: 74  SGGPYGENLAKGSGSLTGTDAVNLWVGEKPYYDYNSNSCVGGECGHYTQVVWRNSVRLGC 133

Query: 132 ATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           A V+C N W  V+CNY P GN VG+RPY
Sbjct: 134 ARVQCNNGWWFVTCNYDPPGNYVGQRPY 161

[Close]

BLAST of Cucsa.218920.1 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 154.1 bits (388), Expect = 7.4e-38
Identity = 71/159 (44.65%), Postives = 100/159 (62.89%), Query Frame = 1


Query: 5   TTLSALCIVALALTPIVI----AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 64
           T+ S + I+  AL   ++    AQ+S QD+ +AHN  R+++G  P+ WDE L AYA+NY 
Sbjct: 4   TSYSRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYA 63

Query: 65  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 124
                 C +VH  GPYGENLA +   L+  A+VN W  EK  YN+++N C  G C HY Q
Sbjct: 64  NQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQ 123

Query: 125 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           +VW+NS  +GCA V+C N  +++SCNY P GN   ++PY
Sbjct: 124 VVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cucsa.218920.1 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 8.2e-37
Identity = 68/162 (41.98%), Postives = 105/162 (64.81%), Query Frame = 1


Query: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60
           M+L  T + L ++A+AL    +A++  Q F +AHN  R +VG +PL WD+E+ AYA +Y 
Sbjct: 1   MSLLKT-NILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYA 60

Query: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKC---EGGECRH 120
             +I  C +VH  GP+GEN+A ++  ++A  +   W  EK+YY+++SN C    GG C H
Sbjct: 61  NQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLH 120

Query: 121 YRQLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           Y Q+VWKN+  +GCA V C +  + ++CNY P GN +GE+P+
Sbjct: 121 YTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Cucsa.218920.1 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 149.4 bits (376), Expect = 1.8e-36
Identity = 72/153 (47.06%), Postives = 97/153 (63.40%), Query Frame = 1


Query: 10  LCIVALALTPIVI-AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKTCE 69
           L IVA++   +   AQN+PQD+ ++HN  RA+VG   + WD  L AYA NY   +   C 
Sbjct: 9   LVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCN 68

Query: 70  MVHFVGPYGENLAT-ANPVLTAAASVNTWAAEKKYYNHNSNKCEGG-ECRHYRQLVWKNS 129
           +VH  GPYGENLA  ++   +A ++V  W  EK YY++  N C GG +C HY Q+VW++S
Sbjct: 69  LVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDS 128

Query: 130 FLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
             +GCA V+C N W  VSCNY+  GN VGE PY
Sbjct: 129 VKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of Cucsa.218920.1 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 149.1 bits (375), Expect = 2.4e-36
Identity = 70/159 (44.03%), Postives = 96/159 (60.38%), Query Frame = 1


Query: 5   TTLSALCIVALALTPIVI----AQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 64
           T  S   IV +AL   ++    AQ+SPQD+   HN  R  VG  P+ WDE + AYA++Y 
Sbjct: 4   TGYSRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYA 63

Query: 65  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 124
                 C ++H  GPYGENLA  +  L+  ++VN W +EK  YN+ +N C  G C HY Q
Sbjct: 64  EQLRGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQ 123

Query: 125 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           +VW+ S  +GCA V+C N  +++SCNY P GN V E+PY
Sbjct: 124 VVWRKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cucsa.218920.1 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 3.5e-35
Identity = 72/158 (45.57%), Postives = 97/158 (61.39%), Query Frame = 1


Query: 3   LATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITS 62
           LA T   + IV L       AQ+SPQDF   HN  RA+VG  PL WDE++ AYA+NY   
Sbjct: 12  LAITFFLVLIVHLK------AQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQ 71

Query: 63  KIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCE-GGECRHYRQL 122
           +   C M H  G YGEN+A ++  +T  A+V+ W  E+  Y+++SN C    +C HY Q+
Sbjct: 72  RKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQV 131

Query: 123 VWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           VW+NS  +GCA V+C N  + ++CNY P GN VGE PY
Sbjct: 132 VWRNSERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cucsa.218920.1 vs. NCBI nr
Match: gi|449438610|ref|XP_004137081.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 6.7e-89
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1


Query: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60
           MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI
Sbjct: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60

Query: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120
           TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ
Sbjct: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120

Query: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY
Sbjct: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 159

[Close]

BLAST of Cucsa.218920.1 vs. NCBI nr
Match: gi|778724761|ref|XP_004137082.2| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 9.7e-64
Identity = 113/160 (70.62%), Postives = 136/160 (85.00%), Query Frame = 1


Query: 1   MALATTLSALCIVALALT-PIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNY 60
           MAL+   S++C++ L LT P+++A N+PQ++ DAHNAVRA+VGA+P+FWDEEL  YA+NY
Sbjct: 4   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 63

Query: 61  ITSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYR 120
           + SKI TCEMVH  G YGENLAT + +LTAAA+V  WA EKKYY+HNSNKC GGECRHY 
Sbjct: 64  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 123

Query: 121 QLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           QLVWKNSFL+GCA +KCKNNWSLVSCNYSP+GNVVGE PY
Sbjct: 124 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 163

[Close]

BLAST of Cucsa.218920.1 vs. NCBI nr
Match: gi|659110135|ref|XP_008455067.1| (PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 9.7e-64
Identity = 109/159 (68.55%), Postives = 133/159 (83.65%), Query Frame = 1


Query: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60
           MAL+   S++C++ L L P+++A N+PQ++ DAHNAVRA+VG +P+FWDEEL  YA+NY+
Sbjct: 29  MALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYL 88

Query: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120
            SK+ TCEMVH  GPYGENLAT + +LTAAA+V  WA EKKYY+HNSN C GGECRHY Q
Sbjct: 89  ESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYTQ 148

Query: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           LVWKNSFL+GCA +KCKNNWSLVSCNYSP+GNV GE PY
Sbjct: 149 LVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

[Close]

BLAST of Cucsa.218920.1 vs. NCBI nr
Match: gi|659110137|ref|XP_008455068.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-44
Identity = 84/154 (54.55%), Postives = 106/154 (68.83%), Query Frame = 1


Query: 7   LSALCIVALAL-TPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIK 66
           LS +C+V+  L T I  AQNSPQDF D HN +RA VG  P+ WD+ L AYA++Y  SKI 
Sbjct: 9   LSTICLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKID 68

Query: 67  TCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKN 126
           TCEM H  GPYGENLA     +T   +V  WA EKK+YNH+ N+C G EC HY Q+VW++
Sbjct: 69  TCEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECGHYTQIVWRH 128

Query: 127 SFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
           +  +GC  VKC+NNW  V CNY+P GN +G+ PY
Sbjct: 129 TTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 162

[Close]

BLAST of Cucsa.218920.1 vs. NCBI nr
Match: gi|659110143|ref|XP_008455071.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 2.9e-44
Identity = 85/153 (55.56%), Postives = 104/153 (67.97%), Query Frame = 1


Query: 7   LSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYITSKIKT 66
           +S + +  + L PI +AQNS QDF +AHN  RAKVG  P+ W+  L AYA+ Y   KI T
Sbjct: 9   ISFMMMGLITLAPITLAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQTYANKKIGT 68

Query: 67  CEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQLVWKNS 126
           CEM H  GPYGENLA     +TA  +VN W +EKKYY+H+SN+C G ECRHY Q+VW+ +
Sbjct: 69  CEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYTQVVWRGT 128

Query: 127 FLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 160
             VGCA VKC NNW  V CNY P GN VG+ PY
Sbjct: 129 KHVGCARVKCHNNWIFVICNYDPPGNYVGQFPY 161

The following BLAST results are available for this feature:

BLAST of Cucsa.218920.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	1.1e-43	49.69	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1B_TOBAC	9.8e-40	54.68	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PR1C_TOBAC	9.8e-40	49.39	Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3	[more]
PR1A_TOBAC	6.3e-39	49.39	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1_SAMNI	3.5e-37	46.50	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]

BLAST of Cucsa.218920.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4C6_CUCSA	6.8e-64	70.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070250 PE=3 SV=1	[more]
A0A061DYW2_THECC	1.0e-43	50.31	Pathogenesis-related protein 1 OS=Theobroma cacao GN=TCM_006335 PE=4 SV=1	[more]
E2GEV3_9ROSI	1.0e-43	54.05	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
F6HBN9_VITVI	1.3e-43	54.05	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00690 PE=3 SV=...	[more]
A5BC26_VITVI	1.3e-43	54.05	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042545 PE=3 SV=1	[more]

BLAST of Cucsa.218920.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14580.1	7.4e-38	44.65	basic pathogenesis-related protein 1	[more]
AT3G19690.1	8.2e-37	41.98	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50060.1	1.8e-36	47.06	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	2.4e-36	44.03	pathogenesis-related gene 1	[more]
AT4G33720.1	3.5e-35	45.57	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of Cucsa.218920.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438610\|ref\|XP_004137081.1\|	6.7e-89	100.00	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|778724761\|ref\|XP_004137082.2\|	9.7e-64	70.63	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110135\|ref\|XP_008455067.1\|	9.7e-64	68.55	PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo]	[more]
gi\|659110137\|ref\|XP_008455068.1\|	1.0e-44	54.55	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|659110143\|ref\|XP_008455071.1\|	2.9e-44	55.56	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.218920	Cucsa.218920	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.218920.1	Cucsa.218920.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.218920.1.CDS.1	Cucsa.218920.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 142..155 score: 1.1E-13coord: 92..105 score: 1.1E-13coord: 115..131 score: 1.1E-13coord: 46..64 score: 1.1
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..159 score: 3.6
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 20..159 score: 1.2
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 31..147 score: 9.9
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 25..155 score: 8.6
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 10..159 score: 4.19
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 142..153 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..159 score: 3.6