Cucsa.218790.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGTTGTTTGGCCTCCGGCCGTCGTCTCCGGCAAATCTTCCGTGTCCGCCGGTTGCAGCAATACCGGCGAGTGGGTTACTGTTATCATCTCTCTCTCTCTATATATATATATATCGGCACTCGCACTGTCTCTCAGTTACTCTACTGCACAGCCTCCAGTCTATCGCCGCCGTCATTGCACGTCTGCGAAGGGTCGTCGCCGGTTTGGTATTTGTACGGTGGGTAAGATTATGGGTTCCTTCTAATTTTCTGTCTTAATTGATCTCGAATACAATTAAGTGTTTAGCTTGAAATTTATTTACCCATGATGCTTTGGTCTTAGAAAGTTGAATGAAGTTGTTGGACTTTATGAAATGAATTAATGTTCAAACCCAAATGTAAGGTAGAGTGGTGAGAATAAATTAGATTTAGAACTTTTGGATTTTGAGTTATCTAACATCTCTACGTTAATTTGCTTGCAGAATTGAAATGGAAGAAGTTCAATTTGATCACGAATCAAAAGAGAAGATTTTTCAGATTTTTAAAGAGTTCATGGCTAGGTAACTTTAGTCCCACTGGTTTGATAAGATAGCATGAACTAAGAGAGTCTGCTGCCATTTTCTCAATTGCTTTTAAATGAAACAAAATTGTCAACTCCCTACTCGTTTGTATATTGGATGGTTTAGAGTTCTTTCGTATTACTCAAACTTACGTCTTATTTTGTTCCTCTTGATCAGAATTAAATGTTTGATATCATTAATTTTCTAGTGTTGCCAAGCTCGACGAATTGGGGACACTAGGAAGCCAGTTGCTATCTGGCCTTCGGCAAGGGCTTGGTTTGTGTCCTGCATCTGAAATAATACTTGTCTTTGCTTCTACTGTTTTGATGAAGTGTTGGTGTAGTGATTTGTTTTAACCATTGCAGAGCTTCTTCGACGACCTTCAATAAATGGAACATCAAAGTTGATTGAGAATGTCATTGAAATGAGTAATACGGAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGGCGCACAAAGTACAAAGAAGTGTATGTTTTACTTTTAAGTGAGCAAGTTGTTAATTCAATGCCTGCTTCGGTGAAGCCATTATCTTTATTTTCTTCTTTTGCGGTCTAACTACAATTTTTTCTCTTCACATACATAGTGCATACATGTCGGGTTGGACTGGATGATCATTTGAAAAAAGGTAAATAATATTTCTCTATCAAGATTGAAACCGTTTGCTATTTCGTAACAATACCCTCACACATTTGCTCGTCAATTTCGATACGCCTTGCACAACTTTTGTGTATATTTTGTCCCGTGTTCTCTGCCACATTCTTTTCCTCTTTGCTGTTCTCATTGAAAGATATTTTTTCATAATGATATCTAATTAATTCATGGGAACAAATAGCAAGGAGCCTAATCGACGAACTTGAGCGCCTGCATAATGATGTTAATATTGAACTGGAAACTGAAAACCCCCTGTGCAATTCAACAATGTCAGATGAAGATCTAGAATTGGATGAAGAAGAAGCAACTGTCCCTAGTAAGGTAACCTGCAACTTCCATTTTCTTTATGTTTCTTGTAATGGTTACTCTGAATTTTTGTCTATTGTTAGTTAGATGTTGAAGTTGTCGAGTCGGTTTACTGTTTAATCAATTTCCGCGTTTTCTTGTTCAGAAACCTGATGCTAATGATTATGCTGTATTAATGGGGATCGTCAAAGTTATGATCAAGAAAAACCACATAATGCAGGTAATAGTCTTCCATTTTTTGTTACCTTTCCACATGAACATAACATGCTATCGTTTTCAAACACCCACCTGCTGGCATGGTGTCTAGAGCGTATGTTTAGTTACAGTGATGGGAGTTCAATCCTACAATCCATAGTTTGTTGTTAATTTAATAGAAATGTCGTCAAAACTGAAACTTGCTGCAGGAGAAGATTATTTCGGGTTTAAGTCTCAAATCATCCTCGGGGGAACTCGAAACATATTGCCTAATGTGGTCGTTACAACCGTATATAGACGATGAAATTATGCGTTGGGCTTGGAAGCTTGTTTGATGAGTTGCCATTGCTGCAGTTAATCTTTTAAGCCAAAGTTTGGAGTTTCCTTTTGGATCAAAGTCATCTCCGGGAGCATTAAATTTTATGAGTGAATATTCCATGTAAACGTATTTGAAGGCATCCGATGTAAGTTCAATGTTCTGTATTTTTGAAACCATGTCAGATTTTGTAAATTTATGTGAAATGAATATCAATTATTATAATGTTTCAATGCAAGGTTTATGTATTAAATTAGTACTATGATTTAAATATTAATACCTTATAAATACTGCC GAGTTGTTTGGCCTCCGGCCGTCGTCTCCGGCAAATCTTCCGTGTCCGCCGGTTGCAGCAATACCGGCGAGTGGGTTACTGTTATCATCTCTCTCTCTCTATATATATATATATCGGCACTCGCACTGTCTCTCAGTTACTCTACTGCACAGCCTCCAGTCTATCGCCGCCGTCATTGCACGTCTGCGAAGGGTCGTCGCCGGTTTGGTATTTGTACGAATTGAAATGGAAGAAGTTCAATTTGATCACGAATCAAAAGAGAAGATTTTTCAGATTTTTAAAGAGTTCATGGCTAGTGTTGCCAAGCTCGACGAATTGGGGACACTAGGAAGCCAGTTGCTATCTGGCCTTCGGCAAGGGCTTGAGCTTCTTCGACGACCTTCAATAAATGGAACATCAAAGTTGATTGAGAATGTCATTGAAATGAGTAATACGGAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGGCGCACAAAGTACAAAGAAGTTGCATACATGTCGGGTTGGACTGGATGATCATTTGAAAAAAGCAAGGAGCCTAATCGACGAACTTGAGCGCCTGCATAATGATGTTAATATTGAACTGGAAACTGAAAACCCCCTGTGCAATTCAACAATGTCAGATGAAGATCTAGAATTGGATGAAGAAGAAGCAACTGTCCCTAGTAAGAAACCTGATGCTAATGATTATGCTGTATTAATGGGGATCGTCAAAGTTATGATCAAGAAAAACCACATAATGCAGGAGAAGATTATTTCGGGTTTAAGTCTCAAATCATCCTCGGGGGAACTCGAAACATATTGCCTAATGTGGTCGTTACAACCGTATATAGACGATGAAATTATGCGTTGGGCTTGGAAGCTTGTTTGATGAGTTGCCATTGCTGCAGTTAATCTTTTAAGCCAAAGTTTGGAGTTTCCTTTTGGATCAAAGTCATCTCCGGGAGCATTAAATTTTATGAGTGAATATTCCATGTAAACGTATTTGAAGGCATCCGATGTAAGTTCAATGTTCTGTATTTTTGAAACCATGTCAGATTTTGTAAATTTATGTGAAATGAATATCAATTATTATAATGTTTCAATGCAAGGTTTATGTATTAAATTAGTACTATGATTTAAATATTAATACCTTATAAATACTGCC ATGGAAGAAGTTCAATTTGATCACGAATCAAAAGAGAAGATTTTTCAGATTTTTAAAGAGTTCATGGCTAGTGTTGCCAAGCTCGACGAATTGGGGACACTAGGAAGCCAGTTGCTATCTGGCCTTCGGCAAGGGCTTGAGCTTCTTCGACGACCTTCAATAAATGGAACATCAAAGTTGATTGAGAATGTCATTGAAATGAGTAATACGGAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGGCGCACAAAGTACAAAGAAGTTGCATACATGTCGGGTTGGACTGGATGATCATTTGAAAAAAGCAAGGAGCCTAATCGACGAACTTGAGCGCCTGCATAATGATGTTAATATTGAACTGGAAACTGAAAACCCCCTGTGCAATTCAACAATGTCAGATGAAGATCTAGAATTGGATGAAGAAGAAGCAACTGTCCCTAGTAAGAAACCTGATGCTAATGATTATGCTGTATTAATGGGGATCGTCAAAGTTATGATCAAGAAAAACCACATAATGCAGGAGAAGATTATTTCGGGTTTAAGTCTCAAATCATCCTCGGGGGAACTCGAAACATATTGCCTAATGTGGTCGTTACAACCGTATATAGACGATGAAATTATGCGTTGGGCTTGGAAGCTTGTTTGA MEEVQFDHESKEKIFQIFKEFMASVAKLDELGTLGSQLLSGLRQGLELLRRPSINGTSKLIENVIEMSNTENLRSYIEAGCINTHDGAQSTKKLHTCRVGLDDHLKKARSLIDELERLHNDVNIELETENPLCNSTMSDEDLELDEEEATVPSKKPDANDYAVLMGIVKVMIKKNHIMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDEIMRWAWKLV*
BLAST of Cucsa.218790.1 vs. TrEMBL
Match: A0A0A0K2B6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G069170 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 3.2e-120 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of Cucsa.218790.1 vs. TrEMBL
Match: A0A061DIV6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000903 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 5.3e-59 Identity = 118/227 (51.98%), Postives = 166/227 (73.13%), Query Frame = 1
BLAST of Cucsa.218790.1 vs. TrEMBL
Match: F6HXI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g07870 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 8.8e-54 Identity = 110/234 (47.01%), Postives = 162/234 (69.23%), Query Frame = 1
BLAST of Cucsa.218790.1 vs. TrEMBL
Match: U5FJH7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s12700g PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 3.3e-53 Identity = 105/223 (47.09%), Postives = 162/223 (72.65%), Query Frame = 1
BLAST of Cucsa.218790.1 vs. TrEMBL
Match: A0A0D2TK23_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G232600 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 7.4e-53 Identity = 110/227 (48.46%), Postives = 157/227 (69.16%), Query Frame = 1
BLAST of Cucsa.218790.1 vs. TAIR10
Match: AT3G49645.1 (AT3G49645.1 unknown protein) HSP 1 Score: 205.3 bits (521), Expect = 3.9e-53 Identity = 105/214 (49.07%), Postives = 150/214 (70.09%), Query Frame = 1
BLAST of Cucsa.218790.1 vs. NCBI nr
Match: gi|778724692|ref|XP_004136915.2| (PREDICTED: uncharacterized protein LOC101209598 [Cucumis sativus]) HSP 1 Score: 439.1 bits (1128), Expect = 4.5e-120 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of Cucsa.218790.1 vs. NCBI nr
Match: gi|659110179|ref|XP_008455091.1| (PREDICTED: uncharacterized protein LOC103495347 isoform X2 [Cucumis melo]) HSP 1 Score: 417.2 bits (1071), Expect = 1.8e-113 Identity = 209/220 (95.00%), Postives = 214/220 (97.27%), Query Frame = 1
BLAST of Cucsa.218790.1 vs. NCBI nr
Match: gi|659110177|ref|XP_008455090.1| (PREDICTED: uncharacterized protein LOC103495347 isoform X1 [Cucumis melo]) HSP 1 Score: 402.1 bits (1032), Expect = 6.1e-109 Identity = 209/248 (84.27%), Postives = 214/248 (86.29%), Query Frame = 1
BLAST of Cucsa.218790.1 vs. NCBI nr
Match: gi|590706283|ref|XP_007047679.1| (Uncharacterized protein TCM_000903 [Theobroma cacao]) HSP 1 Score: 235.7 bits (600), Expect = 7.6e-59 Identity = 118/227 (51.98%), Postives = 166/227 (73.13%), Query Frame = 1
BLAST of Cucsa.218790.1 vs. NCBI nr
Match: gi|1009145595|ref|XP_015890421.1| (PREDICTED: uncharacterized protein LOC107425008 [Ziziphus jujuba]) HSP 1 Score: 225.7 bits (574), Expect = 7.9e-56 Identity = 117/230 (50.87%), Postives = 165/230 (71.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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