Cucsa.218430.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.218430.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Partner of Y14 and mago
Location	scaffold01658 : 535244 .. 546527 (-)
Sequence length	1188

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCACCGCCACCGCGTGCGTCTCTTCGCCCGTCTCTTCACACCAGCGCCGCCGCAACCTCCTCTACCGGACGACGACGACGACTGCCGCCGAACGATGCCGGTAAGTCTTTTTTCTCTTCTGTTCCTTCTCTCTGTCACGTTGTTCTCTCTAACTCTTTCCCGCAGCTTCATGGGCCAAACTAGGTGTGGAGTTTGCAATTTTCGTCTGAACTCCCTCTTTTGGGCCAAATACCCCTAGGTGAAAGAAATGTTGGATGTACTTATGTTTGCAATTCGTGTTCTGATTTATTTTAACTTAAATTATACTGAAAAAATCAAAATTTAGATACAAAAAATTTCTCATTTTTAATAAGAGTCTAAAGTGAGAGTGTAACAGGAAGAATGGTTTTAGTGTACAAGTCCTTCAAAACTAGTGAATGATCTGAACAATTACGTGTTTTTGTATGAAATTGAAGGATGAGTTGTTGAGGATATGAGGTTTTCCCCCTTTTTTGGATAAGAAACAGTTCATTGCTGAATGATATATCAAAAGCAGGAGAGGGCCATGATAGATACATAGAAACCTGAAAAAAGAGGAGGGGGAGCCCATGCATAAAGGTAAGCAAGCATTCATCAATCCTGAAAACAAGAACTAACAAAAATATGAAGAGCCTATTGGATGTTACATATGATAGGGTTTAGGGTTTTTTCCCCTTCAAGTTTTAGTTTTATTAGTAGCTTGATTAAGATTGGTGAGCATGCAAGAAAGTATAGGGTTCAAGAGCCTATTTGATGTTGCATATTATGGAAGCAAATCAGCATGATACTGTTTTGAATTGATGCAGAACATAATGCTAGGTTTTGAGCTTATTTTCCTCAAACTGCAAAGCTTGTTACTAACTTTTTTCTTTTTCATCTTTCAATTATGTATAGTTTTTCTTTTTTTATTTGTATGGCAAAATATTCTATACTATTCAAAATGAGGAGTGAGAATTTAAAAAATTCTATGGTTATGTCATATGGGGGTTGCAAACAATCAAAGTTATCTCACGTTATCTATGTGTCAAGTAAAGCCCTTATGCTCGTCATAATCAAAGATGATTTTGTTGGTCCGTCTTCACATATATATTTTCTTTTTATTTATTTTAATTAGTGATATCAATGCTCTGCAATAAGCATTACTTTTTATATAAAAAAACGTTTTCCATTTCTTAAATTTGTAATTTGAATTTTGATGATGGTTTCCTTTACTTTTCAGGATTGATGAATGGGTAGATCCTTAGGATCCTTGGGAAGAAGCTTTGGCTGGCTATTGAGGAATGTATGTGCGTAATCTTTCTTTGCATACATATTACTATGCTTTGGCTGTTTGGCAGTTGTGCTTTCTATTGTTTTGATTTTTCAATTCTGGAAGGTAGAGAGAGGCTTTTTTTTCTTATTTTTATTTTGGCTTGATTCTTTTTTCTTTTTAAAAAATACAGTGTCAATTTTTTTATTGATAAGGGGATTTATGGGTTTTCATATTTCGTTAGTTCTTGTTTCTGCCACTAGTCTACTTTACTAAAGTTTTTTATTAGCCAAGCAGGTAATTGTTATTTTAGATTGATCACTTTATCATATCTTATCTTTCTTTGATTATGCATCATGTCCCTAACAAAAACTCTTGTGAGTTCTTCACAAAGATGGTATATTATTACAGAATTAGGTTGTGCTTTTTTATTTTTTATTTTAGGATTTCTTTCTGTGTTATTACAAAATGATAGAAGTGAACTGAAAGGTCATGAAGTTCTAGAAATTGAATAAAAGGTTTGAACATGCCTATGTTTTTTGTTGATGTTGTGCTAATGTCAGCATTGTTATCGTTATGGGTTCAACCTCCATAAGGCCTTCAATGGATATAAGAAACTTCCAATACAAATGGACACTTAAGAGAATAACCACTTAGGATTTAGGAAGCATGTCATTTCCCTTGAATATAACTCTTTTTAGTTTTTGCCATCGTACATGACTTGCTCCAGTTTGGAGTAATTGACAAAATAAGGTGGAAATCTTTTTTGAATATGATATTGAATTTTTGCAGTTCAGCAATTAATTGCCTTTTAGGCGATGGGGAGTAGTGATGGAGGTGGAGAAGATCTGTGCAAGCAAATGACGGAGCTGAGCAAAACCCTAAAAGAAGGAGAAAGGATTCTAGCACCAACAAGGCGACCCGATGGTACTCTTCGAAAACCCATTCGGATTAGGGCCGGCTATGTTCCACAAGAAGAAGTCGCAATTTACCAGTCCAAAGGGGCTCTGGTATGTGTGCCTCTTGCGCATACATTATCTTCTTTCCATCTTTTCCTGCACTCTGTTGTTTCTCCTTCCTTTTGTATTGAGATATAGTTTGTTTGCCCTTTGTGCCTTGCTCATGAAAATTCATACTAGGAAAATGAAATCGCCCTTTGAGCTACCGTTGTGTTAATTTTTACTTTGGTGTGTTGTAAAGGACGAAGCAAAGGGCAAAGCAGAGTGCAATACAGTAGCCCATGACATTAGACAATCATTTCATTTGAGGAAATGCACAAAAGTAAAATAAAATATGTATGTACATGAATCGTGATGGAATAGTACTGTGAAAAATGAAAATTATGACATAATGGAAGTTAAAAGTCCTTTTCGGAAAATAATACCTCACGAGTGGGTTGGAGGCTTCTGAACCCATGATTTCTTAGAGAAAGTAGAGAGTGACTTAAAGGTTGAGCTATTGCTGATACTGGTGTAGTAAGTGCCTTTTTAACAATTTAATCAAAGATATGAGCATTTTTATGCCATACATTTCCTATATCTTTAATGAAAAGGAAGTATAGAGATTGTACATGCCTCTTGTTGATTCAATATAACTTTTGTTGATTCAATATAACTTAAGTCTACAATCACATCTCTTGAGCTGCCTCTTGTTAATCAGGCTCCCTCGATAGGAGGCCTATACATCATACAGGACTCATTGGAATTCTTGCATCATCCACAATTCAATATACAAATTGAAAATGAGGCAGATCACCCTCATTGACTTTTTTTTTTGTGCTTAAATTTAATCTTGGAGTGTGCTCATTTGTGCAGTCTATGGGGAAGAGGAACAGTAGGACCTTTAGACAAGTTGAGAGGGACTTTAACAACATATGGCCCCTCAATATGTTCAATGTTTATCTTAGATGCTGTGTCACCTTTTTTTTATAATAGTTACTTGTTAGGTCTCATTCTTCTTAATTATAGATCCCTTTTCCCTAGTAGGGCTTCTTGAGAAACCAAACCAACAGTTTTGTGGGTCAATTTTTTTCTCCGGTAAGATGATGATGATTGGCTGATACAATTCTAAACAAAAGAGATTTTAATATATGTTCTGGAAAATTGATGATTCAAGTGAAAGACATCAATTTCATTCTATTATTTTTCTGCTAGATGTTTAATTCCTATACTAGTGTATCCTAGAAGTCATCATTGTGGTATTCATTGGGATTACCTTTTTTCTGTGTGCTACAGTGGAAAAAGGAGATGGCATCGCACGATGGACCTCCTGGCTATGAACCTCCGACAACAGATGTAAAAACCAAGACCAAGTCAGCTAAGCGAAATGAGAGAAAGAAAGAGAAGCGACTGCAGGTTTGTCTTTCCCTTTGCTGGGATGGATATTTTATGTTTCTGATGACAGTTTAAATATTGTGGGGATTTCTTTTGAAGATCTTAATGGGAGTTAATTTTTTGTTTCTTTTCCCTGGGTAATATGGTCAACTGAATCTTAGAATCTCATGTGTGTCATTAAAAAGTCAGATGGTGAAACTCGTTCAAATGATATATGGCTGCGATGATTAGCCTCAAGTAAACCATGGCAACTTCTGGGAATAGAGTTTTCAGAAATTGAGTCGAGTTGTCGCATATAGTCTAAAGGTTCTAGAGTTTTATTTTAGACCTACAATTAACTTGTGATAGTTTTCATATAGGATTCTCTAAGTTGTCCCGTGAACAATTTTTTTGGGAGGACCATAAATTGAAGATTGCCATTAGTGTTCATATGCAATAAAATGTAGGACAAAATATAGGTAAATATATAAGAAACTACTTTTTTTTATCTCTTATCTATTTTCGACCATGGTTGTGACTTCTATCCTCCCATTATCACTTGGGGAATAAGATCATCCGTATTCAAATCGGCATGCTTTTCTATCTGAATAGTTGGTGTAGCTGGTGTAGCCTAAGTGACTAAAGGAGAGTGCTCTCCAATAACTCCATCTCAAATCTTTATTATGAATCAAAATGGTAATGAATATATGTGAGCAATTGGTGAACAAAGGCAAAGGAAAGTATTAAAAATGATGAAAAGATACTAAATGGGATTAATCAAGGATAATATTTAATCAACCACTAGTCCCTACTACATCAATAGTTAGAAAGATATTTTATCTGCATCTTTGGATTTTACCGTATGCAACTTAACCTTGTTTTTTTGAGAAAGGCATCTTATGATATAATAACTCACGGGTTGAGTTTATATTTTTATATTTGTGCTGGTTCTAACTTGACCATGATTTAGAGTCTAAGGATAGCTGTTTATTTATTTTCTAACAAAAAGCTTTTTTCTTCACTTTCCTTTTTCTCCAGGCAGCTCATGAGAAGGACAAAGTCTTGGAACAAGTGGTTGTTGAAGAGATCACTGAAGCGAAGGAAGCATATGTAGATAATAGGTTGGAACCCATCCAGTCATTAAGTTCCCAGATGAATGAACTTTCTGTTTCTACCAATCTGAAAGTTGAAAGCCCTTCTTCTGAGCCAATTGATGATCCACAGTTACCTTCCAGTGACCTTGACAAGAGAATTAGAGCAACTAAAAAGAAGGTGAGAACAAATTTGCCATGGTAGACTCTTGCTAATCATCTTTGCTTCAAAGTCTCGTGAAAAACTGTCAATCCATTGCATGCAAATATATGTTTAATAATATTTGAATTATGTTCAAAGTTTAAATGTCTTGATAAAGTCTTTTATGATACTAAAGTCCCTCTAGAGGACATGACTTGATAAAGGGCTAAGAGATCATGAGTTTTATCTATAGTGGCTATCTCCCTAGGATTTAATATTATTGAAAATAGAGACAACGAGTTCACACCAATTTACGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCTAGGATTCTAACAAGGAAAAAGCCTAGAAAAAAGGAAAGAATTCCAACAAAGCGAGTTTCCTTCTACATGGTTCTTAACTATCTCTCTCATAACAACTGAGTCAGGTCTACCACTGAAACTTTTTGTTATCTCCATGGAGTCCATTGCGTATCTTCCCATATAAATCCTAGTCATGCTTCAACCTCATACAATAAGTTCTCAGTCTGCTTTCCTCTTGCATCTTCCCACTTCGAGGTCTTGTTACCAAAGTTGATAGACCCTAAAAATTAAAGAGGTGGAAACATGAGTCCATAACGAATGATTAGGTTTCAAAAATCCAACATTGAGAAATCTTGAAATTCTTTCTCATCCTTTCCTAGTTGTATAAGTATTAGTTCTAGTTTTACAGTTAATAGTACAGGAAGAATATATTATATAACTGCCAAATTAGTTACAGCCCCCCAGACTATAGTTGGGGTTTGGGATAAGTTTTCAGACGGTTATTGTAGATGATTCTGGTGGTTGTTTGTTATTTGTAGAGATGTAGAAGTTGTTCAGCTTTTTTATATGTCGTTGAGTAAAAAGCTCTGATTCCTTTAAAAGGAAAAGTGCTTCCTCTTAAAGCACATCATGTTCGAATTGACGAAATTACTTTTGTTAATGCTAAGAACCATGAAAAATCTGAGTTCAAAATCATAAGGAAGTCTGCTTTCCAACATTTTCACTGTGCCTGATGAATCTTCTTCCTAGTCTCAGCATAGTTGGGAAGAAATCTAGTTGTAAGATTCAAAAGCCTATAATGTTATTTGTACTTGATGCAAGTACAACTTGTTTGAGAAATTCATCTGTTTTTGCAATATTAGAACTCAGTGCCAAAGCTTATAACAATCTAAGCTACCATTTACATAAACTTCTTTTAGTGAATTATGGGTAGCTTTGTTGAGAGCTAAAGATTTGAGTTTTTTTCTTCAAGTTTCTTTAGTCCGTCTTATGCATTACAACATCTTTTTGATAATTTTCCTTGCATTGTTCTCATGTTTGGATTTGCAGATTCGAATGGCAGAAGCTCAGTTGCAAAAAACACCACTTCAAGATATGAAGCCAGAGCAGGCGAACAAGTTATCGAAACTAGAAACTTGGCGCTCCGAACTAATGCTTCTAGAAGAACAAAGGCTAAAACTAAATTCTTCATCATGAATGAGAATGACTGCAGGCACAGCATCATTGTTCACTTTTATTTTTCCTTTATGATGAGAGAAAAAGAGACCAGAATTGCTGCAACAACCAAAAGGACTTCGATTTGCTTTTTCGAAAATCTAATCATCTGTAAAACTCTACTCGTGTGTAATTGCATTTTATTCAAACGTTTTAGCAACTCCTTGAAACTGTAGATAGTTTTGGAGACATTGATTTTCTTTTGCCTCTAAACATATGATTTATTTATGTGATTTCCAATCATAACGATGAACCAAATACTTTGGCTTATCAAATTTAGAAAAATA

mRNA sequence

GCCACCGCCACCGCGTGCGTCTCTTCGCCCGTCTCTTCACACCAGCGCCGCCGCAACCTCCTCTACCGGACGACGACGACGACTGCCGCCGAACGATGCCGGATTGATGAATGGGTAGATCCTTAGGATCCTTGGGAAGAAGCTTTGGCTGGCTATTGAGGAATTTCAGCAATTAATTGCCTTTTAGGCGATGGGGAGTAGTGATGGAGGTGGAGAAGATCTGTGCAAGCAAATGACGGAGCTGAGCAAAACCCTAAAAGAAGGAGAAAGGATTCTAGCACCAACAAGGCGACCCGATGGTACTCTTCGAAAACCCATTCGGATTAGGGCCGGCTATGTTCCACAAGAAGAAGTCGCAATTTACCAGTCCAAAGGGGCTCTGTGGAAAAAGGAGATGGCATCGCACGATGGACCTCCTGGCTATGAACCTCCGACAACAGATGTAAAAACCAAGACCAAGTCAGCTAAGCGAAATGAGAGAAAGAAAGAGAAGCGACTGCAGGCAGCTCATGAGAAGGACAAAGTCTTGGAACAAGTGGTTGTTGAAGAGATCACTGAAGCGAAGGAAGCATATGTAGATAATAGGTTGGAACCCATCCAGTCATTAAGTTCCCAGATGAATGAACTTTCTGTTTCTACCAATCTGAAAGTTGAAAGCCCTTCTTCTGAGCCAATTGATGATCCACAGTTACCTTCCAGTGACCTTGACAAGAGAATTAGAGCAACTAAAAAGAAGATTCGAATGGCAGAAGCTCAGTTGCAAAAAACACCACTTCAAGATATGAAGCCAGAGCAGGCGAACAAGTTATCGAAACTAGAAACTTGGCGCTCCGAACTAATGCTTCTAGAAGAACAAAGGCTAAAACTAAATTCTTCATCATGAATGAGAATGACTGCAGGCACAGCATCATTGTTCACTTTTATTTTTCCTTTATGATGAGAGAAAAAGAGACCAGAATTGCTGCAACAACCAAAAGGACTTCGATTTGCTTTTTCGAAAATCTAATCATCTGTAAAACTCTACTCGTGTGTAATTGCATTTTATTCAAACGTTTTAGCAACTCCTTGAAACTGTAGATAGTTTTGGAGACATTGATTTTCTTTTGCCTCTAAACATATGATTTATTTATGTGATTTCCAATCATAACGATGAACCAAATACTTTGGCTTATCAAATTTAGAAAAATA

Coding sequence (CDS)

ATGGGGAGTAGTGATGGAGGTGGAGAAGATCTGTGCAAGCAAATGACGGAGCTGAGCAAAACCCTAAAAGAAGGAGAAAGGATTCTAGCACCAACAAGGCGACCCGATGGTACTCTTCGAAAACCCATTCGGATTAGGGCCGGCTATGTTCCACAAGAAGAAGTCGCAATTTACCAGTCCAAAGGGGCTCTGTGGAAAAAGGAGATGGCATCGCACGATGGACCTCCTGGCTATGAACCTCCGACAACAGATGTAAAAACCAAGACCAAGTCAGCTAAGCGAAATGAGAGAAAGAAAGAGAAGCGACTGCAGGCAGCTCATGAGAAGGACAAAGTCTTGGAACAAGTGGTTGTTGAAGAGATCACTGAAGCGAAGGAAGCATATGTAGATAATAGGTTGGAACCCATCCAGTCATTAAGTTCCCAGATGAATGAACTTTCTGTTTCTACCAATCTGAAAGTTGAAAGCCCTTCTTCTGAGCCAATTGATGATCCACAGTTACCTTCCAGTGACCTTGACAAGAGAATTAGAGCAACTAAAAAGAAGATTCGAATGGCAGAAGCTCAGTTGCAAAAAACACCACTTCAAGATATGAAGCCAGAGCAGGCGAACAAGTTATCGAAACTAGAAACTTGGCGCTCCGAACTAATGCTTCTAGAAGAACAAAGGCTAAAACTAAATTCTTCATCATGA

Protein sequence

MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEEITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS*

Homology

[Close]

BLAST of Cucsa.218430.1 vs. Swiss-Prot
Match: PYM1_DANRE (Partner of Y14 and mago OS=Danio rerio GN=pym1 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 69/207 (33.33%), Postives = 103/207 (49.76%), Query Frame = 1


Query: 24  EGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGY---EP 83
           E  + +A T+RPDG+ RKP R+R GYVPQEEV +Y++K   + K  +  + PPG     P
Sbjct: 9   ESGKYIAATQRPDGSWRKPRRVRDGYVPQEEVPVYENKFVKFFK--SKPELPPGVCVETP 68

Query: 84  PTT-----DVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEEITEAKEAYVDNRLEP 143
           P T     D    +++AKRN ++KEKR Q   E     E     E+    E         
Sbjct: 69  PQTQTQPSDAAGLSRTAKRNMKRKEKRRQQGQETKSEPELQPEPELQPEPEP-------- 128

Query: 144 IQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATKKKIRMAEAQLQKTPL 203
            Q LS QM +L +S +   + P           ++D  +R++  +KK+R  E   Q+   
Sbjct: 129 -QGLSQQMQQLELSAS---QGPG----------AADSARRLKNLRKKLRQVEELQQRVLS 188

Query: 204 QDMKP--EQANKLSKLETWRSELMLLE 221
            ++KP  EQ +KL + +  R EL  LE
Sbjct: 189 GELKPSQEQLDKLGRAQALREELQQLE 191

[Close]

BLAST of Cucsa.218430.1 vs. Swiss-Prot
Match: PYM1A_SALSA (Partner of Y14 and mago A OS=Salmo salar GN=pym1a PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15
Identity = 67/216 (31.02%), Postives = 100/216 (46.30%), Query Frame = 1


Query: 27  RILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGYEP------ 86
           + +A T+RPDGT RKP R++ GY PQEEV +Y++K   + K     D PPG  P      
Sbjct: 12  KYIAATQRPDGTWRKPRRVKDGYTPQEEVPVYENKFVKFFK--GKPDLPPGMSPGNAAQA 71

Query: 87  ---------PTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEEITEAKEAYVDN 146
                       ++   +K+AKRN ++KEKR Q   + +  L    VE +T A++   DN
Sbjct: 72  RQQQGIPGIAENEIAGLSKTAKRNMKRKEKRKQQGPDSNVELLTNAVETMTFAEDG--DN 131

Query: 147 RLEPIQSLSSQMNELSVSTNLKVESPSSEPID---DPQLPSSDLDKRIRATKKKIRMAEA 206
                                   +P+S P     DP    ++  K+I+  KKK+R  E 
Sbjct: 132 -----------------------VTPASNPAGATYDPSSAIAEKAKKIKNIKKKLRQVEE 191

Query: 207 QLQKTPLQDMK---PEQANKLSKLETWRSELMLLEE 222
             QK    ++K    EQ  KL + +  + EL+ LEE
Sbjct: 192 LQQKLDSGEIKQATKEQQEKLGRAKALQGELLQLEE 200

[Close]

BLAST of Cucsa.218430.1 vs. Swiss-Prot
Match: PYM1_XENTR (Partner of Y14 and mago OS=Xenopus tropicalis GN=pym1 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13
Identity = 65/212 (30.66%), Postives = 99/212 (46.70%), Query Frame = 1


Query: 24  EGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPG------ 83
           E  + +A T+RPDG+ RK  +++ GYVPQEEV +Y++K   + K   S   PPG      
Sbjct: 9   ESGKYIAATQRPDGSWRKQRKVKEGYVPQEEVPVYENKYVKFFKSKPSL--PPGLSETDA 68

Query: 84  -----YEPPTTDVKTK-TKSAKRNERKKEKRLQAAHEKDKVLEQVVVEEITEAKEAYVDN 143
                 +P   D  T  +K+AKRN ++KEKR Q   E+++V            ++A  D 
Sbjct: 69  STGKTQQPSKPDADTTLSKTAKRNMKRKEKRKQEKGEREQV------------EDARQDL 128

Query: 144 RLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATKKKIRMAEAQLQ 203
               I     Q N  S   N    S +         P+++  K+I+  +KK+R  E   Q
Sbjct: 129 ERVNISETPVQKNLTSAHKNGSASSDN---------PAAEKAKKIKNLRKKLRQVEELQQ 188

Query: 204 KTPLQDMK---PEQANKLSKLETWRSELMLLE 221
           K    ++K    EQ  KLS+ +    E+  LE
Sbjct: 189 KIDSGEIKEPSKEQLEKLSRRKALEEEIEDLE 197

[Close]

BLAST of Cucsa.218430.1 vs. Swiss-Prot
Match: PYM1_HUMAN (Partner of Y14 and mago OS=Homo sapiens GN=PYM1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-13
Identity = 65/220 (29.55%), Postives = 99/220 (45.00%), Query Frame = 1


Query: 19  SKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGY 78
           S    E  + +A T+RPDGT RK  R++ GYVPQEEV +Y++K   + K  +  + PPG 
Sbjct: 6   SPAATETGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFK--SKPELPPGL 65

Query: 79  EPPTTDVKTK----------TKSAKRNERKKEKRLQ-----AAHEKDKVLEQVVVEEITE 138
            P  T   T           +K+AKRN ++KEKR Q      A    + L++V +EE  +
Sbjct: 66  SPEATAPVTPSRPEGGEPGLSKTAKRNLKRKEKRRQQQEKGEAEALSRTLDKVSLEETAQ 125

Query: 139 AKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATKKKI 198
              A   +R  P                    + S +P       +++  K+I+  KKK+
Sbjct: 126 LPSAPQGSRAAP-------------------TAASDQP---DSAATTEKAKKIKNLKKKL 185

Query: 199 RMAE---AQLQKTPLQDMKPEQANKLSKLETWRSELMLLE 221
           R  E    ++Q   +     EQ  KL++      EL  LE
Sbjct: 186 RQVEELQQRIQAGEVSQPSKEQLEKLARRRALEEELEDLE 201

[Close]

BLAST of Cucsa.218430.1 vs. Swiss-Prot
Match: PYM1_BOVIN (Partner of Y14 and mago OS=Bos taurus GN=PYM1 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.9e-13
Identity = 65/218 (29.82%), Postives = 99/218 (45.41%), Query Frame = 1


Query: 21  TLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGYEP 80
           T + G + +A T+RPDGT RK  R++ GYVPQEEV +Y++K   + K  +  + PPG  P
Sbjct: 7   TDETGGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFK--SKPELPPGLSP 66

Query: 81  PTTDVKTK----------TKSAKRNERKKEKRLQ-----AAHEKDKVLEQVVVEEITEAK 140
             T   T           +K+AKRN ++KEKR Q      A    + LE+V + E  +  
Sbjct: 67  EATAPITASRPEGGEPALSKTAKRNLKRKEKRRQQQEKGEAEALSRTLEKVSLGETAQVP 126

Query: 141 EAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATKKKIRM 200
            A   +R  P                    + S +P       +++  K+I+  KKK+R 
Sbjct: 127 SAPQASRAAP-------------------TAASDQP---DSAATTEKAKKIKNLKKKLRQ 186

Query: 201 AE---AQLQKTPLQDMKPEQANKLSKLETWRSELMLLE 221
            E    ++Q   +     EQ  KL++      EL  LE
Sbjct: 187 VEELQQRIQAGEISQPSKEQLEKLARRRALEEELEDLE 200

[Close]

BLAST of Cucsa.218430.1 vs. TrEMBL
Match: A0A0A0K274_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066320 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 4.9e-124
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60
           MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS
Sbjct: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120
           KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE
Sbjct: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120

Query: 121 ITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180
           ITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK
Sbjct: 121 ITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180

Query: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 231
           KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS
Sbjct: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 230

[Close]

BLAST of Cucsa.218430.1 vs. TrEMBL
Match: A0A061DXF2_THECC (Partner of Y14-MAGO isoform 1 OS=Theobroma cacao GN=TCM_006420 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 7.5e-72
Identity = 153/230 (66.52%), Postives = 173/230 (75.22%), Query Frame = 1


Query: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60
           M S++GGGE+   +M ELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS
Sbjct: 1   MASNNGGGEEQLTKMAELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120
           KGALWKKEMAS  GPPGY+ P  D K KTKSAKRNERKKEKRLQAA EK K LE    +E
Sbjct: 61  KGALWKKEMASQVGPPGYD-PAMDTKPKTKSAKRNERKKEKRLQAALEKGKNLEAEADDE 120

Query: 121 I--TEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPI--DDPQLPSSDLDKRI 180
           I   +  E   D+  E ++SL+SQM EL+VS N    SP S  +   D   P  DLDK+I
Sbjct: 121 IKKEDVPEEDSDHGSESVKSLTSQMTELAVSENPVPTSPPSNSVQASDADAPVQDLDKKI 180

Query: 181 RATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKL 227
           RA KKKIR+ EAQ QKTP QDMKPEQ  KL+KLE WR EL LLE+++ +L
Sbjct: 181 RALKKKIRLTEAQQQKTPQQDMKPEQLEKLAKLEGWRQELKLLEDKKAEL 229

[Close]

BLAST of Cucsa.218430.1 vs. TrEMBL
Match: A0A0B0MUI6_GOSAR (Partner of Y14 and mago OS=Gossypium arboreum GN=F383_03167 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-70
Identity = 149/227 (65.64%), Postives = 171/227 (75.33%), Query Frame = 1


Query: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60
           M S++GGGE   K+  EL K LKEGERIL P+RRPDGTLRKP+RIRAGYVPQEEVAIYQS
Sbjct: 1   MASNNGGGEQQSKKTAELGKPLKEGERILEPSRRPDGTLRKPVRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120
           KGALWKKEMAS  GPPGY+PP TD K KTKSAKRNERKKEKR+QAA EK K  E V  +E
Sbjct: 61  KGALWKKEMASQVGPPGYDPP-TDTKLKTKSAKRNERKKEKRVQAALEKGKNSEAVAGDE 120

Query: 121 I--TEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPID--DPQLPSSDLDKRI 180
           I      E  +D+  E I+SL+SQM +L+V  NL   SP S  +D  D   P+ DLDK+I
Sbjct: 121 IKGDGLTEEDLDHGSESIKSLTSQMTDLAVFQNLVSTSPLSNSVDASDAVTPAQDLDKKI 180

Query: 181 RATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQR 224
           RA KKKIR+ EAQ QKTP QDMKPEQ  KL+KLE WR EL LLE+++
Sbjct: 181 RALKKKIRLVEAQQQKTPQQDMKPEQLEKLAKLEGWREELKLLEDKK 226

[Close]

BLAST of Cucsa.218430.1 vs. TrEMBL
Match: A0A0B0Q2W2_GOSAR (Partner of Y14 and mago OS=Gossypium arboreum GN=F383_10526 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-68
Identity = 148/230 (64.35%), Postives = 175/230 (76.09%), Query Frame = 1


Query: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60
           M S++ GGE+  ++M ELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS
Sbjct: 1   MASNNVGGEEQLQKMAELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120
           KGALWKKEMAS   PPGY+PP  D K KTKSAKRNERKKEKRLQAA EK K LE+V  +E
Sbjct: 61  KGALWKKEMASQVVPPGYDPP-ADAKPKTKSAKRNERKKEKRLQAALEKGKNLEEVSDDE 120

Query: 121 I--TEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPID--DPQLPSSDLDKRI 180
               +  E  +D   + ++SL+SQM++L+ S+N    SP S  ++  D   P  DLDK+I
Sbjct: 121 TKREDVPEEDLDGS-KSVKSLTSQMSDLAFSSNPVSTSPPSNTVEASDAGAPVLDLDKKI 180

Query: 181 RATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKL 227
           RA KKK+R+AEAQ QKTP QDMKPEQ  KL+K+E WR EL  LE Q+ +L
Sbjct: 181 RALKKKVRLAEAQQQKTPQQDMKPEQLEKLAKVEGWREELKFLEGQKAEL 228

[Close]

BLAST of Cucsa.218430.1 vs. TrEMBL
Match: A5BFF8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01010 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.9e-68
Identity = 145/235 (61.70%), Postives = 180/235 (76.60%), Query Frame = 1


Query: 1   MGSSDGG-GEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQ 60
           M  SDG  GE+  KQ+ ELSK+LKEGER+LAPTRRPDGTLRKPIRIRAGYVPQ+EVAIYQ
Sbjct: 1   MAGSDGREGEEELKQLAELSKSLKEGERLLAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQ 60

Query: 61  SKGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVE 120
           SKGALW+KEMAS +GPPGY+PP TD K KTKS KRNERKKEKRLQAA +K K LEQ+V  
Sbjct: 61  SKGALWRKEMASQEGPPGYDPP-TDAKPKTKSVKRNERKKEKRLQAALDKGKNLEQMVDG 120

Query: 121 EITE---AKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPID--DPQLPSSDLDK 180
           E+ +        V++  E ++S++SQMNEL+V+ N    +P SE I+  +P   + D+DK
Sbjct: 121 EVNQDGVLSAEDVNHGSEFVESVASQMNELTVTENPTTVTPPSESIECLNPGGAAPDIDK 180

Query: 181 RIRATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSS 230
           RIRA KKKIR+ EAQ QK   Q+MKPEQ +K+ KLE W+ EL LLE+++ +L +S
Sbjct: 181 RIRALKKKIRLTEAQQQKASQQEMKPEQLDKMMKLEGWQKELKLLEDKKAELAAS 234

[Close]

BLAST of Cucsa.218430.1 vs. TAIR10
Match: AT1G11400.1 (AT1G11400.1 partner of Y14-MAGO)

HSP 1 Score: 204.5 bits (519), Expect = 6.9e-53
Identity = 120/222 (54.05%), Postives = 143/222 (64.41%), Query Frame = 1


Query: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60
           MGS  G   +  K+M ELSK LKEGERIL PTRRPDGTLRKPIRIR GY P++EV  YQS
Sbjct: 1   MGSRSG---EQGKRMAELSKNLKEGERILEPTRRPDGTLRKPIRIRPGYTPEDEVVKYQS 60

Query: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120
           KG+L KKEMAS  GPPGYEP     K KTK+AKRNERKKEKRLQA  EK           
Sbjct: 61  KGSLMKKEMAS-QGPPGYEPDPAP-KPKTKAAKRNERKKEKRLQATAEK----------- 120

Query: 121 ITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180
              +++    N  + +  L+S+M  L VS+N  V   +     +P     D++KRIRA K
Sbjct: 121 ANSSEDGSASNGSQSVNVLASEMEALDVSSNNDVCGGA----PNPGTTGEDVEKRIRALK 180

Query: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQ 223
           KKIR+ EAQ QKT  +D+ PEQ  K SKLE WR EL  LE++
Sbjct: 181 KKIRLTEAQQQKTASRDLNPEQLEKFSKLEEWRQELKALEDK 202

[Close]

BLAST of Cucsa.218430.1 vs. NCBI nr
Match: gi|778724586|ref|XP_011658835.1| (PREDICTED: partner of Y14 and mago-like isoform X2 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 7.1e-124
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60
           MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS
Sbjct: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120
           KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE
Sbjct: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120

Query: 121 ITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180
           ITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK
Sbjct: 121 ITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180

Query: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 231
           KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS
Sbjct: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 230

[Close]

BLAST of Cucsa.218430.1 vs. NCBI nr
Match: gi|778724564|ref|XP_011658831.1| (PREDICTED: partner of Y14 and mago-like isoform X1 [Cucumis sativus])

HSP 1 Score: 447.2 bits (1149), Expect = 1.7e-122
Identity = 230/231 (99.57%), Postives = 230/231 (99.57%), Query Frame = 1


Query: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60
           MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS
Sbjct: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQ-AAHEKDKVLEQVVVE 120
           KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQ AAHEKDKVLEQVVVE
Sbjct: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120

Query: 121 EITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180
           EITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT
Sbjct: 121 EITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180

Query: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 231
           KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS
Sbjct: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 231

[Close]

BLAST of Cucsa.218430.1 vs. NCBI nr
Match: gi|659110243|ref|XP_008455125.1| (PREDICTED: partner of Y14 and mago isoform X2 [Cucumis melo])

HSP 1 Score: 438.7 bits (1127), Expect = 6.2e-120
Identity = 224/230 (97.39%), Postives = 227/230 (98.70%), Query Frame = 1


Query: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60
           MGSSDGGGEDL KQMTELSKTLKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVAIYQS
Sbjct: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120
           KGALWKKEMASHDGPPGY+PP TDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE
Sbjct: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120

Query: 121 ITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180
           ITEAKEAYVDNRLE IQSLSSQMNEL+VSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK
Sbjct: 121 ITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATK 180

Query: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 231
           KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS
Sbjct: 181 KKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 230

[Close]

BLAST of Cucsa.218430.1 vs. NCBI nr
Match: gi|659110235|ref|XP_008455121.1| (PREDICTED: partner of Y14 and mago isoform X1 [Cucumis melo])

HSP 1 Score: 434.1 bits (1115), Expect = 1.5e-118
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 1


Query: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60
           MGSSDGGGEDL KQMTELSKTLKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVAIYQS
Sbjct: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQ-AAHEKDKVLEQVVVE 120
           KGALWKKEMASHDGPPGY+PP TDVKTKTKSAKRNERKKEKRLQ AAHEKDKVLEQVVVE
Sbjct: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120

Query: 121 EITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180
           EITEAKEAYVDNRLE IQSLSSQMNEL+VSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT
Sbjct: 121 EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180

Query: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 231
           KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS
Sbjct: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 231

[Close]

BLAST of Cucsa.218430.1 vs. NCBI nr
Match: gi|590683268|ref|XP_007041554.1| (Partner of Y14-MAGO isoform 1 [Theobroma cacao])

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-71
Identity = 153/230 (66.52%), Postives = 173/230 (75.22%), Query Frame = 1


Query: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60
           M S++GGGE+   +M ELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS
Sbjct: 1   MASNNGGGEEQLTKMAELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQAAHEKDKVLEQVVVEE 120
           KGALWKKEMAS  GPPGY+ P  D K KTKSAKRNERKKEKRLQAA EK K LE    +E
Sbjct: 61  KGALWKKEMASQVGPPGYD-PAMDTKPKTKSAKRNERKKEKRLQAALEKGKNLEAEADDE 120

Query: 121 I--TEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPI--DDPQLPSSDLDKRI 180
           I   +  E   D+  E ++SL+SQM EL+VS N    SP S  +   D   P  DLDK+I
Sbjct: 121 IKKEDVPEEDSDHGSESVKSLTSQMTELAVSENPVPTSPPSNSVQASDADAPVQDLDKKI 180

Query: 181 RATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKL 227
           RA KKKIR+ EAQ QKTP QDMKPEQ  KL+KLE WR EL LLE+++ +L
Sbjct: 181 RALKKKIRLTEAQQQKTPQQDMKPEQLEKLAKLEGWRQELKLLEDKKAEL 229

The following BLAST results are available for this feature:

BLAST of Cucsa.218430.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PYM1_DANRE	1.5e-17	33.33	Partner of Y14 and mago OS=Danio rerio GN=pym1 PE=2 SV=1	[more]
PYM1A_SALSA	1.4e-15	31.02	Partner of Y14 and mago A OS=Salmo salar GN=pym1a PE=2 SV=1	[more]
PYM1_XENTR	1.3e-13	30.66	Partner of Y14 and mago OS=Xenopus tropicalis GN=pym1 PE=2 SV=1	[more]
PYM1_HUMAN	3.0e-13	29.55	Partner of Y14 and mago OS=Homo sapiens GN=PYM1 PE=1 SV=1	[more]
PYM1_BOVIN	3.9e-13	29.82	Partner of Y14 and mago OS=Bos taurus GN=PYM1 PE=2 SV=1	[more]

BLAST of Cucsa.218430.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K274_CUCSA	4.9e-124	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066320 PE=4 SV=1	[more]
A0A061DXF2_THECC	7.5e-72	66.52	Partner of Y14-MAGO isoform 1 OS=Theobroma cacao GN=TCM_006420 PE=4 SV=1	[more]
A0A0B0MUI6_GOSAR	2.4e-70	65.64	Partner of Y14 and mago OS=Gossypium arboreum GN=F383_03167 PE=4 SV=1	[more]
A0A0B0Q2W2_GOSAR	1.3e-68	64.35	Partner of Y14 and mago OS=Gossypium arboreum GN=F383_10526 PE=4 SV=1	[more]
A5BFF8_VITVI	2.9e-68	61.70	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01010 PE=4 SV=...	[more]

BLAST of Cucsa.218430.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11400.1	6.9e-53	54.05	partner of Y14-MAGO	[more]

BLAST of Cucsa.218430.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724586\|ref\|XP_011658835.1\|	7.1e-124	100.00	PREDICTED: partner of Y14 and mago-like isoform X2 [Cucumis sativus]	[more]
gi\|778724564\|ref\|XP_011658831.1\|	1.7e-122	99.57	PREDICTED: partner of Y14 and mago-like isoform X1 [Cucumis sativus]	[more]
gi\|659110243\|ref\|XP_008455125.1\|	6.2e-120	97.39	PREDICTED: partner of Y14 and mago isoform X2 [Cucumis melo]	[more]
gi\|659110235\|ref\|XP_008455121.1\|	1.5e-118	96.97	PREDICTED: partner of Y14 and mago isoform X1 [Cucumis melo]	[more]
gi\|590683268\|ref\|XP_007041554.1\|	1.1e-71	66.52	Partner of Y14-MAGO isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR015362	WIBG_mago-bd

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0031981	nuclear lumen
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.218430	Cucsa.218430	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.218430.1	Cucsa.218430.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.218430.1.CDS.4	Cucsa.218430.1.CDS.4	CDS
Cucsa.218430.1.CDS.3	Cucsa.218430.1.CDS.3	CDS
Cucsa.218430.1.CDS.2	Cucsa.218430.1.CDS.2	CDS
Cucsa.218430.1.CDS.1	Cucsa.218430.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.218430.1.three_prime_UTR.1	Cucsa.218430.1.three_prime_UTR.1	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.218430.1.five_prime_UTR.3	Cucsa.218430.1.five_prime_UTR.3	five_prime_UTR
Cucsa.218430.1.five_prime_UTR.2	Cucsa.218430.1.five_prime_UTR.2	five_prime_UTR
Cucsa.218430.1.five_prime_UTR.1	Cucsa.218430.1.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015362	WIBG family	PFAM	PF09282	Mago-bind	coord: 25..51 score: 7.9
IPR015362	WIBG family	SMART	SM01273	Mago_bind_2	coord: 25..51 score: 2.1
IPR015362	WIBG family	unknown	SSF101931	Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain	coord: 23..51 score: 1.4
None	No IPR available	unknown	Coil	Coil	coord: 169..189 score: -coord: 209..229 scor
None	No IPR available	PANTHER	PTHR22959	PYM PROTEIN	coord: 4..229 score: 1.4
None	No IPR available	PANTHER	PTHR22959:SF0	PARTNER OF Y14 AND MAGO	coord: 4..229 score: 1.4