Cucsa.205200.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACACGAACTCACAACCAGTCAAACCCAACTCCAGCTCCGGCAATACAAAAACCACAAGCCGCAACGGCGCCGTGAAAATTTTCAAGGTTGCGCTCTTCATGATCCGTCGTCGTCACTCCAAGAAaCCAAAAGCGTCTGTCGACATGGGCGCTGATAAGGGCTTGTGGCGGCGGCTGTTGGGTTCCATACGCCCTCTCCACATCCATGGGAACGAACCACCACCAACTGCTGCTAGAGATATGTCGTTGCCTCCATCGAAACCAAAGGAAGATTTCGAGGAGGCACTAATGCCATTGCCGTCACATTCCACTTCACCATCATCGTCGTCACTTTCTCGTACGTCGAGGTCATCTTCTTTTGGCACAAGCCAATACGCCTCTGCCAGCAGCCTTCAAGAATTTGACGATAATACGGATGGAGACGATGATGAAAATGAGATTCATGAGGACAATGGAGGCGACGAGATGATTGATGCGAAAGCAGAAGAGTTTATTGCACAATTTTATGAGCAAATGAGGCGTCAACGCTACAATAACTATTAA ATGGACACGAACTCACAACCAGTCAAACCCAACTCCAGCTCCGGCAATACAAAAACCACAAGCCGCAACGGCGCCGTGAAAATTTTCAAGGTTGCGCTCTTCATGATCCGTCGTCGTCACTCCAAGAAACCAAAAGCGTCTGTCGACATGGGCGCTGATAAGGGCTTGTGGCGGCGGCTGTTGGGTTCCATACGCCCTCTCCACATCCATGGGAACGAACCACCACCAACTGCTGCTAGAGATATGTCGTTGCCTCCATCGAAACCAAAGGAAGATTTCGAGGAGGCACTAATGCCATTGCCGTCACATTCCACTTCACCATCATCGTCGTCACTTTCTCGTACGTCGAGGTCATCTTCTTTTGGCACAAGCCAATACGCCTCTGCCAGCAGCCTTCAAGAATTTGACGATAATACGGATGGAGACGATGATGAAAATGAGATTCATGAGGACAATGGAGGCGACGAGATGATTGATGCGAAAGCAGAAGAGTTTATTGCACAATTTTATGAGCAAATGAGGCGTCAACGCTACAATAACTATTAA ATGGACACGAACTCACAACCAGTCAAACCCAACTCCAGCTCCGGCAATACAAAAACCACAAGCCGCAACGGCGCCGTGAAAATTTTCAAGGTTGCGCTCTTCATGATCCGTCGTCGTCACTCCAAGAAaCCAAAAGCGTCTGTCGACATGGGCGCTGATAAGGGCTTGTGGCGGCGGCTGTTGGGTTCCATACGCCCTCTCCACATCCATGGGAACGAACCACCACCAACTGCTGCTAGAGATATGTCGTTGCCTCCATCGAAACCAAAGGAAGATTTCGAGGAGGCACTAATGCCATTGCCGTCACATTCCACTTCACCATCATCGTCGTCACTTTCTCGTACGTCGAGGTCATCTTCTTTTGGCACAAGCCAATACGCCTCTGCCAGCAGCCTTCAAGAATTTGACGATAATACGGATGGAGACGATGATGAAAATGAGATTCATGAGGACAATGGAGGCGACGAGATGATTGATGCGAAAGCAGAAGAGTTTATTGCACAATTTTATGAGCAAATGAGGCGTCAACGCTACAATAACTATTAA MDTNSQPVKPNSSSGNTKTTSRNGAVKIFKVALFMIRRRHSKKPKASVDMGADKGLWRRLLGSIRPLHIHGNEPPPTAARDMSLPPSKPKEDFEEALMPLPSHSTSPSSSSLSRTSRSSSFGTSQYASASSLQEFDDNTDGDDDENEIHEDNGGDEMIDAKAEEFIAQFYEQMRRQRYNNY*
BLAST of Cucsa.205200.1 vs. TrEMBL
Match: A0A0A0KB64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407000 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 9.6e-99 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. TrEMBL
Match: W9RL15_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007455 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.7e-23 Identity = 74/187 (39.57%), Postives = 109/187 (58.29%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. TrEMBL
Match: A0A059AXK3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01069 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.3e-22 Identity = 71/182 (39.01%), Postives = 105/182 (57.69%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. TrEMBL
Match: F6HZ85_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01130 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-20 Identity = 68/165 (41.21%), Postives = 99/165 (60.00%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. TrEMBL
Match: A0A0V0HN63_SOLCH (Putative WASH complex subunit CCDC53-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.2e-20 Identity = 69/187 (36.90%), Postives = 101/187 (54.01%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. TAIR10
Match: AT4G02160.1 (AT4G02160.1 unknown protein) HSP 1 Score: 97.8 bits (242), Expect = 7.2e-21 Identity = 64/162 (39.51%), Postives = 82/162 (50.62%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. TAIR10
Match: AT5G61710.1 (AT5G61710.1 unknown protein) HSP 1 Score: 70.1 bits (170), Expect = 1.6e-12 Identity = 55/160 (34.38%), Postives = 78/160 (48.75%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. NCBI nr
Match: gi|778728194|ref|XP_011659385.1| (PREDICTED: uncharacterized protein LOC105436176 [Cucumis sativus]) HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. NCBI nr
Match: gi|659101260|ref|XP_008451512.1| (PREDICTED: uncharacterized protein LOC103492774 [Cucumis melo]) HSP 1 Score: 285.8 bits (730), Expect = 5.3e-74 Identity = 152/184 (82.61%), Postives = 160/184 (86.96%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. NCBI nr
Match: gi|703125764|ref|XP_010103386.1| (hypothetical protein L484_007455 [Morus notabilis]) HSP 1 Score: 117.5 bits (293), Expect = 2.5e-23 Identity = 74/187 (39.57%), Postives = 109/187 (58.29%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. NCBI nr
Match: gi|697167744|ref|XP_009592738.1| (PREDICTED: uncharacterized protein LOC104089519 [Nicotiana tomentosiformis]) HSP 1 Score: 113.6 bits (283), Expect = 3.6e-22 Identity = 78/216 (36.11%), Postives = 114/216 (52.78%), Query Frame = 1
BLAST of Cucsa.205200.1 vs. NCBI nr
Match: gi|629092386|gb|KCW58381.1| (hypothetical protein EUGRSUZ_H01069 [Eucalyptus grandis]) HSP 1 Score: 112.1 bits (279), Expect = 1.0e-21 Identity = 71/182 (39.01%), Postives = 105/182 (57.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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