Cucsa.201180.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGTGTTTGAACCGTCCGTTTTTTAGTTGTTCGTATCATCGTCGGAGGAAAAGCTCAAGAATTTGAGGCGTCTTCTTCCCTTCCATTTCTTCCCAATTTCTTTGTTTCATCGCGAAGCAACCGCGAAATTTCCACGCCGTTCCTCCTTTTTCACTATTGGTGGCTGGGATCATCTTCATCGCTGTTCTTCCCTACAAAAaGGCTTTTTTTCCTCCATATTTTTtCCTCAATCCATTCTGAAATTCCAACACCTTAGTTCCTCAATCGATTTTCGATCCATTTTCACCCGAGATTTCTCCGTATACAGGTCAGTTTGTTGGCTATCTTCCTCCCTCTACAATTTTCTTACTTTTCGTTCTGTTCTTTGTGGAGAATGGTACAAAATGGTAGAATGAAATGGGGGTTATCTAATTTCTTTTTCTTGGGGGGTTGGTTTTGGAGTCAAATGGATGAAGCCCAGAACGGGTTGATGATTCGGGGATTGTTTTTATTAGGTCTTCTGAATTTTATTGGTTTATTGCATTTTTCTTtGTTTTTtCAACCAAAATTTCTGAAGTAAGATGGAATTGTTAGGGTTTCGTGAATCGAGTTTCGTTAAAAAAaTGTTCGGAATGTTGCCGCAGAGTCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGACAATTGGTGGCCAATTCAGGTTTACGAAGGCTTGGAGTTTCGAATGTGTCTTCATTTGAAAGCTCAATCTTCGACCATTCAGCAAATAATTTGTCGGCATCCATCTCCTTGATTTCTCGGTACAGACACTATGAATGTAGGCAGATCTCTCAGCTTGTGAAATCTAACGGAAAGCGATTGTTTCTAGTCGACACATTAGCCCTAGTAATTTCGCTCTCTTTATTCATTGCTTTTTCTCAGTATTGTTGCATCTTTCTATTGATTTCTGAAGGAAGATGGAGTGAAAATTTGAGAATCTCTTCTGCACGTTCATTAGGGGTTTTGGTAAGTGATTTAATTTATTTTCATCCAGGTTAGAAAATTGGAAGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCAATTACTGCTGCCATTACTGAAGTGCTAAATGACAGCTTGGAAAATATATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAGTGAGTTCCTATATACTCTACTTTTACATATTTTCAATTCTGCTTATGTTGGTATGGTTCAATGATGACAATATTCGATAACATCTATTTTTTAATTGTTCGCAATCTAACCAACCGTTGAATGTATATTGTCATCTGTTTGTAGATTGAAATGATCCAGGATTCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGTACCAATTTCTATCGCTTGTCTAACTAGTGTACTTCTTATACACCAATAGCTTGCATGATGGTCAAATAAAGAGTAATATTTGAATTTCTCATCTTTCTGTATTTTGCAGACTTGTTCTATGACTCTATCCTAGTTTAATTTCATCGTCTGATTAGATGACTTAGATGATAGTATCTATTTATAATACTCCATAATTTTTTtGGTTTAACAACAAAATAGAGGGAGAATCCTTACATTGAAAATGTCTGACAATATATACTCGAGAATGTTGTAGTTCTTGAACAGAATAGAAATATTCCAGACTGACGTGATGATATACCACTCCTAATTTCCTATTTCTTCCAATACGTGAAATAATTAACGGTGTGTATTTTGAATAATGGGAATGGAGTGGTTGGgTGGGGGGGTAAAGCTTCTTGGGGCATGGGAATTTTTTACAGCCAGTTTATGTCATGTTAAAGAGGCTATCTGGCTGAATTTTTTATAACTGAACTTGCTAGTGAAAGTAAGATAGTTATTGCCCTGAAACTTTACCTGCCTTGTAGCCTACAAAATTTGTATTTGGCCATTGTTTACTCTCAGTGGTTTTTTTCAAGATACCATGGTGTTTGCCGTGTAGGAACTTAATATTTTTGTCACCATGGACGTGAAACTCCCATATGCTACTGGTAGGAGTTTTACTTGATTTGACTTTTGAGGAGTTTTAGAAAAAAaCAAGTACAAAGGAATCCTATTTCGTCTTTCATTTTGCTTACTGCTTCTTCTGCTAGTTTACTTTGCAACAAGTTTCTTTACAATGTTGGATTGTTGTTTATGTTCATTGACCATTGGATTGAACACACGGGCATGTAGGGGCACCATTTTTCTTTATTGGGACATGAGACTGAAAAACTCCGAAATGATATTGAGAAGATGCGCAGTGAGCTGAGGTCTGTTTTACTGAACCTCGGTTTATAGTAAATGTATACTAGCTTCAAATTTAGACATTAACTTGTACTCTCTTAAATTAATCTTATTTGTGCAAAGACCTTTGACTACAATGTAGGTATGAAATTGACAAAGTCACTGCTGGACAGCGATTAGACTTGAATCTTGAAAGAGGGTAAGCATTACTTTTTCATGTAAAAGAAGCATGTCAAGTCAGTTTGTTAGTGTAGAGCACATTTTGGTTTAATTTTACATTTTCTTACAAGTTCTATTGCTCATAAATGCAGGAGGATTCGGGATGAGCTAGCTAATCAGAATGCTGAAACAACCAACCTAACTAACAAACTTGATCGGGTAAGACCAACCACTTGTGAAGAGGATGTTGGACAATTAAATAAAATGTTTTTtCTTTAATAAGTTGCAGAAAAACATATTTATTTTGTAGGTATATAGTTTATAGAGGTTAACCTGCAGTTTCAAAGATGGTTTTAAAACTTAAGAGCTTATCTAACATGAGTTATGTTGCTCATATAAAACTCATCAAACTCTTAGGAGGTGTTTAGCCTTCCAACTTCATATGAATGTCGGTATTAGAATACTCCCAACTCCACCAACTTCAACATTATTCTTTTTAATCTTTCCACATCTTCTCCGTTTTCTCTCTTTAATTTTtCCTTACTTTCCTAACACTAACTTCTTAGCTCCAAACTTAAGAATTCAACCCAACACGAAGTAAATATAGACTTTGACTTGTGAAGTATTAACACCAGCAAGCTGCAAACTCCTTGAAACTATGTTATATTATTTTACTTGGGAGAGCTAAAACTAATCACATTCCAAACATTAATTGTTGTTCATCAACATTTCAGGAAATTCATGGTCTGAGGGCACAGCTAGAAGCTGCAAAATACGATGTAATAAAATACTGCATTGGAACGCTCGTTTCCATTTCTGCTGTTGGTCTGGCTGTACTTCGCATCTTAATGTAAACATTTGAAGTCAGCTGAAGTTCTGATAGAGATTCGAAATCATAACTGGTTTGGGATTCATCCCGAATTTGACAAGGTGACATTTATTTCTATTTTTtCTTTAACCATATTTTAGAGAGGATTCTTGGAAGTTCAGTTATTTTCTCCGAGAGAGTTTCCATTTATTATTTTGTTTTCTCATGGAAATGGATCTCGACGTAGCCATTTGAATTGTACTTAATACTTGTTTCAGATGATGATAGTGATAATAAACATTGTTGTAAAGACTTTCTTTTGGTTTGATGA TGTGTGTTTGAACCGTCCGTTTTTTAGTTGTTCGTATCATCGTCGGAGGAAAAGCTCAAGAATTTGAGGCGTCTTCTTCCCTTCCATTTCTTCCCAATTTCTTTGTTTCATCGCGAAGCAACCGCGAAATTTCCACGCCGTTCCTCCTTTTTCACTATTGGTGGCTGGGATCATCTTCATCGCTGTTCTTCCCTACAAAAAGGCTTTTTTTCCTCCATATTTTTTCCTCAATCCATTCTGAAATTCCAACACCTTAGTTCCTCAATCGATTTTCGATCCATTTTCACCCGAGATTTCTCCGTATACAGGGTTTCGTGAATCGAGTTTCGTTAAAAAAATGTTCGGAATGTTGCCGCAGAGTCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGACAATTGGTGGCCAATTCAGGTTTACGAAGGCTTGGAGTTTCGAATGTGTCTTCATTTGAAAGCTCAATCTTCGACCATTCAGCAAATAATTTGTCGGCATCCATCTCCTTGATTTCTCGGTACAGACACTATGAATGTAGGCAGATCTCTCAGCTTGTGAAATCTAACGGAAAGCGATTGTTTCTAGTCGACACATTAGCCCTAGTTAGAAAATTGGAAGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCAATTACTGCTGCCATTACTGAAGTGCTAAATGACAGCTTGGAAAATATATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAATTGAAATGATCCAGGATTCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGGGCACCATTTTTCTTTATTGGGACATGAGACTGAAAAACTCCGAAATGATATTGAGAAGATGCGCAGTGAGCTGAGGTATGAAATTGACAAAGTCACTGCTGGACAGCGATTAGACTTGAATCTTGAAAGAGGGAGGATTCGGGATGAGCTAGCTAATCAGAATGCTGAAACAACCAACCTAACTAACAAACTTGATCGGGAAATTCATGGTCTGAGGGCACAGCTAGAAGCTGCAAAATACGATGTAATAAAATACTGCATTGGAACGCTCGTTTCCATTTCTGCTGTTGGTCTGGCTGTACTTCGCATCTTAATGTAAACATTTGAAGTCAGCTGAAGTTCTGATAGAGATTCGAAATCATAACTGGTTTGGGATTCATCCCGAATTTGACAAGGTGACATTTATTTCTATTTTTTCTTTAACCATATTTTAGAGAGGATTCTTGGAAGTTCAGTTATTTTCTCCGAGAGAGTTTCCATTTATTATTTTGTTTTCTCATGGAAATGGATCTCGACGTAGCCATTTGAATTGTACTTAATACTTGTTTCAGATGATGATAGTGATAATAAACATTGTTGTAAAGACTTTCTTTTGGTTTGATGA aTGTTCGGAATGTTGCCGCAGAGTCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGACAATTGGTGGCCAATTCAGGTTTACGAAGGCTTGGAGTTTCGAATGTGTCTTCATTTGAAAGCTCAATCTTCGACCATTCAGCAAATAATTTGTCGGCATCCATCTCCTTGATTTCTCGGTACAGACACTATGAATGTAGGCAGATCTCTCAGCTTGTGAAATCTAACGGAAAGCGATTGTTTCTAGTCGACACATTAGCCCTAGTTAGAAAATTGGAAGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCAATTACTGCTGCCATTACTGAAGTGCTAAATGACAGCTTGGAAAATATATCTCATTCATTTGTTTCAAAGGGGGAGATGCAGAAAATTGAAATGATCCAGGATTCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGGGCACCATTTTTCTTTATTGGGACATGAGACTGAAAAACTCCGAAATGATATTGAGAAGATGCGCAGTGAGCTGAGGTATGAAATTGACAAAGTCACTGCTGGACAGCGATTAGACTTGAATCTTGAAAGAGGGAGGATTCGGGATGAGCTAGCTAATCAGAATGCTGAAACAACCAACCTAACTAACAAACTTGATCGGGAAATTCATGGTCTGAGGGCACAGCTAGAAGCTGCAAAATACGATGTAATAAAATACTGCATTGGAACGCTCGTTTCCATTTCTGCTGTTGGTCTGGCTGTACTTCGCATCTTAATGTAA MFGMLPQSRMAAGAACKRVGQLVANSGLRRLGVSNVSSFESSIFDHSANNLSASISLISRYRHYECRQISQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGEMQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHGLRAQLEAAKYDVIKYCIGTLVSISAVGLAVLRILM*
BLAST of Cucsa.201180.1 vs. Swiss-Prot
Match: FMP32_YEAST (Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP32 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.4e-19 Identity = 46/166 (27.71%), Postives = 97/166 (58.43%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. Swiss-Prot
Match: CC90B_XENTR (Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus tropicalis GN=ccdc90b PE=2 SV=2) HSP 1 Score: 87.8 bits (216), Expect = 1.9e-16 Identity = 57/211 (27.01%), Postives = 103/211 (48.82%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. Swiss-Prot
Match: CC90B_HUMAN (Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo sapiens GN=CCDC90B PE=1 SV=2) HSP 1 Score: 87.0 bits (214), Expect = 3.2e-16 Identity = 54/196 (27.55%), Postives = 98/196 (50.00%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. Swiss-Prot
Match: MCUR1_HUMAN (Mitochondrial calcium uniporter regulator 1 OS=Homo sapiens GN=MCUR1 PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.5e-16 Identity = 56/200 (28.00%), Postives = 99/200 (49.50%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. Swiss-Prot
Match: FMP32_SCHPO (Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fmp32 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.5e-16 Identity = 47/175 (26.86%), Postives = 96/175 (54.86%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. TrEMBL
Match: A0A0A0KZG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G043920 PE=4 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 5.7e-137 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. TrEMBL
Match: M5VQZ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010752mg PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 1.6e-99 Identity = 199/249 (79.92%), Postives = 214/249 (85.94%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. TrEMBL
Match: I3SJ98_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.1e-91 Identity = 192/247 (77.73%), Postives = 207/247 (83.81%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. TrEMBL
Match: B9T6D7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0172840 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 2.8e-91 Identity = 191/248 (77.02%), Postives = 205/248 (82.66%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. TrEMBL
Match: A0A0S3R3Z4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G327300 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 6.2e-91 Identity = 193/248 (77.82%), Postives = 204/248 (82.26%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. TAIR10
Match: AT2G16460.1 (AT2G16460.1 Protein of unknown function (DUF1640)) HSP 1 Score: 327.0 bits (837), Expect = 1.0e-89 Identity = 173/219 (79.00%), Postives = 191/219 (87.21%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. TAIR10
Match: AT3G51090.1 (AT3G51090.1 Protein of unknown function (DUF1640)) HSP 1 Score: 317.0 bits (811), Expect = 1.1e-86 Identity = 173/251 (68.92%), Postives = 197/251 (78.49%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. TAIR10
Match: AT2G35090.1 (AT2G35090.1 Protein of unknown function (DUF1640)) HSP 1 Score: 68.9 bits (167), Expect = 5.1e-12 Identity = 49/176 (27.84%), Postives = 83/176 (47.16%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. TAIR10
Match: AT2G35070.1 (AT2G35070.1 unknown protein) HSP 1 Score: 63.2 bits (152), Expect = 2.8e-10 Identity = 47/172 (27.33%), Postives = 79/172 (45.93%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. NCBI nr
Match: gi|778690649|ref|XP_011653145.1| (PREDICTED: protein FMP32, mitochondrial [Cucumis sativus]) HSP 1 Score: 495.0 bits (1273), Expect = 8.2e-137 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. NCBI nr
Match: gi|659107512|ref|XP_008453713.1| (PREDICTED: protein FMP32, mitochondrial-like isoform X1 [Cucumis melo]) HSP 1 Score: 493.4 bits (1269), Expect = 2.4e-136 Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. NCBI nr
Match: gi|659107514|ref|XP_008453714.1| (PREDICTED: protein FMP32, mitochondrial-like isoform X2 [Cucumis melo]) HSP 1 Score: 475.3 bits (1222), Expect = 6.7e-131 Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. NCBI nr
Match: gi|595806823|ref|XP_007202505.1| (hypothetical protein PRUPE_ppa010752mg [Prunus persica]) HSP 1 Score: 370.5 bits (950), Expect = 2.3e-99 Identity = 199/249 (79.92%), Postives = 214/249 (85.94%), Query Frame = 1
BLAST of Cucsa.201180.1 vs. NCBI nr
Match: gi|645273238|ref|XP_008241782.1| (PREDICTED: protein FMP32, mitochondrial [Prunus mume]) HSP 1 Score: 368.6 bits (945), Expect = 8.8e-99 Identity = 198/249 (79.52%), Postives = 213/249 (85.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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