Cucsa.197710.1 (mRNA) Cucumber (Gy14) v1

NameCucsa.197710.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold01357 : 1010224 .. 1011950 (+)
Sequence length1727
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCTCTGATTTCTCTCATAAAATCATGCACCCACAAATCCCAATTGCTCCAAATCCATGCCCACATCATCACAACTTCTTCCGTTCAAGACCCCATTGTTTCCCTCCGCTTCTTGACGCGTACCGCCTCCGCCCCTTTTCGCGATTTGGGCTATTCTCGACGACTCTTTGATCTCCTGACTAACCCATTTGTTTCTCATTATAATGCGATGTTAAGAGCTTACTCTTTGAGCCGTTCACCACTAGAAGGATTGTACATGTACAGAGACATGGAGAGGCAAGGAGTTCGTGCTGATCCTTTGTCTTCTTCTTTTGCTGTTAAGTCGTGTATAAAATTGCTCTCGTTACTTTTCGGGATTCAGATTCACGCGAGGATTTTTAGAAATGGGCATCAAGCGGATAGTCTATTGCTCACTTCCATGATGGACCTGTATTCTCATTGTGGCAAACCTGAGGAAGCGTGCAAATTGTTCGATGAAGTTCCTCAAAAAGATGTTGTTGCTTGGAACGTTTTGATTTCTTGTTTAACTCGCAATAAACGAACTAGGGATGCTTTGGGTCTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCCAACCTGATAAAGTTACTTGTTTACTCCTCCTCCAAGCCTGTGCAGACTTGAATGCATTGGAGTTCGGTGAAAGGATTCATGGTTATATTCAACAACACGGTTATAATACTGAGAGTAATTTGTGTAATTCGCTGATATCAATGTATTCGCGGTGTGGGCGTATGGATAAGGCTTATGAGGTGTTTGATAAAATGACAGAGAAGAATGTTGTTTCATGGAGTGCGATGATTTCCGGGTTATCGATGAATGGGCACGGGAGGGAAGCTATTGAAGCATTTTGGGAGATGCAAAAGAATGGTGTCGAACCTGGTGATCATACTTTCACTGCTGTTCTTTCTGCTTGTAGCCACTGTGGCCTGGTTGATGAAGGAATGGCATTTTTTGATCGTATGAGACAGGAGTTCATGATAGCTCCCAACGTCCATCACTATGGATGTATAGTTGATCTTTTGGGTCGTGCTGGAATGCTCGATCAAGCCTACGAGCTCATAATGTCAATGGAGGTAAGACCAGATGCGACAATGTGGAGAACCCTTCTTGGAGCTTGCAGAATTCACGGTCATGGAAACCTTGGGGAGCGCATAGTTGAACATTTGATTGAACTCAAATCTCAAGAAGCAGGAGATTATGTGTTGTTGCTGAACATTTATTCTTCGGCTGGCAACTGGGACAAGGTAACTGAATTGAGGAAACTTATGAAGGAGAAGGGTATTTATACCACACCTTGCTGCACCACAATAGAACTGAACGGGgTGGTGCATCAATTTGCTGTGGATGATATTTCACATCCTATGAAAGACAAGATCTACAAGCAGTTGGATGAGATCAACAAGCAGCTAAAGATTGCAGGTTATGAAGCTGAAATGTCATCTGAATTACATAGATTAGAGCCAAAAGATAAAGGGTATGCACTTTCTAACCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCAACTCCGCCAGGAAGAACCATCAGAATCGCAAATAATATTCGTACTTGCATGGATTGTCATAACTTTGCTAAGTACATATCAAGTGTTTATAACAGAAAAGTGGTTGTTAGAGACCGAAGTCGGTTCCATCATTTCCAAGAGGGTCGGTGTTCCTGCAACGATTTTTGGTAA

mRNA sequence

AGCCTCTGATTTCTCTCATAAAATCATGCACCCACAAATCCCAATTGCTCCAAATCCATGCCCACATCATCACAACTTCTTCCGTTCAAGACCCCATTGTTTCCCTCCGCTTCTTGACGCGTACCGCCTCCGCCCCTTTTCGCGATTTGGGCTATTCTCGACGACTCTTTGATCTCCTGACTAACCCATTTGTTTCTCATTATAATGCGATGTTAAGAGCTTACTCTTTGAGCCGTTCACCACTAGAAGGATTGTACATGTACAGAGACATGGAGAGGCAAGGAGTTCGTGCTGATCCTTTGTCTTCTTCTTTTGCTGTTAAGTCGTGTATAAAATTGCTCTCGTTACTTTTCGGGATTCAGATTCACGCGAGGATTTTTAGAAATGGGCATCAAGCGGATAGTCTATTGCTCACTTCCATGATGGACCTGTATTCTCATTGTGGCAAACCTGAGGAAGCGTGCAAATTGTTCGATGAAGTTCCTCAAAAAGATGTTGTTGCTTGGAACGTTTTGATTTCTTGTTTAACTCGCAATAAACGAACTAGGGATGCTTTGGGTCTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCCAACCTGATAAAGTTACTTGTTTACTCCTCCTCCAAGCCTGTGCAGACTTGAATGCATTGGAGTTCGGTGAAAGGATTCATGGTTATATTCAACAACACGGTTATAATACTGAGAGTAATTTGTGTAATTCGCTGATATCAATGTATTCGCGGTGTGGGCGTATGGATAAGGCTTATGAGGTGTTTGATAAAATGACAGAGAAGAATGTTGTTTCATGGAGTGCGATGATTTCCGGGTTATCGATGAATGGGCACGGGAGGGAAGCTATTGAAGCATTTTGGGAGATGCAAAAGAATGGTGTCGAACCTGGTGATCATACTTTCACTGCTGTTCTTTCTGCTTGTAGCCACTGTGGCCTGGTTGATGAAGGAATGGCATTTTTTGATCGTATGAGACAGGAGTTCATGATAGCTCCCAACGTCCATCACTATGGATGTATAGTTGATCTTTTGGGTCGTGCTGGAATGCTCGATCAAGCCTACGAGCTCATAATGTCAATGGAGGTAAGACCAGATGCGACAATGTGGAGAACCCTTCTTGGAGCTTGCAGAATTCACGGTCATGGAAACCTTGGGGAGCGCATAGTTGAACATTTGATTGAACTCAAATCTCAAGAAGCAGGAGATTATGTGTTGTTGCTGAACATTTATTCTTCGGCTGGCAACTGGGACAAGGTAACTGAATTGAGGAAACTTATGAAGGAGAAGGGTATTTATACCACACCTTGCTGCACCACAATAGAACTGAACGGGGTGGTGCATCAATTTGCTGTGGATGATATTTCACATCCTATGAAAGACAAGATCTACAAGCAGTTGGATGAGATCAACAAGCAGCTAAAGATTGCAGGTTATGAAGCTGAAATGTCATCTGAATTACATAGATTAGAGCCAAAAGATAAAGGGTATGCACTTTCTAACCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCAACTCCGCCAGGAAGAACCATCAGAATCGCAAATAATATTCGTACTTGCATGGATTGTCATAACTTTGCTAAGTACATATCAAGTGTTTATAACAGAAAAGTGGTTGTTAGAGACCGAAGTCGGTTCCATCATTTCCAAGAGGGTCGGTGTTCCTGCAACGATTTTTGGTAA

Coding sequence (CDS)

ATGTTAAGAGCTTACTCTTTGAGCCGTTCACCACTAGAAGGATTGTACATGTACAGAGACATGGAGAGGCAAGGAGTTCGTGCTGATCCTTTGTCTTCTTCTTTTGCTGTTAAGTCGTGTATAAAATTGCTCTCGTTACTTTTCGGGATTCAGATTCACGCGAGGATTTTTAGAAATGGGCATCAAGCGGATAGTCTATTGCTCACTTCCATGATGGACCTGTATTCTCATTGTGGCAAACCTGAGGAAGCGTGCAAATTGTTCGATGAAGTTCCTCAAAAAGATGTTGTTGCTTGGAACGTTTTGATTTCTTGTTTAACTCGCAATAAACGAACTAGGGATGCTTTGGGTCTGTTTGAGATCATGCAGAGTCCAACGTATCTCTGCCAACCTGATAAAGTTACTTGTTTACTCCTCCTCCAAGCCTGTGCAGACTTGAATGCATTGGAGTTCGGTGAAAGGATTCATGGTTATATTCAACAACACGGTTATAATACTGAGAGTAATTTGTGTAATTCGCTGATATCAATGTATTCGCGGTGTGGGCGTATGGATAAGGCTTATGAGGTGTTTGATAAAATGACAGAGAAGAATGTTGTTTCATGGAGTGCGATGATTTCCGGGTTATCGATGAATGGGCACGGGAGGGAAGCTATTGAAGCATTTTGGGAGATGCAAAAGAATGGTGTCGAACCTGGTGATCATACTTTCACTGCTGTTCTTTCTGCTTGTAGCCACTGTGGCCTGGTTGATGAAGGAATGGCATTTTTTGATCGTATGAGACAGGAGTTCATGATAGCTCCCAACGTCCATCACTATGGATGTATAGTTGATCTTTTGGGTCGTGCTGGAATGCTCGATCAAGCCTACGAGCTCATAATGTCAATGGAGGTAAGACCAGATGCGACAATGTGGAGAACCCTTCTTGGAGCTTGCAGAATTCACGGTCATGGAAACCTTGGGGAGCGCATAGTTGAACATTTGATTGAACTCAAATCTCAAGAAGCAGGAGATTATGTGTTGTTGCTGAACATTTATTCTTCGGCTGGCAACTGGGACAAGGTAACTGAATTGAGGAAACTTATGAAGGAGAAGGGTATTTATACCACACCTTGCTGCACCACAATAGAACTGAACGGGgTGGTGCATCAATTTGCTGTGGATGATATTTCACATCCTATGAAAGACAAGATCTACAAGCAGTTGGATGAGATCAACAAGCAGCTAAAGATTGCAGGTTATGAAGCTGAAATGTCATCTGAATTACATAGATTAGAGCCAAAAGATAAAGGGTATGCACTTTCTAACCATAGTGAGAAATTGGCCATAGCCTTTGGGGTTCTTGCAACTCCGCCAGGAAGAACCATCAGAATCGCAAATAATATTCGTACTTGCATGGATTGTCATAACTTTGCTAAGTACATATCAAGTGTTTATAACAGAAAAGTGGTTGTTAGAGACCGAAGTCGGTTCCATCATTTCCAAGAGGGTCGGTGTTCCTGCAACGATTTTTGGTAA

Protein sequence

MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW*
BLAST of Cucsa.197710.1 vs. Swiss-Prot
Match: PP267_ARATH (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1)

HSP 1 Score: 680.2 bits (1754), Expect = 1.7e-194
Identity = 327/509 (64.24%), Postives = 409/509 (80.35%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQG-VRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRN 60
           M+RA+SLS++P EG  ++R + R   + A+PLSSSFA+K CIK   LL G+QIH +IF +
Sbjct: 83  MIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSD 142

Query: 61  GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 120
           G  +DSLL+T++MDLYS C    +ACK+FDE+P++D V+WNVL SC  RNKRTRD L LF
Sbjct: 143 GFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLF 202

Query: 121 EIMQSPTYLC-QPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMY 180
           + M++    C +PD VTCLL LQACA+L AL+FG+++H +I ++G +   NL N+L+SMY
Sbjct: 203 DKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262

Query: 181 SRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFT 240
           SRCG MDKAY+VF  M E+NVVSW+A+ISGL+MNG G+EAIEAF EM K G+ P + T T
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322

Query: 241 AVLSACSHCGLVDEGMAFFDRMRQ-EFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSME 300
            +LSACSH GLV EGM FFDRMR  EF I PN+HHYGC+VDLLGRA +LD+AY LI SME
Sbjct: 323 GLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSME 382

Query: 301 VRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTE 360
           ++PD+T+WRTLLGACR+HG   LGER++ HLIELK++EAGDYVLLLN YS+ G W+KVTE
Sbjct: 383 MKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTE 442

Query: 361 LRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAE 420
           LR LMKEK I+T P C+ IEL G VH+F VDD+SHP K++IYK L EIN+QLKIAGY AE
Sbjct: 443 LRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAE 502

Query: 421 MSSELHRLE-PKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYIS 480
           ++SELH LE  ++KGYAL  HSEKLAIAFG+L TPPG TIR+  N+RTC+DCHNFAK++S
Sbjct: 503 ITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVS 562

Query: 481 SVYNRKVVVRDRSRFHHFQEGRCSCNDFW 506
            VY+R V+VRDRSRFHHF+ G CSCNDFW
Sbjct: 563 DVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591


HSP 2 Score: 82.4 bits (202), Expect = 1.5e-14
Identity = 64/274 (23.36%), Postives = 126/274 (45.99%), Query Frame = 1

Query: 51  QIHARIFRNGHQADSLLLTSMMDLYSHCGKPEE---ACKLFDEVPQKDVVAWNVLISCLT 110
           QIHA + R     +S +    +   +    P +   +C++F +     +   N +I   +
Sbjct: 29  QIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFS 88

Query: 111 RNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTE 170
            ++   +   LF  ++  + L   + ++    L+ C     L  G +IHG I   G+ ++
Sbjct: 89  LSQTPCEGFRLFRSLRRNSSL-PANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSD 148

Query: 171 SNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQK 230
           S L  +L+ +YS C     A +VFD++ +++ VSW+ + S    N   R+ +  F +M+ 
Sbjct: 149 SLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKN 208

Query: 231 N---GVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAG 290
           +    V+P   T    L AC++ G +D G    D +  E  ++  ++    +V +  R G
Sbjct: 209 DVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI-DENGLSGALNLSNTLVSMYSRCG 268

Query: 291 MLDQAYELIMSMEVRPDATMWRTLLGACRIHGHG 319
            +D+AY++   M  R +   W  L+    ++G G
Sbjct: 269 SMDKAYQVFYGMRER-NVVSWTALISGLAMNGFG 299

BLAST of Cucsa.197710.1 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 3.9e-119
Identity = 210/508 (41.34%), Postives = 325/508 (63.98%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M+  Y+ + +  E L +++DM +  VR D  +    V +C +  S+  G Q+H  I  +G
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF- 120
             ++  ++ +++DLYS CG+ E AC LF+ +P KDV++WN LI   T     ++AL LF 
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356

Query: 121 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQH--GYNTESNLCNSLISM 180
           E+++S      P+ VT L +L ACA L A++ G  IH YI +   G    S+L  SLI M
Sbjct: 357 EMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 416

Query: 181 YSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTF 240
           Y++CG ++ A++VF+ +  K++ SW+AMI G +M+G    + + F  M+K G++P D TF
Sbjct: 417 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 476

Query: 241 TAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSME 300
             +LSACSH G++D G   F  M Q++ + P + HYGC++DLLG +G+  +A E+I  ME
Sbjct: 477 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 536

Query: 301 VRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTE 360
           + PD  +W +LL AC++HG+  LGE   E+LI+++ +  G YVLL NIY+SAG W++V +
Sbjct: 537 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 596

Query: 361 LRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAE 420
            R L+ +KG+   P C++IE++ VVH+F + D  HP   +IY  L+E+   L+ AG+  +
Sbjct: 597 TRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPD 656

Query: 421 MSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISS 480
            S  L  +E + K  AL +HSEKLAIAFG+++T PG  + I  N+R C +CH   K IS 
Sbjct: 657 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISK 716

Query: 481 VYNRKVVVRDRSRFHHFQEGRCSCNDFW 506
           +Y R+++ RDR+RFHHF++G CSCND+W
Sbjct: 717 IYKREIIARDRTRFHHFRDGVCSCNDYW 741


HSP 2 Score: 151.0 bits (380), Expect = 3.5e-35
Identity = 85/303 (28.05%), Postives = 162/303 (53.47%), Query Frame = 1

Query: 55  RIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRD 114
           ++F      D +  T+++  Y+  G  E A KLFDE+P KDVV+WN +IS        ++
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 249

Query: 115 ALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSL 174
           AL LF+ M       +PD+ T + ++ ACA   ++E G ++H +I  HG+ +   + N+L
Sbjct: 250 ALELFKDMMKTNV--RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL 309

Query: 175 ISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGD 234
           I +YS+CG ++ A  +F+++  K+V+SW+ +I G +     +EA+  F EM ++G  P D
Sbjct: 310 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 369

Query: 235 HTFTAVLSACSHCGLVDEGM---AFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYE 294
            T  ++L AC+H G +D G     + D+  +    A ++     ++D+  + G ++ A++
Sbjct: 370 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR--TSLIDMYAKCGDIEAAHQ 429

Query: 295 LIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQ-EAGDYVLLLNIYSSAG 354
           +  S+ +    + W  ++    +HG  +    +   + ++  Q +   +V LL+  S +G
Sbjct: 430 VFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 487


HSP 3 Score: 97.1 bits (240), Expect = 6.1e-19
Identity = 95/373 (25.47%), Postives = 164/373 (43.97%), Query Frame = 1

Query: 8   SRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLL 67
           S  P   L    D     +R  P  S   + +C  L SL     IHA++ + G    +  
Sbjct: 13  SSYPFHFLPSSSDPPYDSIRNHPSLS--LLHNCKTLQSLRI---IHAQMIKIGLHNTNYA 72

Query: 68  LTSMMD---LYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQS 127
           L+ +++   L  H      A  +F  + + +++ WN +      +     AL L+  M S
Sbjct: 73  LSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 132

Query: 128 PTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQ-------------------QHGYN 187
              L  P+  T   +L++CA   A + G++IHG++                    Q+G  
Sbjct: 133 LGLL--PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 192

Query: 188 TESNLC------------NSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNG 247
            +++               +LI  Y+  G ++ A ++FD++  K+VVSW+AMISG +  G
Sbjct: 193 EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETG 252

Query: 248 HGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHY 307
           + +EA+E F +M K  V P + T   V+SAC+  G ++ G         +     N+   
Sbjct: 253 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-VHLWIDDHGFGSNLKIV 312

Query: 308 GCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNL-GERIVEHLIELK 346
             ++DL  + G L+ A  L   +  + D   W TL+G    + H NL  E ++     L+
Sbjct: 313 NALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLR 372


HSP 4 Score: 72.8 bits (177), Expect = 1.2e-11
Identity = 84/355 (23.66%), Postives = 150/355 (42.25%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M R ++LS  P+  L +Y  M   G+  +  +  F +KSC K  +   G QIH  + + G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
              D  + TS++ +Y   G+ E+A K+FD+ P +DVV++  LI          +A  LF+
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
            +        P K             + + +   I GY +   Y     L   ++    R
Sbjct: 225 EI--------PVK-------------DVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 284

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
                      D+ T   VVS  A    + +   GR+     W +  +G         A+
Sbjct: 285 P----------DESTMVTVVSACAQSGSIEL---GRQV--HLW-IDDHGFGSNLKIVNAL 344

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCI-VDLLGRAGMLDQAYELIMSMEVR 300
           +   S CG ++     F+R+  + +I+ N    G   ++L   A +L Q  E++ S E  
Sbjct: 345 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ--EMLRSGETP 404

Query: 301 PDATMWRTLLGACRIHGHGNLGERI---VEHLIELKSQEAGDYVLLLNIYSSAGN 352
            D TM  ++L AC   G  ++G  I   ++  ++  +  +     L+++Y+  G+
Sbjct: 405 NDVTM-LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419

BLAST of Cucsa.197710.1 vs. Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 423.7 bits (1088), Expect = 2.8e-117
Identity = 208/507 (41.03%), Postives = 318/507 (62.72%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQG-VRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRN 60
           ++R Y+   + +    +YR+M   G V  D  +  F +K+   +  +  G  IH+ + R+
Sbjct: 91  LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150

Query: 61  GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 120
           G  +   +  S++ LY++CG    A K+FD++P+KD+VAWN +I+    N +  +AL L+
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210

Query: 121 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYS 180
             M S     +PD  T + LL ACA + AL  G+R+H Y+ + G     +  N L+ +Y+
Sbjct: 211 TEMNSKGI--KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 270

Query: 181 RCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKN-GVEPGDHTFT 240
           RCGR+++A  +FD+M +KN VSW+++I GL++NG G+EAIE F  M+   G+ P + TF 
Sbjct: 271 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 330

Query: 241 AVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEV 300
            +L ACSHCG+V EG  +F RMR+E+ I P + H+GC+VDLL RAG + +AYE I SM +
Sbjct: 331 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 390

Query: 301 RPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTEL 360
           +P+  +WRTLLGAC +HG  +L E     +++L+   +GDYVLL N+Y+S   W  V ++
Sbjct: 391 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 450

Query: 361 RKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEM 420
           RK M   G+   P  + +E+   VH+F + D SHP  D IY +L E+  +L+  GY  ++
Sbjct: 451 RKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 510

Query: 421 SSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSV 480
           S+    +E ++K  A+  HSEK+AIAF +++TP    I +  N+R C DCH   K +S V
Sbjct: 511 SNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKV 570

Query: 481 YNRKVVVRDRSRFHHFQEGRCSCNDFW 506
           YNR++VVRDRSRFHHF+ G CSC D+W
Sbjct: 571 YNREIVVRDRSRFHHFKNGSCSCQDYW 595


HSP 2 Score: 121.7 bits (304), Expect = 2.3e-26
Identity = 87/294 (29.59%), Postives = 146/294 (49.66%), Query Frame = 1

Query: 37  VKSCIKLLSLLFGI-------QIHARIFRNGHQADSLLLTSMMDLY--SHCGKP--EEAC 96
           V+ CI LL   +G+       QIHA   R+G       L   +  Y  S    P    A 
Sbjct: 15  VEKCINLLQT-YGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 74

Query: 97  KLFDEVPQK-DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACA 156
           K+F ++ +  +V  WN LI        +  A  L+  M+  + L +PD  T   L++A  
Sbjct: 75  KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRV-SGLVEPDTHTYPFLIKAVT 134

Query: 157 DLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSA 216
            +  +  GE IH  + + G+ +   + NSL+ +Y+ CG +  AY+VFDKM EK++V+W++
Sbjct: 135 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 194

Query: 217 MISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEF 276
           +I+G + NG   EA+  + EM   G++P   T  ++LSAC+  G +  G      M  + 
Sbjct: 195 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKV 254

Query: 277 MIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHG 319
            +  N+H    ++DL  R G +++A  L   M V  ++  W +L+    ++G G
Sbjct: 255 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFG 304

BLAST of Cucsa.197710.1 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 5.5e-113
Identity = 197/452 (43.58%), Postives = 302/452 (66.81%), Query Frame = 1

Query: 55  RIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRD 114
           R+F    + D++  T+M+D Y+     E A ++ + +PQKD+VAWN LIS   +N +  +
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347

Query: 115 ALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSL 174
           AL +F  +Q    + + +++T +  L ACA + ALE G  IH YI++HG     ++ ++L
Sbjct: 348 ALIVFHELQLQKNM-KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 407

Query: 175 ISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGD 234
           I MYS+CG ++K+ EVF+ + +++V  WSAMI GL+M+G G EA++ F++MQ+  V+P  
Sbjct: 408 IHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 467

Query: 235 HTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIM 294
            TFT V  ACSH GLVDE  + F +M   + I P   HY CIVD+LGR+G L++A + I 
Sbjct: 468 VTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 527

Query: 295 SMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDK 354
           +M + P  ++W  LLGAC+IH + NL E     L+EL+ +  G +VLL NIY+  G W+ 
Sbjct: 528 AMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWEN 587

Query: 355 VTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGY 414
           V+ELRK M+  G+   P C++IE++G++H+F   D +HPM +K+Y +L E+ ++LK  GY
Sbjct: 588 VSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 647

Query: 415 EAEMSSELHRLEPKD-KGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAK 474
           E E+S  L  +E ++ K  +L+ HSEKLAI +G+++T   + IR+  N+R C DCH+ AK
Sbjct: 648 EPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAK 707

Query: 475 YISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 506
            IS +Y+R+++VRDR RFHHF+ G+CSCNDFW
Sbjct: 708 LISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738


HSP 2 Score: 135.6 bits (340), Expect = 1.5e-30
Identity = 99/397 (24.94%), Postives = 184/397 (46.35%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQG-VRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRN 60
           ++RAY+    P+  ++ + DM  +     +  +  F +K+  ++ SL  G  +H    ++
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160

Query: 61  GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 120
              +D  +  S++  Y  CG  + ACK+F  + +KDVV+WN +I+   +      AL LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220

Query: 121 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYN---TESNL------ 180
           + M+S     +   VT + +L ACA +  LEFG ++  YI+++  N   T +N       
Sbjct: 221 KKMESEDV--KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 280

Query: 181 -CNSL---------------------ISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISG 240
            C S+                     +  Y+     + A EV + M +K++V+W+A+IS 
Sbjct: 281 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 340

Query: 241 LSMNGHGREAIEAFWEMQ-KNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIA 300
              NG   EA+  F E+Q +  ++    T  + LSAC+  G ++ G      +++   I 
Sbjct: 341 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH-GIR 400

Query: 301 PNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEH 360
            N H    ++ +  + G L+++ E+  S+E R D  +W  ++G   +HG GN    +   
Sbjct: 401 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKR-DVFVWSAMIGGLAMHGCGNEAVDMFYK 460

Query: 361 LIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKE 365
           + E   +  G  V   N++ +  +   V E   L  +
Sbjct: 461 MQEANVKPNG--VTFTNVFCACSHTGLVDEAESLFHQ 491


HSP 3 Score: 121.7 bits (304), Expect = 2.3e-26
Identity = 81/275 (29.45%), Postives = 137/275 (49.82%), Query Frame = 1

Query: 37  VKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSM--MDLYSHCGKPEEACKLFDEVPQK 96
           ++ C+ L  L    Q H  + R G  +D    + +  M   S     E A K+FDE+P+ 
Sbjct: 37  IERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 96

Query: 97  DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGER 156
           +  AWN LI           ++  F  M S +  C P+K T   L++A A++++L  G+ 
Sbjct: 97  NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQ-CYPNKYTFPFLIKAAAEVSSLSLGQS 156

Query: 157 IHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGH 216
           +HG   +    ++  + NSLI  Y  CG +D A +VF  + EK+VVSW++MI+G    G 
Sbjct: 157 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 216

Query: 217 GREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYG 276
             +A+E F +M+   V+    T   VLSAC+    ++ G      + +E  +  N+    
Sbjct: 217 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI-EENRVNVNLTLAN 276

Query: 277 CIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLL 310
            ++D+  + G ++ A  L  +ME + + T W T+L
Sbjct: 277 AMLDMYTKCGSIEDAKRLFDAMEEKDNVT-WTTML 305


HSP 4 Score: 69.7 bits (169), Expect = 1.0e-10
Identity = 46/217 (21.20%), Postives = 108/217 (49.77%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQ-GVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRN 60
           ++ AY  +  P E L ++ +++ Q  ++ + ++    + +C ++ +L  G  IH+ I ++
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394

Query: 61  GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 120
           G + +  + ++++ +YS CG  E++ ++F+ V ++DV  W+ +I  L  +    +A+ +F
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454

Query: 121 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERI-HGYIQQHGYNTESNLCNSLISMY 180
             MQ      +P+ VT   +  AC+    ++  E + H     +G   E      ++ + 
Sbjct: 455 YKMQEAN--VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 514

Query: 181 SRCGRMDKAYEVFDKMTEKNVVS-WSAMISGLSMNGH 215
            R G ++KA +  + M      S W A++    ++ +
Sbjct: 515 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549


HSP 5 Score: 66.2 bits (160), Expect = 1.1e-09
Identity = 73/370 (19.73%), Postives = 152/370 (41.08%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M+  +    SP + L +++ ME + V+A  ++    + +C K+ +L FG Q+ + I  N 
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
              +  L  +M+D+Y+ CG  E+A +LFD + +KD V W  ++     ++   D     E
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE---DYEAARE 322

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
           ++ S   + Q D V    L+ A       + G+     I  H    + N+  + I++ S 
Sbjct: 323 VLNS---MPQKDIVAWNALISAYE-----QNGKPNEALIVFHELQLQKNMKLNQITLVS- 382

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
                              +S  A +  L +       I+        G+    H  +A+
Sbjct: 383 ------------------TLSACAQVGALELGRWIHSYIKKH------GIRMNFHVTSAL 442

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSME--- 300
           +   S CG +++    F+ + +      +V  +  ++  L   G  ++A ++   M+   
Sbjct: 443 IHMYSKCGDLEKSREVFNSVEKR-----DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 502

Query: 301 VRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQ-----EAGDYVLLLNIYSSAGNW 360
           V+P+   +  +  AC    H  L +       +++S      E   Y  ++++   +G  
Sbjct: 503 VKPNGVTFTNVFCAC---SHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYL 528

Query: 361 DKVTELRKLM 363
           +K  +  + M
Sbjct: 563 EKAVKFIEAM 528

BLAST of Cucsa.197710.1 vs. Swiss-Prot
Match: PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 3.9e-111
Identity = 207/507 (40.83%), Postives = 315/507 (62.13%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGV-RADPLSSSFAVKSCIKLLSLLFGIQIHARIFRN 60
           ++R +S S SPL  +  Y  M    V R D  + +FA+KSC ++ S+   ++IH  + R+
Sbjct: 77  LIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRS 136

Query: 61  GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 120
           G   D+++ TS++  YS  G  E A K+FDE+P +D+V+WNV+I C +       AL ++
Sbjct: 137 GFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMY 196

Query: 121 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYS 180
           + M +   +C  D  T + LL +CA ++AL  G  +H         +   + N+LI MY+
Sbjct: 197 KRMGNEG-VCG-DSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 256

Query: 181 RCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTA 240
           +CG ++ A  VF+ M +++V++W++MI G  ++GHG EAI  F +M  +GV P   TF  
Sbjct: 257 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 316

Query: 241 VLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVR 300
           +L  CSH GLV EG+  F+ M  +F + PNV HYGC+VDL GRAG L+ + E+I +    
Sbjct: 317 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCH 376

Query: 301 PDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELR 360
            D  +WRTLLG+C+IH +  LGE  ++ L++L++  AGDYVL+ +IYS+A +      +R
Sbjct: 377 EDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMR 436

Query: 361 KLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMS 420
           KL++   + T P  + IE+   VH+F VDD  HP    IY +L E+  +  +AGY+ E S
Sbjct: 437 KLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDS 496

Query: 421 SE-LHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSV 480
           +     L  +  G A ++HSEKLAIA+G++ T  G T+RI  N+R C DCH+F KY+S  
Sbjct: 497 NRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKA 556

Query: 481 YNRKVVVRDRSRFHHFQEGRCSCNDFW 506
           +NR+++VRDR RFHHF +G CSCND+W
Sbjct: 557 FNREIIVRDRVRFHHFADGICSCNDYW 581


HSP 2 Score: 94.7 bits (234), Expect = 3.0e-18
Identity = 68/271 (25.09%), Postives = 125/271 (46.13%), Query Frame = 1

Query: 51  QIHARIFRNGHQADSLLLTSMMDL--YSHCGKPEEACKLFDEVPQKDVVA-WNVLISCLT 110
           +IH+ +  NG Q    +   ++     S  G    A  LFD        + WN LI   +
Sbjct: 23  KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFS 82

Query: 111 RNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTE 170
            +    +++ LF      + + +PD  T    L++C  + ++     IHG + + G+  +
Sbjct: 83  NSSSPLNSI-LFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDD 142

Query: 171 SNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQK 230
           + +  SL+  YS  G ++ A +VFD+M  +++VSW+ MI   S  G   +A+  +  M  
Sbjct: 143 AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN 202

Query: 231 NGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLD 290
            GV    +T  A+LS+C+H   ++ G+    R+  +      V     ++D+  + G L+
Sbjct: 203 EGVCGDSYTLVALLSSCAHVSALNMGV-MLHRIACDIRCESCVFVSNALIDMYAKCGSLE 262

Query: 291 QAYELIMSMEVRPDATMWRTLLGACRIHGHG 319
            A  +   M  R D   W +++    +HGHG
Sbjct: 263 NAIGVFNGMRKR-DVLTWNSMIIGYGVHGHG 290

BLAST of Cucsa.197710.1 vs. TrEMBL
Match: A0A0A0LUH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G009750 PE=4 SV=1)

HSP 1 Score: 1035.8 bits (2677), Expect = 1.7e-299
Identity = 504/505 (99.80%), Postives = 504/505 (99.80%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIF NG
Sbjct: 98  MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFING 157

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
           HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE
Sbjct: 158 HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 217

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
           IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR
Sbjct: 218 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 277

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
           CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV
Sbjct: 278 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 337

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 300
           LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP
Sbjct: 338 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 397

Query: 301 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 360
           DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK
Sbjct: 398 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 457

Query: 361 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 420
           LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS
Sbjct: 458 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 517

Query: 421 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 480
           ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN
Sbjct: 518 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 577

Query: 481 RKVVVRDRSRFHHFQEGRCSCNDFW 506
           RKVVVRDRSRFHHFQEGRCSCNDFW
Sbjct: 578 RKVVVRDRSRFHHFQEGRCSCNDFW 602

BLAST of Cucsa.197710.1 vs. TrEMBL
Match: M5WQ95_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003212mg PE=4 SV=1)

HSP 1 Score: 776.2 bits (2003), Expect = 2.5e-221
Identity = 360/505 (71.29%), Postives = 435/505 (86.14%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M+RAYS+S SP EG  MYRD+ R+G+RAD L+SSF +KSCI++ SLL GIQ+HARI R G
Sbjct: 88  MVRAYSISDSPEEGFSMYRDLLRRGLRADALASSFVIKSCIRVSSLLGGIQVHARILRGG 147

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
           H++DS LLT++MDLYS CGK +EACKLFDE+P++DVVAWNVLISC   N RTRDA+ LF+
Sbjct: 148 HESDSRLLTTLMDLYSICGKCDEACKLFDEMPKRDVVAWNVLISCCLHNNRTRDAVSLFD 207

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
           IM+S T+ C+PD+VTCLL+LQAC++LNALEFGER+H YI++HGY+  SNLCNSLI+MYSR
Sbjct: 208 IMRSETHRCEPDEVTCLLMLQACSNLNALEFGERVHKYIEEHGYDGASNLCNSLIAMYSR 267

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
           CG +DKAYEVF  M +KNVVSWSAMISGL++NG+GREAIEAF EMQK GV P D TFT V
Sbjct: 268 CGCLDKAYEVFKGMKDKNVVSWSAMISGLAVNGYGREAIEAFGEMQKMGVLPDDQTFTGV 327

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 300
           L ACSHCGLVDEGM FFDRM ++F + PN+HHYGC+VDLLGRAG LDQAY+LI+SM+++P
Sbjct: 328 LCACSHCGLVDEGMVFFDRMSKDFGVVPNIHHYGCMVDLLGRAGRLDQAYQLILSMDIKP 387

Query: 301 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 360
           D+T+WRTLLG CRIHGH  L E ++ HLIELK+QEAGDYVLL+NIYSSAGNW+K+TE+RK
Sbjct: 388 DSTIWRTLLGGCRIHGHDALAESVIGHLIELKAQEAGDYVLLMNIYSSAGNWEKLTEVRK 447

Query: 361 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 420
            MKEK I TTP C+TIEL GV H+F VDD+SHP KD+IY  LDEIN QLKIAGY A++SS
Sbjct: 448 FMKEKAIQTTPGCSTIELKGVAHEFVVDDVSHPRKDEIYNMLDEINSQLKIAGYVADVSS 507

Query: 421 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 480
           ELH L  ++KG+ALS HSEKLAIAFGVLATPPG  IR+A N+R C+DCHNFA  +S VYN
Sbjct: 508 ELHNLGTEEKGHALSYHSEKLAIAFGVLATPPGTPIRVAKNLRICVDCHNFAMVLSGVYN 567

Query: 481 RKVVVRDRSRFHHFQEGRCSCNDFW 506
           R+V++RDR+RFHHF+EGRCSCN +W
Sbjct: 568 REVIIRDRTRFHHFREGRCSCNGYW 592

BLAST of Cucsa.197710.1 vs. TrEMBL
Match: A0A067K583_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11633 PE=4 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 3.7e-217
Identity = 352/505 (69.70%), Postives = 429/505 (84.95%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M+R YS S SP+EG YMY+ M ++G+RADP+S SFAVK  +K+ SL+ G+Q+HARI R+G
Sbjct: 99  MIRVYSSSNSPIEGFYMYQQMRKRGLRADPISLSFAVKCFVKVCSLVGGVQVHARILRDG 158

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
           HQ+DSLLLT++MDLYS C K  EA K+FD++PQ+D VAWNVLISC  RN RT+D LG+F+
Sbjct: 159 HQSDSLLLTNLMDLYSICQKGNEAYKVFDDIPQRDTVAWNVLISCYIRNHRTKDVLGVFD 218

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
            + S  + C+PD VTCLLLLQAC++L ALEFGE++HGY+++HGY    NLCNSLI+MYSR
Sbjct: 219 HLASGDFGCEPDDVTCLLLLQACSNLGALEFGEKVHGYVEEHGYGDAMNLCNSLIAMYSR 278

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
           CG +DKAY VF +M +KNVV+WSAMISG +MNGHGREAI+AF EMQ+ G+ P D TFT V
Sbjct: 279 CGCLDKAYNVFKRMPKKNVVTWSAMISGFAMNGHGREAIQAFEEMQRIGILPDDQTFTGV 338

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 300
           LSACSHCGLVDEGM FF+RM +EF IAPNVHHYGCIVDLLGRA  LD+AY+LIMSM+V+P
Sbjct: 339 LSACSHCGLVDEGMLFFERMNREFGIAPNVHHYGCIVDLLGRASQLDRAYQLIMSMKVKP 398

Query: 301 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 360
           D+T+WRTLLGACRIH H  L ER+V HLIELK+QEAGDY+LLLNIYSS GNW+KVTELR+
Sbjct: 399 DSTIWRTLLGACRIHRHVMLAERVVGHLIELKAQEAGDYILLLNIYSSVGNWEKVTELRR 458

Query: 361 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 420
            MKEKGI TTP C++IELNG VH+F VDD+SHP KD+IY+ LDEIN QLKIAGY  E++S
Sbjct: 459 FMKEKGIQTTPGCSSIELNGQVHEFVVDDVSHPRKDEIYEMLDEINTQLKIAGYVVEITS 518

Query: 421 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 480
           ELH L  ++K Y LS HSEKLAIAFG+L+TPPG TIR+A N+RTC+DCHNFAK++S VYN
Sbjct: 519 ELHNLGAEEKQYVLSYHSEKLAIAFGILSTPPGTTIRVAKNLRTCVDCHNFAKFVSGVYN 578

Query: 481 RKVVVRDRSRFHHFQEGRCSCNDFW 506
           R+V +RDR+RFHHF+EG CSCND+W
Sbjct: 579 RQVNIRDRTRFHHFREGSCSCNDYW 603

BLAST of Cucsa.197710.1 vs. TrEMBL
Match: I1JZP1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G026400 PE=4 SV=2)

HSP 1 Score: 750.4 bits (1936), Expect = 1.5e-213
Identity = 353/505 (69.90%), Postives = 422/505 (83.56%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M+RA S+S SP +GL +YRDM R+G+ ADPLSSSFAVKSCI+ L L  G+Q+H  IF++G
Sbjct: 75  MIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDG 134

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
           HQ D+LLLT++MDLYS C +  +ACK+FDE+P +D VAWNV+ISC  RN RTRDAL LF+
Sbjct: 135 HQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFD 194

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
           +MQ  +Y C+PD VTCLLLLQACA LNALEFGERIHGYI + GY    NLCNSLISMYSR
Sbjct: 195 VMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSR 254

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
           CG +DKAYEVF  M  KNVVSWSAMISGL+MNG+GREAIEAF EM + GV P D TFT V
Sbjct: 255 CGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGV 314

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 300
           LSACS+ G+VDEGM+FF RM +EF + PNVHHYGC+VDLLGRAG+LD+AY+LIMSM V+P
Sbjct: 315 LSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKP 374

Query: 301 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 360
           D+TMWRTLLGACRIHGH  LGER++ HLIELK+QEAGDYVLLLNIYSSAG+W+KV E+RK
Sbjct: 375 DSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRK 434

Query: 361 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 420
           LMK K I TTP C+TIEL G VH+F VDD+SH    +IY+ LDEIN QL+IAGY  E+SS
Sbjct: 435 LMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSS 494

Query: 421 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 480
           ELH+++ K+KGY LS+HSEKLA+AFGVLATPPG  +R+A+N+R C+DCHNF K  S VYN
Sbjct: 495 ELHKMDDKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNLRVCVDCHNFLKLFSGVYN 554

Query: 481 RKVVVRDRSRFHHFQEGRCSCNDFW 506
           R VV+RD +RFHHF+ GRCSC+D+W
Sbjct: 555 RDVVLRDHNRFHHFRGGRCSCSDYW 579

BLAST of Cucsa.197710.1 vs. TrEMBL
Match: A0A0B2SV07_GLYSO (Pentatricopeptide repeat-containing protein OS=Glycine soja GN=glysoja_015838 PE=4 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 7.3e-213
Identity = 352/505 (69.70%), Postives = 421/505 (83.37%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M+RA S+S SP +GL +YRDM R+G+ ADPLSSSFAVKSCI+ L L  G+Q+H  IF++G
Sbjct: 75  MIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDG 134

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
           HQ D+LLLT++MDLYS C +  +ACK+FDE+P +D VAWNV+ISC  RN RTRDAL LF+
Sbjct: 135 HQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFD 194

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
           +MQ  +Y C+PD VTCLLLLQACA LNALEFGERIHGYI + GY    NLCNSLISMYSR
Sbjct: 195 VMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSR 254

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
           CG +DKAYEVF  M  KNVVSWSAMISGL+MNG+GREAIEAF EM + GV P D TFT V
Sbjct: 255 CGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGV 314

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 300
           LSACS+ G+VDEGM+FF RM +EF + PNVHHYGC+VDLLGRAG+LD+AY+LIMSM  +P
Sbjct: 315 LSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVEKP 374

Query: 301 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 360
           D+TMWRTLLGACRIHGH  LGER++ HLIELK+QEAGDYVLLLNIYSSAG+W+KV E+RK
Sbjct: 375 DSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRK 434

Query: 361 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 420
           LMK K I TTP C+TIEL G VH+F VDD+SH    +IY+ LDEIN QL+IAGY  E+SS
Sbjct: 435 LMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSS 494

Query: 421 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 480
           ELH+++ K+KGY LS+HSEKLA+AFGVLATPPG  +R+A+N+R C+DCHNF K  S VYN
Sbjct: 495 ELHKMDDKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNLRVCVDCHNFLKLFSGVYN 554

Query: 481 RKVVVRDRSRFHHFQEGRCSCNDFW 506
           R VV+RD +RFHHF+ GRCSC+D+W
Sbjct: 555 RDVVLRDHNRFHHFRGGRCSCSDYW 579

BLAST of Cucsa.197710.1 vs. TAIR10
Match: AT3G47530.1 (AT3G47530.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 680.2 bits (1754), Expect = 9.4e-196
Identity = 327/509 (64.24%), Postives = 409/509 (80.35%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQG-VRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRN 60
           M+RA+SLS++P EG  ++R + R   + A+PLSSSFA+K CIK   LL G+QIH +IF +
Sbjct: 83  MIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSD 142

Query: 61  GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 120
           G  +DSLL+T++MDLYS C    +ACK+FDE+P++D V+WNVL SC  RNKRTRD L LF
Sbjct: 143 GFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLF 202

Query: 121 EIMQSPTYLC-QPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMY 180
           + M++    C +PD VTCLL LQACA+L AL+FG+++H +I ++G +   NL N+L+SMY
Sbjct: 203 DKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262

Query: 181 SRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFT 240
           SRCG MDKAY+VF  M E+NVVSW+A+ISGL+MNG G+EAIEAF EM K G+ P + T T
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322

Query: 241 AVLSACSHCGLVDEGMAFFDRMRQ-EFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSME 300
            +LSACSH GLV EGM FFDRMR  EF I PN+HHYGC+VDLLGRA +LD+AY LI SME
Sbjct: 323 GLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSME 382

Query: 301 VRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTE 360
           ++PD+T+WRTLLGACR+HG   LGER++ HLIELK++EAGDYVLLLN YS+ G W+KVTE
Sbjct: 383 MKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTE 442

Query: 361 LRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAE 420
           LR LMKEK I+T P C+ IEL G VH+F VDD+SHP K++IYK L EIN+QLKIAGY AE
Sbjct: 443 LRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAE 502

Query: 421 MSSELHRLE-PKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYIS 480
           ++SELH LE  ++KGYAL  HSEKLAIAFG+L TPPG TIR+  N+RTC+DCHNFAK++S
Sbjct: 503 ITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVS 562

Query: 481 SVYNRKVVVRDRSRFHHFQEGRCSCNDFW 506
            VY+R V+VRDRSRFHHF+ G CSCNDFW
Sbjct: 563 DVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591


HSP 2 Score: 82.4 bits (202), Expect = 8.7e-16
Identity = 64/274 (23.36%), Postives = 126/274 (45.99%), Query Frame = 1

Query: 51  QIHARIFRNGHQADSLLLTSMMDLYSHCGKPEE---ACKLFDEVPQKDVVAWNVLISCLT 110
           QIHA + R     +S +    +   +    P +   +C++F +     +   N +I   +
Sbjct: 29  QIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFS 88

Query: 111 RNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTE 170
            ++   +   LF  ++  + L   + ++    L+ C     L  G +IHG I   G+ ++
Sbjct: 89  LSQTPCEGFRLFRSLRRNSSL-PANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSD 148

Query: 171 SNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQK 230
           S L  +L+ +YS C     A +VFD++ +++ VSW+ + S    N   R+ +  F +M+ 
Sbjct: 149 SLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKN 208

Query: 231 N---GVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAG 290
           +    V+P   T    L AC++ G +D G    D +  E  ++  ++    +V +  R G
Sbjct: 209 DVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI-DENGLSGALNLSNTLVSMYSRCG 268

Query: 291 MLDQAYELIMSMEVRPDATMWRTLLGACRIHGHG 319
            +D+AY++   M  R +   W  L+    ++G G
Sbjct: 269 SMDKAYQVFYGMRER-NVVSWTALISGLAMNGFG 299

BLAST of Cucsa.197710.1 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 429.9 bits (1104), Expect = 2.2e-120
Identity = 210/508 (41.34%), Postives = 325/508 (63.98%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M+  Y+ + +  E L +++DM +  VR D  +    V +C +  S+  G Q+H  I  +G
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF- 120
             ++  ++ +++DLYS CG+ E AC LF+ +P KDV++WN LI   T     ++AL LF 
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356

Query: 121 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQH--GYNTESNLCNSLISM 180
           E+++S      P+ VT L +L ACA L A++ G  IH YI +   G    S+L  SLI M
Sbjct: 357 EMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 416

Query: 181 YSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTF 240
           Y++CG ++ A++VF+ +  K++ SW+AMI G +M+G    + + F  M+K G++P D TF
Sbjct: 417 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 476

Query: 241 TAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSME 300
             +LSACSH G++D G   F  M Q++ + P + HYGC++DLLG +G+  +A E+I  ME
Sbjct: 477 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 536

Query: 301 VRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTE 360
           + PD  +W +LL AC++HG+  LGE   E+LI+++ +  G YVLL NIY+SAG W++V +
Sbjct: 537 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 596

Query: 361 LRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAE 420
            R L+ +KG+   P C++IE++ VVH+F + D  HP   +IY  L+E+   L+ AG+  +
Sbjct: 597 TRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPD 656

Query: 421 MSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISS 480
            S  L  +E + K  AL +HSEKLAIAFG+++T PG  + I  N+R C +CH   K IS 
Sbjct: 657 TSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISK 716

Query: 481 VYNRKVVVRDRSRFHHFQEGRCSCNDFW 506
           +Y R+++ RDR+RFHHF++G CSCND+W
Sbjct: 717 IYKREIIARDRTRFHHFRDGVCSCNDYW 741


HSP 2 Score: 151.0 bits (380), Expect = 2.0e-36
Identity = 85/303 (28.05%), Postives = 162/303 (53.47%), Query Frame = 1

Query: 55  RIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRD 114
           ++F      D +  T+++  Y+  G  E A KLFDE+P KDVV+WN +IS        ++
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 249

Query: 115 ALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSL 174
           AL LF+ M       +PD+ T + ++ ACA   ++E G ++H +I  HG+ +   + N+L
Sbjct: 250 ALELFKDMMKTNV--RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL 309

Query: 175 ISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGD 234
           I +YS+CG ++ A  +F+++  K+V+SW+ +I G +     +EA+  F EM ++G  P D
Sbjct: 310 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 369

Query: 235 HTFTAVLSACSHCGLVDEGM---AFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYE 294
            T  ++L AC+H G +D G     + D+  +    A ++     ++D+  + G ++ A++
Sbjct: 370 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR--TSLIDMYAKCGDIEAAHQ 429

Query: 295 LIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQ-EAGDYVLLLNIYSSAG 354
           +  S+ +    + W  ++    +HG  +    +   + ++  Q +   +V LL+  S +G
Sbjct: 430 VFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 487


HSP 3 Score: 97.1 bits (240), Expect = 3.4e-20
Identity = 95/373 (25.47%), Postives = 164/373 (43.97%), Query Frame = 1

Query: 8   SRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNGHQADSLL 67
           S  P   L    D     +R  P  S   + +C  L SL     IHA++ + G    +  
Sbjct: 13  SSYPFHFLPSSSDPPYDSIRNHPSLS--LLHNCKTLQSLRI---IHAQMIKIGLHNTNYA 72

Query: 68  LTSMMD---LYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQS 127
           L+ +++   L  H      A  +F  + + +++ WN +      +     AL L+  M S
Sbjct: 73  LSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 132

Query: 128 PTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQ-------------------QHGYN 187
              L  P+  T   +L++CA   A + G++IHG++                    Q+G  
Sbjct: 133 LGLL--PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 192

Query: 188 TESNLC------------NSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNG 247
            +++               +LI  Y+  G ++ A ++FD++  K+VVSW+AMISG +  G
Sbjct: 193 EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETG 252

Query: 248 HGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHY 307
           + +EA+E F +M K  V P + T   V+SAC+  G ++ G         +     N+   
Sbjct: 253 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-VHLWIDDHGFGSNLKIV 312

Query: 308 GCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNL-GERIVEHLIELK 346
             ++DL  + G L+ A  L   +  + D   W TL+G    + H NL  E ++     L+
Sbjct: 313 NALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLR 372


HSP 4 Score: 72.8 bits (177), Expect = 6.9e-13
Identity = 84/355 (23.66%), Postives = 150/355 (42.25%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M R ++LS  P+  L +Y  M   G+  +  +  F +KSC K  +   G QIH  + + G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
              D  + TS++ +Y   G+ E+A K+FD+ P +DVV++  LI          +A  LF+
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
            +        P K             + + +   I GY +   Y     L   ++    R
Sbjct: 225 EI--------PVK-------------DVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 284

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
                      D+ T   VVS  A    + +   GR+     W +  +G         A+
Sbjct: 285 P----------DESTMVTVVSACAQSGSIEL---GRQV--HLW-IDDHGFGSNLKIVNAL 344

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCI-VDLLGRAGMLDQAYELIMSMEVR 300
           +   S CG ++     F+R+  + +I+ N    G   ++L   A +L Q  E++ S E  
Sbjct: 345 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ--EMLRSGETP 404

Query: 301 PDATMWRTLLGACRIHGHGNLGERI---VEHLIELKSQEAGDYVLLLNIYSSAGN 352
            D TM  ++L AC   G  ++G  I   ++  ++  +  +     L+++Y+  G+
Sbjct: 405 NDVTM-LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419

BLAST of Cucsa.197710.1 vs. TAIR10
Match: AT4G21065.1 (AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 423.7 bits (1088), Expect = 1.6e-118
Identity = 208/507 (41.03%), Postives = 318/507 (62.72%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQG-VRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRN 60
           ++R Y+   + +    +YR+M   G V  D  +  F +K+   +  +  G  IH+ + R+
Sbjct: 91  LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150

Query: 61  GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 120
           G  +   +  S++ LY++CG    A K+FD++P+KD+VAWN +I+    N +  +AL L+
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210

Query: 121 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYS 180
             M S     +PD  T + LL ACA + AL  G+R+H Y+ + G     +  N L+ +Y+
Sbjct: 211 TEMNSKGI--KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 270

Query: 181 RCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKN-GVEPGDHTFT 240
           RCGR+++A  +FD+M +KN VSW+++I GL++NG G+EAIE F  M+   G+ P + TF 
Sbjct: 271 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 330

Query: 241 AVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEV 300
            +L ACSHCG+V EG  +F RMR+E+ I P + H+GC+VDLL RAG + +AYE I SM +
Sbjct: 331 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 390

Query: 301 RPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTEL 360
           +P+  +WRTLLGAC +HG  +L E     +++L+   +GDYVLL N+Y+S   W  V ++
Sbjct: 391 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 450

Query: 361 RKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEM 420
           RK M   G+   P  + +E+   VH+F + D SHP  D IY +L E+  +L+  GY  ++
Sbjct: 451 RKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 510

Query: 421 SSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSV 480
           S+    +E ++K  A+  HSEK+AIAF +++TP    I +  N+R C DCH   K +S V
Sbjct: 511 SNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKV 570

Query: 481 YNRKVVVRDRSRFHHFQEGRCSCNDFW 506
           YNR++VVRDRSRFHHF+ G CSC D+W
Sbjct: 571 YNREIVVRDRSRFHHFKNGSCSCQDYW 595


HSP 2 Score: 121.7 bits (304), Expect = 1.3e-27
Identity = 87/294 (29.59%), Postives = 146/294 (49.66%), Query Frame = 1

Query: 37  VKSCIKLLSLLFGI-------QIHARIFRNGHQADSLLLTSMMDLY--SHCGKP--EEAC 96
           V+ CI LL   +G+       QIHA   R+G       L   +  Y  S    P    A 
Sbjct: 15  VEKCINLLQT-YGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 74

Query: 97  KLFDEVPQK-DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACA 156
           K+F ++ +  +V  WN LI        +  A  L+  M+  + L +PD  T   L++A  
Sbjct: 75  KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRV-SGLVEPDTHTYPFLIKAVT 134

Query: 157 DLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSA 216
            +  +  GE IH  + + G+ +   + NSL+ +Y+ CG +  AY+VFDKM EK++V+W++
Sbjct: 135 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 194

Query: 217 MISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEF 276
           +I+G + NG   EA+  + EM   G++P   T  ++LSAC+  G +  G      M  + 
Sbjct: 195 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKV 254

Query: 277 MIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHG 319
            +  N+H    ++DL  R G +++A  L   M V  ++  W +L+    ++G G
Sbjct: 255 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFG 304

BLAST of Cucsa.197710.1 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 409.5 bits (1051), Expect = 3.1e-114
Identity = 197/452 (43.58%), Postives = 302/452 (66.81%), Query Frame = 1

Query: 55  RIFRNGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRD 114
           R+F    + D++  T+M+D Y+     E A ++ + +PQKD+VAWN LIS   +N +  +
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347

Query: 115 ALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSL 174
           AL +F  +Q    + + +++T +  L ACA + ALE G  IH YI++HG     ++ ++L
Sbjct: 348 ALIVFHELQLQKNM-KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 407

Query: 175 ISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGD 234
           I MYS+CG ++K+ EVF+ + +++V  WSAMI GL+M+G G EA++ F++MQ+  V+P  
Sbjct: 408 IHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 467

Query: 235 HTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIM 294
            TFT V  ACSH GLVDE  + F +M   + I P   HY CIVD+LGR+G L++A + I 
Sbjct: 468 VTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 527

Query: 295 SMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDK 354
           +M + P  ++W  LLGAC+IH + NL E     L+EL+ +  G +VLL NIY+  G W+ 
Sbjct: 528 AMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWEN 587

Query: 355 VTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGY 414
           V+ELRK M+  G+   P C++IE++G++H+F   D +HPM +K+Y +L E+ ++LK  GY
Sbjct: 588 VSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 647

Query: 415 EAEMSSELHRLEPKD-KGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAK 474
           E E+S  L  +E ++ K  +L+ HSEKLAI +G+++T   + IR+  N+R C DCH+ AK
Sbjct: 648 EPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAK 707

Query: 475 YISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 506
            IS +Y+R+++VRDR RFHHF+ G+CSCNDFW
Sbjct: 708 LISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738


HSP 2 Score: 135.6 bits (340), Expect = 8.7e-32
Identity = 99/397 (24.94%), Postives = 184/397 (46.35%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQG-VRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRN 60
           ++RAY+    P+  ++ + DM  +     +  +  F +K+  ++ SL  G  +H    ++
Sbjct: 101 LIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKS 160

Query: 61  GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 120
              +D  +  S++  Y  CG  + ACK+F  + +KDVV+WN +I+   +      AL LF
Sbjct: 161 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF 220

Query: 121 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYN---TESNL------ 180
           + M+S     +   VT + +L ACA +  LEFG ++  YI+++  N   T +N       
Sbjct: 221 KKMESEDV--KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 280

Query: 181 -CNSL---------------------ISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISG 240
            C S+                     +  Y+     + A EV + M +K++V+W+A+IS 
Sbjct: 281 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 340

Query: 241 LSMNGHGREAIEAFWEMQ-KNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIA 300
              NG   EA+  F E+Q +  ++    T  + LSAC+  G ++ G      +++   I 
Sbjct: 341 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH-GIR 400

Query: 301 PNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEH 360
            N H    ++ +  + G L+++ E+  S+E R D  +W  ++G   +HG GN    +   
Sbjct: 401 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKR-DVFVWSAMIGGLAMHGCGNEAVDMFYK 460

Query: 361 LIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKE 365
           + E   +  G  V   N++ +  +   V E   L  +
Sbjct: 461 MQEANVKPNG--VTFTNVFCACSHTGLVDEAESLFHQ 491


HSP 3 Score: 121.7 bits (304), Expect = 1.3e-27
Identity = 81/275 (29.45%), Postives = 137/275 (49.82%), Query Frame = 1

Query: 37  VKSCIKLLSLLFGIQIHARIFRNGHQADSLLLTSM--MDLYSHCGKPEEACKLFDEVPQK 96
           ++ C+ L  L    Q H  + R G  +D    + +  M   S     E A K+FDE+P+ 
Sbjct: 37  IERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 96

Query: 97  DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGER 156
           +  AWN LI           ++  F  M S +  C P+K T   L++A A++++L  G+ 
Sbjct: 97  NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQ-CYPNKYTFPFLIKAAAEVSSLSLGQS 156

Query: 157 IHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGH 216
           +HG   +    ++  + NSLI  Y  CG +D A +VF  + EK+VVSW++MI+G    G 
Sbjct: 157 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 216

Query: 217 GREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYG 276
             +A+E F +M+   V+    T   VLSAC+    ++ G      + +E  +  N+    
Sbjct: 217 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI-EENRVNVNLTLAN 276

Query: 277 CIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLL 310
            ++D+  + G ++ A  L  +ME + + T W T+L
Sbjct: 277 AMLDMYTKCGSIEDAKRLFDAMEEKDNVT-WTTML 305


HSP 4 Score: 69.7 bits (169), Expect = 5.8e-12
Identity = 46/217 (21.20%), Postives = 108/217 (49.77%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQ-GVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRN 60
           ++ AY  +  P E L ++ +++ Q  ++ + ++    + +C ++ +L  G  IH+ I ++
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394

Query: 61  GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 120
           G + +  + ++++ +YS CG  E++ ++F+ V ++DV  W+ +I  L  +    +A+ +F
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454

Query: 121 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERI-HGYIQQHGYNTESNLCNSLISMY 180
             MQ      +P+ VT   +  AC+    ++  E + H     +G   E      ++ + 
Sbjct: 455 YKMQEAN--VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 514

Query: 181 SRCGRMDKAYEVFDKMTEKNVVS-WSAMISGLSMNGH 215
            R G ++KA +  + M      S W A++    ++ +
Sbjct: 515 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549


HSP 5 Score: 66.2 bits (160), Expect = 6.4e-11
Identity = 73/370 (19.73%), Postives = 152/370 (41.08%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M+  +    SP + L +++ ME + V+A  ++    + +C K+ +L FG Q+ + I  N 
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
              +  L  +M+D+Y+ CG  E+A +LFD + +KD V W  ++     ++   D     E
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE---DYEAARE 322

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
           ++ S   + Q D V    L+ A       + G+     I  H    + N+  + I++ S 
Sbjct: 323 VLNS---MPQKDIVAWNALISAYE-----QNGKPNEALIVFHELQLQKNMKLNQITLVS- 382

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
                              +S  A +  L +       I+        G+    H  +A+
Sbjct: 383 ------------------TLSACAQVGALELGRWIHSYIKKH------GIRMNFHVTSAL 442

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSME--- 300
           +   S CG +++    F+ + +      +V  +  ++  L   G  ++A ++   M+   
Sbjct: 443 IHMYSKCGDLEKSREVFNSVEKR-----DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 502

Query: 301 VRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQ-----EAGDYVLLLNIYSSAGNW 360
           V+P+   +  +  AC    H  L +       +++S      E   Y  ++++   +G  
Sbjct: 503 VKPNGVTFTNVFCAC---SHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYL 528

Query: 361 DKVTELRKLM 363
           +K  +  + M
Sbjct: 563 EKAVKFIEAM 528

BLAST of Cucsa.197710.1 vs. TAIR10
Match: AT3G56550.1 (AT3G56550.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 403.3 bits (1035), Expect = 2.2e-112
Identity = 207/507 (40.83%), Postives = 315/507 (62.13%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGV-RADPLSSSFAVKSCIKLLSLLFGIQIHARIFRN 60
           ++R +S S SPL  +  Y  M    V R D  + +FA+KSC ++ S+   ++IH  + R+
Sbjct: 77  LIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRS 136

Query: 61  GHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLF 120
           G   D+++ TS++  YS  G  E A K+FDE+P +D+V+WNV+I C +       AL ++
Sbjct: 137 GFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMY 196

Query: 121 EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYS 180
           + M +   +C  D  T + LL +CA ++AL  G  +H         +   + N+LI MY+
Sbjct: 197 KRMGNEG-VCG-DSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYA 256

Query: 181 RCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTA 240
           +CG ++ A  VF+ M +++V++W++MI G  ++GHG EAI  F +M  +GV P   TF  
Sbjct: 257 KCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLG 316

Query: 241 VLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVR 300
           +L  CSH GLV EG+  F+ M  +F + PNV HYGC+VDL GRAG L+ + E+I +    
Sbjct: 317 LLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCH 376

Query: 301 PDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELR 360
            D  +WRTLLG+C+IH +  LGE  ++ L++L++  AGDYVL+ +IYS+A +      +R
Sbjct: 377 EDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMR 436

Query: 361 KLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMS 420
           KL++   + T P  + IE+   VH+F VDD  HP    IY +L E+  +  +AGY+ E S
Sbjct: 437 KLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDS 496

Query: 421 SE-LHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSV 480
           +     L  +  G A ++HSEKLAIA+G++ T  G T+RI  N+R C DCH+F KY+S  
Sbjct: 497 NRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKA 556

Query: 481 YNRKVVVRDRSRFHHFQEGRCSCNDFW 506
           +NR+++VRDR RFHHF +G CSCND+W
Sbjct: 557 FNREIIVRDRVRFHHFADGICSCNDYW 581


HSP 2 Score: 94.7 bits (234), Expect = 1.7e-19
Identity = 68/271 (25.09%), Postives = 125/271 (46.13%), Query Frame = 1

Query: 51  QIHARIFRNGHQADSLLLTSMMDL--YSHCGKPEEACKLFDEVPQKDVVA-WNVLISCLT 110
           +IH+ +  NG Q    +   ++     S  G    A  LFD        + WN LI   +
Sbjct: 23  KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFS 82

Query: 111 RNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTE 170
            +    +++ LF      + + +PD  T    L++C  + ++     IHG + + G+  +
Sbjct: 83  NSSSPLNSI-LFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDD 142

Query: 171 SNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQK 230
           + +  SL+  YS  G ++ A +VFD+M  +++VSW+ MI   S  G   +A+  +  M  
Sbjct: 143 AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN 202

Query: 231 NGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLD 290
            GV    +T  A+LS+C+H   ++ G+    R+  +      V     ++D+  + G L+
Sbjct: 203 EGVCGDSYTLVALLSSCAHVSALNMGV-MLHRIACDIRCESCVFVSNALIDMYAKCGSLE 262

Query: 291 QAYELIMSMEVRPDATMWRTLLGACRIHGHG 319
            A  +   M  R D   W +++    +HGHG
Sbjct: 263 NAIGVFNGMRKR-DVLTWNSMIIGYGVHGHG 290

BLAST of Cucsa.197710.1 vs. NCBI nr
Match: gi|778655956|ref|XP_011660092.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Cucumis sativus])

HSP 1 Score: 1035.8 bits (2677), Expect = 2.5e-299
Identity = 504/505 (99.80%), Postives = 504/505 (99.80%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIF NG
Sbjct: 98  MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFING 157

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
           HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE
Sbjct: 158 HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 217

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
           IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR
Sbjct: 218 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 277

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
           CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV
Sbjct: 278 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 337

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 300
           LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP
Sbjct: 338 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 397

Query: 301 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 360
           DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK
Sbjct: 398 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 457

Query: 361 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 420
           LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS
Sbjct: 458 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 517

Query: 421 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 480
           ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN
Sbjct: 518 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 577

Query: 481 RKVVVRDRSRFHHFQEGRCSCNDFW 506
           RKVVVRDRSRFHHFQEGRCSCNDFW
Sbjct: 578 RKVVVRDRSRFHHFQEGRCSCNDFW 602

BLAST of Cucsa.197710.1 vs. NCBI nr
Match: gi|659105919|ref|XP_008453206.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Cucumis melo])

HSP 1 Score: 1007.3 bits (2603), Expect = 9.5e-291
Identity = 489/505 (96.83%), Postives = 497/505 (98.42%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           MLRAYS+SRSPLEGLY+YRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIF  G
Sbjct: 81  MLRAYSVSRSPLEGLYVYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFIYG 140

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
           HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE
Sbjct: 141 HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 200

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
           IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQH YNTESNLCNSLISMYSR
Sbjct: 201 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTESNLCNSLISMYSR 260

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
           CGR+DKAYEVFDKM EKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP DHTFTAV
Sbjct: 261 CGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPDDHTFTAV 320

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 300
           LSACSHCGLVDEGMAFFDRMRQE MIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP
Sbjct: 321 LSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 380

Query: 301 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 360
           DATMWRTLLGACRIHGH NLGERIVEHLIELKSQEAGDYVLLLNIYSSAG WDKVTELRK
Sbjct: 381 DATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKWDKVTELRK 440

Query: 361 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 420
           LMKEKGIYTTPCCTTIELNGVVH+FAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS
Sbjct: 441 LMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 500

Query: 421 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 480
           ELHRL+P+DKGYALSNHSEKLAIAFGVLATPPGRTIR+ANNIRTCMDCHNFAKYISSVYN
Sbjct: 501 ELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFAKYISSVYN 560

Query: 481 RKVVVRDRSRFHHFQEGRCSCNDFW 506
           RKVV+RDRSRFHHFQEGRCSCNDFW
Sbjct: 561 RKVVLRDRSRFHHFQEGRCSCNDFW 585

BLAST of Cucsa.197710.1 vs. NCBI nr
Match: gi|645269308|ref|XP_008239939.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Prunus mume])

HSP 1 Score: 777.7 bits (2007), Expect = 1.2e-221
Identity = 361/505 (71.49%), Postives = 437/505 (86.53%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           MLRAYS+S SP EG  MYRD+ R+G+RAD L+SSF +KSCI++ SLL GIQ+HARI R+G
Sbjct: 109 MLRAYSISDSPEEGFSMYRDLLRRGLRADALASSFVIKSCIRVSSLLGGIQVHARILRDG 168

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
           H++DS LLT++MDLYS CGK +EACKLFDE+P++DVVAWNVLISC   N RTRDA+ LF+
Sbjct: 169 HESDSRLLTTLMDLYSICGKCDEACKLFDEMPKRDVVAWNVLISCCLHNNRTRDAVSLFD 228

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
           IM+S T+ C+PD+VTCLL+LQAC++LNALEFGER+H YI++HGY+  SNLCNSLI+MYSR
Sbjct: 229 IMRSETHRCEPDEVTCLLMLQACSNLNALEFGERVHKYIEEHGYDGASNLCNSLIAMYSR 288

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
           CG +DKAYEVF  M +KNVVSWSAMISGL++NG+GREAIEAF EMQ+ GV P D TFT V
Sbjct: 289 CGCLDKAYEVFKGMKDKNVVSWSAMISGLAVNGYGREAIEAFGEMQRMGVLPDDQTFTGV 348

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 300
           L ACSHCGLVDEGM FFDRM ++F + PN+HHYGC+VDLLGRAG LDQAY+LI+SM+++P
Sbjct: 349 LCACSHCGLVDEGMVFFDRMSKDFGVVPNIHHYGCLVDLLGRAGRLDQAYQLILSMDIKP 408

Query: 301 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 360
           D+T+WRTLLG CRIHGH  L E ++ HLIELK+QEAGDYVLL+NIYSSAGNW+K+TE+RK
Sbjct: 409 DSTIWRTLLGGCRIHGHDALAESVIGHLIELKAQEAGDYVLLMNIYSSAGNWEKLTEVRK 468

Query: 361 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 420
            MKEK I TTP C+TIEL GV H+F VDD+SHP KD+IYK LDEIN QLKIAGY A++SS
Sbjct: 469 FMKEKAIQTTPGCSTIELKGVAHEFVVDDVSHPRKDEIYKMLDEINGQLKIAGYVADVSS 528

Query: 421 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 480
           ELH L  ++KG+ALS HSEKLAIAFGVLATPPG  IR+A N+R C+DCHNFA  +S VYN
Sbjct: 529 ELHNLGTEEKGHALSYHSEKLAIAFGVLATPPGTPIRVAKNLRICVDCHNFAMALSGVYN 588

Query: 481 RKVVVRDRSRFHHFQEGRCSCNDFW 506
           R+V++RDR+RFHHF+EGRCSCN +W
Sbjct: 589 REVIIRDRTRFHHFREGRCSCNGYW 613

BLAST of Cucsa.197710.1 vs. NCBI nr
Match: gi|595852202|ref|XP_007210264.1| (hypothetical protein PRUPE_ppa003212mg [Prunus persica])

HSP 1 Score: 776.2 bits (2003), Expect = 3.6e-221
Identity = 360/505 (71.29%), Postives = 435/505 (86.14%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M+RAYS+S SP EG  MYRD+ R+G+RAD L+SSF +KSCI++ SLL GIQ+HARI R G
Sbjct: 88  MVRAYSISDSPEEGFSMYRDLLRRGLRADALASSFVIKSCIRVSSLLGGIQVHARILRGG 147

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
           H++DS LLT++MDLYS CGK +EACKLFDE+P++DVVAWNVLISC   N RTRDA+ LF+
Sbjct: 148 HESDSRLLTTLMDLYSICGKCDEACKLFDEMPKRDVVAWNVLISCCLHNNRTRDAVSLFD 207

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
           IM+S T+ C+PD+VTCLL+LQAC++LNALEFGER+H YI++HGY+  SNLCNSLI+MYSR
Sbjct: 208 IMRSETHRCEPDEVTCLLMLQACSNLNALEFGERVHKYIEEHGYDGASNLCNSLIAMYSR 267

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
           CG +DKAYEVF  M +KNVVSWSAMISGL++NG+GREAIEAF EMQK GV P D TFT V
Sbjct: 268 CGCLDKAYEVFKGMKDKNVVSWSAMISGLAVNGYGREAIEAFGEMQKMGVLPDDQTFTGV 327

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 300
           L ACSHCGLVDEGM FFDRM ++F + PN+HHYGC+VDLLGRAG LDQAY+LI+SM+++P
Sbjct: 328 LCACSHCGLVDEGMVFFDRMSKDFGVVPNIHHYGCMVDLLGRAGRLDQAYQLILSMDIKP 387

Query: 301 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 360
           D+T+WRTLLG CRIHGH  L E ++ HLIELK+QEAGDYVLL+NIYSSAGNW+K+TE+RK
Sbjct: 388 DSTIWRTLLGGCRIHGHDALAESVIGHLIELKAQEAGDYVLLMNIYSSAGNWEKLTEVRK 447

Query: 361 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 420
            MKEK I TTP C+TIEL GV H+F VDD+SHP KD+IY  LDEIN QLKIAGY A++SS
Sbjct: 448 FMKEKAIQTTPGCSTIELKGVAHEFVVDDVSHPRKDEIYNMLDEINSQLKIAGYVADVSS 507

Query: 421 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 480
           ELH L  ++KG+ALS HSEKLAIAFGVLATPPG  IR+A N+R C+DCHNFA  +S VYN
Sbjct: 508 ELHNLGTEEKGHALSYHSEKLAIAFGVLATPPGTPIRVAKNLRICVDCHNFAMVLSGVYN 567

Query: 481 RKVVVRDRSRFHHFQEGRCSCNDFW 506
           R+V++RDR+RFHHF+EGRCSCN +W
Sbjct: 568 REVIIRDRTRFHHFREGRCSCNGYW 592

BLAST of Cucsa.197710.1 vs. NCBI nr
Match: gi|1000975900|ref|XP_015571954.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g47530 isoform X1 [Ricinus communis])

HSP 1 Score: 766.9 bits (1979), Expect = 2.2e-218
Identity = 358/505 (70.89%), Postives = 431/505 (85.35%), Query Frame = 1

Query: 1   MLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFRNG 60
           M+RAYS+S SP+EG Y+Y++M ++G+RADPLS SF +K  +K+ SL+ G+Q+HAR+ R+G
Sbjct: 73  MIRAYSMSSSPIEGFYLYQEMRQKGLRADPLSLSFVIKCFVKVSSLMGGVQVHARLLRDG 132

Query: 61  HQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFE 120
            Q+DSLLLT++MDLYS C K  EAC++FDE+PQ+D VAWNVLISC  RN+RTRD LGLF+
Sbjct: 133 FQSDSLLLTNLMDLYSFCEKGTEACRVFDEIPQRDTVAWNVLISCFIRNQRTRDVLGLFD 192

Query: 121 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSR 180
            M S  + C+PD VTCLLL+QAC++L ALEFGE++H YIQ H Y  ++NLCNSLI+MYSR
Sbjct: 193 DMVSGEFGCEPDDVTCLLLVQACSNLGALEFGEKVHLYIQGHRYGDKTNLCNSLITMYSR 252

Query: 181 CGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAV 240
           CG +DKAY VF  M  KNVV+WSAMISG +MNG+GR+AIE F +MQ+ GV P D TFT V
Sbjct: 253 CGCLDKAYGVFKNMPNKNVVTWSAMISGFAMNGYGRQAIETFGKMQRIGVLPDDQTFTGV 312

Query: 241 LSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRP 300
           LSACSHCGLVDEGM FFD+M QEF IAPN HHYGC+VDLLGRAG LDQAY+LIMSMEVRP
Sbjct: 313 LSACSHCGLVDEGMLFFDKMTQEFGIAPNNHHYGCMVDLLGRAGKLDQAYQLIMSMEVRP 372

Query: 301 DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 360
           D+ +WRTLLGACRIH H  LGER++ HLIELK+QEAGDYVLLLNIYSS GNW+KVTE+RK
Sbjct: 373 DSALWRTLLGACRIHHHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSIGNWEKVTEIRK 432

Query: 361 LMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSS 420
           LMKEKGI TTP C++IEL G VH+F VDD+SHP KD+IY+ LDEINKQLKIAGY AE++S
Sbjct: 433 LMKEKGIETTPGCSSIELKGEVHEFVVDDVSHPRKDEIYEMLDEINKQLKIAGYVAEITS 492

Query: 421 ELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYN 480
           ELH L  ++K + LS HSEKLAIAFGVLATPPG TIRIA N+RTC+DCHNFAK++S VYN
Sbjct: 493 ELHNLSSEEKSHTLSYHSEKLAIAFGVLATPPGTTIRIAKNLRTCVDCHNFAKFLSGVYN 552

Query: 481 RKVVVRDRSRFHHFQEGRCSCNDFW 506
           R+V+VRDR+RFHHF+EG CSCND+W
Sbjct: 553 REVIVRDRTRFHHFREGHCSCNDYW 577

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP267_ARATH1.7e-19464.24Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana GN... [more]
PPR21_ARATH3.9e-11941.34Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
PP330_ARATH2.8e-11741.03Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN... [more]
PP175_ARATH5.5e-11343.58Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
PP284_ARATH3.9e-11140.83Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LUH9_CUCSA1.7e-29999.80Uncharacterized protein OS=Cucumis sativus GN=Csa_1G009750 PE=4 SV=1[more]
M5WQ95_PRUPE2.5e-22171.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003212mg PE=4 SV=1[more]
A0A067K583_JATCU3.7e-21769.70Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11633 PE=4 SV=1[more]
I1JZP1_SOYBN1.5e-21369.90Uncharacterized protein OS=Glycine max GN=GLYMA_05G026400 PE=4 SV=2[more]
A0A0B2SV07_GLYSO7.3e-21369.70Pentatricopeptide repeat-containing protein OS=Glycine soja GN=glysoja_015838 PE... [more]
Match NameE-valueIdentityDescription
AT3G47530.19.4e-19664.24 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.12.2e-12041.34 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G21065.11.6e-11841.03 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.13.1e-11443.58 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G56550.12.2e-11240.83 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778655956|ref|XP_011660092.1|2.5e-29999.80PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Cucumis sativu... [more]
gi|659105919|ref|XP_008453206.1|9.5e-29196.83PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Cucumis melo][more]
gi|645269308|ref|XP_008239939.1|1.2e-22171.49PREDICTED: pentatricopeptide repeat-containing protein At3g47530 [Prunus mume][more]
gi|595852202|ref|XP_007210264.1|3.6e-22171.29hypothetical protein PRUPE_ppa003212mg [Prunus persica][more]
gi|1000975900|ref|XP_015571954.1|2.2e-21870.89PREDICTED: pentatricopeptide repeat-containing protein At3g47530 isoform X1 [Ric... [more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsa.197710Cucsa.197710gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsa.197710.1Cucsa.197710.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.197710.1.five_prime_UTR.1Cucsa.197710.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.197710.1.CDS.1Cucsa.197710.1.CDS.1CDS


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 339..367
score: 0.0015coord: 272..297
score:
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 172..195
score: 3.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 94..144
score: 3.3E-8coord: 197..245
score: 6.3
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 235..263
score: 1.7E-4coord: 170..199
score: 3.3E-7coord: 200..233
score: 8.2E-6coord: 97..124
score: 7.5E-5coord: 339..368
score: 0.002coord: 69..96
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 1..28
score: 7.377coord: 301..331
score: 5.338coord: 64..98
score: 9.668coord: 99..129
score: 5.831coord: 198..232
score: 12.047coord: 167..197
score: 10.326coord: 233..263
score: 8.802coord: 335..369
score: 8.32coord: 269..299
score: 7.783coord: 132..166
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 61..228
score: 1.6E-8coord: 267..355
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..376
score: 1.1E