Cucsa.194350.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TTAATATAACAAATGCTTTAAGCGACGTAAATAATCAACTCATTGTTCACTGCAGATCTGGCGATGATGACTTGAGAGTCCACCAACTCCCACATTTGATAAGCTACACCTTCACTTTTCGACAAAACTCATGGGGTTCGATCTTGTTTTATTTtAAATTTCAATGTTCTAGTTGGTTACATTACTTCAATATTTATAAAGATTCAAGAGAGAATGCGTTGCG TTAATATAACAAATGCTTTAAGCGACGTAAATAATCAACTCATTGTTCACTGCAGATCTGGCGATGATGACTTGAGAGTCCACCAACTCCCACATTTGATAAGCTACACCTTCACTTTTCGACAAAACTCATGGGGTTCGATCTTGTTTTATTTTAAATTTCAATGTTCTAGTTGGTTACATTACTTCAATATTTATAAAGATTCAAGAGAGAATGCGTTGCG TTAATATAACAAATGCTTTAAGCGACGTAAATAATCAACTCATTGTTCACTGCAGATCTGGCGATGATGACTTGAGAGTCCACCAACTCCCACATTTGATAAGCTACACCTTCACTTTTCGACAAAACTCATGGGGTTCGATCTTGTTTTATTTtAAATTTCAATGTTCTAGTTGGTTACATTACTTCAATATTTATAAAGATTCAAGAGAGAATGCGTTGCG NITNALSDVNNQLIVHCRSGDDDLRVHQLPHLISYTFTFRQNSWGSILFYFKFQCSSWLHYFNIYKDSRENALX
BLAST of Cucsa.194350.1 vs. TrEMBL
Match: A0A0A0LI28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G162130 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 3.6e-20 Identity = 48/72 (66.67%), Postives = 53/72 (73.61%), Query Frame = 1
BLAST of Cucsa.194350.1 vs. TrEMBL
Match: A0A067F8M9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039691mg PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.1e-08 Identity = 30/64 (46.88%), Postives = 38/64 (59.38%), Query Frame = 1
BLAST of Cucsa.194350.1 vs. TrEMBL
Match: A0A072VJZ5_MEDTR (Leguminosin group486 secreted peptide OS=Medicago truncatula GN=MTR_1g057370 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.1e-07 Identity = 33/71 (46.48%), Postives = 42/71 (59.15%), Query Frame = 1
BLAST of Cucsa.194350.1 vs. TrEMBL
Match: M5XHU2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022379mg PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.7e-07 Identity = 28/69 (40.58%), Postives = 42/69 (60.87%), Query Frame = 1
BLAST of Cucsa.194350.1 vs. TrEMBL
Match: V4UEP7_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10018205mg PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 4.6e-07 Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 1
BLAST of Cucsa.194350.1 vs. TAIR10
Match: AT1G04645.1 (AT1G04645.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 53.5 bits (127), Expect = 6.3e-08 Identity = 24/61 (39.34%), Postives = 33/61 (54.10%), Query Frame = 1
BLAST of Cucsa.194350.1 vs. NCBI nr
Match: gi|659121598|ref|XP_008460739.1| (PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]) HSP 1 Score: 125.9 bits (315), Expect = 2.8e-26 Identity = 56/71 (78.87%), Postives = 62/71 (87.32%), Query Frame = 1
BLAST of Cucsa.194350.1 vs. NCBI nr
Match: gi|700206411|gb|KGN61530.1| (hypothetical protein Csa_2G162130 [Cucumis sativus]) HSP 1 Score: 105.1 bits (261), Expect = 5.2e-20 Identity = 48/72 (66.67%), Postives = 53/72 (73.61%), Query Frame = 1
BLAST of Cucsa.194350.1 vs. NCBI nr
Match: gi|659121606|ref|XP_008460743.1| (PREDICTED: uncharacterized protein LOC103499506 [Cucumis melo]) HSP 1 Score: 103.6 bits (257), Expect = 1.5e-19 Identity = 47/72 (65.28%), Postives = 53/72 (73.61%), Query Frame = 1
BLAST of Cucsa.194350.1 vs. NCBI nr
Match: gi|659121602|ref|XP_008460741.1| (PREDICTED: uncharacterized protein LOC103499504 [Cucumis melo]) HSP 1 Score: 103.2 bits (256), Expect = 2.0e-19 Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 1
BLAST of Cucsa.194350.1 vs. NCBI nr
Match: gi|659121604|ref|XP_008460742.1| (PREDICTED: uncharacterized protein LOC103499505 [Cucumis melo]) HSP 1 Score: 95.1 bits (235), Expect = 5.4e-17 Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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