Cucsa.194230.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGATCTAAATCTCATTCACCATTTTCTCCCTTTCACTTTCTTCTTCTTCTTCCTACTTCTTACTTCACTTCCTGCTCCAATTCCCCTTCGGATCTCTCTCTCTCTCACTCACAGGTTAGTTCTTCTCCTTTCTACTTTTTTCAATTTTCTACTCACATTCTTTCCGTTTTTCCTTTCTTTTCTTTTCATTCTTTACTCTTTTATTACCTCTCTTCGTTTTTTGTTCTATGTTTGGCTTCACTTGTTTGATCTTCTCTTCTTCTGAAAATTTTTACTCGATCCGATCACATCGGCCTTTCATAATCTGATTTGAATCCTCAATCCATTCCTTTTTGAGGTTCTATTCTGCAAATCTCACCATTTCTTATGGATAAGTTGTTATTGCCTTTTGCATCATTTCTTCACTTTCGCTGGTTTCTTTAATTTTATGAACTCTCATTAGTTTAGTAGACTTTTAGAAACTTTAATAACTTGTAATTTGTCTCTCGAACGTCTGATCTGAGTCTCTAGAATTTTGGTTCATGTTGCTGAGTCAAACTATGCATTTTTCTTATGCACCATTTCATTTGTTTACTTTATCATCCAATTACATCTTTGTCATTTTACAACCCGACCGAATATGAGAATGGTTCTAAATTTTTGCATTTGTAATTTGCAATGAAGTTATGGCATCTTCTGATAAACCTGAGATCGTGGAAAGAGGTGACAAAGGAAAAGACAACAAGGAAGATGAAAGTGAAGGGAAGGGTGGATTCCTTGACAAAGTTAAAGATTTCATTCACGACATCGGTGAAAAGATTGAAGAAACGATCGGTTTTGGGAAGCCGACGGCCGATGTCAGTGGGATTCATATTCCATCCATCAGTCTTGAGAAGGCTGAGATTGTTGTTGATGTTCTAATTAAAAACCCCAATCCTGTCCCTATTCCGCTAGTTGACATTGACTATTTGATAGAGAGTGATGGCAGGAAACTGATCGCTGGGCTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAGACTGTCAAAATTCCTGTGAAGTTGGTTTTTGATGATATAAGGAACACATATCATGACATTAAACCTGGAAGTATCATTCCTTACAAGATCAAGGTTGATCTGATTGTGGATGTCCCTGTTTTTGGTAGGTTGACATTGCCACTTGAGAAAACTGGAGAGATTCCTATTCCTTACAAGCCCGATGTTGATATTGAAAAGATACAGTTTCAGAGATTTTCATTTGAAGAAACTGTTGCCATTCTCCATTTAAAATTGGAGAATAAGAATGACTTTGAGTTGGGATTGAAGGACCTAGACTGTGAAGTCTGGCTCTCTGATGTTAGTATTGGACGTGCGGATCTCTCCGAATTTACACCCATTGATAAAAATGGGATCAGTTACGTTGACTTACCCATCACCTTCAGGCCAAAGGACTTCGGTTCTGCACTTTGGGATATGATTAGAGGACGAGGCACTGGCTACACCATAAAAGGGAATATTCATGTCGACACACCTTTTGGTCAGATGAAGTTGCCCATTGTTAAAGAGGGTGGTACTACACGCCTCAAGAAGAATAAAGAAGATGGCGAAGACGATGATGACGAGGTATGAGATATCTTCTTCTATGTTGTTACTACTGTGTATGAGTACCCTTCAAGTTTCAACATTGCTAAAAACCAAATCCATTTGACCAAAAATAGATTTCCCTTGAAACTTCACACTACTCCATTGCTGATATTTTGCAGATCCTTTAAAGTACTTTATATATCATTAACCATATATAATCTGAAGTCACTATATATCCTTATACAAAATAAGTTATTTAATAACAGAGACCTGCCTCCTTTCCTAGTTTGTTCAGATTTCAATCAAATGAAATCATTCTAACATTAGGAATATAGACTCTATTAGAACTAAAGGTGTGTTTGGTTTGTCTTTTCAATGTTTAATTCTGAAAACAAGATTTTGGAAAAAATTGGAGTGTATAGAAATCACTCAAACTAGCTTCTTAAGCACTTTTTAAAGTTTATTTTAAACTATTTTTGTCAAAATAGTGTGAAACAAAATGATTTTTCTTTTCTGTAATCAATCGAAACCCCCATCTAACAGACTGATAGTTAATGGGTCAAAGGAAGTGTGTTAAGTTAAGGGTCATTTAGTTTGATATTAGAACGGGTCTTATTTATAACTTAGATGATGTGACTTAATTTTTAGAGGGTTAAGTAAATGTAGTAGATATATATATATATATATTTTAAAATGTATTTAACAGCCATGACTGTGAAAGCGATGACTTTTGTTAGAAGTGACTAATGAAAGTAGATGTTATGAATGAATAATGGTGAATTCTATTGCATAAAACTTGTATTTTTTTTTTTTTTGTCTGAGGAGATATATACTTGTCTGACATGAAAGGTAAATTTGTGGATGCAGGAATAAACAAAAGGGGGGCATCATCTGGAGGAGGAATAGTGAGTGGGTAGTTTCTTTTTCCTTTCTCATAAAAAGAAGAATGACGTTGTTCCATTTCCATACATATGTTTATTAAGGGGGGATTGTTTGAGTGAACCTTTGGTTACTTTGATTGTCATGGTCTCCGTGTAACAGACTCTTCCTTTTGTTTTTAACTACTTAGTTTTGGCACTGACTTTGGGTGGTGAATTTCATGTGTTTTTTTAAGATACTGTTTAAATATAGTCATTATTAGCCATTATATAAAAGTCTGTTATTTCGCAAAGACATTTTCATTCAAATCGGTAA TGGATCTAAAtctcattcaccattttctccctttcactttcttcttcttcttcctacttcttacttcacttcctgctccaattccccttcggatctctctctctctcactcacagTTATGGCATCTTCTGATAAACCTGAGATCGTGGAAAGAGGTGACAAAGGAAAAGACAACAAGGAAGATGAAAGTGAAGGGAAGGGTGGATTCCTTGACAAAGTTAAAGATTTCATTCACGACATCGGTGAAAAGATTGAAGAAACGATCGGTTTTGGGAAGCCGACGGCCGATGTCAGTGGGATTCATATTCCATCCATCAGTCTTGAGAAGGCTGAGATTGTTGTTGATGTTCTAATTAAAAACCCCAATCCTGTCCCTATTCCGCTAGTTGACATTGACTATTTGATAGAGAGTGATGGCAGGAAACTGATCGCTGGGCTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAGACTGTCAAAATTCCTGTGAAGTTGGTTTTTGATGATATAAGGAACACATATCATGACATTAAACCTGGAAGTATCATTCCTTACAAGATCAAGGTTGATCTGATTGTGGATGTCCCTGTTTTTGGTAGGTTGACATTGCCACTTGAGAAAACTGGAGAGATTCCTATTCCTTACAAGCCCGATGTTGATATTGAAAAGATACAGTTTCAGAGATTTTCATTTGAAGAAACTGTTGCCATTCTCCATTTAAAATTGGAGAATAAGAATGACTTTGAGTTGGGATTGAAGGACCTAGACTGTGAAGTCTGGCTCTCTGATGTTAGTATTGGACGTGCGGATCTCTCCGAATTTACACCCATTGATAAAAATGGGATCAGTTACGTTGACTTACCCATCACCTTCAGGCCAAAGGACTTCGGTTCTGCACTTTGGGATATGATTAGAGGACGAGGCACTGGCTACACCATAAAAGGGAATATTCATGTCGACACACCTTTTGGTCAGATGAAGTTGCCCATTGTTAAAGAGGGTGGTACTACACGCCTCAAGAAGAATAAAGAAGATGGCGAAGACGATGATGACGAGGTAAATTTGTGGATGCAGGAATAAACAAAAGGGGGGCATCATCTGGAGGAGGAATAGTGAGTGGGTAGTTTCTTTTTCCTTTCTCATAAAAAGAAGAATGACGTTGTTCCATTTCCATACATATGTTTATTAAGGGGGGATTGTTTGAGTGAACCTTTGGTTACTTTGATTGTCATGGTCTCCGTGTAACAGACTCTTCCTTTTGTTTTTAACTACTTAGTTTTGGCACTGACTTTGGGTGGTGAATTTCATGTGTTTTTTTAAGATACTGTTTAAATATAGTCATTATTAGCCATTATATAAAAGTCTGTTATTTCGCAAAGACATTTTCATTCAAATCGGTAA ATGGCATCTTCTGATAAACCTGAGATCGTGGAAAGAGGTGACAAAGGAAAAGACAACAAGGAAGATGAAAGTGAAGGGAAGGGTGGATTCCTTGACAAAGTTAAAGATTTCATTCACGACATCGGTGAAAAGATTGAAGAAACGATCGGTTTTGGGAAGCCGACGGCCGATGTCAGTGGGATTCATATTCCATCCATCAGTCTTGAGAAGGCTGAGATTGTTGTTGATGTTCTAATTAAAAACCCCAATCCTGTCCCTATTCCGCTAGTTGACATTGACTATTTGATAGAGAGTGATGGCAGGAAACTGATCGCTGGGCTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAGACTGTCAAAATTCCTGTGAAGTTGGTTTTTGATGATATAAGGAACACATATCATGACATTAAACCTGGAAGTATCATTCCTTACAAGATCAAGGTTGATCTGATTGTGGATGTCCCTGTTTTTGGTAGGTTGACATTGCCACTTGAGAAAACTGGAGAGATTCCTATTCCTTACAAGCCCGATGTTGATATTGAAAAGATACAGTTTCAGAGATTTTCATTTGAAGAAACTGTTGCCATTCTCCATTTAAAATTGGAGAATAAGAATGACTTTGAGTTGGGATTGAAGGACCTAGACTGTGAAGTCTGGCTCTCTGATGTTAGTATTGGACGTGCGGATCTCTCCGAATTTACACCCATTGATAAAAATGGGATCAGTTACGTTGACTTACCCATCACCTTCAGGCCAAAGGACTTCGGTTCTGCACTTTGGGATATGATTAGAGGACGAGGCACTGGCTACACCATAAAAGGGAATATTCATGTCGACACACCTTTTGGTCAGATGAAGTTGCCCATTGTTAAAGAGGGTGGTACTACACGCCTCAAGAAGAATAAAGAAGATGGCGAAGACGATGATGACGAGGTAAATTTGTGGATGCAGGAATAA MASSDKPEIVERGDKGKDNKEDESEGKGGFLDKVKDFIHDIGEKIEETIGFGKPTADVSGIHIPSISLEKAEIVVDVLIKNPNPVPIPLVDIDYLIESDGRKLIAGLIPDAGTIHAHGEETVKIPVKLVFDDIRNTYHDIKPGSIIPYKIKVDLIVDVPVFGRLTLPLEKTGEIPIPYKPDVDIEKIQFQRFSFEETVAILHLKLENKNDFELGLKDLDCEVWLSDVSIGRADLSEFTPIDKNGISYVDLPITFRPKDFGSALWDMIRGRGTGYTIKGNIHVDTPFGQMKLPIVKEGGTTRLKKNKEDGEDDDDEVNLWMQE*
BLAST of Cucsa.194230.1 vs. Swiss-Prot
Match: LEA14_SOYBN (Desiccation protectant protein Lea14 homolog OS=Glycine max PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.6e-18 Identity = 47/152 (30.92%), Postives = 82/152 (53.95%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. Swiss-Prot
Match: LEA14_GOSHI (Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum GN=LEA14-A PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.1e-17 Identity = 48/152 (31.58%), Postives = 81/152 (53.29%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. Swiss-Prot
Match: LEA14_ARATH (Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana GN=LEA14 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. Swiss-Prot
Match: LEA2R_ARATH (Desiccation-related protein At2g46140 OS=Arabidopsis thaliana GN=At2g46140 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.9e-13 Identity = 43/157 (27.39%), Postives = 75/157 (47.77%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. Swiss-Prot
Match: DRPD_CRAPL (Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.4e-13 Identity = 40/152 (26.32%), Postives = 79/152 (51.97%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. TrEMBL
Match: A0A0A0LID3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G151040 PE=4 SV=1) HSP 1 Score: 638.6 bits (1646), Expect = 4.0e-180 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. TrEMBL
Match: B9T526_RICCO (Late embryogenesis abundant protein Lea14-A, putative OS=Ricinus communis GN=RCOM_0211380 PE=4 SV=1) HSP 1 Score: 539.3 bits (1388), Expect = 3.3e-150 Identity = 260/315 (82.54%), Postives = 293/315 (93.02%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. TrEMBL
Match: A0A067KCH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19252 PE=4 SV=1) HSP 1 Score: 536.6 bits (1381), Expect = 2.1e-149 Identity = 258/317 (81.39%), Postives = 293/317 (92.43%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. TrEMBL
Match: V4TPB1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020871mg PE=4 SV=1) HSP 1 Score: 536.2 bits (1380), Expect = 2.8e-149 Identity = 255/316 (80.70%), Postives = 290/316 (91.77%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. TrEMBL
Match: A0A067E7B9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018706mg PE=4 SV=1) HSP 1 Score: 536.2 bits (1380), Expect = 2.8e-149 Identity = 255/316 (80.70%), Postives = 290/316 (91.77%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. TAIR10
Match: AT2G44060.1 (AT2G44060.1 Late embryogenesis abundant protein, group 2) HSP 1 Score: 493.8 bits (1270), Expect = 8.0e-140 Identity = 238/324 (73.46%), Postives = 280/324 (86.42%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. TAIR10
Match: AT1G01470.1 (AT1G01470.1 Late embryogenesis abundant protein) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16 Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. TAIR10
Match: AT2G46140.1 (AT2G46140.1 Late embryogenesis abundant protein) HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14 Identity = 43/157 (27.39%), Postives = 75/157 (47.77%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. NCBI nr
Match: gi|449442405|ref|XP_004138972.1| (PREDICTED: uncharacterized protein LOC101217348 [Cucumis sativus]) HSP 1 Score: 638.6 bits (1646), Expect = 5.7e-180 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. NCBI nr
Match: gi|659114748|ref|XP_008457211.1| (PREDICTED: uncharacterized protein LOC103496938 [Cucumis melo]) HSP 1 Score: 627.9 bits (1618), Expect = 1.0e-176 Identity = 309/315 (98.10%), Postives = 312/315 (99.05%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. NCBI nr
Match: gi|255585293|ref|XP_002533345.1| (PREDICTED: uncharacterized protein LOC8261701 [Ricinus communis]) HSP 1 Score: 539.3 bits (1388), Expect = 4.7e-150 Identity = 260/315 (82.54%), Postives = 293/315 (93.02%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. NCBI nr
Match: gi|720070781|ref|XP_010277854.1| (PREDICTED: uncharacterized protein LOC104612204 [Nelumbo nucifera]) HSP 1 Score: 538.5 bits (1386), Expect = 8.0e-150 Identity = 256/316 (81.01%), Postives = 294/316 (93.04%), Query Frame = 1
BLAST of Cucsa.194230.1 vs. NCBI nr
Match: gi|802676232|ref|XP_012081906.1| (PREDICTED: uncharacterized protein LOC105641870 [Jatropha curcas]) HSP 1 Score: 536.6 bits (1381), Expect = 3.0e-149 Identity = 258/317 (81.39%), Postives = 293/317 (92.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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