Cucsa.189540.2 (mRNA) Cucumber (Gy14) v1

NameCucsa.189540.2
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionMYB transcription factor
Locationscaffold01305 : 356095 .. 358291 (+)
Sequence length1284
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGATGTAACTATGTAAGTAGTACTACAAAGTAGGAAACCCCCCAAAGGCCGGCCTCCCCTTGTTTTTAGTGTAATAAAATCATGGCCGCTTCGAAGTCGAAGGTGTGCGGGAGAGGGCACTGGCGGCCGGCGGAGGACACCAAGCTGAAGGAACTGGTGGGCCTTTACGGACCGCAAAACTGGAACCTGATCGCTGAGAAACTGGAGGGAAGATCTGGAAAGAGTTGTAGATTGAGATGGTTTAACCAACTGGACCCAAGGATCAACAGAAAAGCTTTCACGGAAGAGGAAGAGGAGAGGCTAATGCAAGCTCATGAAATGTATGGTAATAAATGGGCTATGATTGCAAGGCTTTTTCCTGGACGTACAGATAATGGTGTCAAGAATCATTGGCATGTCGTAATGGCTAGAAATTGTAGACAACATTTTAGTTCTTACAGGAGATCGTCAAGGAACCTCACTCACTCACTTTCAATTGCTTCCTCTGCCCTTCCTACGCCCCcTCTTCCTCCCACTCGCTCCCTCTCACGTCCCAATCACTTGCCTTTTCATCTTCTCCCCcGACCTGGTGCGATTATTACTATTTTTCTTTCTGTCTTCTTTTtCTTAATTATCATTTTTATTCACATCATCCTATATCTTCAGATTATTGGGTTCAGACTTATTAATTTATGACTTAACATTCTTTTTGTAGCTCGTGAGAGAGTTGATTATACTTTTAGATTTCAACATGAAAAAGGGTGATTTATTTTCTTTTAACTTTTGTATTATGTTTAAACTCAAAAGGTTTTTTGAGCTATGCTATGCAAACATGTAGTCCTCTAAACTATAGCTTTTGAATTATTGCTCATGCGAAAACTTAATTGTGTTTCAAACTAATGTTTTTtATTATTATTATTATTATTTTTTAATATTTAGTGGTTGAATGTGCTACACTTGTTTTGTGAAGTCTAGTCAGATATTTAATAATTAAAATTTATTCTGTGCAATATAATATTTATTAAATAATTTCATTTATTTTTTAAAATGTTGCATAAGAGGAGTACACTTTAATTAAAATTGGAACAGTCAATTTTTATGATTTTCAGTTTCAGATATGGAGAACATTTGAATGTAAATGGGGTGACTCATCTATTGCGCAACCCAGACAGCATCCATATGCTCCTTTCACAACTTTTGTTTTTtAGTTTAAAGATGGAGTTTTCATTAGATGTTTGATGGAATAGAAACGAAGGGaTTttTTTTTTTTTTTCCTTtTtCtCATCTTTtCCTTATAATAAAATAAACTGAATATAGTGACACATGTTTTATTTTAGCTTATTAATATTAATTCTATGGCATGTTTCTCTATTTTGTTATGAAATGGTGAATGGTAATGGACACAGCAAATTATGGACAGATTCTCTTGGAATGAATTGCAGTGACGTATTCAGTTTAGTAAGAGGATTGAACTAAGACATTATTAAAATTGGATTAAATTACTTGTTGTGAGTTTCTAAGAGATATTTTGTGTACATAGGCTCAGAAACAAGCAACGAAATGGAAGTTATATCATCCTACAGCTGCAACAAAACGAGCTCAAACCATGAGAATCAAACTTGCAACAACATTCATTACTGTCCATCATATATCATGACCGAAATGCAACAAAGGAGCAACTACAGTTACAACTCTCATTGCCAGATTCCAAAAGCATGGGATCACCATATTATTGGAAGCGAGGGATCATCATCAGTGAGCGAGGAAAACGGAGTTGGCAATATTTCAGAGGGGATGGTGGTAGTGGAACCGGTGTTTATCGACTTTCTAGGAGTAGGAGGCAGATGAAAGGGTCCAAGGGAAAAAAaGAAAAGGGTGGCTTCATCTTTATTATCATTATTTTTTtGGTTGCAAATTGCAATCATCAGAAGTGGCCTGAATGCGGGTGTGGTCCAGAGATTTGGAAGAGGCCATAACAAGTAATTGAGAGCAAAAGTAAAGAGGAGATGATTTGAGTTGGACTGTAGGAGTGGTGAAAAGATATGGCAGTCAGTGCCATTGAAAGCGCTTTATGAATATATATATAAATCCCAAAACTCAAACCATCATTTTCTTCTTTTTCTGCACATAATGAATGTGATGGCCAGTGGCTTATATTCCCAAGATTATCCATTTCTTACACTGCTCTTTACTTTTGATATCACCCATTTCACTCCC

mRNA sequence

TGGATGTAACTATGTAAGTAGTACTACAAAGTAGGAAACCCCCCAAAGGCCGGCCTCCCCTTGTTTTTAGTGTAATAAAATCATGGCCGCTTCGAAGTCGAAGGTGTGCGGGAGAGGGCACTGGCGGCCGGCGGAGGACACCAAGCTGAAGGAACTGGTGGGCCTTTACGGACCGCAAAACTGGAACCTGATCGCTGAGAAACTGGAGGGAAGATCTGGAAAGAGTTGTAGATTGAGATGGTTTAACCAACTGGACCCAAGGATCAACAGAAAAGCTTTCACGGAAGAGGAAGAGGAGAGGCTAATGCAAGCTCATGAAATGTATGGTAATAAATGGGCTATGATTGCAAGGCTTTTTCCTGGACGTACAGATAATGGTGTCAAGAATCATTGGCATGTCGTAATGGCTAGAAATTGTAGACAACATTTTAGTTCTTACAGGAGATCGTCAAGGAACCTCACTCACTCACTTTCAATTGCTTCCTCTGCCCTTCCTACGCCCCCTCTTCCTCCCACTCGCTCCCTCTCACGTCCCAATCACTTGCCTTTTCATCTTCTCCCCCGACCTGATTCTCTTGGAATGAATTGCAGTGACGTATTCAGTTTAGCTCAGAAACAAGCAACGAAATGGAAGTTATATCATCCTACAGCTGCAACAAAACGAGCTCAAACCATGAGAATCAAACTTGCAACAACATTCATTACTGTCCATCATATATCATGACCGAAATGCAACAAAGGAGCAACTACAGTTACAACTCTCATTGCCAGATTCCAAAAGCATGGGATCACCATATTATTGGAAGCGAGGGATCATCATCAGTGAGCGAGGAAAACGGAGTTGGCAATATTTCAGAGGGGATGGTGGTAGTGGAACCGGTGTTTATCGACTTTCTAGGAGTAGGAGGCAGATGAAAGGGTCCAAGGGAAAAAAAGAAAAGGGTGGCTTCATCTTTATTATCATTATTTTTTTGGTTGCAAATTGCAATCATCAGAAGTGGCCTGAATGCGGGTGTGGTCCAGAGATTTGGAAGAGGCCATAACAAGTAATTGAGAGCAAAAGTAAAGAGGAGATGATTTGAGTTGGACTGTAGGAGTGGTGAAAAGATATGGCAGTCAGTGCCATTGAAAGCGCTTTATGAATATATATATAAATCCCAAAACTCAAACCATCATTTTCTTCTTTTTCTGCACATAATGAATGTGATGGCCAGTGGCTTATATTCCCAAGATTATCCATTTCTTACACTGCTCTTTACTTTTGATATCACCCATTTCACTCCC

Coding sequence (CDS)

ATGGCCGCTTCGAAGTCGAAGGTGTGCGGGAGAGGGCACTGGCGGCCGGCGGAGGACACCAAGCTGAAGGAACTGGTGGGCCTTTACGGACCGCAAAACTGGAACCTGATCGCTGAGAAACTGGAGGGAAGATCTGGAAAGAGTTGTAGATTGAGATGGTTTAACCAACTGGACCCAAGGATCAACAGAAAAGCTTTCACGGAAGAGGAAGAGGAGAGGCTAATGCAAGCTCATGAAATGTATGGTAATAAATGGGCTATGATTGCAAGGCTTTTTCCTGGACGTACAGATAATGGTGTCAAGAATCATTGGCATGTCGTAATGGCTAGAAATTGTAGACAACATTTTAGTTCTTACAGGAGATCGTCAAGGAACCTCACTCACTCACTTTCAATTGCTTCCTCTGCCCTTCCTACGCCCCcTCTTCCTCCCACTCGCTCCCTCTCACGTCCCAATCACTTGCCTTTTCATCTTCTCCCCcGACCTGATTCTCTTGGAATGAATTGCAGTGACGTATTCAGTTTAGCTCAGAAACAAGCAACGAAATGGAAGTTATATCATCCTACAGCTGCAACAAAACGAGCTCAAACCATGAGAATCAAACTTGCAACAACATTCATTACTGTCCATCATATATCATGA

Protein sequence

MAASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRSSRNLTHSLSIASSALPTPPLPPTRSLSRPNHLPFHLLPRPDSLGMNCSDVFSLAQKQATKWKLYHPTAATKRAQTMRIKLATTFITVHHIS*
BLAST of Cucsa.189540.2 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-30
Identity = 56/102 (54.90%), Postives = 74/102 (72.55%), Query Frame = 1

Query: 11  RGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAFTEEE 70
           +G W P ED +L+ LV  YGP+NW +I++ + GRSGKSCRLRW NQL P++  + F+ EE
Sbjct: 6   KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEE 65

Query: 71  EERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNC 113
           +E + +AH  +GNKWA IARL  GRTDN VKNHW+  + R C
Sbjct: 66  DETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKC 107

BLAST of Cucsa.189540.2 vs. Swiss-Prot
Match: MYB_CHICK (Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-28
Identity = 62/165 (37.58%), Postives = 92/165 (55.76%), Query Frame = 1

Query: 11  RGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAFTEEE 70
           +G W   ED ++ ELV  YGP+ W++IA+ L+GR GK CR RW N L+P + + ++TEEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 71  EERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRSSRNL---- 130
           +  + QAH+  GN+WA IA+L PGRTDN +KNHW+  M R   Q       S   L    
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKAGLPSAT 211

Query: 131 ------THSLSIASSALPTPPLPPTRSLSRPNHLPFHLLPRPDSL 166
                 +H ++ A +  P  PLP        +  P++ +  P ++
Sbjct: 212 TGFQKSSHLMAFAHNP-PAGPLPGAGQAPLGSDYPYYHIAEPQNV 255


HSP 2 Score: 72.4 bits (176), Expect = 6.8e-12
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 1

Query: 10  GRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAFTEE 69
           G+  W   ED KLK+LV   G ++W +IA  L  R+   C+ RW   L+P + +  +T+E
Sbjct: 39  GKTRWTREEDEKLKKLVEQNGTEDWKVIASFLPNRTDVQCQHRWQKVLNPELIKGPWTKE 98

Query: 70  EEERLMQAHEMYGNK-WAMIARLFPGRTDNGVKNHWH 106
           E++R+++  + YG K W++IA+   GR     +  WH
Sbjct: 99  EDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135

BLAST of Cucsa.189540.2 vs. Swiss-Prot
Match: MYB_BOVIN (Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 64/156 (41.03%), Postives = 90/156 (57.69%), Query Frame = 1

Query: 11  RGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAFTEEE 70
           +G W   ED ++ ELV  YGP+ W++IA+ L+GR GK CR RW N L+P + + ++TEEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 71  EERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQH---FSSYRRSSRNLT 130
           +  + QAH+  GN+WA IA+L PGRTDN +KNHW+  M R   Q      S + S   +T
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVT 211

Query: 131 HSLSIAS------SALPTPPLPPTRSLSRPNHLPFH 158
            S    S       A P+  LPP    S  +  P++
Sbjct: 212 TSFQKNSHLMGFTHAPPSAQLPPAGQPSVNSDYPYY 247


HSP 2 Score: 72.0 bits (175), Expect = 8.8e-12
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 1

Query: 10  GRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAFTEE 69
           G+  W   ED KLK+LV   G  +W +IA  L  R+   C+ RW   L+P + +  +T+E
Sbjct: 39  GKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKE 98

Query: 70  EEERLMQAHEMYGNK-WAMIARLFPGRTDNGVKNHWH 106
           E++R+++  + YG K W++IA+   GR     +  WH
Sbjct: 99  EDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135

BLAST of Cucsa.189540.2 vs. Swiss-Prot
Match: MYBA_HUMAN (Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 59/134 (44.03%), Postives = 80/134 (59.70%), Query Frame = 1

Query: 11  RGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAFTEEE 70
           +G W   ED ++ ELV  YGP+ W+LIA+ L+GR GK CR RW N L+P + + ++TEEE
Sbjct: 87  KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEE 146

Query: 71  EERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQH-----FSSYRRSSRN 130
           +  + +AH+  GN+WA IA+L PGRTDN +KNHW+  M R   Q           RSS  
Sbjct: 147 DRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEGYLQDGIKSERSSSK 206

Query: 131 LTHSLSIASSALPT 140
           L H    A   + T
Sbjct: 207 LQHKPCAAMDHMQT 220


HSP 2 Score: 76.6 bits (187), Expect = 3.6e-13
Identity = 37/100 (37.00%), Postives = 58/100 (58.00%), Query Frame = 1

Query: 7   KVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAF 66
           K+  R  W   ED KLK+LV  +G  +W LIA  L+ RS   C+ RW   L+P + +  +
Sbjct: 31  KLWNRVKWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRWQKVLNPELIKGPW 90

Query: 67  TEEEEERLMQAHEMYGNK-WAMIARLFPGRTDNGVKNHWH 106
           T+EE++R+++  + YG K W++IA+   GR     +  WH
Sbjct: 91  TKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWH 130

BLAST of Cucsa.189540.2 vs. Swiss-Prot
Match: MYB_HUMAN (Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 1

Query: 11  RGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAFTEEE 70
           +G W   ED ++ ELV  YGP+ W++IA+ L+GR GK CR RW N L+P + + ++TEEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 71  EERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQH---FSSYRRSSRNLT 130
           +  + QAH+  GN+WA IA+L PGRTDN +KNHW+  M R   Q      S + S   + 
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVA 211

Query: 131 HSLSIASSALPTPPLPPTRSL 149
            S    S  +     PPT  L
Sbjct: 212 TSFQKNSHLMGFAQAPPTAQL 232


HSP 2 Score: 72.0 bits (175), Expect = 8.8e-12
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 1

Query: 10  GRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAFTEE 69
           G+  W   ED KLK+LV   G  +W +IA  L  R+   C+ RW   L+P + +  +T+E
Sbjct: 39  GKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKE 98

Query: 70  EEERLMQAHEMYGNK-WAMIARLFPGRTDNGVKNHWH 106
           E++R+++  + YG K W++IA+   GR     +  WH
Sbjct: 99  EDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWH 135

BLAST of Cucsa.189540.2 vs. TrEMBL
Match: A0A0A0LHV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100550 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 7.1e-93
Identity = 166/174 (95.40%), Postives = 167/174 (95.98%), Query Frame = 1

Query: 1   MAASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPR 60
           MAASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPR
Sbjct: 1   MAASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPR 60

Query: 61  INRKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYR 120
           INRKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYR
Sbjct: 61  INRKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYR 120

Query: 121 RSSRNLTHSLSIASSALPTPPLPPTRSLSRPNHLPFHLLPRPDSLGMNCSDVFS 175
           RSSRNLTHSLSIASSALPTPPLPPTRSLSRPNHLPFHLLPRP S   N  +V S
Sbjct: 121 RSSRNLTHSLSIASSALPTPPLPPTRSLSRPNHLPFHLLPRPGSETSNEMEVIS 174

BLAST of Cucsa.189540.2 vs. TrEMBL
Match: D9ZJ60_MALDO (MYB domain class transcription factor OS=Malus domestica GN=MYB32 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.7e-59
Identity = 111/156 (71.15%), Postives = 126/156 (80.77%), Query Frame = 1

Query: 3   ASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 62
           + +SK+C RGHWRPAED+KLKELV LYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN
Sbjct: 29  SGQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 88

Query: 63  RKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRS 122
           R+AFTEEEEERLMQAH +YGNKWAMIARLFPGRTDN VKNHWHV+MAR  R+  S+YRR 
Sbjct: 89  RRAFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRR 148

Query: 123 S------RNLTHSLSIASSALPTPPLPPTRSLSRPN 153
                  R++  + S  +++  T P PP   LS PN
Sbjct: 149 KLNQTVYRSMEENPSFNAASRSTEPPPPYNGLSLPN 184

BLAST of Cucsa.189540.2 vs. TrEMBL
Match: A0A078ILC5_BRANA (BnaC05g51000D protein OS=Brassica napus GN=BnaC05g51000D PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-57
Identity = 109/156 (69.87%), Postives = 121/156 (77.56%), Query Frame = 1

Query: 2   AASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRI 61
           ++SK  V GRGHWRPAED KLKELV +YGPQNWNLIAEKL+GRSGKSCRLRWFNQLDPRI
Sbjct: 78  SSSKPSVLGRGHWRPAEDVKLKELVAIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRI 137

Query: 62  NRKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRR 121
           NR+AFTEEEEERLMQAH +YGNKWAMIARLFPGRTDN VKNHWHV+MAR  R+H S+YRR
Sbjct: 138 NRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKYREHSSAYRR 197

Query: 122 SSRNLTHSLSIASSALPTPPLPPTRSLSRPNHLPFH 158
               + + L       P+P  P   S       PFH
Sbjct: 198 RKLIINNPLKPHLPNHPSPNCPSFISTKHYFTRPFH 233

BLAST of Cucsa.189540.2 vs. TrEMBL
Match: A0A0S3R1P8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G218200 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.8e-57
Identity = 125/223 (56.05%), Postives = 143/223 (64.13%), Query Frame = 1

Query: 6   SKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKA 65
           SK+C RGHWRPAED+KLKELV LYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINR+A
Sbjct: 132 SKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRA 191

Query: 66  FTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRS--- 125
           F+EEEEERLMQAH +YGNKWAMIARLFPGRTDN VKNHWHV+MAR  R+  S+YRR    
Sbjct: 192 FSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLS 251

Query: 126 -------SRNLTHS-LSIASSALPTPPLPPTRSLSRPN--------------HLPFHLLP 185
                    N T S +S  ++   T P PP   LS PN                PFH + 
Sbjct: 252 QSVYRRVEENTTSSNVSRDTATAGTEPPPPPYCLSLPNGGLANNNMPSFPYAAAPFHGVA 311

Query: 186 RPD------SLGMNCSDVFSLAQKQATKWKLYHPTAATKRAQT 198
            P         G+N S   + +++  +  KL  P  A    QT
Sbjct: 312 APPGGGGGVEYGLNGSPHMAASKEAISTTKLAPPHIAMYPQQT 354

BLAST of Cucsa.189540.2 vs. TrEMBL
Match: A0A0L9TM14_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g119300 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.8e-57
Identity = 125/223 (56.05%), Postives = 143/223 (64.13%), Query Frame = 1

Query: 6   SKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKA 65
           SK+C RGHWRPAED+KLKELV LYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINR+A
Sbjct: 132 SKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRA 191

Query: 66  FTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRS--- 125
           F+EEEEERLMQAH +YGNKWAMIARLFPGRTDN VKNHWHV+MAR  R+  S+YRR    
Sbjct: 192 FSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLS 251

Query: 126 -------SRNLTHS-LSIASSALPTPPLPPTRSLSRPN--------------HLPFHLLP 185
                    N T S +S  ++   T P PP   LS PN                PFH + 
Sbjct: 252 QSVYRRVEENTTSSNVSRDTATAGTEPPPPPYCLSLPNGGLANNNMPSFPYAAAPFHGVA 311

Query: 186 RPD------SLGMNCSDVFSLAQKQATKWKLYHPTAATKRAQT 198
            P         G+N S   + +++  +  KL  P  A    QT
Sbjct: 312 APPGGGGGVEYGLNGSPHMAASKEAISTTKLAPPHIAMYPQQT 354

BLAST of Cucsa.189540.2 vs. TAIR10
Match: AT1G26780.2 (AT1G26780.2 myb domain protein 117)

HSP 1 Score: 225.3 bits (573), Expect = 3.5e-59
Identity = 102/120 (85.00%), Postives = 110/120 (91.67%), Query Frame = 1

Query: 2   AASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRI 61
           ++SK  V GRGHWRPAED KLKELV +YGPQNWNLIAEKL+GRSGKSCRLRWFNQLDPRI
Sbjct: 89  SSSKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRI 148

Query: 62  NRKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRR 121
           NR+AFTEEEEERLMQAH +YGNKWAMIARLFPGRTDN VKNHWHVVMAR  R+H S+YRR
Sbjct: 149 NRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRR 208

BLAST of Cucsa.189540.2 vs. TAIR10
Match: AT1G69560.1 (AT1G69560.1 myb domain protein 105)

HSP 1 Score: 218.4 bits (555), Expect = 4.3e-57
Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 1

Query: 3   ASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 62
           +SK+ V  RGHWRPAEDTKLKELV +YGPQNWNLIAEKL+GRSGKSCRLRWFNQLDPRIN
Sbjct: 100 SSKASV-SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRIN 159

Query: 63  RKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRR 122
           R+AFTEEEEERLMQAH +YGNKWAMIARLFPGRTDN VKNHWHV+MAR  R+  SSYRR
Sbjct: 160 RRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSSYRR 217

BLAST of Cucsa.189540.2 vs. TAIR10
Match: AT5G17800.1 (AT5G17800.1 myb domain protein 56)

HSP 1 Score: 191.4 bits (485), Expect = 5.6e-49
Identity = 84/109 (77.06%), Postives = 94/109 (86.24%), Query Frame = 1

Query: 6   SKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKA 65
           +KVC RGHWRP ED KLKELV  +GPQNWNLI+  L GRSGKSCRLRWFNQLDPRIN++A
Sbjct: 88  TKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKRA 147

Query: 66  FTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQ 115
           FTEEEE RL+ AH  YGNKWA+I+RLFPGRTDN VKNHWHV+MAR  R+
Sbjct: 148 FTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

BLAST of Cucsa.189540.2 vs. TAIR10
Match: AT3G29020.2 (AT3G29020.2 myb domain protein 110)

HSP 1 Score: 191.4 bits (485), Expect = 5.6e-49
Identity = 85/125 (68.00%), Postives = 102/125 (81.60%), Query Frame = 1

Query: 4   SKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINR 63
           S S+VC RGHWR +EDT+L ELV +YGPQNWN IAE ++GR+GKSCRLRWFNQLDPRIN+
Sbjct: 60  SVSRVCSRGHWRISEDTQLMELVSVYGPQNWNHIAESMQGRTGKSCRLRWFNQLDPRINK 119

Query: 64  KAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRSS 123
           +AF++EEEERL+ AH  +GNKWAMIA+LF GRTDN +KNHWHV+MAR  RQ  SSY +  
Sbjct: 120 RAFSDEEEERLLAAHRAFGNKWAMIAKLFNGRTDNALKNHWHVLMARKMRQQSSSYVQRF 179

Query: 124 RNLTH 129
               H
Sbjct: 180 NGSAH 184

BLAST of Cucsa.189540.2 vs. TAIR10
Match: AT1G73410.1 (AT1G73410.1 myb domain protein 54)

HSP 1 Score: 189.1 bits (479), Expect = 2.8e-48
Identity = 89/128 (69.53%), Postives = 102/128 (79.69%), Query Frame = 1

Query: 8   VCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRKAFT 67
           +C RGHWRPAED KLK+LV  YGP NWN IA KL GRSGKSCRLRWFNQLDPRINR  FT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 68  EEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRSSRNLT 127
           EEEEERL+ AH ++GN+W++IARLFPGRTDN VKNHWHV+MAR  RQ  +S  R   + T
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ--TSKPRLLPSTT 122

Query: 128 HSLSIASS 136
            S S+ +S
Sbjct: 123 SSSSLMAS 128

BLAST of Cucsa.189540.2 vs. NCBI nr
Match: gi|449442435|ref|XP_004138987.1| (PREDICTED: transcription factor MYB44 [Cucumis sativus])

HSP 1 Score: 348.2 bits (892), Expect = 1.0e-92
Identity = 166/174 (95.40%), Postives = 167/174 (95.98%), Query Frame = 1

Query: 1   MAASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPR 60
           MAASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPR
Sbjct: 1   MAASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPR 60

Query: 61  INRKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYR 120
           INRKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYR
Sbjct: 61  INRKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYR 120

Query: 121 RSSRNLTHSLSIASSALPTPPLPPTRSLSRPNHLPFHLLPRPDSLGMNCSDVFS 175
           RSSRNLTHSLSIASSALPTPPLPPTRSLSRPNHLPFHLLPRP S   N  +V S
Sbjct: 121 RSSRNLTHSLSIASSALPTPPLPPTRSLSRPNHLPFHLLPRPGSETSNEMEVIS 174

BLAST of Cucsa.189540.2 vs. NCBI nr
Match: gi|659082191|ref|XP_008441713.1| (PREDICTED: transcription factor MYB44 [Cucumis melo])

HSP 1 Score: 323.2 bits (827), Expect = 3.5e-85
Identity = 154/165 (93.33%), Postives = 157/165 (95.15%), Query Frame = 1

Query: 1   MAASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPR 60
           M  SKSKVCGRGHWRP EDTKLKELVGLYGPQNWNLIA+KLEGRSGKSCRLRWFNQLDPR
Sbjct: 1   MPGSKSKVCGRGHWRPPEDTKLKELVGLYGPQNWNLIAQKLEGRSGKSCRLRWFNQLDPR 60

Query: 61  INRKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYR 120
           INRKAF+EEEEERLMQAHE+YGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYR
Sbjct: 61  INRKAFSEEEEERLMQAHEIYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYR 120

Query: 121 RSSRNLTHSLSIASSALPTPPLPPT-RSLSRPNHLPFHLLPRPDS 165
           RSSRNL HSLSIASSALPTP L PT RSLSRPNHLPFHLLPRP S
Sbjct: 121 RSSRNLAHSLSIASSALPTPSLLPTARSLSRPNHLPFHLLPRPGS 165

BLAST of Cucsa.189540.2 vs. NCBI nr
Match: gi|302398937|gb|ADL36763.1| (MYB domain class transcription factor [Malus domestica])

HSP 1 Score: 235.3 bits (599), Expect = 9.6e-59
Identity = 111/156 (71.15%), Postives = 126/156 (80.77%), Query Frame = 1

Query: 3   ASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 62
           + +SK+C RGHWRPAED+KLKELV LYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN
Sbjct: 29  SGQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 88

Query: 63  RKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRS 122
           R+AFTEEEEERLMQAH +YGNKWAMIARLFPGRTDN VKNHWHV+MAR  R+  S+YRR 
Sbjct: 89  RRAFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRR 148

Query: 123 S------RNLTHSLSIASSALPTPPLPPTRSLSRPN 153
                  R++  + S  +++  T P PP   LS PN
Sbjct: 149 KLNQTVYRSMEENPSFNAASRSTEPPPPYNGLSLPN 184

BLAST of Cucsa.189540.2 vs. NCBI nr
Match: gi|657994306|ref|XP_008389457.1| (PREDICTED: myb-related protein Hv33-like [Malus domestica])

HSP 1 Score: 235.3 bits (599), Expect = 9.6e-59
Identity = 111/156 (71.15%), Postives = 126/156 (80.77%), Query Frame = 1

Query: 3   ASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 62
           + +SK+C RGHWRPAED+KLKELV LYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN
Sbjct: 121 SGQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 180

Query: 63  RKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRS 122
           R+AFTEEEEERLMQAH +YGNKWAMIARLFPGRTDN VKNHWHV+MAR  R+  S+YRR 
Sbjct: 181 RRAFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRR 240

Query: 123 S------RNLTHSLSIASSALPTPPLPPTRSLSRPN 153
                  R++  + S  +++  T P PP   LS PN
Sbjct: 241 KLNQTVYRSMEENPSFNAASRSTEPPPPYNGLSLPN 276

BLAST of Cucsa.189540.2 vs. NCBI nr
Match: gi|694361131|ref|XP_009360326.1| (PREDICTED: transcription factor MYB108-like [Pyrus x bretschneideri])

HSP 1 Score: 233.4 bits (594), Expect = 3.7e-58
Identity = 112/155 (72.26%), Postives = 124/155 (80.00%), Query Frame = 1

Query: 3   ASKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 62
           + +SK+C RGHWRPAED+KLKELV LYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN
Sbjct: 29  SGQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRIN 88

Query: 63  RKAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQHFSSYRRS 122
           R+AFTEEEEERLMQ H +YGNKWAMIARLFPGRTDN VKNHWHV+MAR  R+  S+YRR 
Sbjct: 89  RRAFTEEEEERLMQTHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRR 148

Query: 123 SRNLTHSLSIA-----SSALPTPPLPPTRSLSRPN 153
             N T   S+      ++A  T P PP   LS PN
Sbjct: 149 KLNQTVYRSMEENPSFNAASSTEPPPPYGGLSLPN 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MYB44_ARATH1.4e-3054.90Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1[more]
MYB_CHICK3.9e-2837.58Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1[more]
MYB_BOVIN1.1e-2741.03Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1[more]
MYBA_HUMAN2.0e-2744.03Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2[more]
MYB_HUMAN2.0e-2742.55Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0LHV6_CUCSA7.1e-9395.40Uncharacterized protein OS=Cucumis sativus GN=Csa_2G100550 PE=4 SV=1[more]
D9ZJ60_MALDO6.7e-5971.15MYB domain class transcription factor OS=Malus domestica GN=MYB32 PE=2 SV=1[more]
A0A078ILC5_BRANA2.2e-5769.87BnaC05g51000D protein OS=Brassica napus GN=BnaC05g51000D PE=4 SV=1[more]
A0A0S3R1P8_PHAAN4.8e-5756.05Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G218200 PE=... [more]
A0A0L9TM14_PHAAN4.8e-5756.05Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g119300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G26780.23.5e-5985.00 myb domain protein 117[more]
AT1G69560.14.3e-5784.87 myb domain protein 105[more]
AT5G17800.15.6e-4977.06 myb domain protein 56[more]
AT3G29020.25.6e-4968.00 myb domain protein 110[more]
AT1G73410.12.8e-4869.53 myb domain protein 54[more]
Match NameE-valueIdentityDescription
gi|449442435|ref|XP_004138987.1|1.0e-9295.40PREDICTED: transcription factor MYB44 [Cucumis sativus][more]
gi|659082191|ref|XP_008441713.1|3.5e-8593.33PREDICTED: transcription factor MYB44 [Cucumis melo][more]
gi|302398937|gb|ADL36763.1|9.6e-5971.15MYB domain class transcription factor [Malus domestica][more]
gi|657994306|ref|XP_008389457.1|9.6e-5971.15PREDICTED: myb-related protein Hv33-like [Malus domestica][more]
gi|694361131|ref|XP_009360326.1|3.7e-5872.26PREDICTED: transcription factor MYB108-like [Pyrus x bretschneideri][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsa.189540Cucsa.189540gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsa.189540.2Cucsa.189540.2-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.189540.2.five_prime_UTR.1Cucsa.189540.2.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.189540.2.CDS.1Cucsa.189540.2.CDS.1CDS
Cucsa.189540.2.CDS.2Cucsa.189540.2.CDS.2CDS
Cucsa.189540.2.CDS.3Cucsa.189540.2.CDS.3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.189540.2.three_prime_UTR.1Cucsa.189540.2.three_prime_UTR.1three_prime_UTR


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 11..56
score: 2.0E-15coord: 63..106
score: 3.8
IPR001005SANT/Myb domainSMARTSM00717santcoord: 10..59
score: 1.7E-13coord: 62..110
score: 7.6
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 12..64
score: 8.8E-26coord: 65..111
score: 4.2
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 11..104
score: 1.31
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 6..57
score: 17.236coord: 58..112
score: 26
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 11..155
score: 1.8
NoneNo IPR availablePANTHERPTHR10641:SF473MYB TRANSCRIPTION FACTORcoord: 11..155
score: 1.8