Cucsa.178090.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCAGAGTGTGAAAGCTGAAACACCCAAAAAGCTTCTCTAAACTTTTTGCTTTTTTTCTCTTACCTCTGATTTGCTCATCACTTTCTTTCTTTTTCCCTGCTTCCATTGCCCTAATCAGAACCTTCAAATTCCTAAACAAATTTCTTCAAAAAGTCAAAAATATCCATTGCCTTCTTCTTCTTCTTTCTCATTCTCATCCTCTTCTTTTGGCCTTTTTTCTTTGGCTTCTTCTTCTTCTTCTTCTTCTCTCTCTTATGGAAGTCTCTGTAAGTAACTCTTTCCCATTTTCCTCTCTCCTTCTTTTTTTCTTCTTCGTCTGTCTCTACTATAGATCTCTATCTGTTGAGTTTCGTTTCATTTCATTTCAATTTACATTTCTCTGTTTATTTTTTTTTTATTTAAGATTTATTCGAACAGAAACAGTGGCCAAATCCACTTGCAACACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCTAAAGATTTGCCGATCACTCAGTATTTCGAAACAGCTCGTCAAGCTGGTTTGATCCGCTACAGTTCCTCCTCCGGAGAAAGTGGCCCCTGCCCGCCTCCTTCCGACTTGTACTCCGCCGATCGGATGAAACCTCCGCCACTCCCCACCACCGTACGCAAGGTCTCCATCTCTCTCTTAATTGTTTACCTCCGATTACAACGACGAATTGTATCTCTCTGTTTCTTTCCAGTACTGAGTTTAGACTAAATGGAAGGGATGAGGGAATTTTCCGAGAAAATGTAGCTATATTTTTCTAGGGAAACAAACAAGGAATTTGTTAGAGTTCCTTTTTTTTTTTTCTTTTTTGATTGAATTAAATCACGGGAAATTGGGTTGGTGAAAGGAATGAAACGCGAAATGAATGAGGGTGAGAGTTAGGGTATGGAATATAAGTATTGAGACACGTGGCGGGACTTTGCAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAAGAACATCATCAGATTCCAATAAAGAAACAGCAAATGATGATGATGCAGCAAGGCGGGAGAGTGTTCGACGTGACGGAAACGGGGGGAGCCCGAAAATTGAAGCAAAACGACGTCTCTTCCATTTCCCGTCCTCCGCCTAGATCCAATCTTACTACAATTCCTAAACCTGTTGATGAAGATCTCTACAAAATACCACCTGAACTACTCCATTCTTCCAAGCGGGTATTTCCTTTCCCTCCTTTTCCTACCTTCTTTTTTTTTTTTTTTATTATTATTATTATTAGTTTCCTCTCTACCTCAATCCACATTATCTACACTTTTTGTTTTTTTTTTGTATAAATGGTTCATATTTGATTTCTCTACTGTCAATTTAAAGATAATGAAAACTGATCTTTTATTTCTATCACAAAGCAATAGTCAACCTTGAGTTGTCCATTTGCGACTATGGGTCTCCCCGTCGTGAATTGATGAGACATCGAGTGAGAATTTTTTTTAATAATGAGCAAGTTTTTATTTATTTAGAATTTGTGGTGCATCTTGAAATGTTCAGCGTCTCATCAGTTCACGATGGTGTGAACTAGTAATTGCGAATGGACTATAAGAAATATTAATAATTCGTTGATGCTTTGTGACGTACCTAAAAAATTAGTTTTTTTTAAATTTTATTATTGTACTCGAAATTTGAGTCATTTGATAAAAAAAAACAAAGTTTCTATATTCACTATATTGAGTTCGTGATACAAAAAATGGGAAAGGAGAGGATCTTTTTTCCTTTCAAGTTTTTTTAAAATAAATAGTTGGTAATTTTGCAGTTTTGATTAGTGTAGATTGGTATTTATCAAGTATCATTCTTTGAAGAGTATTTGAAAACAAGAGGTTTTATTTAATCAAAGGTAGAATTCATACTTCTACTAATATTTTGTATGTATTTACAATTGTTTTTCAAAAAAAAAAAACAAAAAAACAAACTATTTACTAATGTTTACTATGAATTTGATTACATTTACATTTTTTTTTTACATTTTACTATTTTTGATAATTTTCTTATTCATTATTTATATTTATAATATGAAAGCAATAAAATTACAATTTTAACCATGCGTTAGCTTTGAATTTGTGCCTTTTCTTTGACTGTTTTAAATTTTTTCTAAATTATACTCAAACCTTAATCTATAATTTTGTATCTAGTAGAAGTATAAACTGTATAGATTTTAGAAAATTTTGAGTATTGAAAATATTTATACTTCGGTTCAAAACATCTAACATGGTCTCAAATTATTAGGGTGTCTGAAATGATTAAAGATTTTAAAATATTTATAAACTCTTATTTAGTTCTTGATATAAAGAAAATTTGTCAGTTTTGTTAACAAAGATCTGATCTGATCATTACTTTTGCACTAAAGAGAGAGACAAAGATTCCACTTCAGACTTTCTTAATCATCTGATTATTACTGTTTTTCTTTTTAATTTATTACTTTTTTAGGTTTATTAATTATAAAAATAAAAATGTAAATATTTATCTTTCTTTTGGCTGTATTTGGACGTGAAGAAAGTTCACTGGCCCCTACAACAAAATTATTCATGGGTCAGTACGATAAGTTCTTTGTTTGGTTTTGAATACTTTTCTTGATTGAAAGAGAAGAAATATATCAAATAAATGTTTTTATTTCATTTTAAAACCTAAATGGTGAAAAACTATTTTGGCACCTTTCTTATTTTGAGAAATTATTATTTTGATACTTATATTATGGAGTTTTTTTTTTTTATTTTTATTTTAGTTTATGTTTTTGGTAATGAAATTTCATTAAGTCCTAAATTTAGTCAATAATACTAGTTTATTGTCACATTATTTGAAAATACTTTTTGTATTTATTTGTATGAAAACTATTGTTATTATTTAATTACAAATGTTTGGTTTTTTTACTTAGATTTTATTAACATTTATTTAAATTTACGAGAAAATAGTGTTTTAAGTTAAATTGTTGTTGAAATAGAGATTTTAACTGTAAATACAAATTGATATTAACATCCTTTCAATTTCTTTTTTTTTTTGTTTTTTTATAATACAGAACAAAATGAAGGGGTTGTTTTCAAGGTGTTTGGTACCTGCTTGCAATTAAGAAATTAAATATTGTGGCCCTTATACATTGGAGATCAGCACTATGATATGAGAAATTGTTAATCTATCATATCTAATACCCTTTGTTATTCTATTTTATTTTTTTATTTTTATTTTTTGAACTTTTTTGTTTTAGTTTTAAGAAAATAGAAAGAGAATAGATTTGAATCAGTTGTTCTAATTTTAATGTGATGTAAAAAAGATGTCATATAGGAATGTTG GGCAGAGTGTGAAAGCTGAAACACCCAAAAAGCTTCTCTAAACTTTTTGCTTTTTTTCTCTTACCTCTGATTTGCTCATCACTTTCTTTCTTTTTCCCTGCTTCCATTGCCCTAATCAGAACCTTCAAATTCCTAAACAAATTTCTTCAAAAAGTCAAAAATATCCATTGCcttcttcttcttctttctcattctcatcctcttcttttggccttttttctttggcttcttcttcttcttcttcttctCTCTCTTATGGAAGTCTCTatttattCGAACAGAAACAGTGGCCAAATCCACTTGCAACACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCTAAAGATTTGCCGATCACTCAGTATTTCGAAACAGCTCGTCAAGCTGGTTTGATCCGCTACAGTTCCTCCTCCGGAGAAAGTGGCCCCTGCCCGCCTCCTTCCGACTTGTACTCCGCCGATCGGATGAAACCTCCGCCACTCCCCACCACCGTACGCAAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAAGAACATCATCAGATTCCAATAAAGAAACAGCAAATGATGATGATGCAGCAAGGCGGGAGAGTGTTCGACGTGACGGAAACGGGGGGAGCCCGAAAATTGAAGCAAAACGACGTCTCTTCCATTTCCCGTCCTCCGCCTAGATCCAATCTTACTACAATTCCTAAACCTGTTGATGAAGATCTCTACAAAATACCACCTGAACTACTCCATTCTTCCAAGCGGAACAAAATGAAGGGGTTGTTTTCAAGGTGTTTGGTACCTGCTTGCAATTAAGAAATTAAATATTGTGGCCCTTATACATTGGAGATCAGCACTATGATATGAGAAATTGTTAATCTATCATATCTAATACCCTTTGTTATTCtattttatttttttatttttattttttGAACTTTTTTGTTTTAGTTTTAAGAAAATAGAAAGAGAATAGATTTGAATCAGTTGTTCTAATTTTAATGTGATGTAAAAAAGATGTCATATAGGAATGTTG ATGGAAGTCTCTATTTATTCGAACAGAAACAGTGGCCAAATCCACTTGCAACACCACCAAATCCCGGCGTTTGGAGACTGGGATAAGGCTAAAGATTTGCCGATCACTCAGTATTTCGAAACAGCTCGTCAAGCTGGTTTGATCCGCTACAGTTCCTCCTCCGGAGAAAGTGGCCCCTGCCCGCCTCCTTCCGACTTGTACTCCGCCGATCGGATGAAACCTCCGCCACTCCCCACCACCGTACGCAAGGGACGGGTGAGGGAAAAGCGTTACCCGCATGTGGGATTAAAAGAACATCATCAGATTCCAATAAAGAAACAGCAAATGATGATGATGCAGCAAGGCGGGAGAGTGTTCGACGTGACGGAAACGGGGGGAGCCCGAAAATTGAAGCAAAACGACGTCTCTTCCATTTCCCGTCCTCCGCCTAGATCCAATCTTACTACAATTCCTAAACCTGTTGATGAAGATCTCTACAAAATACCACCTGAACTACTCCATTCTTCCAAGCGGAACAAAATGAAGGGGTTGTTTTCAAGGTGTTTGGTACCTGCTTGCAATTAA MEVSIYSNRNSGQIHLQHHQIPAFGDWDKAKDLPITQYFETARQAGLIRYSSSSGESGPCPPPSDLYSADRMKPPPLPTTVRKGRVREKRYPHVGLKEHHQIPIKKQQMMMMQQGGRVFDVTETGGARKLKQNDVSSISRPPPRSNLTTIPKPVDEDLYKIPPELLHSSKRNKMKGLFSRCLVPACN*
BLAST of Cucsa.178090.1 vs. TrEMBL
Match: A0A0A0LKP3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G082200 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 1.4e-105 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. TrEMBL
Match: A0A0S3S4Y2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G131800 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.0e-34 Identity = 92/173 (53.18%), Postives = 119/173 (68.79%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. TrEMBL
Match: A0A0L9VL48_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g159500 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.1e-33 Identity = 91/173 (52.60%), Postives = 118/173 (68.21%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. TrEMBL
Match: I1NCG0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G250900 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.6e-32 Identity = 89/174 (51.15%), Postives = 110/174 (63.22%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. TrEMBL
Match: A0A0B2S8W7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_001724 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.6e-32 Identity = 89/174 (51.15%), Postives = 110/174 (63.22%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. TAIR10
Match: AT5G18310.2 (AT5G18310.2 unknown protein) HSP 1 Score: 92.0 bits (227), Expect = 4.1e-19 Identity = 66/169 (39.05%), Postives = 90/169 (53.25%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. TAIR10
Match: AT5G48500.1 (AT5G48500.1 unknown protein) HSP 1 Score: 58.2 bits (139), Expect = 6.5e-09 Identity = 59/183 (32.24%), Postives = 79/183 (43.17%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. NCBI nr
Match: gi|778668019|ref|XP_011649025.1| (PREDICTED: uncharacterized protein LOC101218053 [Cucumis sativus]) HSP 1 Score: 390.2 bits (1001), Expect = 2.1e-105 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. NCBI nr
Match: gi|659082375|ref|XP_008441806.1| (PREDICTED: uncharacterized protein LOC103485859 [Cucumis melo]) HSP 1 Score: 375.9 bits (964), Expect = 4.0e-101 Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. NCBI nr
Match: gi|1009166620|ref|XP_015901691.1| (PREDICTED: uncharacterized protein LOC107434719 [Ziziphus jujuba]) HSP 1 Score: 159.5 bits (402), Expect = 5.9e-36 Identity = 103/183 (56.28%), Postives = 114/183 (62.30%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. NCBI nr
Match: gi|965600720|dbj|BAT87898.1| (hypothetical protein VIGAN_05131800 [Vigna angularis var. angularis]) HSP 1 Score: 154.8 bits (390), Expect = 1.5e-34 Identity = 92/173 (53.18%), Postives = 119/173 (68.79%), Query Frame = 1
BLAST of Cucsa.178090.1 vs. NCBI nr
Match: gi|920715615|gb|KOM55703.1| (hypothetical protein LR48_Vigan10g159500 [Vigna angularis]) HSP 1 Score: 151.4 bits (381), Expect = 1.6e-33 Identity = 91/173 (52.60%), Postives = 118/173 (68.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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