Cucsa.168240.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAACTCCCACCTTTATTCATCTGGGAGCATTCCGCATTAGTTTCTACCCTTTCTGCAGTTCACGAAACAAAAAGACTTGGAATTTCGGATTGTTAAGAAAGGAAACGACGACCGGAGGATTCTGCCCTTCCGGTGGACTGATTTCCCTTTCTTTTTGTGTAGTTTCTGTTTGCGCCACCAATTTCAGTGCACGCAAATTTGAACACTGAGTAACAATGGCGGAAGCAGAGACAGGATCAGCTACCGGTAACAGTGGGGGAGTGCCGGAACCGTCGCTTAAAGACAAGGGCAATGAGTTTTTTAAAGCCGGGAACTATCTCAAAGCTGCTGCACTTTACACCCAAGCTATTAAACTAGACCCGTCAAATCACGCTCTTTATAGGTATATTCCTCTTTTCTTTTTGTGCTTGCTTGATACAGTTTGCATAATTAATCAGGATATTATTCTGATGTGGGGTTTTGTTTTGGCACTCTTCAGTTCATTCTGACTACTAGGATTGAATGTGAATGCAATGTTTCTTCTGATCTGAGGTTGTTATCTAAATTTAAAACTCAAATGTTGATCTCCAAGTATCTAATTGACAAGATTAGACTATTCAGTACAAATACCATAATGGGTTGTCCTAGTGCTCTATGAGGGCCAATGTAAAAGTAAAAGGTTTTAAGCAAGGGTACAAATCATGGTAGCCACATGCCTAAGATTTAAGGTTAGAGGTTAGGTGATTGCGTCATGGGAGAATAATTTAAGTGTATGCAAGTTTACTTGGACAGTCATGGATGTGAAATGAAGAGATTGGGAAAATAAAGAATTCAGATTGAACGGTGGATGCTGGCTTATGTTGCCAAACTACTGTCCATGAGTGTGCAACTCATAACCTGTGGGAATTATAGTGATCTTACAAAGAAAATTGAGGAAGGATTGAAGTTTCTTTCGCTCTCTCAATTGCACTGCCATTTCGGTCCCACTTTAACACATTCTACCATTGACCATTAGGCTGGCTCACTACCAAAATGAAAATTTTAACTTGCTTCCAACTAATTCAAAAAAATTTCTGGTGTTTACATTTGTTATTTACTCAATCTCGATCATTAGCGGGGAGTACAGAATGTTAGGAAAATTTTGTTTAGAACCTAAAACTTGATGTTGTGATGATCAGACAACGGATAGTTTTGAAATTATCATACTTCTACTATAACATGTGCTTGTAGGAATTATAAATTGTGCTGATGTACTTTTGGTTTCTCAGCAACCGTGCTGCTGCATTTCTTCATCTAGTTAAGCTTAACAAAGCACTTGCAGATGCTGAGATGACAATTAAATTGAGCCCACAGTGGGAAAAGGTAACAAATTCCTTTCCATGTATTGTTTGAGCCAGATCCTTTCTGGCTCCTGTTGTTGAACTTTGGGCTTTTGATGTGCCACAGGGATATTTCAGAAAGGGATGCATATTGGAAGCCATGGAAAAATATGATGATGTATGTCACATGCTTCCTTCCTGCTTCTTTTGTAGCAACGGTCCTCTTGATGACTATATATGATATTTGCTAATTACTGTGGGATTCTTCTAATAGTTCTAAGTTTCATGTGTAGGCTTTGTCTGCATTTCAAACAGCCTTGCAGTATAATCCACAAAGTGCAGAAGTCTCAAGAAAGATTAAAAGGGTTTCACAATTGGTGAAAGATAAAAAGAGGGCACAAGAAGTGGAGAAAAAGAGATCAAATATAGATATGACGAAACACTTGGATAAGCTGAAATCTGAACTGGTGAGCTGCACCCATGTAACTGATGCTCATTTTCAAAGTATATTCTGCAAATATCTGCTAGGTTATGAAGCTGTCAAATTTTCACATTTCCATGTTTTTAGGGGTGAATTTGCTGACAAATGAGGGATATTCCTTTTCTTTCAAGGATGGCCACTGGCCACTGAAACTAGCTGTTTTGTTTCCATCCTGAAGTTTTCATTAGAATCACTCTCTTTCTATTGCAGTCTGAAAAATATGGCTCAGAAGAATGCTGGAAAGACATATTTTCTTTTCTTGTTGAGACTATGGAGGCTGCTGTTAGATCCTGGCATGAAACGTCTAATGTGGATGCTAAAGTGTACTATCTTCTCGATAACGAAAAGACGGACACTGAAAAATATGCTCCAGTCGTAAACATTGATAAGGTGTTAGCTGTCTACTATTTGCTTGTTCATTCCATTAATAGTTGCACGTATTCCTTTTTGTTCTATTTATTGCTTTGATTAAATTAAGTTAATGAAAGAGTTCTCTTTTAAAGCCATTTGTCCTCAAAACTCTAATATTAATTCTAAATTGTCTATTTGGTTACTAGGAGAAATACTGTAACCATTCTATACCAACTACTCCTGTCGTTTGTGCTATGTAGGCATTTGAATCACCCCACACGCACAGTGACTGTTTTCAATTTTTGAGGAAATATGCTGAGGATTCAGTCTCCCGAGCAGCATGCTTAGTAACTCCCAAAAGCTTGATATCTTACCCACAGGTGAGGTTGAATGCCTTTGTTCCTAACTTTCTACATTTGCCATCATATGGTATATCCATAAAACTTTATTTTTCCGTTGTCATGTTAAACTATATTCTAATTAATCACTTAGTTTACTTGGTTAATTAGGCCACAGAATCAGCTTATATTTCACAAATAACAACTCTGCCACCATTTATTTTGTGTCATTGTGCGAGATTAATTAATTGAACAAATATACTTACTATTTTCATCGAGAAATCTTTGGTGTATTCTTTTCTGACATTTGAAACTCTTTTTCTCTTCCTGTTCTTTTTATGGTGTTATGCTGATAATCTATCGGCCTATGTTACCGTATCTTATCTATGATCTTGCATATCACTCCATTACTCCATGGTAGAGGCTATATTTCTAGTTCAAACCAGAAGACTCCCGAGTAACAGTGTTTACTGTTTAGTGATAGAATCCAAAATACTGAAAGATAAAAACTCTCCCCTCTTGAGCTCACTCAAGTCCAGACCAACTATACTCTTGTCCATTTTCACCCCCTCTCACTCCCTCTATTTAATCAACCTTTGATTGAAAAAAAAAAAATCTCAACAGTAAGTATTGTTTGCAGGTCTGGAAGGGTCAAGGTTCAAGAAAATGGAAGCATGGGCAGCATGATGGTTTCTTTGTGCAGCTCGAAACCCCTTCCTTAAGAAAGCTATGGTTTGTTCCTAGTTCTAGTGAACTGGGACGACCATTGTGCCGGTCTCTTTCTCTCTCTTTCTGTCTCTCTTTCTGTCTCCTGTTGCATTTTAGTGTTTTATCTGGCATATAATTGCAATTATTCTACGCAAAACTGCCATTAAGGAACAGAATCATCCAGCAAGCATGAAATTCACATCAAATGTAGATTTAGAATATCGCACACCCTAGCAGGCATCTACAAATAATTGAAATGTTAGAGATGAATTCTCAACCATTCTTTAGGTGTTTTTAGTTTCAAGTAATATCACATTCATTTTTACTTTCATAATAATTCTATCATTCATATTACAATTTTCCAAATGGAATGTAAAATTTTTCTCATCCTTAGACTATATATGAACGCTAAGTTTTGAACATTACTTTCAGGATTCGATTCAAATTTCTTTGACATTGTTGAACTCTCTTATGCATGAACTAAATATCAACGTTCTATTAAAGTTGAGATCTGTATCCTTTGGTCATCGATATCCATGTCTTACTTTTGTACTTTCTGACTTTGATCATTTTTAGGGATCCTGAGGTTCTGGATATTGCTGCCCATGAATTACTACCGCGCATATTTAAAGAAAAGCTGCTAAGCACTTAGATCCAATAGTAGCCAGAAATAGGTTTGAACTTTTCATACCATCGTAACTTTTTTTCTGAAGAGCACGCTATCGACAAAGCTCCGTACATCTTCCATTACTCCAAGTTTAGAAGGCCGTTTTCAAAATGTTTGCAAGTATTTCACATTCATAACATGGCTACACATACATATTGAATCTCTGGGTAGTTTGAAAATTGAGACATGATTTGGTTTTTTCAGACCATGGAGATTCTTTGTTGTACGATTTCTTTCTTGTTTTGTAGTGTTGCTGAGTGCTTTAGTCCTTTGAGCTTTTCTTAGATTTCATCAGGTTTTGTGTTAAACTTACATCTCAAGAAAGACATCTTTTTTTGGTCTTGTAGTTTGTAAAATGGAATGGATCTCTGTTTTTTGTTTGCTTTAGATAAATTGTCCTTGC GAACTCCCACCTTTATTCATCTGGGAGCATTCCGCATTAGTTTCTACCCTTTCTGCAGTTCACGAAACAAAAAGACTTGGAATTTCGGATTGTTAAGAAAGGAAACGACGACCGGAGGATTCTGCCCTTCCGGTGGACTGATTTCCCTTTCTTTTTGTGTAGTTTCTGTTTGCGCCACCAATTTCAGTGCACGCAAATTTGAACACTGAGTAACAATGGCGGAAGCAGAGACAGGATCAGCTACCGGTAACAGTGGGGGAGTGCCGGAACCGTCGCTTAAAGACAAGGGCAATGAGTTTTTTAAAGCCGGGAACTATCTCAAAGCTGCTGCACTTTACACCCAAGCTATTAAACTAGACCCGTCAAATCACGCTCTTTATAGCAACCGTGCTGCTGCATTTCTTCATCTAGTTAAGCTTAACAAAGCACTTGCAGATGCTGAGATGACAATTAAATTGAGCCCACAGTGGGAAAAGGGATATTTCAGAAAGGGATGCATATTGGAAGCCATGGAAAAATATGATGATGCTTTGTCTGCATTTCAAACAGCCTTGCAGTATAATCCACAAAGTGCAGAAGTCTCAAGAAAGATTAAAAGGGTTTCACAATTGGTGAAAGATAAAAAGAGGGCACAAGAAGTGGAGAAAAAGAGATCAAATATAGATATGACGAAACACTTGGATAAGCTGAAATCTGAACTGTCTGAAAAATATGGCTCAGAAGAATGCTGGAAAGACATATTTTCTTTTCTTGTTGAGACTATGGAGGCTGCTGTTAGATCCTGGCATGAAACGTCTAATGTGGATGCTAAAGTGTACTATCTTCTCGATAACGAAAAGACGGACACTGAAAAATATGCTCCAGTCGTAAACATTGATAAGGCATTTGAATCACCCCACACGCACAGTGACTGTTTTCAATTTTTGAGGAAATATGCTGAGGATTCAGTCTCCCGAGCAGCATGCTTAGTAACTCCCAAAAGCTTGATATCTTACCCACAGGTCTGGAAGGGTCAAGGTTCAAGAAAATGGAAGCATGGGCAGCATGATGGTTTCTTTGTGCAGCTCGAAACCCCTTCCTTAAGAAAGCTATGGTTTGTTCCTAGTTCTAGTGAACTGGGACGACCATTGTGCCGGGATCCTGAGGTTCTGGATATTGCTGCCCATGAATTACTACCGCGCATATTTAAAGAAAAGCTGCTAAGCACTTAGATCCAATAGTAGCCAGAAATAGGTTTGAACTTTTCATACCATCGTAACTTTTTTTCTGAAGAGCACGCTATCGACAAAGCTCCGTACATCTTCCATTACTCCAAGTTTAGAAGGCCGTTTTCAAAATGTTTGCAAGTATTTCACATTCATAACATGGCTACACATACATATTGAATCTCTGGGTAGTTTGAAAATTGAGACATGATTTGGTTTTTTCAGACCATGGAGATTCTTTGTTGTACGATTTCTTTCTTGTTTTGTAGTGTTGCTGAGTGCTTTAGTCCTTTGAGCTTTTCTTAGATTTCATCAGGTTTTGTGTTAAACTTACATCTCAAGAAAGACATCTTTTTTTGGTCTTGTAGTTTGTAAAATGGAATGGATCTCTGTTTTTTGTTTGCTTTAGATAAATTGTCCTTGC ATGGCGGAAGCAGAGACAGGATCAGCTACCGGTAACAGTGGGGGAGTGCCGGAACCGTCGCTTAAAGACAAGGGCAATGAGTTTTTTAAAGCCGGGAACTATCTCAAAGCTGCTGCACTTTACACCCAAGCTATTAAACTAGACCCGTCAAATCACGCTCTTTATAGCAACCGTGCTGCTGCATTTCTTCATCTAGTTAAGCTTAACAAAGCACTTGCAGATGCTGAGATGACAATTAAATTGAGCCCACAGTGGGAAAAGGGATATTTCAGAAAGGGATGCATATTGGAAGCCATGGAAAAATATGATGATGCTTTGTCTGCATTTCAAACAGCCTTGCAGTATAATCCACAAAGTGCAGAAGTCTCAAGAAAGATTAAAAGGGTTTCACAATTGGTGAAAGATAAAAAGAGGGCACAAGAAGTGGAGAAAAAGAGATCAAATATAGATATGACGAAACACTTGGATAAGCTGAAATCTGAACTGTCTGAAAAATATGGCTCAGAAGAATGCTGGAAAGACATATTTTCTTTTCTTGTTGAGACTATGGAGGCTGCTGTTAGATCCTGGCATGAAACGTCTAATGTGGATGCTAAAGTGTACTATCTTCTCGATAACGAAAAGACGGACACTGAAAAATATGCTCCAGTCGTAAACATTGATAAGGCATTTGAATCACCCCACACGCACAGTGACTGTTTTCAATTTTTGAGGAAATATGCTGAGGATTCAGTCTCCCGAGCAGCATGCTTAGTAACTCCCAAAAGCTTGATATCTTACCCACAGGTCTGGAAGGGTCAAGGTTCAAGAAAATGGAAGCATGGGCAGCATGATGGTTTCTTTGTGCAGCTCGAAACCCCTTCCTTAAGAAAGCTATGGTTTGTTCCTAGTTCTAGTGAACTGGGACGACCATTGTGCCGGGATCCTGAGGTTCTGGATATTGCTGCCCATGAATTACTACCGCGCATATTTAAAGAAAAGCTGCTAAGCACTTAG MAEAETGSATGNSGGVPEPSLKDKGNEFFKAGNYLKAAALYTQAIKLDPSNHALYSNRAAAFLHLVKLNKALADAEMTIKLSPQWEKGYFRKGCILEAMEKYDDALSAFQTALQYNPQSAEVSRKIKRVSQLVKDKKRAQEVEKKRSNIDMTKHLDKLKSELSEKYGSEECWKDIFSFLVETMEAAVRSWHETSNVDAKVYYLLDNEKTDTEKYAPVVNIDKAFESPHTHSDCFQFLRKYAEDSVSRAACLVTPKSLISYPQVWKGQGSRKWKHGQHDGFFVQLETPSLRKLWFVPSSSELGRPLCRDPEVLDIAAHELLPRIFKEKLLST*
BLAST of Cucsa.168240.1 vs. Swiss-Prot
Match: HSOP1_ARATH (Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana GN=HOP1 PE=2 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.2e-18 Identity = 45/117 (38.46%), Postives = 73/117 (62.39%), Query Frame = 1
HSP 2 Score: 80.5 bits (197), Expect = 3.8e-14 Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. Swiss-Prot
Match: HSOP3_ARATH (Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana GN=HOP3 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.7e-18 Identity = 41/98 (41.84%), Postives = 64/98 (65.31%), Query Frame = 1
HSP 2 Score: 89.4 bits (220), Expect = 8.3e-17 Identity = 47/144 (32.64%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. Swiss-Prot
Match: HSOP2_ARATH (Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana GN=HOP2 PE=1 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 9.8e-18 Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 1
HSP 2 Score: 83.6 bits (205), Expect = 4.5e-15 Identity = 39/98 (39.80%), Postives = 61/98 (62.24%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. Swiss-Prot
Match: STIP1_CRIGR (Stress-induced-phosphoprotein 1 OS=Cricetulus griseus GN=STIP1 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.7e-17 Identity = 54/153 (35.29%), Postives = 85/153 (55.56%), Query Frame = 1
HSP 2 Score: 89.7 bits (221), Expect = 6.3e-17 Identity = 42/117 (35.90%), Postives = 67/117 (57.26%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. Swiss-Prot
Match: STIP1_HUMAN (Stress-induced-phosphoprotein 1 OS=Homo sapiens GN=STIP1 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.8e-17 Identity = 54/153 (35.29%), Postives = 84/153 (54.90%), Query Frame = 1
HSP 2 Score: 87.8 bits (216), Expect = 2.4e-16 Identity = 41/117 (35.04%), Postives = 66/117 (56.41%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. TrEMBL
Match: A0A0A0LNU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G223130 PE=4 SV=1) HSP 1 Score: 669.5 bits (1726), Expect = 2.2e-189 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. TrEMBL
Match: A0A067KVT9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02220 PE=4 SV=1) HSP 1 Score: 541.2 bits (1393), Expect = 8.9e-151 Identity = 261/331 (78.85%), Postives = 292/331 (88.22%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. TrEMBL
Match: V4S3B3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005444mg PE=4 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 1.2e-150 Identity = 257/311 (82.64%), Postives = 283/311 (91.00%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. TrEMBL
Match: A0A061ELQ6_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_020683 PE=4 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 1.5e-150 Identity = 263/332 (79.22%), Postives = 291/332 (87.65%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. TrEMBL
Match: M5Y4T5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008502mg PE=4 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 1.5e-150 Identity = 262/326 (80.37%), Postives = 287/326 (88.04%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. TAIR10
Match: AT1G04190.1 (AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 506.9 bits (1304), Expect = 9.4e-144 Identity = 246/331 (74.32%), Postives = 286/331 (86.40%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. TAIR10
Match: AT1G12270.1 (AT1G12270.1 stress-inducible protein, putative) HSP 1 Score: 95.5 bits (236), Expect = 6.5e-20 Identity = 45/117 (38.46%), Postives = 73/117 (62.39%), Query Frame = 1
HSP 2 Score: 80.5 bits (197), Expect = 2.2e-15 Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. TAIR10
Match: AT4G12400.2 (AT4G12400.2 stress-inducible protein, putative) HSP 1 Score: 93.2 bits (230), Expect = 3.2e-19 Identity = 41/98 (41.84%), Postives = 64/98 (65.31%), Query Frame = 1
HSP 2 Score: 89.4 bits (220), Expect = 4.7e-18 Identity = 47/144 (32.64%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. TAIR10
Match: AT1G62740.1 (AT1G62740.1 stress-inducible protein, putative) HSP 1 Score: 92.4 bits (228), Expect = 5.5e-19 Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 1
HSP 2 Score: 83.6 bits (205), Expect = 2.6e-16 Identity = 39/98 (39.80%), Postives = 61/98 (62.24%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. TAIR10
Match: AT3G04710.1 (AT3G04710.1 ankyrin repeat family protein) HSP 1 Score: 82.0 bits (201), Expect = 7.5e-16 Identity = 38/101 (37.62%), Postives = 63/101 (62.38%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. NCBI nr
Match: gi|449455294|ref|XP_004145388.1| (PREDICTED: stress-induced-phosphoprotein 1 [Cucumis sativus]) HSP 1 Score: 669.5 bits (1726), Expect = 3.1e-189 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. NCBI nr
Match: gi|659096856|ref|XP_008449324.1| (PREDICTED: E3 ubiquitin-protein ligase CHIP [Cucumis melo]) HSP 1 Score: 658.3 bits (1697), Expect = 7.1e-186 Identity = 323/331 (97.58%), Postives = 329/331 (99.40%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. NCBI nr
Match: gi|1009141346|ref|XP_015888145.1| (PREDICTED: stress-induced-phosphoprotein 1 [Ziziphus jujuba]) HSP 1 Score: 554.7 bits (1428), Expect = 1.1e-154 Identity = 267/327 (81.65%), Postives = 294/327 (89.91%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. NCBI nr
Match: gi|802581388|ref|XP_012069689.1| (PREDICTED: stress-induced-phosphoprotein 1 [Jatropha curcas]) HSP 1 Score: 541.2 bits (1393), Expect = 1.3e-150 Identity = 261/331 (78.85%), Postives = 292/331 (88.22%), Query Frame = 1
BLAST of Cucsa.168240.1 vs. NCBI nr
Match: gi|645235422|ref|XP_008224260.1| (PREDICTED: RNA polymerase II-associated protein 3 [Prunus mume]) HSP 1 Score: 541.2 bits (1393), Expect = 1.3e-150 Identity = 262/326 (80.37%), Postives = 288/326 (88.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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