Cucsa.161260.4 (mRNA) Cucumber (Gy14) v1

Overview
NameCucsa.161260.4
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRegulator of chromosome condensation (RCC1) family protein
Locationscaffold01144 : 1158156 .. 1160200 (+)
Sequence length1832
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCACCCTCAATTTATTCGCAGATGATGGTTCGGTTTGGTGCTGGGGTTACAATATCTGTATCCTTTGAAATGCATTCAGAGGAGAAATTATTAAGCATTCTTACACTATAGCTAGAGAGCATTTCATTTTTCCTTCTTACTGCATATGCCCTTTTTCATCCTTAACTATCATAAAGATGGCCAACTTGGATTTGATGGCGGGAATTCCGCCACCCCCTGCTTGCTGAAGCAGTTCCTTGAGTTGGAACCTCCAGAATCTTTGACAGAAGAATCAGGCTCAAAGAGTAAGGGATCACTAAAGGTCTGTTGGTTGGTTCTTTCCTTGTTTTGATTAATGGATGCTGAACTTTGCTTCTTTGTTTTTGGTTTTGAAGTTTCCATTGCTTCTATATCAGATTTGTGACATCAAAGCTGGGGGGCAGATTTCTTTTGCAATTGACGATCTTGGAGCACTATGGATGTGGGGTAATTGTCCAAAACCAAGCGGTGAGAATGAAGTTGGCTTATCTTATGTTAGCAGCTTCACACCCTCTCCAGTGTGGGAGTTCCATGGCCATACCGTTGTTAAGGTTGCTTGTGGAAATGAGCATATTGTGGCTCTAGTTAGTGTTGGGGAAACCTACAATAAAGCTGAAGACTTAGTTTGCTACTCCTGGGGAGATAATTCTCACGGTCAATTAGGCCTGGGAGATAAAGATAGCAGAGCATGCCCCCAAATTATCGAGACATTTAATGAGGCTTCCCCTTGGGCAGTGTACGAAGTAGCATGCGGGGCATTCCATACTGCTTTACTAAGTCACAGTAAGAGACCATGTGACACCTTAGAAAGTGTGTGTTGGACATTTGGTCTGGGGGAAAACGGACAGCTTGGGCATGGCACCACCCAAAATGAATTCCTTCCTCAGCCTGTAAAAGAGTTGCCACAATCTGTATCTCTGATCTCAGTCGCTTGTGGCCTATTTCATACAAGTGTTGTTTCATCAGGTGGAGATCTGTGGTCTTGGGGAATGGAAAGGGGACTTGGCCTTTGTCCAGATGCTAGTTTTACTGGAACCAACACGGGCGATGCTATATCTCCCCTATCCATCTTCTGTAGTGGCACTGAATCACCAAAATTTTTGGATCCTGTTCAAGTTGCTTGTGGGGCTGCTCATACTGTTATAGTTGCACATGATGGATATAAATTGTGGTCGTGGGGACGAGGAAGAAGCGGGGTTCTTGGTAATGGCAAGGCAGTCGACTGTTTTACTCCCACAGTTGTGTTGTGGCCTCCACTTAATGAGGATTTCGATCAAGAGGAAACTGAAACCAAATGCGAGGAAGATAAAGTTGAAGAAAATAAAACCGAGGAAGATAAAGTTGAAGAAAATAAAATCGAGGAAGTAACCGAAGAAAACAAAAAGCTGTTAATGGCTATGGAGGAAATAAAACTTCTTCTAGATAAATTATCTATCATGGAACGGTATGCAAGCTTTCTTCATGGCTCAATATTTGGAAAACCTTTCCAAGAGGGAGATATCCCACTATCATTGCGAAATTCTGGTTCCTTCGACATTGCTAAGGAATGGGAAAGCATGTTGGAGTCATCAGATCGATCAAATCTTTTAAGGTTGGAGACGGTTTATCAAAATATGCTGGCAAGTATTAAAGACAAGATATTGAAGAAAAGGGTCCAGGAGCTTGTGAAGGAGTTTCTTCAATCAGCAACACCCCCAAATTAGTGTCTCAGACGAACTGTTAATCAGGTATCAAAAAACCGAACATTTTCCAGCTATTCGAATTTTCAAATTTGTCATCGAAGATTATCAGTACTATTATAAATGGAAGGAAATGCATGGAGATGAGGGCCCGCTGAAGCTGAAGCTAAATATTACTGAACAAATATCCTTTTTTGGACCAGAGGTTATGCTTTGTAGAATTGGAATTGCATGTATGTAACAAGTAATAGGAATGCTAAGTTTATTGGACTTATTTTAAGTCAAATAGTTAGTCCTAAATTGTCCCATGTGGCGTTTTAGGTATCTACTTTTTGAGAGATTGGAGT

mRNA sequence

CTCACCCTCAATTTATTCGCAGATGATGGTTCGGTTTGGTGCTGGGGTTACAATATCTATGGCCAACTTGGATTTGATGGCGGGAATTCCGCCACCCCCTGCTTGCTGAAGCAGTTCCTTGAGTTGGAACCTCCAGAATCTTTGACAGAAGAATCAGGCTCAAAGAGTAAGGGATCACTAAAGATTTGTGACATCAAAGCTGGGGGGCAGATTTCTTTTGCAATTGACGATCTTGGAGCACTATGGATGTGGGGTAATTGTCCAAAACCAAGCGGTGAGAATGAAGTTGGCTTATCTTATGTTAGCAGCTTCACACCCTCTCCAGTGTGGGAGTTCCATGGCCATACCGTTGTTAAGGTTGCTTGTGGAAATGAGCATATTGTGGCTCTAGTTAGTGTTGGGGAAACCTACAATAAAGCTGAAGACTTAGTTTGCTACTCCTGGGGAGATAATTCTCACGGTCAATTAGGCCTGGGAGATAAAGATAGCAGAGCATGCCCCCAAATTATCGAGACATTTAATGAGGCTTCCCCTTGGGCAGTGTACGAAGTAGCATGCGGGGCATTCCATACTGCTTTACTAAGTCACAGTAAGAGACCATGTGACACCTTAGAAAGTGTGTGTTGGACATTTGGTCTGGGGGAAAACGGACAGCTTGGGCATGGCACCACCCAAAATGAATTCCTTCCTCAGCCTGTAAAAGAGTTGCCACAATCTGTATCTCTGATCTCAGTCGCTTGTGGCCTATTTCATACAAGTGTTGTTTCATCAGGTGGAGATCTGTGGTCTTGGGGAATGGAAAGGGGACTTGGCCTTTGTCCAGATGCTAGTTTTACTGGAACCAACACGGGCGATGCTATATCTCCCCTATCCATCTTCTGTAGTGGCACTGAATCACCAAAATTTTTGGATCCTGTTCAAGTTGCTTGTGGGGCTGCTCATACTGTTATAGTTGCACATGATGGATATAAATTGTGGTCGTGGGGACGAGGAAGAAGCGGGGTTCTTGGTAATGGCAAGGCAGTCGACTGTTTTACTCCCACAGTTGTGTTGTGGCCTCCACTTAATGAGGATTTCGATCAAGAGGAAACTGAAACCAAATGCGAGGaagataaagttgaagaaaataaaaccgaggaagataaagttgaagaaaataaaatCGAGGAAGTAACCGAAGAAAACAAAAAGCTGTTAATGGCTATGGAGGAAATAAAACTTCTTCTAGATAAATTATCTATCATGGAACGGTATGCAAGCTTTCTTCATGGCTCAATATTTGGAAAACCTTTCCAAGAGGGAGATATCCCACTATCATTGCGAAATTCTGGTTCCTTCGACATTGCTAAGGAATGGGAAAGCATGTTGGAGTCATCAGATCGATCAAATCTTTTAAGGTTGGAGACGGTTTATCAAAATATGCTGGCAAGTATTAAAGACAAGATATTGAAGAAAAGGGTCCAGGAGCTTGTGAAGGAGTTTCTTCAATCAGCAACACCCCCAAATTAGTGTCTCAGACGAACTGTTAATCAGGTATCAAAAAACCGAACATTTTCCAGCTATTCGAATTTTCAAATTTGTCATCGAAGATTATCAGTACTATTATAAATGGAAGGAAATGCATGGAGATGAGGGCCCGCTGAAGCTGAAGCTAAATATTACTGAACAAATATCCTTTTTTGGACCAGAGGTTATGCTTTGTAGAATTGGAATTGCATGTATGTAACAAGTAATAGGAATGCTAAGTTTATTGGACTTATTTTAAGTCAAATAGTTAGTCCTAAATTGTCCCATGTGGCGTTTTAGGTATCTACTTTTTGAGAGATTGGAGT

Coding sequence (CDS)

ATGTGGGGTAATTGTCCAAAACCAAGCGGTGAGAATGAAGTTGGCTTATCTTATGTTAGCAGCTTCACACCCTCTCCAGTGTGGGAGTTCCATGGCCATACCGTTGTTAAGGTTGCTTGTGGAAATGAGCATATTGTGGCTCTAGTTAGTGTTGGGGAAACCTACAATAAAGCTGAAGACTTAGTTTGCTACTCCTGGGGAGATAATTCTCACGGTCAATTAGGCCTGGGAGATAAAGATAGCAGAGCATGCCCCCAAATTATCGAGACATTTAATGAGGCTTCCCCTTGGGCAGTGTACGAAGTAGCATGCGGGGCATTCCATACTGCTTTACTAAGTCACAGTAAGAGACCATGTGACACCTTAGAAAGTGTGTGTTGGACATTTGGTCTGGGGGAAAACGGACAGCTTGGGCATGGCACCACCCAAAATGAATTCCTTCCTCAGCCTGTAAAAGAGTTGCCACAATCTGTATCTCTGATCTCAGTCGCTTGTGGCCTATTTCATACAAGTGTTGTTTCATCAGGTGGAGATCTGTGGTCTTGGGGAATGGAAAGGGGACTTGGCCTTTGTCCAGATGCTAGTTTTACTGGAACCAACACGGGCGATGCTATATCTCCCCTATCCATCTTCTGTAGTGGCACTGAATCACCAAAATTTTTGGATCCTGTTCAAGTTGCTTGTGGGGCTGCTCATACTGTTATAGTTGCACATGATGGATATAAATTGTGGTCGTGGGGACGAGGAAGAAGCGGGGTTCTTGGTAATGGCAAGGCAGTCGACTGTTTTACTCCCACAGTTGTGTTGTGGCCTCCACTTAATGAGGATTTCGATCAAGAGGAAACTGAAACCAAATGCGAGGAAGATAAAGTTGAAGAAAATAAAACCGAGGAAGATAAAGTTGAAGAAAATAAAATCGAGGAAGTAACCGAAGAAAACAAAAAGCTGTTAATGGCTATGGAGGAAATAAAACTTCTTCTAGATAAATTATCTATCATGGAACGGTATGCAAGCTTTCTTCATGGCTCAATATTTGGAAAACCTTTCCAAGAGGGAGATATCCCACTATCATTGCGAAATTCTGGTTCCTTCGACATTGCTAAGGAATGGGAAAGCATGTTGGAGTCATCAGATCGATCAAATCTTTTAAGGTTGGAGACGGTTTATCAAAATATGCTGGCAAGTATTAAAGACAAGATATTGAAGAAAAGGGTCCAGGAGCTTGTGAAGGAGTTTCTTCAATCAGCAACACCCCCAAATTAG

Protein sequence

MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDKVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRNSGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSATPPN*
Homology
[Close]
BLAST of Cucsa.161260.4 vs. Swiss-Prot
Match: UVR8_ARATH (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-21
Identity = 75/252 (29.76%), Postives = 116/252 (46.03%), Query Frame = 1 

Query: 21  SFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKD 80
           S  P  +  F G  +  VA G EH  A+   G+ Y          WG   +G LGLGD+ 
Sbjct: 160 SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYG---------WGWGRYGNLGLGDRT 219

Query: 81  SRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHG 140
            R  P+ + +        +  VACG  HT  +S+S           +T+G  + GQLGHG
Sbjct: 220 DRLVPERVTSTGGEK---MSMVACGWRHTISVSYS--------GALYTYGWSKYGQLGHG 279

Query: 141 TTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMER----GLGLCPDASF 200
             ++  +P  ++ L  S  +  ++ G  HT  ++S G L+ WG  +    G+G       
Sbjct: 280 DLEDHLIPHKLEALSNSF-ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG------- 339

Query: 201 TGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGN 260
              N  D  SP+ +       P     VQV+CG  HT+ V  +   +++WGRG +G LG 
Sbjct: 340 ---NNLDQCSPVQV-----RFPDDQKVVQVSCGWRHTLAVT-ERNNVFAWGRGTNGQLGI 374

Query: 261 GKAVDCFTPTVV 269
           G++VD   P ++
Sbjct: 400 GESVDRNFPKII 374


HSP 2 Score: 101.7 bits (252), Expect = 2.0e-20
Identity = 80/265 (30.19%), Postives = 117/265 (44.15%), Query Frame = 1 

Query: 22  FTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDS 81
           FTP P+   HG  + ++ACG+ H +A+   GE           SWG N +GQLGLGD + 
Sbjct: 109 FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQ---------SWGRNQNGQLGLGDTED 168

Query: 82  RACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGT 141
              PQ I+ F       +  VA GA HTA +        T +   + +G G  G LG G 
Sbjct: 169 SLVPQKIQAFEGI---RIKMVAAGAEHTAAV--------TEDGDLYGWGWGRYGNLGLGD 228

Query: 142 TQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNT 201
             +  +P+ V        +  VACG  HT  VS  G L+++G  +         +     
Sbjct: 229 RTDRLVPERVTS-TGGEKMSMVACGWRHTISVSYSGALYTYGWSK---------YGQLGH 288

Query: 202 GDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVD 261
           GD    L        S  F+   Q++ G  HT+ +  DG KL+ WG  + G +G G  +D
Sbjct: 289 GDLEDHLIPHKLEALSNSFIS--QISGGWRHTMALTSDG-KLYGWGWNKFGQVGVGNNLD 335

Query: 262 CFTPTVVLWPPLNEDFDQEETETKC 287
             +P  V +P      DQ+  +  C
Sbjct: 349 QCSPVQVRFPD-----DQKVVQVSC 335


HSP 3 Score: 101.7 bits (252), Expect = 2.0e-20
Identity = 74/245 (30.20%), Postives = 113/245 (46.12%), Query Frame = 1 

Query: 23  TPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSR 82
           +P+ +    GH +V V CG +H VA    G        +  YSWG    G+LG G+    
Sbjct: 57  SPTQLSALDGHQIVSVTCGADHTVAYSQSG--------MEVYSWGWGDFGRLGHGNSSDL 116

Query: 83  ACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTT 142
             P  I+  +      + ++ACG  H   +        T+E    ++G  +NGQLG G T
Sbjct: 117 FTPLPIKALHGIR---IKQIACGDSHCLAV--------TMEGEVQSWGRNQNGQLGLGDT 176

Query: 143 QNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDL--WSWGMERGLGLCPDASFTGTN 202
           ++  +PQ ++   + + +  VA G  HT+ V+  GDL  W WG    LGL       G  
Sbjct: 177 EDSLVPQKIQAF-EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL-------GDR 236

Query: 203 TGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAV 262
           T D + P  +  +G E         VACG  HT+ V++ G  L+++G  + G LG+G   
Sbjct: 237 T-DRLVPERVTSTGGEKMS-----MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLE 267

Query: 263 DCFTP 266
           D   P
Sbjct: 297 DHLIP 267


HSP 4 Score: 70.1 bits (170), Expect = 6.6e-11
Identity = 54/175 (30.86%), Postives = 78/175 (44.57%), Query Frame = 1 

Query: 94  ASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKE 153
           A P  V  ++ GA H+  L      C        ++G GE+GQLGHG  ++   P  +  
Sbjct: 12  APPRKVLIISAGASHSVALLSGDIVC--------SWGRGEDGQLGHGDAEDRPSPTQLSA 71

Query: 154 LPQSVSLISVACGLFHTSVVSSGG---DLWSWGMERGLGLCPDASFTGTNTGDAISPLSI 213
           L     ++SV CG  HT   S  G     W WG    LG          N+ D  +PL I
Sbjct: 72  L-DGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLG--------HGNSSDLFTPLPI 131

Query: 214 FCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTP 266
                ++   +   Q+ACG +H + V  +G ++ SWGR ++G LG G   D   P
Sbjct: 132 -----KALHGIRIKQIACGDSHCLAVTMEG-EVQSWGRNQNGQLGLGDTEDSLVP 163

[Close]
BLAST of Cucsa.161260.4 vs. Swiss-Prot
Match: HERC5_HUMAN (E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-20
Identity = 108/413 (26.15%), Postives = 172/413 (41.65%), Query Frame = 1 

Query: 10  GENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDN 69
           G+  VG  + S+ TP  V    G  + +++ G  H +AL   G  Y         SWG N
Sbjct: 168 GQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY---------SWGKN 227

Query: 70  SHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTF 129
             GQLGLG  +S+  P +IE  +      V  VACG  H+ALL        T + + +TF
Sbjct: 228 ECGQLGLGHTESKDDPSLIEGLDNQK---VEFVACGGSHSALL--------TQDGLLFTF 287

Query: 130 GLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHT-SVVSSGGDLWSWGMERGL 189
           G G++GQLGH +TQNE  P  V EL     +  +ACG +HT + VS  G ++S+G  +  
Sbjct: 288 GAGKHGQLGHNSTQNELRPCLVAEL-VGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK-- 347

Query: 190 GLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGR 249
               D       T D + PL +  S +E  K    ++        +++A     +  W +
Sbjct: 348 ----DGQLGNGGTRDQLMPLPVKVSSSEELK----LESHTSEKELIMIAGGNQSILLWIK 407

Query: 250 GRSGVLGNGKAVDCFTP-TVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDKVEENKIE 309
             +  +   + +      TV  W    E    + T+ + +E            + + +  
Sbjct: 408 KENSYVNLKRTIPTLNEGTVKRWIADVETKRWQSTKREIQEIFSSPACLTGSFLRKRRTT 467

Query: 310 EVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSI-----FGKPFQEG-DIPLSLRNS 369
           E+      L  A    K L  K  I     + L  ++     F  P QE  +I   L   
Sbjct: 468 EMMPVYLDLNKARNIFKELTQKDWITNMITTCLKDNLLKRLPFHSPPQEALEIFFLLPEC 527

Query: 370 GSFDIAKEWESML--------ESSDRSNLLRLETVYQNMLASIKDKILKKRVQ 407
               I+  WES++        + SD+S+L     V +   A++++    K VQ
Sbjct: 528 PMMHISNNWESLVVPFAKVVCKMSDQSSL-----VLEEYWATLQESTFSKLVQ 544


HSP 2 Score: 84.7 bits (208), Expect = 2.6e-15
Identity = 68/235 (28.94%), Postives = 113/235 (48.09%), Query Frame = 1 

Query: 35  VVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDK-DSRACPQIIETFNE 94
           ++++ CG+ H +AL   GE +         +WG N HGQLG+G K  S   PQI+E    
Sbjct: 140 IIQITCGDYHSLALSKGGELF---------AWGQNLHGQLGVGRKFPSTTTPQIVE---H 199

Query: 95  ASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKE 154
            +   + +++ G  H+  LS S           +++G  E GQLG G T+++  P  ++ 
Sbjct: 200 LAGVPLAQISAGEAHSMALSMSGN--------IYSWGKNECGQLGLGHTESKDDPSLIEG 259

Query: 155 LPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCS 214
           L  +  +  VACG  H+++++  G L+++G  +             +T + + P    C 
Sbjct: 260 L-DNQKVEFVACGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRP----CL 319

Query: 215 GTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTPTVV 269
             E   +    Q+ACG  HT+    D  K++S+G G+ G LGNG   D   P  V
Sbjct: 320 VAELVGY-RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342

[Close]
BLAST of Cucsa.161260.4 vs. Swiss-Prot
Match: HERC1_HUMAN (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-19
Identity = 69/233 (29.61%), Postives = 109/233 (46.78%), Query Frame = 1 

Query: 32  GHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETF 91
           G  VV V+ G  H  A+   GE Y         +WG+   G+LG GD +SR  P +++  
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELY---------TWGEGDFGRLGHGDSNSRNIPTLVKDI 569

Query: 92  NEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPV 151
           +      V EV+CG+ HT  LS   R         W+FG G+NG+LGHG T   + P+ +
Sbjct: 570 SN-----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVI 629

Query: 152 KELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIF 211
           + L Q + +  V  G   +  ++S G +++WG    LG        G++   A+ P  I 
Sbjct: 630 EAL-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-------CGSSEATALRPKLI- 689

Query: 212 CSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFT 265
               E       V V+ G +H + ++HD  ++++WG    G  G G +    T
Sbjct: 690 ----EELAATRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTGPIT 707


HSP 2 Score: 86.3 bits (212), Expect = 8.9e-16
Identity = 69/234 (29.49%), Postives = 115/234 (49.15%), Query Frame = 1 

Query: 34   TVVKVACGNE-HIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFN 93
            T +  +CG++ H +AL   GE +         SWGD  +G+LG G+ D +  P+ IE   
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVF---------SWGDGDYGKLGHGNSDRQRRPRQIEALQ 4141

Query: 94   EASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVK 153
                  V +++CG  H+A++        T +   +TFG G+ G+LG G T N+ LP+ V 
Sbjct: 4142 GEE---VVQMSCGFKHSAVV--------TSDGKLFTFGNGDYGRLGLGNTSNKKLPERVT 4201

Query: 154  ELPQSVSLISVACGLFHTSVVSSGGDL-WSWGMERGLGLCPDASFTGTNTGDAISPLSIF 213
             L +   +  VACGL HT  VS+ G + W++G         D  +     G++       
Sbjct: 4202 AL-EGYQIGQVACGLNHTLAVSADGSMVWAFG---------DGDYGKLGLGNS------- 4261

Query: 214  CSGTESPKFLDPV------QVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKA 260
             +   SP+ +D +      +VACG   +V +  DG+ ++++G+ R   L  G+A
Sbjct: 4262 -TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGH-VYTFGQDRLIGLPEGRA 4276


HSP 3 Score: 85.5 bits (210), Expect = 1.5e-15
Identity = 65/245 (26.53%), Postives = 114/245 (46.53%), Query Frame = 1 

Query: 24   PSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRA 83
            P  +    G  VV+++CG +H   + S G+ +         ++G+  +G+LGLG+  ++ 
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF---------TFGNGDYGRLGLGNTSNKK 4184

Query: 84   CPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQ 143
             P+ +        + + +VACG  HT  +S          S+ W FG G+ G+LG G + 
Sbjct: 4185 LPERVTALEG---YQIGQVACGLNHTLAVSADG-------SMVWAFGDGDYGKLGLGNST 4244

Query: 144  NEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGD 203
             +  PQ +  L   + +  VACG   +  ++  G ++++G +R +GL P+      N   
Sbjct: 4245 AKSSPQKIDVL-CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL-PEGRARNHNRPQ 4304

Query: 204  AISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCF 263
             I  L+           +    VA GA HT+ +A +G  +++WG    G LG G      
Sbjct: 4305 QIPVLA----------GVIIEDVAVGAEHTLALASNG-DVYAWGSNSEGQLGLGHTNHVR 4337

Query: 264  TPTVV 269
             PT+V
Sbjct: 4365 EPTLV 4337


HSP 4 Score: 79.0 bits (193), Expect = 1.4e-13
Identity = 52/202 (25.74%), Postives = 95/202 (47.03%), Query Frame = 1 

Query: 67  GDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVC 126
           G  S+G+LGLGD ++++  + +      S   V        HT           T E   
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF--------TTEGEV 487

Query: 127 WTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMER 186
           +++G G+ G+LGHG +  +  P+ ++   Q   ++ V+ G  H++ V+  G+L++WG E 
Sbjct: 488 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG-EG 547

Query: 187 GLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSW 246
             G          N    +  +S            +  +V+CG++HT+ ++ DG  +WS+
Sbjct: 548 DFGRLGHGDSNSRNIPTLVKDIS------------NVGEVSCGSSHTIALSKDGRTVWSF 607

Query: 247 GRGRSGVLGNGKAVDCFTPTVV 269
           G G +G LG+G     + P V+
Sbjct: 608 GGGDNGKLGHGDTNRVYKPKVI 608


HSP 5 Score: 72.0 bits (175), Expect = 1.7e-11
Identity = 56/205 (27.32%), Postives = 100/205 (48.78%), Query Frame = 1 

Query: 67   GDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEV--ACGAFHTALLSHSKRPCDTLES 126
            G+ S+G+LG G+ D      ++   +    + V ++  +CG+       HS    ++ E 
Sbjct: 4052 GEGSYGRLGQGNSDDL---HVLTVISALQGFVVTQLVTSCGSD-----GHSMALTESGEV 4111

Query: 127  VCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGM 186
              W  G G+ G+LGHG +  +  P+ ++ L Q   ++ ++CG  H++VV+S G L+++G 
Sbjct: 4112 FSW--GDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGN 4171

Query: 187  ----ERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 246
                  GLG     + +     + ++ L  +  G          QVACG  HT+ V+ DG
Sbjct: 4172 GDYGRLGLG-----NTSNKKLPERVTALEGYQIG----------QVACGLNHTLAVSADG 4230

Query: 247  YKLWSWGRGRSGVLGNGKAVDCFTP 266
              +W++G G  G LG G +    +P
Sbjct: 4232 SMVWAFGDGDYGKLGLGNSTAKSSP 4230


HSP 6 Score: 60.1 bits (144), Expect = 6.8e-08
Identity = 44/159 (27.67%), Postives = 77/159 (48.43%), Query Frame = 1 

Query: 30  FHGHTVVKVACGNE----HIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACP 89
           F  H  +K    ++    H +A  + GE +         SWGD  +G+LG G+  ++  P
Sbjct: 451 FEPHRSIKKVSSSKGSDGHTLAFTTEGEVF---------SWGDGDYGKLGHGNSSTQKYP 510

Query: 90  QIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNE 149
           ++I+         V  V+ G  H+A +        T +   +T+G G+ G+LGHG + + 
Sbjct: 511 KLIQ--GPLQGKVVVCVSAGYRHSAAV--------TEDGELYTWGEGDFGRLGHGDSNSR 570

Query: 150 FLPQPVKELPQSVSLISVACGLFHTSVVSSGG-DLWSWG 184
            +P  VK++    ++  V+CG  HT  +S  G  +WS+G
Sbjct: 571 NIPTLVKDIS---NVGEVSCGSSHTIALSKDGRTVWSFG 587


HSP 7 Score: 41.6 bits (96), Expect = 2.5e-02
Identity = 27/87 (31.03%), Postives = 40/87 (45.98%), Query Frame = 1 

Query: 24   PSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRA 83
            P  +    G  +  VA G EH +AL S G+          Y+WG NS GQLGLG  +   
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAEHTLALASNGDV---------YAWGSNSEGQLGLGHTNHVR 4341

Query: 84   CPQIIETFNEASPWAVYEVACGAFHTA 111
             P ++      +   V +++ G  H+A
Sbjct: 4342 EPTLVTGLQGKN---VRQISAGRCHSA 4356

[Close]
BLAST of Cucsa.161260.4 vs. Swiss-Prot
Match: HERC2_HUMAN (E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 3.9e-19
Identity = 73/242 (30.17%), Postives = 117/242 (48.35%), Query Frame = 1 

Query: 21  SFTPSPVWEFHGHTVVKVACGNE--HIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGD 80
           +  P  V       +VK+A  ++  H +AL + GE Y         SWG    G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY---------SWGCGDGGRLGHGD 540

Query: 81  KDSRACPQIIETFN-EASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQL 140
                 P++I  F+ + +   V  +ACG+ ++A +        T E   +T+G G  G+L
Sbjct: 541 TVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------TAEGELYTWGRGNYGRL 600

Query: 141 GHGTTQNEFLPQPVKELPQSVSLISVACGL--FHTSVVSSGGDLWSWGMERGLGLCPDAS 200
           GHG++++E +P  V  L + + +I VACG     T  V+  G +WSWG +   G      
Sbjct: 601 GHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYGKLGRGG 660

Query: 201 FTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLG 258
             G  T   I  L          + LD V+V CG+  ++ +  DG +++SWG+G +  LG
Sbjct: 661 SDGCKTPKLIEKL----------QDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 692


HSP 2 Score: 81.6 bits (200), Expect = 2.2e-14
Identity = 75/267 (28.09%), Postives = 115/267 (43.07%), Query Frame = 1 

Query: 14   VGLSYVSSFTPSP--VWEFHGHTVVKVAC--GNEHIVALVSVGETYNKAEDLVCYSWGDN 73
            +GL   S   P P  +     + V KVA   G  H  AL   G+ +         SWG+ 
Sbjct: 3024 LGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVF---------SWGEG 3083

Query: 74   SHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTF 133
              G+LG   + +   P++IE         + ++ACG+ H+A L+ S           +T+
Sbjct: 3084 DDGKLGHFSRMNCDKPRLIEALKTKR---IRDIACGSSHSAALTSSGE--------LYTW 3143

Query: 134  GLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGL--FHTSVVSSGGDLWSWGMERG 193
            GLGE G+LGHG    +  P+ VK L     +I VACG     T  ++  G ++SWG    
Sbjct: 3144 GLGEYGRLGHGDNTTQLKPKMVKVL-LGHRVIQVACGSRDAQTLALTDEGLVFSWG---- 3203

Query: 194  LGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPV------QVACGAAHTVIVAHDGY 253
                 D  F     G +         G   P+ ++ +      Q+ CGA  ++ +   G 
Sbjct: 3204 -----DGDFGKLGRGGS--------EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3251

Query: 254  KLWSWGRGRSGVLGNGKAVDCFTPTVV 269
             +W+WG+G    LG+G  V    P VV
Sbjct: 3264 -VWTWGKGDYFRLGHGSDVHVRKPQVV 3251


HSP 3 Score: 76.3 bits (186), Expect = 9.2e-13
Identity = 62/231 (26.84%), Postives = 101/231 (43.72%), Query Frame = 1 

Query: 38   VACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPW 97
            +ACG+ H  AL S GE Y         +WG   +G+LG GD  ++  P++++        
Sbjct: 3104 IACGSSHSAALTSSGELY---------TWGLGEYGRLGHGDNTTQLKPKMVKVL---LGH 3163

Query: 98   AVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQS 157
             V +VACG+     L+       T E + +++G G+ G+LG G ++   +PQ ++ L   
Sbjct: 3164 RVIQVACGSRDAQTLAL------TDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NG 3223

Query: 158  VSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTES 217
              +  + CG   +  ++  G +W+WG            F   +  D          G   
Sbjct: 3224 QGVCQIECGAQFSLALTKSGVVWTWG--------KGDYFRLGHGSDVHVRKPQVVEGLRG 3283

Query: 218  PKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTPTVV 269
             K    V VA GA H + V   G ++++WG    G  GNG       PT+V
Sbjct: 3284 KKI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303


HSP 4 Score: 73.9 bits (180), Expect = 4.6e-12
Identity = 55/216 (25.46%), Postives = 99/216 (45.83%), Query Frame = 1 

Query: 32  GHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETF 91
           G  VV +ACG+ +  A+ + GE Y         +WG  ++G+LG G  +  A P ++   
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELY---------TWGRGNYGRLGHGSSEDEAIPMLVAGL 609

Query: 92  NEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPV 151
                  V +VACG+     L+ ++          W++G G+ G+LG G +     P+ +
Sbjct: 610 KGLK---VIDVACGSGDAQTLAVTEN------GQVWSWGDGDYGKLGRGGSDGCKTPKLI 669

Query: 152 KELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIF 211
           ++L Q + ++ V CG   +  ++  G ++SWG         D    G  T + +    + 
Sbjct: 670 EKL-QDLDVVKVRCGSQFSIALTKDGQVYSWGK-------GDNQRLGHGTEEHVRYPKLL 729

Query: 212 CSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWG 248
             G +  K +D   VA G+ H + +  D  ++ SWG
Sbjct: 730 -EGLQGKKVID---VAAGSTHCLALTEDS-EVHSWG 734


HSP 5 Score: 72.8 bits (177), Expect = 1.0e-11
Identity = 57/204 (27.94%), Postives = 97/204 (47.55%), Query Frame = 1 

Query: 64   YSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLE 123
            Y+ G  + G+LG+G  +S + P ++E+        V  V  G  H   LS         E
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCLALSS--------E 4066

Query: 124  SVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWG 183
               +++G  E+G+LGHG       P+ ++ L + + ++ VA G  H++ V++ GDL++WG
Sbjct: 4067 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTWG 4126

Query: 184  MERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGA--AHTVIVAHDGY 243
              R            +++ D + P  +     E+ +    V +ACG+  A T+ +  D  
Sbjct: 4127 KGR------YGRLGHSDSEDQLKPKLV-----EALQGHRVVDIACGSGDAQTLCLTDDD- 4186

Query: 244  KLWSWGRGRSGVLGNGKAVDCFTP 266
             +WSWG G  G LG G +  C  P
Sbjct: 4187 TVWSWGDGDYGKLGRGGSDGCKVP 4188


HSP 6 Score: 70.5 bits (171), Expect = 5.0e-11
Identity = 65/241 (26.97%), Postives = 113/241 (46.89%), Query Frame = 1 

Query: 35   VVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEA 94
            VV+VA G++ + A+   G+ Y         + G+ ++G+LGLG   S     I       
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVY---------ACGEATNGRLGLGI--SSGTVPIPRQITAL 3053

Query: 95   SPWAVYEVAC--GAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVK 154
            S + V +VA   G  H   L        T++   +++G G++G+LGH +  N   P+ ++
Sbjct: 3054 SSYVVKKVAVHSGGRHATAL--------TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3113

Query: 155  ELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFC 214
             L ++  +  +ACG  H++ ++S G+L++WG+           +     GD  + L    
Sbjct: 3114 AL-KTKRIRDIACGSSHSAALTSSGELYTWGL---------GEYGRLGHGDNTTQL---- 3173

Query: 215  SGTESPKFLD------PVQVACGA--AHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFT 266
                 PK +        +QVACG+  A T+ +  +G  ++SWG G  G LG G +  C  
Sbjct: 3174 ----KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRGGSEGCNI 3196


HSP 7 Score: 48.9 bits (115), Expect = 1.6e-04
Identity = 31/93 (33.33%), Postives = 41/93 (44.09%), Query Frame = 1 

Query: 24   PSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRA 83
            P  V    G  V+ +A G+ H V     GE Y         +WGDN  GQLG G  ++  
Sbjct: 4240 PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY---------TWGDNDEGQLGDGTTNAIQ 4299

Query: 84   CPQIIETFNEASPWAVYEVACGAFHTALLSHSK 117
             P+++          V  VACG+ HT   S SK
Sbjct: 4300 RPRLVAALQGKK---VNRVACGSAHTLAWSTSK 4320


HSP 8 Score: 38.5 bits (88), Expect = 2.1e-01
Identity = 40/146 (27.40%), Postives = 63/146 (43.15%), Query Frame = 1 

Query: 129  FGLGEN--GQLGHGTTQNEFLPQPVKELP--QSVSLISVACGLFHTSVVSSGGDLWSWGM 188
            +G G N  GQLG        +P P + L   + V LI     LF    V++ G L++ G 
Sbjct: 3955 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGKLYATGY 4014

Query: 189  ERG--LGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYK 248
              G  LG+    S +     ++I  +           F+  V V  G  H + ++ +G +
Sbjct: 4015 GAGGRLGIGGTESVSTPTLLESIQHV-----------FIKKVAVNSGGKHCLALSSEG-E 4074

Query: 249  LWSWGRGRSGVLGNGKAVDCFTPTVV 269
            ++SWG    G LG+G    C  P V+
Sbjct: 4075 VYSWGEAEDGKLGHGNRSPCDRPRVI 4085

[Close]
BLAST of Cucsa.161260.4 vs. Swiss-Prot
Match: HERC2_MOUSE (E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3)

HSP 1 Score: 96.7 bits (239), Expect = 6.6e-19
Identity = 72/239 (30.13%), Postives = 116/239 (48.54%), Query Frame = 1 

Query: 24  PSPVWEFHGHTVVKVACGNE--HIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDS 83
           P  V       +VK+A  ++  H +AL + GE Y         SWG    G+LG GD   
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY---------SWGCGDGGRLGHGDTVP 544

Query: 84  RACPQIIETFN-EASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHG 143
              P++I  F+ + +   V  +ACG+ ++A +        T E   +T+G G  G+LGHG
Sbjct: 545 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAI--------TAEGELYTWGRGNYGRLGHG 604

Query: 144 TTQNEFLPQPVKELPQSVSLISVACGL--FHTSVVSSGGDLWSWGMERGLGLCPDASFTG 203
           ++++E +P  V  L + + +I VACG     T  V+  G +WSWG +   G        G
Sbjct: 605 SSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYGKLGRGGSDG 664

Query: 204 TNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNG 258
             T   I  L          + LD ++V CG+  ++ +  DG +++SWG+G +  LG+G
Sbjct: 665 CKTPKLIEKL----------QDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLGHG 693


HSP 2 Score: 81.6 bits (200), Expect = 2.2e-14
Identity = 75/267 (28.09%), Postives = 115/267 (43.07%), Query Frame = 1 

Query: 14   VGLSYVSSFTPSP--VWEFHGHTVVKVAC--GNEHIVALVSVGETYNKAEDLVCYSWGDN 73
            +GL   S   P P  +     + V KVA   G  H  AL   G+ +         SWG+ 
Sbjct: 3025 LGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVF---------SWGEG 3084

Query: 74   SHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTF 133
              G+LG   + +   P++IE         + ++ACG+ H+A L+ S           +T+
Sbjct: 3085 DDGKLGHFSRMNCDKPRLIEALKTKR---IRDIACGSSHSAALTSSGE--------LYTW 3144

Query: 134  GLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGL--FHTSVVSSGGDLWSWGMERG 193
            GLGE G+LGHG    +  P+ VK L     +I VACG     T  ++  G ++SWG    
Sbjct: 3145 GLGEYGRLGHGDNTTQLKPKMVKVL-LGHRVIQVACGSRDAQTLALTDEGLVFSWG---- 3204

Query: 194  LGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPV------QVACGAAHTVIVAHDGY 253
                 D  F     G +         G   P+ ++ +      Q+ CGA  ++ +   G 
Sbjct: 3205 -----DGDFGKLGRGGS--------EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3252

Query: 254  KLWSWGRGRSGVLGNGKAVDCFTPTVV 269
             +W+WG+G    LG+G  V    P VV
Sbjct: 3265 -VWTWGKGDYFRLGHGSDVHVRKPQVV 3252


HSP 3 Score: 76.3 bits (186), Expect = 9.2e-13
Identity = 62/231 (26.84%), Postives = 101/231 (43.72%), Query Frame = 1 

Query: 38   VACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPW 97
            +ACG+ H  AL S GE Y         +WG   +G+LG GD  ++  P++++        
Sbjct: 3105 IACGSSHSAALTSSGELY---------TWGLGEYGRLGHGDNTTQLKPKMVKVL---LGH 3164

Query: 98   AVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQS 157
             V +VACG+     L+       T E + +++G G+ G+LG G ++   +PQ ++ L   
Sbjct: 3165 RVIQVACGSRDAQTLAL------TDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NG 3224

Query: 158  VSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTES 217
              +  + CG   +  ++  G +W+WG            F   +  D          G   
Sbjct: 3225 QGVCQIECGAQFSLALTKSGVVWTWG--------KGDYFRLGHGSDVHVRKPQVVEGLRG 3284

Query: 218  PKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTPTVV 269
             K    V VA GA H + V   G ++++WG    G  GNG       PT+V
Sbjct: 3285 KKI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304


HSP 4 Score: 74.3 bits (181), Expect = 3.5e-12
Identity = 56/216 (25.93%), Postives = 99/216 (45.83%), Query Frame = 1 

Query: 32  GHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETF 91
           G  VV +ACG+ +  A+ + GE Y         +WG  ++G+LG G  +  A P ++   
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELY---------TWGRGNYGRLGHGSSEDEAIPMLVAGL 610

Query: 92  NEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPV 151
                  V +VACG+     L+ ++          W++G G+ G+LG G +     P+ +
Sbjct: 611 KGLK---VIDVACGSGDAQTLAVTEN------GQVWSWGDGDYGKLGRGGSDGCKTPKLI 670

Query: 152 KELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIF 211
           ++L Q + +I V CG   +  ++  G ++SWG         D    G  T + +    + 
Sbjct: 671 EKL-QDLDVIKVRCGSQFSIALTKDGQVYSWGK-------GDNQRLGHGTEEHVRYPKLL 730

Query: 212 CSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWG 248
             G +  K +D   VA G+ H + +  D  ++ SWG
Sbjct: 731 -EGLQGKKVID---VAAGSTHCLALTEDS-EVHSWG 735


HSP 5 Score: 72.4 bits (176), Expect = 1.3e-11
Identity = 56/204 (27.45%), Postives = 97/204 (47.55%), Query Frame = 1 

Query: 64   YSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLE 123
            Y+ G  + G+LG+G  +S + P ++E+        V  V  G  H   LS         E
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCLALSS--------E 4068

Query: 124  SVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWG 183
               +++G  E+G+LGHG       P+ ++ L + + ++ VA G  H++ V++ GDL++WG
Sbjct: 4069 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTWG 4128

Query: 184  MERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGA--AHTVIVAHDGY 243
              R            +++ D + P  +     E+ +    + +ACG+  A T+ +  D  
Sbjct: 4129 KGR------YGRLGHSDSEDQLKPKLV-----EALQGHRVIDIACGSGDAQTLCLTDDD- 4188

Query: 244  KLWSWGRGRSGVLGNGKAVDCFTP 266
             +WSWG G  G LG G +  C  P
Sbjct: 4189 TVWSWGDGDYGKLGRGGSDGCKVP 4190


HSP 6 Score: 71.6 bits (174), Expect = 2.3e-11
Identity = 66/241 (27.39%), Postives = 113/241 (46.89%), Query Frame = 1 

Query: 35   VVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEA 94
            VV+VA G++ + A+   G+ Y         S G+ ++G+LGLG   S     I       
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVY---------SCGEATNGRLGLGM--SSGTVPIPRQITAL 3054

Query: 95   SPWAVYEVAC--GAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVK 154
            S + V +VA   G  H   L        T++   +++G G++G+LGH +  N   P+ ++
Sbjct: 3055 SSYVVKKVAVHSGGRHATAL--------TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3114

Query: 155  ELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFC 214
             L ++  +  +ACG  H++ ++S G+L++WG+           +     GD  + L    
Sbjct: 3115 AL-KTKRIRDIACGSSHSAALTSSGELYTWGL---------GEYGRLGHGDNTTQL---- 3174

Query: 215  SGTESPKFLD------PVQVACGA--AHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFT 266
                 PK +        +QVACG+  A T+ +  +G  ++SWG G  G LG G +  C  
Sbjct: 3175 ----KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRGGSEGCNI 3197


HSP 7 Score: 48.9 bits (115), Expect = 1.6e-04
Identity = 31/93 (33.33%), Postives = 41/93 (44.09%), Query Frame = 1 

Query: 24   PSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRA 83
            P  V    G  V+ +A G+ H V     GE Y         +WGDN  GQLG G  ++  
Sbjct: 4242 PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY---------TWGDNDEGQLGDGTTNAIQ 4301

Query: 84   CPQIIETFNEASPWAVYEVACGAFHTALLSHSK 117
             P+++          V  VACG+ HT   S SK
Sbjct: 4302 RPRLVAALQGKK---VNRVACGSAHTLAWSTSK 4322


HSP 8 Score: 38.5 bits (88), Expect = 2.1e-01
Identity = 40/146 (27.40%), Postives = 63/146 (43.15%), Query Frame = 1 

Query: 129  FGLGEN--GQLGHGTTQNEFLPQPVKELP--QSVSLISVACGLFHTSVVSSGGDLWSWGM 188
            +G G N  GQLG        +P P + L   + V LI     LF    V++ G L++ G 
Sbjct: 3957 YGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF---AVTADGKLYATGY 4016

Query: 189  ERG--LGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYK 248
              G  LG+    S +     ++I  +           F+  V V  G  H + ++ +G +
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHV-----------FIKKVAVNSGGKHCLALSSEG-E 4076

Query: 249  LWSWGRGRSGVLGNGKAVDCFTPTVV 269
            ++SWG    G LG+G    C  P V+
Sbjct: 4077 VYSWGEAEDGKLGHGNRSPCDRPRVI 4087

[Close]
BLAST of Cucsa.161260.4 vs. TrEMBL
Match: A0A0A0LPS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373550 PE=4 SV=1)

HSP 1 Score: 871.3 bits (2250), Expect = 4.7e-250
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 60
           MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED
Sbjct: 162 MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 221

Query: 61  LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 120
           LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD
Sbjct: 222 LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 281

Query: 121 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 180
           TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW
Sbjct: 282 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 341

Query: 181 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 240
           SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG
Sbjct: 342 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 401

Query: 241 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDK 300
           YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDK
Sbjct: 402 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDK 461

Query: 301 VEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN 360
           VEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN
Sbjct: 462 VEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN 521

Query: 361 SGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSATPPN 420
           SGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSATPPN
Sbjct: 522 SGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSATPPN 581

[Close]
BLAST of Cucsa.161260.4 vs. TrEMBL
Match: A0A061GIS5_THECC (Regulator of chromosome condensation family protein isoform 3 OS=Theobroma cacao GN=TCM_037200 PE=4 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 2.4e-177
Identity = 293/418 (70.10%), Postives = 351/418 (83.97%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 60
           MWG CP+ +  ++ GL++VSSF+P PVW+FHGHTVVKVACGNEH+VALVS GETY K +D
Sbjct: 75  MWGLCPQENSSSDGGLTFVSSFSPIPVWDFHGHTVVKVACGNEHVVALVSAGETY-KGDD 134

Query: 61  LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 120
           LVCYSWG N HGQLGLGD++SR  P+I+ETFN+  PW VYEVACGAFHTALL+H KRP +
Sbjct: 135 LVCYSWGGNGHGQLGLGDRESRVHPEIVETFNQDIPWTVYEVACGAFHTALLTHRKRPSE 194

Query: 121 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 180
           TLES+CWTFGLG+ GQLGHGTTQ+  +P+PVKELPQ V L+SV CGLFHTSVVSS GD+W
Sbjct: 195 TLESMCWTFGLGDKGQLGHGTTQSTLVPEPVKELPQPVYLVSVDCGLFHTSVVSSAGDVW 254

Query: 181 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 240
           SWGME+GLGLCPDASFTGT+ GDA+SPL I   G   PKF DPVQ++CGAAHTV+VAHDG
Sbjct: 255 SWGMEKGLGLCPDASFTGTDAGDALSPLQISGDGLHEPKFRDPVQISCGAAHTVVVAHDG 314

Query: 241 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEE-TETKCEEDKVEENKTEED 300
           YKLWSWGRGRSGVLGNGK +DCFTP++VLWPPLNEDF QEE   T  E DK+ ++K    
Sbjct: 315 YKLWSWGRGRSGVLGNGKTIDCFTPSMVLWPPLNEDFQQEELNSTVGEGDKIVDHKNS-- 374

Query: 301 KVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLR 360
                  +  +E +KKL +AMEE+KLL  KLSIMERYAS LHGSIFGKPF+E DIP+SL+
Sbjct: 375 -------DAGSEMDKKLSLAMEEMKLLQSKLSIMERYASVLHGSIFGKPFEEQDIPISLQ 434

Query: 361 NSGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSAT 418
           NSG+FD+A+EWE+MLESSDRS L+RLE  Y+NMLA +KDK++KKR+QE++KE+L S+T
Sbjct: 435 NSGTFDVAREWENMLESSDRSKLVRLELFYRNMLAGVKDKMMKKRIQEIIKEYLPSST 482

[Close]
BLAST of Cucsa.161260.4 vs. TrEMBL
Match: A0A061GK39_THECC (Regulator of chromosome condensation family protein isoform 2 OS=Theobroma cacao GN=TCM_037200 PE=4 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 2.4e-177
Identity = 293/418 (70.10%), Postives = 351/418 (83.97%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 60
           MWG CP+ +  ++ GL++VSSF+P PVW+FHGHTVVKVACGNEH+VALVS GETY K +D
Sbjct: 161 MWGLCPQENSSSDGGLTFVSSFSPIPVWDFHGHTVVKVACGNEHVVALVSAGETY-KGDD 220

Query: 61  LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 120
           LVCYSWG N HGQLGLGD++SR  P+I+ETFN+  PW VYEVACGAFHTALL+H KRP +
Sbjct: 221 LVCYSWGGNGHGQLGLGDRESRVHPEIVETFNQDIPWTVYEVACGAFHTALLTHRKRPSE 280

Query: 121 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 180
           TLES+CWTFGLG+ GQLGHGTTQ+  +P+PVKELPQ V L+SV CGLFHTSVVSS GD+W
Sbjct: 281 TLESMCWTFGLGDKGQLGHGTTQSTLVPEPVKELPQPVYLVSVDCGLFHTSVVSSAGDVW 340

Query: 181 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 240
           SWGME+GLGLCPDASFTGT+ GDA+SPL I   G   PKF DPVQ++CGAAHTV+VAHDG
Sbjct: 341 SWGMEKGLGLCPDASFTGTDAGDALSPLQISGDGLHEPKFRDPVQISCGAAHTVVVAHDG 400

Query: 241 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEE-TETKCEEDKVEENKTEED 300
           YKLWSWGRGRSGVLGNGK +DCFTP++VLWPPLNEDF QEE   T  E DK+ ++K    
Sbjct: 401 YKLWSWGRGRSGVLGNGKTIDCFTPSMVLWPPLNEDFQQEELNSTVGEGDKIVDHKNS-- 460

Query: 301 KVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLR 360
                  +  +E +KKL +AMEE+KLL  KLSIMERYAS LHGSIFGKPF+E DIP+SL+
Sbjct: 461 -------DAGSEMDKKLSLAMEEMKLLQSKLSIMERYASVLHGSIFGKPFEEQDIPISLQ 520

Query: 361 NSGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSAT 418
           NSG+FD+A+EWE+MLESSDRS L+RLE  Y+NMLA +KDK++KKR+QE++KE+L S+T
Sbjct: 521 NSGTFDVAREWENMLESSDRSKLVRLELFYRNMLAGVKDKMMKKRIQEIIKEYLPSST 568

[Close]
BLAST of Cucsa.161260.4 vs. TrEMBL
Match: A0A061GKT1_THECC (Regulator of chromosome condensation family protein isoform 1 OS=Theobroma cacao GN=TCM_037200 PE=4 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 2.4e-177
Identity = 293/418 (70.10%), Postives = 351/418 (83.97%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 60
           MWG CP+ +  ++ GL++VSSF+P PVW+FHGHTVVKVACGNEH+VALVS GETY K +D
Sbjct: 173 MWGLCPQENSSSDGGLTFVSSFSPIPVWDFHGHTVVKVACGNEHVVALVSAGETY-KGDD 232

Query: 61  LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 120
           LVCYSWG N HGQLGLGD++SR  P+I+ETFN+  PW VYEVACGAFHTALL+H KRP +
Sbjct: 233 LVCYSWGGNGHGQLGLGDRESRVHPEIVETFNQDIPWTVYEVACGAFHTALLTHRKRPSE 292

Query: 121 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 180
           TLES+CWTFGLG+ GQLGHGTTQ+  +P+PVKELPQ V L+SV CGLFHTSVVSS GD+W
Sbjct: 293 TLESMCWTFGLGDKGQLGHGTTQSTLVPEPVKELPQPVYLVSVDCGLFHTSVVSSAGDVW 352

Query: 181 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 240
           SWGME+GLGLCPDASFTGT+ GDA+SPL I   G   PKF DPVQ++CGAAHTV+VAHDG
Sbjct: 353 SWGMEKGLGLCPDASFTGTDAGDALSPLQISGDGLHEPKFRDPVQISCGAAHTVVVAHDG 412

Query: 241 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEE-TETKCEEDKVEENKTEED 300
           YKLWSWGRGRSGVLGNGK +DCFTP++VLWPPLNEDF QEE   T  E DK+ ++K    
Sbjct: 413 YKLWSWGRGRSGVLGNGKTIDCFTPSMVLWPPLNEDFQQEELNSTVGEGDKIVDHKNS-- 472

Query: 301 KVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLR 360
                  +  +E +KKL +AMEE+KLL  KLSIMERYAS LHGSIFGKPF+E DIP+SL+
Sbjct: 473 -------DAGSEMDKKLSLAMEEMKLLQSKLSIMERYASVLHGSIFGKPFEEQDIPISLQ 532

Query: 361 NSGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSAT 418
           NSG+FD+A+EWE+MLESSDRS L+RLE  Y+NMLA +KDK++KKR+QE++KE+L S+T
Sbjct: 533 NSGTFDVAREWENMLESSDRSKLVRLELFYRNMLAGVKDKMMKKRIQEIIKEYLPSST 580

[Close]
BLAST of Cucsa.161260.4 vs. TrEMBL
Match: A0A0D2QJR9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G026900 PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 1.6e-168
Identity = 287/416 (68.99%), Postives = 340/416 (81.73%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 60
           MWGN P+ +   +  L++VS FTP+PVW+FHGHTVVKVACGNEH+VALVS GE + K +D
Sbjct: 48  MWGNYPQENNNGDGSLTFVSCFTPTPVWDFHGHTVVKVACGNEHVVALVSAGERH-KGDD 107

Query: 61  LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 120
           L+CYSWG N HGQLGLGD +SRA P+I+ TF++   W VYEVACGAFHTALL+  KRP D
Sbjct: 108 LLCYSWGGNGHGQLGLGDTESRARPEIVGTFSQDIQWTVYEVACGAFHTALLTRKKRPSD 167

Query: 121 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 180
           TLES+CWTFGLG+ GQLGHGTT++  +P+PVKELPQ V L+SV CGLFHTSVVSS GD+W
Sbjct: 168 TLESMCWTFGLGDRGQLGHGTTRSALVPEPVKELPQPVYLVSVDCGLFHTSVVSSAGDVW 227

Query: 181 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 240
           SWGME+GLGLCPDASFTGT++GDAISPL I       PKF DPVQV+CGAAHTV+VAHDG
Sbjct: 228 SWGMEKGLGLCPDASFTGTDSGDAISPLRI-----HGPKFNDPVQVSCGAAHTVLVAHDG 287

Query: 241 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDK 300
           YKLWSWGRGRSGVLGNGK VDCF+PT+VLWPPLNEDF QEE     ++DK+         
Sbjct: 288 YKLWSWGRGRSGVLGNGKTVDCFSPTIVLWPPLNEDFKQEELN---QDDKI--------- 347

Query: 301 VEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN 360
           V++   + V+E  KKL +AMEE+KLL  KLS MERYAS LHGSIFGKPF+  DIP+SL+N
Sbjct: 348 VDQKGSDGVSEMEKKLSLAMEEMKLLQSKLSTMERYASILHGSIFGKPFEVQDIPISLQN 407

Query: 361 SGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSA 417
           SG+FDIA+EWE+MLESSDRS L+RLE  Y+NML  +KDKILKKR+QEL+KE L S+
Sbjct: 408 SGTFDIAREWENMLESSDRSGLVRLELFYRNMLTGVKDKILKKRIQELIKECLPSS 445

[Close]
BLAST of Cucsa.161260.4 vs. TAIR10
Match: AT5G11580.1 (AT5G11580.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 439.5 bits (1129), Expect = 2.3e-123
Identity = 226/421 (53.68%), Postives = 285/421 (67.70%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETY--NKA 60
           MWGN P    E +  LS+ S   P P+ +FHG TV+KVACG+EH+VALV  G+ +  N  
Sbjct: 165 MWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSY 224

Query: 61  EDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRP 120
           +  V YSWG+N HGQLGLGD +SRA PQ +ETFN+ S   VY++ACGA HTALL++ K  
Sbjct: 225 DVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKET 284

Query: 121 CDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGD 180
                S+CWTFG GENGQLGH + ++  LP+PV +LP+   L+SV CGLFHTSVVSS G 
Sbjct: 285 PKG-PSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGY 344

Query: 181 LWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAH 240
           +WSWGMERGLGLCPD +FT    GD   P  I  SG  S +F DPVQV+CGAAHTV+V  
Sbjct: 345 VWSWGMERGLGLCPDVNFTEVEAGDDSVPRKI--SGGSS-RFRDPVQVSCGAAHTVLVVD 404

Query: 241 DGYKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEE 300
            GYKLWSWGRGR+GVLG G   DC+ PT+V WP                      N+ + 
Sbjct: 405 GGYKLWSWGRGRNGVLGTGNVSDCYVPTLVFWP----------------------NELKP 464

Query: 301 DKVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPF-QEGDIPLS 360
           +K      EEV ++ K    + EEIK L  KL +MERYAS LHGSIFGKPF +E DIP S
Sbjct: 465 EK------EEVPDDGKS--ASTEEIKRLESKLMVMERYASILHGSIFGKPFNEEEDIPYS 524

Query: 361 LRNSGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSAT 419
           LR SG FD+ KEW  MLES+D+S L+RL+  Y++M+  +KDK+L++R+QE++K+ LQS+ 
Sbjct: 525 LRVSGYFDMGKEWGEMLESADKSQLMRLQAFYEDMIGRVKDKVLQRRIQEIMKDCLQSSA 551

[Close]
BLAST of Cucsa.161260.4 vs. TAIR10
Match: AT5G12350.1 (AT5G12350.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 112.5 bits (280), Expect = 6.5e-25
Identity = 84/274 (30.66%), Postives = 126/274 (45.99%), Query Frame = 1 

Query: 10  GENEVGLSY---VSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSW 69
           G   VG S+   + S  P  +       V  +ACG +H V +   GE++         SW
Sbjct: 282 GNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESF---------SW 341

Query: 70  GDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVC 129
           G+ S G+LG G   +   P++I+  N  +   +  VACG FH+  +        TL    
Sbjct: 342 GEESEGRLGHGVDSNIQQPKLIDALNTTN---IELVACGEFHSCAV--------TLSGDL 401

Query: 130 WTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMER 189
           +T+G G+ G LGHG   + ++P+ V  L + + + S+ACG +HT+VV+S G L+++G   
Sbjct: 402 YTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFG--- 461

Query: 190 GLGLCPDASFTGTNTGDAISPLSIFC-SGTESPKFLDPVQVACGAAHTVIVAH------- 249
                 D +F     GD     S+F     +S K L  V+ ACG  HT  V         
Sbjct: 462 ------DGTFGVLGHGD---KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 521

Query: 250 ----DGYKLWSWGRGRSGVLGNGKAVDCFTPTVV 269
                  KL++WG G  G LG+G       PT V
Sbjct: 522 SSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCV 523


HSP 2 Score: 88.6 bits (218), Expect = 1.0e-17
Identity = 71/257 (27.63%), Postives = 119/257 (46.30%), Query Frame = 1 

Query: 19  VSSFTPSPV-WEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLG 78
           VS + P  V +   G  V  +ACG  H   + S G+ +         ++GD + G LG G
Sbjct: 398 VSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLF---------TFGDGTFGVLGHG 457

Query: 79  DKDSRACPQIIETFNEASPWAVYEVACGAFHTALL------SHSKRPCDTLESVCWTFGL 138
           DK S   P+ +++            ACG +HTA +      S S   C + +   W  G 
Sbjct: 458 DKKSVFIPREVDSLKGLR---TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW--GD 517

Query: 139 GENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLC 198
           G+ G+LGHG  + + +P  V  L +  +   VACG   T  +++ G +++ G        
Sbjct: 518 GDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLTVALTTSGHVYTMGS------- 577

Query: 199 PDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRS 258
           P     G +  D  +P  +   G     F++  ++ACGA H  ++     ++++WG+G +
Sbjct: 578 PVYGQLGNSHADGKTPNRV--EGKLHKSFVE--EIACGAYHVAVLT-SRTEVYTWGKGSN 627

Query: 259 GVLGNGKAVDCFTPTVV 269
           G LG+G   D  +PT+V
Sbjct: 638 GRLGHGDVDDRNSPTLV 627


HSP 3 Score: 54.7 bits (130), Expect = 1.6e-07
Identity = 35/115 (30.43%), Postives = 55/115 (47.83%), Query Frame = 1 

Query: 13  EVGLSYVSSFTPSPV-WEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSH 72
           ++G S+    TP+ V  + H   V ++ACG  H+  L S  E Y         +WG  S+
Sbjct: 560 QLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVY---------TWGKGSN 619

Query: 73  GQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVC 127
           G+LG GD D R  P ++E+  +     V  +ACG   TA +   +      +S+C
Sbjct: 620 GRLGHGDVDDRNSPTLVESLKDKQ---VKSIACGTNFTAAVCIHRWASGMDQSMC 662


HSP 4 Score: 41.6 bits (96), Expect = 1.4e-03
Identity = 33/103 (32.04%), Postives = 46/103 (44.66%), Query Frame = 1 

Query: 158 VSLISVACGLFHTSVVSSG---GDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSG 217
           VS+ S      H S    G   GD++ WG   G G+    +    ++ D I   S+    
Sbjct: 243 VSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFD-IKMDSLLPKA 302

Query: 218 TESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNG 258
            ES   LD   +ACG  H V+V   G + +SWG    G LG+G
Sbjct: 303 LESTIVLDVQNIACGGQHAVLVTKQG-ESFSWGEESEGRLGHG 343

[Close]
BLAST of Cucsa.161260.4 vs. TAIR10
Match: AT5G19420.2 (AT5G19420.2 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-23
Identity = 76/246 (30.89%), Postives = 116/246 (47.15%), Query Frame = 1 

Query: 35  VVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEA 94
           V  +ACG +H V +   GE++         SWG+ S G+LG G   +   P++I+  N  
Sbjct: 348 VQNIACGGQHAVLVTKQGESF---------SWGEESEGRLGHGVDSNVQHPKLIDALNTT 407

Query: 95  SPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKEL 154
           +   +  VACG +H+  +        TL    +T+G G+ G LGHG   + ++P+ V  L
Sbjct: 408 N---IELVACGEYHSCAV--------TLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFL 467

Query: 155 PQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFC-S 214
            + + + S+ACG +HT+VV+S G L+++G         D +F     GD     S+F   
Sbjct: 468 MEGIHVSSIACGPYHTAVVTSAGQLFTFG---------DGTFGVLGHGDR---KSVFIPR 527

Query: 215 GTESPKFLDPVQVACGAAHTVIVAH-----------DGYKLWSWGRGRSGVLGNGKAVDC 269
             +S K L  V+ ACG  HT  V                KL++WG G    LG+G     
Sbjct: 528 EVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPK 561


HSP 2 Score: 84.7 bits (208), Expect = 1.5e-16
Identity = 70/257 (27.24%), Postives = 117/257 (45.53%), Query Frame = 1 

Query: 19  VSSFTPSPV-WEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLG 78
           VS + P  V +   G  V  +ACG  H   + S G+ +         ++GD + G LG G
Sbjct: 436 VSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLF---------TFGDGTFGVLGHG 495

Query: 79  DKDSRACPQIIETFNEASPWAVYEVACGAFHTALL------SHSKRPCDTLESVCWTFGL 138
           D+ S   P+ +++            ACG +HTA +      S S   C + +   W  G 
Sbjct: 496 DRKSVFIPREVDSLKGLR---TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW--GD 555

Query: 139 GENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLC 198
           G+  +LGHG  + + +P  V  L +  +   VACG   T  +++ G +++ G        
Sbjct: 556 GDKSRLGHGDKEPKLVPTCVAALVEP-NFCQVACGHSLTVALTTSGHVYTMGS------- 615

Query: 199 PDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRS 258
           P     G    D   P  +   G     F++  ++ACGA H  ++     ++++WG+G +
Sbjct: 616 PVYGQLGNPHADGKVPTRV--DGKLHKSFVE--EIACGAYHVAVLT-SRTEVYTWGKGSN 665

Query: 259 GVLGNGKAVDCFTPTVV 269
           G LG+G A D  +PT+V
Sbjct: 676 GRLGHGDADDRNSPTLV 665


HSP 3 Score: 62.4 bits (150), Expect = 7.7e-10
Identity = 46/152 (30.26%), Postives = 74/152 (48.68%), Query Frame = 1 

Query: 37  KVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASP 96
           +VACG+   VAL + G  Y         + G   +GQLG    D +   ++    +++  
Sbjct: 571 QVACGHSLTVALTTSGHVY---------TMGSPVYGQLGNPHADGKVPTRVDGKLHKSF- 630

Query: 97  WAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQ 156
             V E+ACGA+H A+L        T  +  +T+G G NG+LGHG   +   P  V+ L +
Sbjct: 631 --VEEIACGAYHVAVL--------TSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESL-K 690

Query: 157 SVSLISVACGLFHTSVVSSGGDLWSWGMERGL 189
              + S+ACG   T+ V      W+ GM++ +
Sbjct: 691 DKQVKSIACGSNFTAAVCL--HKWASGMDQSM 699


HSP 4 Score: 52.4 bits (124), Expect = 8.0e-07
Identity = 47/162 (29.01%), Postives = 72/162 (44.44%), Query Frame = 1 

Query: 120 DTLESV-CWTFGLGENGQLGHGTTQ---------NEFLPQPVKELPQSVSLISVACGLFH 179
           DTL  V  W  G+GE G LG G  +         +  LP+ + E    + + ++ACG  H
Sbjct: 300 DTLGDVFMWGEGIGE-GVLGGGNHRVGSSLEIKMDSLLPKAL-ESTIVLDVQNIACGGQH 359

Query: 180 TSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQ---- 239
             +V+  G+ +SWG E           +    G  +       S  + PK +D +     
Sbjct: 360 AVLVTKQGESFSWGEE-----------SEGRLGHGVD------SNVQHPKLIDALNTTNI 419

Query: 240 --VACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTP 266
             VACG  H+  V   G  L++WG+G  G+LG+G  V  + P
Sbjct: 420 ELVACGEYHSCAVTLSG-DLYTWGKGDFGILGHGNEVSHWVP 441


HSP 5 Score: 41.6 bits (96), Expect = 1.4e-03
Identity = 33/103 (32.04%), Postives = 44/103 (42.72%), Query Frame = 1 

Query: 158 VSLISVACGLFHTSVVSSG---GDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSG 217
           VSL S      H S    G   GD++ WG   G G+    +     +   I   S+    
Sbjct: 281 VSLSSAISSSSHGSGHDDGDTLGDVFMWGEGIGEGVLGGGNHR-VGSSLEIKMDSLLPKA 340

Query: 218 TESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNG 258
            ES   LD   +ACG  H V+V   G + +SWG    G LG+G
Sbjct: 341 LESTIVLDVQNIACGGQHAVLVTKQG-ESFSWGEESEGRLGHG 381

[Close]
BLAST of Cucsa.161260.4 vs. TAIR10
Match: AT5G63860.1 (AT5G63860.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 105.9 bits (263), Expect = 6.1e-23
Identity = 75/252 (29.76%), Postives = 116/252 (46.03%), Query Frame = 1 

Query: 21  SFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKD 80
           S  P  +  F G  +  VA G EH  A+   G+ Y          WG   +G LGLGD+ 
Sbjct: 160 SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYG---------WGWGRYGNLGLGDRT 219

Query: 81  SRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHG 140
            R  P+ + +        +  VACG  HT  +S+S           +T+G  + GQLGHG
Sbjct: 220 DRLVPERVTSTGGEK---MSMVACGWRHTISVSYS--------GALYTYGWSKYGQLGHG 279

Query: 141 TTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMER----GLGLCPDASF 200
             ++  +P  ++ L  S  +  ++ G  HT  ++S G L+ WG  +    G+G       
Sbjct: 280 DLEDHLIPHKLEALSNSF-ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG------- 339

Query: 201 TGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGN 260
              N  D  SP+ +       P     VQV+CG  HT+ V  +   +++WGRG +G LG 
Sbjct: 340 ---NNLDQCSPVQV-----RFPDDQKVVQVSCGWRHTLAVT-ERNNVFAWGRGTNGQLGI 374

Query: 261 GKAVDCFTPTVV 269
           G++VD   P ++
Sbjct: 400 GESVDRNFPKII 374


HSP 2 Score: 101.7 bits (252), Expect = 1.2e-21
Identity = 80/265 (30.19%), Postives = 117/265 (44.15%), Query Frame = 1 

Query: 22  FTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDS 81
           FTP P+   HG  + ++ACG+ H +A+   GE           SWG N +GQLGLGD + 
Sbjct: 109 FTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQ---------SWGRNQNGQLGLGDTED 168

Query: 82  RACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGT 141
              PQ I+ F       +  VA GA HTA +        T +   + +G G  G LG G 
Sbjct: 169 SLVPQKIQAFEGI---RIKMVAAGAEHTAAV--------TEDGDLYGWGWGRYGNLGLGD 228

Query: 142 TQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNT 201
             +  +P+ V        +  VACG  HT  VS  G L+++G  +         +     
Sbjct: 229 RTDRLVPERVTS-TGGEKMSMVACGWRHTISVSYSGALYTYGWSK---------YGQLGH 288

Query: 202 GDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVD 261
           GD    L        S  F+   Q++ G  HT+ +  DG KL+ WG  + G +G G  +D
Sbjct: 289 GDLEDHLIPHKLEALSNSFIS--QISGGWRHTMALTSDG-KLYGWGWNKFGQVGVGNNLD 335

Query: 262 CFTPTVVLWPPLNEDFDQEETETKC 287
             +P  V +P      DQ+  +  C
Sbjct: 349 QCSPVQVRFPD-----DQKVVQVSC 335


HSP 3 Score: 101.7 bits (252), Expect = 1.2e-21
Identity = 74/245 (30.20%), Postives = 113/245 (46.12%), Query Frame = 1 

Query: 23  TPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSR 82
           +P+ +    GH +V V CG +H VA    G        +  YSWG    G+LG G+    
Sbjct: 57  SPTQLSALDGHQIVSVTCGADHTVAYSQSG--------MEVYSWGWGDFGRLGHGNSSDL 116

Query: 83  ACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTT 142
             P  I+  +      + ++ACG  H   +        T+E    ++G  +NGQLG G T
Sbjct: 117 FTPLPIKALHGIR---IKQIACGDSHCLAV--------TMEGEVQSWGRNQNGQLGLGDT 176

Query: 143 QNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDL--WSWGMERGLGLCPDASFTGTN 202
           ++  +PQ ++   + + +  VA G  HT+ V+  GDL  W WG    LGL       G  
Sbjct: 177 EDSLVPQKIQAF-EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL-------GDR 236

Query: 203 TGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAV 262
           T D + P  +  +G E         VACG  HT+ V++ G  L+++G  + G LG+G   
Sbjct: 237 T-DRLVPERVTSTGGEKMS-----MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLE 267

Query: 263 DCFTP 266
           D   P
Sbjct: 297 DHLIP 267


HSP 4 Score: 70.1 bits (170), Expect = 3.7e-12
Identity = 54/175 (30.86%), Postives = 78/175 (44.57%), Query Frame = 1 

Query: 94  ASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKE 153
           A P  V  ++ GA H+  L      C        ++G GE+GQLGHG  ++   P  +  
Sbjct: 12  APPRKVLIISAGASHSVALLSGDIVC--------SWGRGEDGQLGHGDAEDRPSPTQLSA 71

Query: 154 LPQSVSLISVACGLFHTSVVSSGG---DLWSWGMERGLGLCPDASFTGTNTGDAISPLSI 213
           L     ++SV CG  HT   S  G     W WG    LG          N+ D  +PL I
Sbjct: 72  L-DGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLG--------HGNSSDLFTPLPI 131

Query: 214 FCSGTESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTP 266
                ++   +   Q+ACG +H + V  +G ++ SWGR ++G LG G   D   P
Sbjct: 132 -----KALHGIRIKQIACGDSHCLAVTMEG-EVQSWGRNQNGQLGLGDTEDSLVP 163

[Close]
BLAST of Cucsa.161260.4 vs. TAIR10
Match: AT5G08710.1 (AT5G08710.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 95.5 bits (236), Expect = 8.3e-20
Identity = 84/289 (29.07%), Postives = 123/289 (42.56%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSF-TPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAE 60
           MWG     SG+  +G         P+ V   HG T+  VA G+EH VA+   GE      
Sbjct: 157 MWGK--NSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVL---- 216

Query: 61  DLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYE--------VACGAFHTAL 120
                SWG    G+LG G + S     I+ + +E +P  + E        VA G  H+A 
Sbjct: 217 -----SWGGGGSGRLGHGHQSSLF--GILRSNSEFTPRLIKELEGIKVTNVAAGLLHSA- 276

Query: 121 LSHSKRPCDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTS 180
                  C       + FG     ++G G  +N   P  + E+P +     VACG +HT 
Sbjct: 277 -------CTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEE---VACGGYHTC 336

Query: 181 VVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPV--QVACG 240
           VV+ GG+L++WG      L  D+++       + SP+ +     E P FL+    QV+CG
Sbjct: 337 VVTRGGELYTWGSNENGCLGTDSTYV------SHSPVRV-----EGP-FLESTVSQVSCG 396

Query: 241 AAHTVIVAHDGYKLWSW----------GRGRSGVLGNGKAVDCFTPTVV 269
             HT  ++ +    W W          G    G LG+G  VD   P +V
Sbjct: 397 WKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMV 409


HSP 2 Score: 84.0 bits (206), Expect = 2.5e-16
Identity = 77/280 (27.50%), Postives = 120/280 (42.86%), Query Frame = 1 

Query: 13  EVGLSYVSSFTPSPVWEFHG--HTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNS 72
           ++G+S V S    P+ E  G    ++ ++ G  H  A+   GE Y          WG NS
Sbjct: 113 QLGVSDVKSHAMDPL-EVSGLDKDILHISAGYYHSAAITVDGELY---------MWGKNS 172

Query: 73  HGQLGLGDKDSRA--CPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESVCWT 132
            GQLGLG K +R    P  +E  +  +   +  VA G+ H+  ++      D  E + W 
Sbjct: 173 SGQLGLGKKAARVVRVPTKVEALHGIT---IQSVALGSEHSVAVT------DGGEVLSW- 232

Query: 133 FGLGENGQLGHG---------TTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDL 192
            G G +G+LGHG          + +EF P+ +KEL + + + +VA GL H++     G  
Sbjct: 233 -GGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKEL-EGIKVTNVAAGLLHSACTDENGSA 292

Query: 193 WSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHD 252
           + +G E+ +            T   IS +                +VACG  HT +V   
Sbjct: 293 FMFG-EKSINKMGFGGVRNATTPSIISEVPY------------AEEVACGGYHTCVVTRG 352

Query: 253 GYKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQ 280
           G +L++WG   +G LG        +P  V  P L     Q
Sbjct: 353 G-ELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQ 356


HSP 3 Score: 76.6 bits (187), Expect = 4.0e-14
Identity = 56/200 (28.00%), Postives = 94/200 (47.00%), Query Frame = 1 

Query: 66  WGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCDTLESV 125
           WG   +G+LGLG+ DS+  P +    ++ S   +  VACG  HT  L+ ++R   T    
Sbjct: 54  WGSGDYGRLGLGNLDSQWTPAVCSALSDHS---ITAVACGGAHTLFLTETRRVFAT---- 113

Query: 126 CWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLWSWGME 185
               GL + GQLG    ++  +  P++       ++ ++ G +H++ ++  G+L+ WG  
Sbjct: 114 ----GLNDCGQLGVSDVKSHAM-DPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKN 173

Query: 186 RG--LGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDGYKL 245
               LGL           G   + +    +  E+   +    VA G+ H+V V  DG ++
Sbjct: 174 SSGQLGL-----------GKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVT-DGGEV 229

Query: 246 WSWGRGRSGVLGNGKAVDCF 264
            SWG G SG LG+G     F
Sbjct: 234 LSWGGGGSGRLGHGHQSSLF 229

[Close]
BLAST of Cucsa.161260.4 vs. NCBI nr
Match: gi|778672037|ref|XP_004148391.2| (PREDICTED: ultraviolet-B receptor UVR8 [Cucumis sativus])

HSP 1 Score: 871.3 bits (2250), Expect = 6.8e-250
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 60
           MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED
Sbjct: 162 MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 221

Query: 61  LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 120
           LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD
Sbjct: 222 LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 281

Query: 121 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 180
           TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW
Sbjct: 282 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 341

Query: 181 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 240
           SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG
Sbjct: 342 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 401

Query: 241 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDK 300
           YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDK
Sbjct: 402 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDK 461

Query: 301 VEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN 360
           VEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN
Sbjct: 462 VEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN 521

Query: 361 SGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSATPPN 420
           SGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSATPPN
Sbjct: 522 SGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSATPPN 581

[Close]
BLAST of Cucsa.161260.4 vs. NCBI nr
Match: gi|659088491|ref|XP_008445009.1| (PREDICTED: regulator of chromosome condensation isoform X1 [Cucumis melo])

HSP 1 Score: 810.4 bits (2092), Expect = 1.4e-231
Identity = 393/420 (93.57%), Postives = 403/420 (95.95%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 60
           MWGNCPKP+GENEV LSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED
Sbjct: 167 MWGNCPKPNGENEVSLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 226

Query: 61  LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 120
           LVCYSWGDNSHGQLGLGD+DSRA PQIIETFNEASPWAVYE+ACGAFHTAL+S SKRPCD
Sbjct: 227 LVCYSWGDNSHGQLGLGDRDSRARPQIIETFNEASPWAVYEIACGAFHTALVSRSKRPCD 286

Query: 121 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 180
           TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELP+SVSLISV CGLFHTSVVSSGGDLW
Sbjct: 287 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPKSVSLISVDCGLFHTSVVSSGGDLW 346

Query: 181 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 240
           SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSG+ESPKFLDPVQVACGAAHTVIVAHDG
Sbjct: 347 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGSESPKFLDPVQVACGAAHTVIVAHDG 406

Query: 241 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDK 300
           YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPL+EDFDQEETETK EEDKVEENKT    
Sbjct: 407 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLDEDFDQEETETKSEEDKVEENKT---- 466

Query: 301 VEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN 360
                 EEVTEENKKLLMAMEEIKLLL+KLSIMERYASFLHGSIFGKPFQEGDIPLSLRN
Sbjct: 467 ------EEVTEENKKLLMAMEEIKLLLEKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN 526

Query: 361 SGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSATPPN 420
           SGSFDIAKEWESMLESSDRSNLLRLE VYQNMLASIKDKI+KKRVQELVKEFLQS+T PN
Sbjct: 527 SGSFDIAKEWESMLESSDRSNLLRLEVVYQNMLASIKDKIMKKRVQELVKEFLQSSTSPN 576

[Close]
BLAST of Cucsa.161260.4 vs. NCBI nr
Match: gi|659088493|ref|XP_008445010.1| (PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform X2 [Cucumis melo])

HSP 1 Score: 810.4 bits (2092), Expect = 1.4e-231
Identity = 393/420 (93.57%), Postives = 403/420 (95.95%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 60
           MWGNCPKP+GENEV LSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED
Sbjct: 162 MWGNCPKPNGENEVSLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 221

Query: 61  LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 120
           LVCYSWGDNSHGQLGLGD+DSRA PQIIETFNEASPWAVYE+ACGAFHTAL+S SKRPCD
Sbjct: 222 LVCYSWGDNSHGQLGLGDRDSRARPQIIETFNEASPWAVYEIACGAFHTALVSRSKRPCD 281

Query: 121 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 180
           TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELP+SVSLISV CGLFHTSVVSSGGDLW
Sbjct: 282 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPKSVSLISVDCGLFHTSVVSSGGDLW 341

Query: 181 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 240
           SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSG+ESPKFLDPVQVACGAAHTVIVAHDG
Sbjct: 342 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGSESPKFLDPVQVACGAAHTVIVAHDG 401

Query: 241 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEEDK 300
           YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPL+EDFDQEETETK EEDKVEENKT    
Sbjct: 402 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLDEDFDQEETETKSEEDKVEENKT---- 461

Query: 301 VEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN 360
                 EEVTEENKKLLMAMEEIKLLL+KLSIMERYASFLHGSIFGKPFQEGDIPLSLRN
Sbjct: 462 ------EEVTEENKKLLMAMEEIKLLLEKLSIMERYASFLHGSIFGKPFQEGDIPLSLRN 521

Query: 361 SGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSATPPN 420
           SGSFDIAKEWESMLESSDRSNLLRLE VYQNMLASIKDKI+KKRVQELVKEFLQS+T PN
Sbjct: 522 SGSFDIAKEWESMLESSDRSNLLRLEVVYQNMLASIKDKIMKKRVQELVKEFLQSSTSPN 571

[Close]
BLAST of Cucsa.161260.4 vs. NCBI nr
Match: gi|659088493|ref|XP_008445010.1| (PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform X2 [Cucumis melo])

HSP 1 Score: 42.0 bits (97), Expect = 3.1e+00
Identity = 20/45 (44.44%), Postives = 28/45 (62.22%), Query Frame = 1 

Query: 224 VQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTPTVV 269
           V++A G AHT+++  DG +++SWGRG  G LG G   D   P  V
Sbjct: 18  VEIAAGEAHTIVLTGDG-RVYSWGRGMFGRLGTGAESDELFPVRV 61


HSP 2 Score: 629.8 bits (1623), Expect = 3.4e-177
Identity = 293/418 (70.10%), Postives = 351/418 (83.97%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 60
           MWG CP+ +  ++ GL++VSSF+P PVW+FHGHTVVKVACGNEH+VALVS GETY K +D
Sbjct: 161 MWGLCPQENSSSDGGLTFVSSFSPIPVWDFHGHTVVKVACGNEHVVALVSAGETY-KGDD 220

Query: 61  LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 120
           LVCYSWG N HGQLGLGD++SR  P+I+ETFN+  PW VYEVACGAFHTALL+H KRP +
Sbjct: 221 LVCYSWGGNGHGQLGLGDRESRVHPEIVETFNQDIPWTVYEVACGAFHTALLTHRKRPSE 280

Query: 121 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 180
           TLES+CWTFGLG+ GQLGHGTTQ+  +P+PVKELPQ V L+SV CGLFHTSVVSS GD+W
Sbjct: 281 TLESMCWTFGLGDKGQLGHGTTQSTLVPEPVKELPQPVYLVSVDCGLFHTSVVSSAGDVW 340

Query: 181 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 240
           SWGME+GLGLCPDASFTGT+ GDA+SPL I   G   PKF DPVQ++CGAAHTV+VAHDG
Sbjct: 341 SWGMEKGLGLCPDASFTGTDAGDALSPLQISGDGLHEPKFRDPVQISCGAAHTVVVAHDG 400

Query: 241 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEE-TETKCEEDKVEENKTEED 300
           YKLWSWGRGRSGVLGNGK +DCFTP++VLWPPLNEDF QEE   T  E DK+ ++K    
Sbjct: 401 YKLWSWGRGRSGVLGNGKTIDCFTPSMVLWPPLNEDFQQEELNSTVGEGDKIVDHKNS-- 460

Query: 301 KVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLR 360
                  +  +E +KKL +AMEE+KLL  KLSIMERYAS LHGSIFGKPF+E DIP+SL+
Sbjct: 461 -------DAGSEMDKKLSLAMEEMKLLQSKLSIMERYASVLHGSIFGKPFEEQDIPISLQ 520

Query: 361 NSGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSAT 418
           NSG+FD+A+EWE+MLESSDRS L+RLE  Y+NMLA +KDK++KKR+QE++KE+L S+T
Sbjct: 521 NSGTFDVAREWENMLESSDRSKLVRLELFYRNMLAGVKDKMMKKRIQEIIKEYLPSST 568

[Close]
BLAST of Cucsa.161260.4 vs. NCBI nr
Match: gi|590573502|ref|XP_007012140.1| (Regulator of chromosome condensation family protein isoform 3 [Theobroma cacao])

HSP 1 Score: 629.8 bits (1623), Expect = 3.4e-177
Identity = 293/418 (70.10%), Postives = 351/418 (83.97%), Query Frame = 1 

Query: 1   MWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAED 60
           MWG CP+ +  ++ GL++VSSF+P PVW+FHGHTVVKVACGNEH+VALVS GETY K +D
Sbjct: 75  MWGLCPQENSSSDGGLTFVSSFSPIPVWDFHGHTVVKVACGNEHVVALVSAGETY-KGDD 134

Query: 61  LVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRPCD 120
           LVCYSWG N HGQLGLGD++SR  P+I+ETFN+  PW VYEVACGAFHTALL+H KRP +
Sbjct: 135 LVCYSWGGNGHGQLGLGDRESRVHPEIVETFNQDIPWTVYEVACGAFHTALLTHRKRPSE 194

Query: 121 TLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGDLW 180
           TLES+CWTFGLG+ GQLGHGTTQ+  +P+PVKELPQ V L+SV CGLFHTSVVSS GD+W
Sbjct: 195 TLESMCWTFGLGDKGQLGHGTTQSTLVPEPVKELPQPVYLVSVDCGLFHTSVVSSAGDVW 254

Query: 181 SWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAHDG 240
           SWGME+GLGLCPDASFTGT+ GDA+SPL I   G   PKF DPVQ++CGAAHTV+VAHDG
Sbjct: 255 SWGMEKGLGLCPDASFTGTDAGDALSPLQISGDGLHEPKFRDPVQISCGAAHTVVVAHDG 314

Query: 241 YKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEE-TETKCEEDKVEENKTEED 300
           YKLWSWGRGRSGVLGNGK +DCFTP++VLWPPLNEDF QEE   T  E DK+ ++K    
Sbjct: 315 YKLWSWGRGRSGVLGNGKTIDCFTPSMVLWPPLNEDFQQEELNSTVGEGDKIVDHKNS-- 374

Query: 301 KVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPFQEGDIPLSLR 360
                  +  +E +KKL +AMEE+KLL  KLSIMERYAS LHGSIFGKPF+E DIP+SL+
Sbjct: 375 -------DAGSEMDKKLSLAMEEMKLLQSKLSIMERYASVLHGSIFGKPFEEQDIPISLQ 434

Query: 361 NSGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSAT 418
           NSG+FD+A+EWE+MLESSDRS L+RLE  Y+NMLA +KDK++KKR+QE++KE+L S+T
Sbjct: 435 NSGTFDVAREWENMLESSDRSKLVRLELFYRNMLAGVKDKMMKKRIQEIIKEYLPSST 482

The following BLAST results are available for this feature:
BLAST of Cucsa.161260.4 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UVR8_ARATH1.1e-2129.76Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1[more]
HERC5_HUMAN1.6e-2026.15E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2[more]
HERC1_HUMAN1.3e-1929.61Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2[more]
HERC2_HUMAN3.9e-1930.17E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2[more]
HERC2_MOUSE6.6e-1930.13E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3[more]
BLAST of Cucsa.161260.4 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPS2_CUCSA4.7e-250100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373550 PE=4 SV=1[more]
A0A061GIS5_THECC2.4e-17770.10Regulator of chromosome condensation family protein isoform 3 OS=Theobroma cacao... [more]
A0A061GK39_THECC2.4e-17770.10Regulator of chromosome condensation family protein isoform 2 OS=Theobroma cacao... [more]
A0A061GKT1_THECC2.4e-17770.10Regulator of chromosome condensation family protein isoform 1 OS=Theobroma cacao... [more]
A0A0D2QJR9_GOSRA1.6e-16868.99Uncharacterized protein OS=Gossypium raimondii GN=B456_001G026900 PE=4 SV=1[more]
BLAST of Cucsa.161260.4 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G11580.12.3e-12353.68 Regulator of chromosome condensation (RCC1) family protein[more]
AT5G12350.16.5e-2530.66 Regulator of chromosome condensation (RCC1) family with FYVE zinc fi... [more]
AT5G19420.22.1e-2330.89 Regulator of chromosome condensation (RCC1) family with FYVE zinc fi... [more]
AT5G63860.16.1e-2329.76 Regulator of chromosome condensation (RCC1) family protein[more]
AT5G08710.18.3e-2029.07 Regulator of chromosome condensation (RCC1) family protein[more]
BLAST of Cucsa.161260.4 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778672037|ref|XP_004148391.2|6.8e-250100.00PREDICTED: ultraviolet-B receptor UVR8 [Cucumis sativus][more]
gi|659088491|ref|XP_008445009.1|1.4e-23193.57PREDICTED: regulator of chromosome condensation isoform X1 [Cucumis melo][more]
gi|659088493|ref|XP_008445010.1|1.4e-23193.57PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform X2 [Cucumis melo][more]
gi|659088493|ref|XP_008445010.1|3.1e+0044.44PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform X2 [Cucumis melo][more]
gi|590573502|ref|XP_007012140.1|3.4e-17770.10Regulator of chromosome condensation family protein isoform 3 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsa.161260Cucsa.161260gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsa.161260.4Cucsa.161260.4-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.161260.4.five_prime_UTR.1Cucsa.161260.4.five_prime_UTR.1five_prime_UTR
Cucsa.161260.4.five_prime_UTR.2Cucsa.161260.4.five_prime_UTR.2five_prime_UTR
Cucsa.161260.4.five_prime_UTR.3Cucsa.161260.4.five_prime_UTR.3five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.161260.4.CDS.1Cucsa.161260.4.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.161260.4.three_prime_UTR.1Cucsa.161260.4.three_prime_UTR.1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 166..184
score: 1.3E-6coord: 38..54
score: 1.3E-6coord: 236..257
score: 1.
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 64..112
score: 1.2E-12coord: 127..172
score: 1.5
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 102..112
score: -coord: 38..48
scor
IPR000408Regulator of chromosome condensation, RCC1PROFILEPS50012RCC1_3coord: 1..51
score: 9.057coord: 61..115
score: 14.926coord: 177..239
score: 8.615coord: 124..176
score: 13
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3DG3DSA:2.130.10.30coord: 2..273
score: 2.2
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIunknownSSF50985RCC1/BLIP-IIcoord: 11..275
score: 2.01
NoneNo IPR availableunknownCoilCoilcoord: 306..326
scor
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 6..416
score: 2.2E
NoneNo IPR availablePANTHERPTHR22870:SF155SUBFAMILY NOT NAMEDcoord: 6..416
score: 2.2E