Cucsa.153500.1 (mRNA) Cucumber (Gy14) v1

Overview
NameCucsa.153500.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold01124 : 577898 .. 579159 (+)
Sequence length1262
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGGCCCTCCTTCTAATTGACAGGACTACCTAAAGTTGGGCACGATCCATTACATAATTGTCTTTGACACATCGGATTTGCACCTCAAATATAAGGGTCTTAGTCAAGTGTGCATGCGGAATGCACCTAAAGAAAGTTTAGGTTAAGACAACTGTTGTTTCTTCAAAATTTCAAATTTACTCCTCTTGAAAAGATCTCTAAAGCAATCAAAATTCCTGAAAATTTAGAGAGAATGGAAGTGGCAAATAAAATTCTACCATACAAAATAAATCTTTGTCAAAGGATGCCCAATATCAACAATGAACCTGAGACAACAGCACATATATCAAAAAATGCAAATATTACAAACAAGGTTTGGAGAGCTTTGTTGAAAAGGGTATGCCATTTGAAAAGTTCACATAGCATTATAAAGAATGTCCATACTAAGTGCATTATAAATGATGACTTAATATTACACACATTAAGTGCTACTGCAACAATATGAAGCATATACCAGAAAGTAAAAAATATAGCCTCCATTGTAACAAAATGACTATACTTCAGAAATGCATAAATCATAACCATACCTTCCCTGTATGTCTCGGGCTCCCACTTTAATGATATGGTTTTTGTGAGTCATTTTAGTTCATCACCTTATCATCTTGCAGATATGCTCATGGACACCCTATGCATTTTTTGGTCTTTCCTTTCAATATAGAAGAACATGTAGTAAATTTtGCTGCTAATATACTTATTGTAAaAAAaGGGAGAGAGAATATACCCATCATTATCGATAATCACTTCCCTCTATCCTTCAATCAAAGCACAATCCAAATCAAATAAGAGTAAGAGGTGTTTATGTCACAAAAGAAACCATAAAGCTTCCAAGATAATAACAATGGAAAATAGATTTCAATGACACCTCTAGGTTTAATAGCAAATGCCTTACCTTGCAAATGTCAGACTCCTCTCTCTGCTTAAGAGAAGTAGGACCATTATTGCATACTGACTTCCAATACCAACGATTCAAGCACAATATTAAATTTAACTTAACAGCCATCCACAACAAGACCAATGTAAAAGGAGAAATAGAGGTGACGAAGCCCCGCCATCAAGGAACAAATAGAAATAGAATTCACAAACCCAAGCCAATAAGCAAAGAAAGGAAATAGAATCGACATAAACCATGTGCGTACAAGTTATGAGGTATATTTCTCAATTAAAGAAGAAaTAGAATTCACAAaCCcAAGCCATTAAGGAAAGAAAGGAAATAGAATCGACAT

mRNA sequence

GAGGCCCTCCTTCTAATTGACAGGACTACCTAAAGTTGGGCACGATCCATTACATAATTGTCTTTGACACATCGGATTTGCACCTCAAATATAAGGGTCTTAGTCAAGTGTGCATGCGGAATGCACCTAAAGAAAGTTTAGGTTAAGACAACTGTTGTTTCTTCAAAATTTCAAATTTACTCCTCTTGAAAAGATCTCTAAAGCAATCAAAATTCCTGAAAATTTAGAGAGAATGGAAGTGGCAAATAAAATTCTACCATACAAAATAAATCTTTGTCAAAGGATGCCCAATATCAACAATGAACCTGAGACAACAGCACATATATCAAAAAATGCAAATATTACAAACAAGGTTTGGAGAGCTTTGTTGAAAAGGGTATGCCATTTGAAAAGTTCACATAGCATTATAAAGAATGTCCATACTAAGTGCATTATAAATGATGACTTAATATTACACACATTAAGTGCTACTGCAACAATATGAAGCATATACCAGAAAGTAAAAAATATAGCCTCCATTGTAACAAAATGACTATACTTCAGAAATGCATAAATCATAACCATACCTTCCCTGTATGTCTCGGGCTCCCACTTTAATGATATGGTTTTTGTGAGTCATTTTAGTTCATCACCTTATCATCTTGCAGATATGCTCATGGACACCCTATGCATTTTTTGGTCTTTCCTTTCAATATAGAAGAACATGTAGTAAATTTTGCTGCTAATATACTTATTGTAAAAAAAGGGAGAGAGAATATACCCATCATTATCGATAATCACTTCCCTCTATCCTTCAATCAAAGCACAATCCAAATCAAATAAGAGTAAGAGGTGTTTATGTCACAAAAGAAACCATAAAGCTTCCAAGATAATAACAATGGAAAATAGATTTCAATGACACCTCTAGGTTTAATAGCAAATGCCTTACCTTGCAAATGTCAGACTCCTCTCTCTGCTTAAGAGAAGTAGGACCATTATTGCATACTGACTTCCAATACCAACGATTCAAGCACAATATTAAATTTAACTTAACAGCCATCCACAACAAGACCAATGTAAAAGGAGAAATAGAGGTGACGAAGCCCCGCCATCAAGGAACAAATAGAAATAGAATTCACAAACCCAAGCCAATAAGCAAAGAAAGGAAATAGAATCGACATAAACCATGTGCGTACAAGTTATGAGGTATATTTCTCAATTAAAGAAGAAATAGAATTCACAAACCCAAGCCATTAAGGAAAGAAAGGAAATAGAATCGACAT

Coding sequence (CDS)

ATGGAAGTGGCAAATAAAATTCTACCATACAAAATAAATCTTTGTCAAAGGATGCCCAATATCAACAATGAACCTGAGACAACAGCACATATATCAAAAAATGCAAATATTACAAACAAGGTTTGGAGAGCTTTGTTGAAAAGGGTATGCCATTTGAAAAGTTCACATAGCATTATAAAGAATGTCCATACTAAGTGCATTATAAATGATGACTTAATATTACACACATTAAGTGCTACTGCAACAATATGA

Protein sequence

MEVANKILPYKINLCQRMPNINNEPETTAHISKNANITNKVWRALLKRVCHLKSSHSIIKNVHTKCIINDDLILHTLSATATI*
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsa.153500Cucsa.153500gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsa.153500.1Cucsa.153500.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.153500.1.five_prime_UTR.1Cucsa.153500.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.153500.1.CDS.1Cucsa.153500.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.153500.1.three_prime_UTR.1Cucsa.153500.1.three_prime_UTR.1three_prime_UTR