Cucsa.153070.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGTATCTTTCCTTCCCATTAATCGCATCCTCTTCCTCACTTTCCCCCTTCACTTCATCTTCTCACCATAACCCTCCTTCAAGAACAACACCACAATAATCAATCCCTCTTCGATCTCTTCTTTCTGGATTCCCATTCCCCTGTTTGCTTAATGCACAGTAATCCAACGCGCTTAACTTGACCTATCCCCGATCCAATCATGAATCAGGGCGTCCTCCTCCGATCGCCCCCAGGTACTCGCCAACAACCCCTACTCAGAGACAAATCAGGCAACAGAGTTAAAGAAAAGCGCCGGTTCGCGGAGGTTGCCGGTGGAACAGCAGCGGAGTGCGCGGCAATATGTTGTTGCTTTCCATGCAGTATGATGAATCTTCTGATATTGACGGTGTATAAAGTTCCAGTAGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGGGAGATCGCAAAGAAAAACGCGGGGGCGGGAGGTAAGGAGTGGGCCGGGAATGATGATGGTGGTGGTGAAAAAGAGGATTGGGGAGAATCGCTTCCGTCCTCGTATTTGTCATCGGAGGATATTGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACTGGCTTCTGGAGGACTCCATCGCAAAGAGAAACTTAA TTTTGTATCTTTCCTTCCCATTAATCGCATCCTCTTCCTCACTTTCCCCCTTCACTTCATCTTCTCACCATAACCCTCCTTCAAGAACAACACCACAATAATCAATCCCTCTTCGATCTCTTCTTTCTGGATTCCCATTCCCCTGTTTGCTTAATGCACAGTAATCCAACGCGCTTAACTTGACCTATCCCCGATCCAATCATGAATCAGGGCGTCCTCCTCCGATCGCCCCCAGGTACTCGCCAACAACCCCTACTCAGAGACAAATCAGGCAACAGAGTTAAAGAAAAGCGCCGGTTCGCGGAGGTTGCCGGTGGAACAGCAGCGGAGTGCGCGGCAATATGTTGTTGCTTTCCATGCAGTATGATGAATCTTCTGATATTGACGGTGTATAAAGTTCCAGTAGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGGGAGATCGCAAAGAAAAACGCGGGGGCGGGAGGTAAGGAGTGGGCCGGGAATGATGATGGTGGTGGTGAAAAAGAGGATTGGGGAGAATCGCTTCCGTCCTCGTATTTGTCATCGGAGGATATTGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACTGGCTTCTGGAGGACTCCATCGCAAAGAGAAACTTAA ATGAATCAGGGCGTCCTCCTCCGATCGCCCCCAGGTACTCGCCAACAACCCCTACTCAGAGACAAATCAGGCAACAGAGTTAAAGAAAAGCGCCGGTTCGCGGAGGTTGCCGGTGGAACAGCAGCGGAGTGCGCGGCAATATGTTGTTGCTTTCCATGCAGTATGATGAATCTTCTGATATTGACGGTGTATAAAGTTCCAGTAGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGGGAGATCGCAAAGAAAAACGCGGGGGCGGGAGGTAAGGAGTGGGCCGGGAATGATGATGGTGGTGGTGAAAAAGAGGATTGGGGAGAATCGCTTCCGTCCTCGTATTTGTCATCGGAGGATATTGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACTGGCTTCTGGAGGACTCCATCGCAAAGAGAAACTTAA MNQGVLLRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKVWNKRGKRREIAKKNAGAGGKEWAGNDDGGGEKEDWGESLPSSYLSSEDIELEKEMWERFYGTGFWRTPSQRET*
BLAST of Cucsa.153070.1 vs. TrEMBL
Match: A0A0A0L1Q3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279850 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 2.3e-82 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. TrEMBL
Match: A0A061GTT8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041188 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.3e-32 Identity = 74/156 (47.44%), Postives = 100/156 (64.10%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. TrEMBL
Match: W9QVY0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017152 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30 Identity = 72/161 (44.72%), Postives = 98/161 (60.87%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. TrEMBL
Match: A0A067EDE1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031729mg PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.1e-27 Identity = 71/151 (47.02%), Postives = 91/151 (60.26%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. TrEMBL
Match: W9S5C6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006446 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 4.7e-27 Identity = 70/152 (46.05%), Postives = 93/152 (61.18%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. TAIR10
Match: AT2G27180.1 (AT2G27180.1 unknown protein) HSP 1 Score: 111.3 bits (277), Expect = 5.1e-25 Identity = 62/161 (38.51%), Postives = 90/161 (55.90%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. TAIR10
Match: AT5G06380.1 (AT5G06380.1 unknown protein) HSP 1 Score: 97.8 bits (242), Expect = 5.8e-21 Identity = 54/121 (44.63%), Postives = 71/121 (58.68%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. TAIR10
Match: AT3G11690.1 (AT3G11690.1 unknown protein) HSP 1 Score: 95.9 bits (237), Expect = 2.2e-20 Identity = 55/149 (36.91%), Postives = 81/149 (54.36%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. NCBI nr
Match: gi|449449000|ref|XP_004142253.1| (PREDICTED: uncharacterized protein LOC101219884 [Cucumis sativus]) HSP 1 Score: 312.8 bits (800), Expect = 3.3e-82 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. NCBI nr
Match: gi|659097839|ref|XP_008449841.1| (PREDICTED: uncharacterized protein LOC103491601 [Cucumis melo]) HSP 1 Score: 277.7 bits (709), Expect = 1.2e-71 Identity = 139/149 (93.29%), Postives = 140/149 (93.96%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. NCBI nr
Match: gi|590586119|ref|XP_007015616.1| (Uncharacterized protein TCM_041188 [Theobroma cacao]) HSP 1 Score: 147.5 bits (371), Expect = 1.8e-32 Identity = 74/156 (47.44%), Postives = 100/156 (64.10%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. NCBI nr
Match: gi|703077180|ref|XP_010090525.1| (hypothetical protein L484_017152 [Morus notabilis]) HSP 1 Score: 141.0 bits (354), Expect = 1.7e-30 Identity = 72/161 (44.72%), Postives = 98/161 (60.87%), Query Frame = 1
BLAST of Cucsa.153070.1 vs. NCBI nr
Match: gi|694407769|ref|XP_009378608.1| (PREDICTED: uncharacterized protein LOC103967087 [Pyrus x bretschneideri]) HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27 Identity = 72/151 (47.68%), Postives = 89/151 (58.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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