Cucsa.153060.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCTTGAAAGAGATTCTGACCAGACGACCCGTCGCTGCCACCATCAGGCTCACCGTCCCTGCTGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTTGGTCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCCGAGACACCCATGGCCGTAACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTTACTTGGTACTTGAAGAAAGCTGCTGGGATCGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCAGTCAAGCACATTTATGAGATCGCTAAAGTCAAGCAGTCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTTAACGAATTGGAGTAA ATGGCCACCTTGAAAGAGATTCTGACCAGACGACCCGTCGCTGCCACCATCAGGCTCACCGTCCCTGCTGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTTGGTCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCCGAGACACCCATGGCCGTAACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTTACTTGGTACTTGAAGAAAGCTGCTGGGATCGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCAGTCAAGCACATTTATGAGATCGCTAAAGTCAAGCAGTCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTTAACGAATTGGAGTAA ATGGCCACCTTGAAAGAGATTCTGACCAGACGACCCGTCGCTGCCACCATCAGGCTCACCGTCCCTGCTGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTTGGTCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCCGAGACACCCATGGCCGTAACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTTACTTGGTACTTGAAGAAAGCTGCTGGGATCGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCAGTCAAGCACATTTATGAGATCGCTAAAGTCAAGCAGTCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTTAACGAATTGGAGTAA MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE*
BLAST of Cucsa.153060.1 vs. Swiss-Prot
Match: RM19_SCHPO (54S ribosomal protein L19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl19 PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 3.5e-34 Identity = 70/135 (51.85%), Postives = 90/135 (66.67%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. Swiss-Prot
Match: RL11_AQUAE (50S ribosomal protein L11 OS=Aquifex aeolicus (strain VF5) GN=rplK PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.0e-29 Identity = 66/140 (47.14%), Postives = 94/140 (67.14%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. Swiss-Prot
Match: RL11_RHOP5 (50S ribosomal protein L11 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplK PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.0e-29 Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. Swiss-Prot
Match: RL11_PARL1 (50S ribosomal protein L11 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplK PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 4.4e-29 Identity = 66/141 (46.81%), Postives = 90/141 (63.83%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. Swiss-Prot
Match: RL11_BLOFL (50S ribosomal protein L11 OS=Blochmannia floridanus GN=rplK PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 5.8e-29 Identity = 65/148 (43.92%), Postives = 96/148 (64.86%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. TrEMBL
Match: A0A0A0KWT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279840 PE=3 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 4.1e-82 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. TrEMBL
Match: A0A067G7I7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031693mg PE=3 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 6.1e-78 Identity = 146/155 (94.19%), Postives = 152/155 (98.06%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. TrEMBL
Match: A0A061DFE6_THECC (Mitochondrial ribosomal protein L11 OS=Theobroma cacao GN=TCM_000052 PE=3 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 8.0e-78 Identity = 144/155 (92.90%), Postives = 153/155 (98.71%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. TrEMBL
Match: V4RUW5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026688mg PE=3 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.4e-77 Identity = 145/155 (93.55%), Postives = 152/155 (98.06%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. TrEMBL
Match: A0A0D2NBV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G199600 PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 3.0e-77 Identity = 143/155 (92.26%), Postives = 153/155 (98.71%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. TAIR10
Match: AT4G35490.1 (AT4G35490.1 mitochondrial ribosomal protein L11) HSP 1 Score: 273.9 bits (699), Expect = 6.3e-74 Identity = 130/154 (84.42%), Postives = 147/154 (95.45%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. TAIR10
Match: AT1G32990.1 (AT1G32990.1 plastid ribosomal protein l11) HSP 1 Score: 104.0 bits (258), Expect = 8.6e-23 Identity = 60/140 (42.86%), Postives = 80/140 (57.14%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. TAIR10
Match: AT5G51610.1 (AT5G51610.1 Ribosomal protein L11 family protein) HSP 1 Score: 52.0 bits (123), Expect = 3.9e-07 Identity = 26/79 (32.91%), Postives = 46/79 (58.23%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. NCBI nr
Match: gi|449448846|ref|XP_004142176.1| (PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis sativus]) HSP 1 Score: 312.0 bits (798), Expect = 5.9e-82 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. NCBI nr
Match: gi|659097841|ref|XP_008449842.1| (PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo]) HSP 1 Score: 309.7 bits (792), Expect = 2.9e-81 Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. NCBI nr
Match: gi|641852647|gb|KDO71512.1| (hypothetical protein CISIN_1g031693mg [Citrus sinensis]) HSP 1 Score: 298.1 bits (762), Expect = 8.8e-78 Identity = 146/155 (94.19%), Postives = 152/155 (98.06%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. NCBI nr
Match: gi|590701799|ref|XP_007046480.1| (Mitochondrial ribosomal protein L11 [Theobroma cacao]) HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77 Identity = 144/155 (92.90%), Postives = 153/155 (98.71%), Query Frame = 1
BLAST of Cucsa.153060.1 vs. NCBI nr
Match: gi|567865291|ref|XP_006425268.1| (hypothetical protein CICLE_v10026688mg [Citrus clementina]) HSP 1 Score: 297.0 bits (759), Expect = 2.0e-77 Identity = 145/155 (93.55%), Postives = 152/155 (98.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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