Cucsa.143350.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGAAGTTGATTGGTTGTGATGAAGAGAAGGGGGCGATGCTTGTTGGTGTTTGTTGGTGGTGAGAAAAGAGGGTTGAAAGTGAAGAAATTCAATTCATTAACTTTATTTTTtCTATCATTTCCTCATTAAGCTTTCACGAGCGTTCCCCAATTTTTCTTCTTCGCAAACAAAACGCACCCACGGGGGCGAAGTAGCAACGGGAACAAATCAAAATTtCCCCTTTTTtCTTCATTTTTAATCAAAtCGGTTTGTGAGATGAGGAAAACAGGAGGAACCGAGAAGAAGAGGGTCAGAAGGCAATCAACTGCTGTTCAAAATGCTGCCAAAGATCCCAATTCCGATACTCCTCCTAGGGTTTGCCTTCTTTGCTGTCCTTTTTTTtCCCTCTAACATCTTCATTTCTCCTCTAATTTTTTtGTTTTCTGATCTGGgTTTTTCTTGCCTTCAAGAGAGAACATTGCTTTCAGTGTGATTATTTGTTTGATTCTACCATGACCCAATTGCCGTATCCTTGCCATATGGACATTTGATGTGTTTTTGGACATGTTCTATGAATCTCTCTTTTGGATTCTTATATTTGCCTTTTTGCTTTTCCGAGAAATGATTGATGGACGTAAAGTTTTCATAATCTGAAATGGGTGGTGGCGTGTGATTGGAGGATTCATTAACTCTACCATCTATTTCCAAGATCGTGCTAGCGAGCATCCATTGTTTtGGTTCCTTATTGAAGAAAATAAAGGAAAAGGGAGTGATTAATGTGAATGAACTGCAAAAGGGTTTTTGTAGTTTCTCAGTTTTGCAGCTTTGTAGTGTAGGTAGATGAGCAACTAGAAGTTCAAATTGTAAAAGTAAAATAGCCTGGGCTTCAATGGATCGGATTTACATTCTCCCATGTGGGCGTTGTTAATTGTTATTTTATGGTTTGAATGTAGAAAAAGTGTGACTTATGAGGTTCCATCACTCTGAATCAATTTGCAGTTTGAGCGTAGTTTTATGTTTTAGTTACGAGAAATGAATTGTAATTTAATCGTAATTTAGCAACAAGCAACAATATGATATGATTGTGCTGAAAGCGGCCATTATTTTTTTACAACGTGGGGTGTTTGGGGATCCATAATAGGATTGGTTTGTCATGTAATGTGATCCAAATCCCATGTTTAGATTAATCCGACAATTTTTAAGCCAACCTCTTTCTCACCGTTTTCATGCTTTACAATCTCATTTTCATTCCATCTTCTACCGCTAACATTTTCCAGCACTCCTCTAATTTCTACTAACCCTGATGACATTCTAGCTCCCCAAATAGCCCTTGATTCTTCTTAGTTTCCTTAGATGGATGAGAAACGTCTTAAATTACAGTGTGATGGTTATTAGGAAGTGAGTTCTTGAGTTAAAAGAGAGGGTAAGGTTAAAATGTGTGCGTTTTTGTTTCTAATAAGTTCTATTATCTCTGTAACGCTATGAGTTTAGGAGATAGTTTAGGGGAGGTTCATGAATGAAATCGATATCACCTCTGAATGAGAGAGATTCTGAAGACATGAAAGTAAGGTTGAGAAATGCTTAAAAGAATTAAAAATTACTACCTATACCAACAAGGTGCACCTCCCTTTTCGGTGACTCAATCAGAAGAACTCCAAGGTTAAGCGTGCTTAGGTTGGAACAATTCTATGTTAGGTGACCTCCTGAAAATTTTCCTCAAATGCATGTAAGTGAGGACAAAGCATGCTGAAAGAATCCGTGTAGGTTCGTGGGAAAAATTTTCAAAAGCCCTTAAGACAAGTAAGGATGATGTTTTTTACAACCTCTATCTTGTGCGTTTTTGTATTGGATTTTTCTGCCTTTTGGCTATCAATCACCAAATAACTATCTCCAACATTATGCTGAGTAAATAATCTTTGTGTGACTATCTGAGTATGATAAGGATTGGGGATGGTTTTGTTTATTTTTCTGAATTTTAACTTTCCGCGTCGCTGCAGGTCATGAATTGGTTGTTGGTGTCTACTTTTTTTTtCTTCTTTTAAATCAGTTTTCTAAATTTTTTtATTTCATTTTATCTGTCGCTGTTATCTCATCGTGGTTATCCTCACATGTATACTTTTACTTTTCAGAAACAAGCTGCAAAGAAGGATGTGTTTCAGTTGTTTTCTGAGAAAGTGAGAGACCACAAGGATTTAGAATCAAGATGGGCTGTTTtACAAGAGACACGTGTTGAGTATTTTAGAGGCAAGGATTTTGTTAGTTTTTtGAGAAATCATCCAGAGCTCAAGGATATTCTCGATTCAGATAAAAATTTGGAAACTGAAGATATTGGCAATGCATTGCTAAGTAAGAATCTCTTGGTTAGGTGTGATCGTGTGGTGAAAACTGTTCGTCCTGGAAAGAGAAAATTGTCTACATGGCCAGCACATTTGGAGATATTCCCGGTGCGGATTTTTTTtATGCATTATGTATTTCTTTTAAAGTTGGAGGTCTCATCCCTTTTCTCTtAAAAAAAAAaaGAAACTAGCTTTCATAAGGAAAAAGCCCACAAAGGGCCTCCGATCATGTAAAACAATCCCTATTTAATAATTATGAGAAATCTTGATAACTAAAGTAAGAATGGGAACATGAAATCTAGCCAGGGACCATACACCCATCATATCCCTTTTCAAGCCTCTAAACACTATTGTTACTCTCCCTCAAAGATCCTCATATAATGCACCCACACCAACAAGCCACGCTTCTCTCTTAAATAGATGATATTCTTGCTGATATGGATGTGTTTATAAATTCAGCCTCCTTAATGCAAATCTAAGCAATTGAGCAAGAAAGTTAATTACCAACCTGTTTCATAATTTAGTTTAATATCGTATATTCATATTCTCCGACCATTTTCCAGGTTCTGAATGTGCAACTCACTCTTGCAGGATCAGGTGTTCTCTGAACAGGATGCCTTTTTTGCTTGGACATTTGTTAAGCGGAGGCCATTTTGGCAGACACTTCTTTCATTTTGTTGGCCTGTGTTGACCCTTGCAATTTGCTTGTTTCCTGTATATCCTCATCAGTGCAAGCTTTTGATACTTTACTCATGCGCTGGGGTTCTGCTTCTTATACTCTCGCTTCTTTTATGTAGGTCATACAGCCCTTTTCACTGCCTTATTTTTGTGTTGTTCTTTTATATATCGATAAGTCATTCATATGCCCTTGTATTATTTCATTTTTTTCTCAATGAAGCAATTGTTTCTACCCAAATAAATCATTCATATAGTTTTGTTAATAACTTAATTTTGGGAGTGCTGCATCTGAAGCATTATGGTAGGATGCTATCAAAATTTTTTtAATGTGTCTACTTTTATTGGCTATGTTTAAGTTATAAATATGTCTGCTTTTATCGGCTACGTTTAAGTTATAAATGTGTCTACTTTTATTGGCTATGTTGGTTGACCTTTCTCTCTCTTTTTTATTTTTATTTTTATTTTTAAATTTTTAAATATTGTGAGTGATTGAGTGAGGTTTATGTGCACCTCGGCTATGAACTTTTTCTCCTTTTTTTAGTCAACATTTTTTTtGGTCCTTTTCTAGAAGTAGTGTATGGGGAGAGCATAATTTCGTTTCATATTTTTATTTATTATTATTTTAAAAATAAGAAGGGCGGAGCACAAATCTTTTGACCTCCTTAAGTTGTTCCTTTAAGGATTGGACAACATCATAAAGTAATAATTGTTGGATAGCTTGGGTGGCAAAGTCAGCGAATGATTGCAACTCTTTCTAAATTCTTGATTGTTATTTGTGGTAGCTTGGTTGGTCTTGGTTGATTTGTTGATTTATTGTGGTTCTTCTTTGTACGTATACATTAACATTCACTTCGCTAGCACAATAAAAGGTTCTCTATTATTTTAGGGGTTCCCAATTGGCTTGAGCATTAGTAAAGTAATTCATGTTTTGAATTGCTCAACTGCTCAAGTAAATTGGAACTTCTGTAGCCTTTACTATCACTTTGTGGTTCTTATCAAAATGGCTTAGAAACTTTTATATATGACACCAATTGTTGCATTGATGAATTAAACATCAGCATACCTTTGAAATGCTTATGCTGCATCTTATGCTTTCGTTTAAATTTGTAGTGAGGGGAGCAGTTTTTGGTTTATCGTATATTCTTCTGGGCAAACGTATGTGGTTTTTCCCCAATATTCTCGCGGAGGAAGCGACGTTGCGAGAGCTATTCCGGTTTTGGCCAAGTAAAGATGAAGAAGAGAAACCGAAATGGACAACTAGACTTTTTTATGCAGTGGTGGCTGTACTCATCATATTGCTGCTGAGGCACCATGCTCCCGATGAGGCTGCTAGAGCAAGGTTTGTGTCATACTCATACCTTTCTGAAATTTTATACAACTGAAGATAGAGTAGAGAAGTCTATAACAACAATCTATTAAGAACCGGCCTAGCAGGTTAGAATGTGGATCGGTTGCACATCGGTGTAGCATAAGAAAACAATTTGACAGCCAAATGTTATCTGACTTGAAAGTTTTCTGTTATGTATGGGCATCTGCTCCATTTAATTTCTCACTTGCTTTCTGTTCTTGTCATGAACTGCGTTGGCCAATGCAGATACCAAAAGCGTGTATCGAATATCATCGATGATGTTCTCGAATGGTCTCCAAGACTTGCCCTTTCAGGGATGATGGAGAAGCAGCAAACAGTGGTCAATGCCACAAATCCGGACCCCAACATGGCTGAGAACCCAACAAGTGACAGTACAGGTCCAGATTCTATCCCCGACCAACCTGAGCCTGAAACTATTGACTATGTAGAGCATTCTGATCAATATAATCACGACGGTGATCATACACATCAGTAGGCCTGTGAATCTTTTGAGGAAGAGAAGAACCATGATAAACGTGTTCCTATATGAGCTTTGTTTAATTATTATTTTTtGTTTTAAAAAaCAGTTGGTTTTTGTTACTTATAACCTTTTTTAGGAGTCACAGAAGTTGGTTTATATCTAAACTAAAGTGAGCTTTTCTTACTAAATTCCTTCTCGATTTACACCAAAAATCATCTGTGAGTTGTGTCATGTACATGTAAAACTTTTCTTTGAAATGCTTCCTTCCAATCAAGTCACCTCTTTTTTTTGTGGC CAGAAGTTGATTGGTTGTGATGAAGAGAAGGGGGCGATGCTTGTTGGTGTTTGTTGGTGGTGAGAAAAGAGGGTTGAAAGTGAAGAAATTCAATTCATTAACTTTATTTTTTCTATCATTTCCTCATTAAGCTTTCACGAGCGTTCCCCAATTTTTCTTCTTCGCAAACAAAACGCACCCACGGGGGCGAAGTAGCAACGGGAACAAATCAAAATTTCCCCTTTTTTCTTCATTTTTAATCAAATCGGTTTGTGAGATGAGGAAAACAGGAGGAACCGAGAAGAAGAGGGTCAGAAGGCAATCAACTGCTGTTCAAAATGCTGCCAAAGATCCCAATTCCGATACTCCTCCTAGGAAACAAGCTGCAAAGAAGGATGTGTTTCAGTTGTTTTCTGAGAAAGTGAGAGACCACAAGGATTTAGAATCAAGATGGGCTGTTTTACAAGAGACACGTGTTGAGTATTTTAGAGGCAAGGATTTTGTTAGTTTTTTGAGAAATCATCCAGAGCTCAAGGATATTCTCGATTCAGATAAAAATTTGGAAACTGAAGATATTGGCAATGCATTGCTAAGTAAGAATCTCTTGGTTAGGTGTGATCGTGTGGTGAAAACTGTTCGTCCTGGAAAGAGAAAATTGTCTACATGGCCAGCACATTTGGAGATATTCCCGGATCAGGTGTTCTCTGAACAGGATGCCTTTTTTGCTTGGACATTTGTTAAGCGGAGGCCATTTTGGCAGACACTTCTTTCATTTTGTTGGCCTGTGTTGACCCTTGCAATTTGCTTGTTTCCTGTATATCCTCATCAGTGCAAGCTTTTGATACTTTACTCATGCGCTGGGGTTCTGCTTCTTATACTCTCGCTTCTTTTATTGAGGGGAGCAGTTTTTGGTTTATCGTATATTCTTCTGGGCAAACGTATGTGGTTTTTCCCCAATATTCTCGCGGAGGAAGCGACGTTGCGAGAGCTATTCCGGTTTTGGCCAAGTAAAGATGAAGAAGAGAAACCGAAATGGACAACTAGACTTTTTTATGCAGTGGTGGCTGTACTCATCATATTGCTGCTGAGGCACCATGCTCCCGATGAGGCTGCTAGAGCAAGATACCAAAAGCGTGTATCGAATATCATCGATGATGTTCTCGAATGGTCTCCAAGACTTGCCCTTTCAGGGATGATGGAGAAGCAGCAAACAGTGGTCAATGCCACAAATCCGGACCCCAACATGGCTGAGAACCCAACAAGTGACAGTACAGGTCCAGATTCTATCCCCGACCAACCTGAGCCTGAAACTATTGACTATGTAGAGCATTCTGATCAATATAATCACGACGGTGATCATACACATCAGTAGGCCTGTGAATCTTTTGAGGAAGAGAAGAACCATGATAAACGTGTTCCTATATGAGCTTTGtttaattattattttttgttttaaaaaaCAGTTGGTTTTTGTTACTTATAACCTTTTTTAGGAGTCACAGAAGTTGGTTTATATCTAAACTAAAGTGAGCTTTTCTTACTAAATTCCTTCTCGATTTACACCAAAAATCATCTGTGAGTTGTGTCATGTACATGTAAAACTTTTCTTTGAAATGCTTCCTTCCAATCAAGTCACCTCTTTTTTTTGTGGC ATGAGGAAAACAGGAGGAACCGAGAAGAAGAGGGTCAGAAGGCAATCAACTGCTGTTCAAAATGCTGCCAAAGATCCCAATTCCGATACTCCTCCTAGGAAACAAGCTGCAAAGAAGGATGTGTTTCAGTTGTTTTCTGAGAAAGTGAGAGACCACAAGGATTTAGAATCAAGATGGGCTGTTTtACAAGAGACACGTGTTGAGTATTTTAGAGGCAAGGATTTTGTTAGTTTTTtGAGAAATCATCCAGAGCTCAAGGATATTCTCGATTCAGATAAAAATTTGGAAACTGAAGATATTGGCAATGCATTGCTAAGTAAGAATCTCTTGGTTAGGTGTGATCGTGTGGTGAAAACTGTTCGTCCTGGAAAGAGAAAATTGTCTACATGGCCAGCACATTTGGAGATATTCCCGGATCAGGTGTTCTCTGAACAGGATGCCTTTTTTGCTTGGACATTTGTTAAGCGGAGGCCATTTTGGCAGACACTTCTTTCATTTTGTTGGCCTGTGTTGACCCTTGCAATTTGCTTGTTTCCTGTATATCCTCATCAGTGCAAGCTTTTGATACTTTACTCATGCGCTGGGGTTCTGCTTCTTATACTCTCGCTTCTTTTATTGAGGGGAGCAGTTTTTGGTTTATCGTATATTCTTCTGGGCAAACGTATGTGGTTTTTCCCCAATATTCTCGCGGAGGAAGCGACGTTGCGAGAGCTATTCCGGTTTTGGCCAAGTAAAGATGAAGAAGAGAAACCGAAATGGACAACTAGACTTTTTTATGCAGTGGTGGCTGTACTCATCATATTGCTGCTGAGGCACCATGCTCCCGATGAGGCTGCTAGAGCAAGATACCAAAAGCGTGTATCGAATATCATCGATGATGTTCTCGAATGGTCTCCAAGACTTGCCCTTTCAGGGATGATGGAGAAGCAGCAAACAGTGGTCAATGCCACAAATCCGGACCCCAACATGGCTGAGAACCCAACAAGTGACAGTACAGGTCCAGATTCTATCCCCGACCAACCTGAGCCTGAAACTATTGACTATGTAGAGCATTCTGATCAATATAATCACGACGGTGATCATACACATCAGTAG MRKTGGTEKKRVRRQSTAVQNAAKDPNSDTPPRKQAAKKDVFQLFSEKVRDHKDLESRWAVLQETRVEYFRGKDFVSFLRNHPELKDILDSDKNLETEDIGNALLSKNLLVRCDRVVKTVRPGKRKLSTWPAHLEIFPDQVFSEQDAFFAWTFVKRRPFWQTLLSFCWPVLTLAICLFPVYPHQCKLLILYSCAGVLLLILSLLLLRGAVFGLSYILLGKRMWFFPNILAEEATLRELFRFWPSKDEEEKPKWTTRLFYAVVAVLIILLLRHHAPDEAARARYQKRVSNIIDDVLEWSPRLALSGMMEKQQTVVNATNPDPNMAENPTSDSTGPDSIPDQPEPETIDYVEHSDQYNHDGDHTHQ*
BLAST of Cucsa.143350.1 vs. TrEMBL
Match: A0A0A0LXB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G613570 PE=4 SV=1) HSP 1 Score: 745.0 bits (1922), Expect = 4.4e-212 Identity = 363/364 (99.73%), Postives = 363/364 (99.73%), Query Frame = 1
BLAST of Cucsa.143350.1 vs. TrEMBL
Match: W9RTI5_9ROSA (Translocation protein sec62 OS=Morus notabilis GN=L484_015302 PE=4 SV=1) HSP 1 Score: 578.9 bits (1491), Expect = 4.2e-162 Identity = 288/372 (77.42%), Postives = 316/372 (84.95%), Query Frame = 1
BLAST of Cucsa.143350.1 vs. TrEMBL
Match: A0A067JRE6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25930 PE=4 SV=1) HSP 1 Score: 578.2 bits (1489), Expect = 7.2e-162 Identity = 287/359 (79.94%), Postives = 310/359 (86.35%), Query Frame = 1
BLAST of Cucsa.143350.1 vs. TrEMBL
Match: V4W0L9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015746mg PE=4 SV=1) HSP 1 Score: 578.2 bits (1489), Expect = 7.2e-162 Identity = 286/356 (80.34%), Postives = 309/356 (86.80%), Query Frame = 1
BLAST of Cucsa.143350.1 vs. TrEMBL
Match: M5WTL0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007283mg PE=4 SV=1) HSP 1 Score: 576.2 bits (1484), Expect = 2.7e-161 Identity = 280/355 (78.87%), Postives = 308/355 (86.76%), Query Frame = 1
BLAST of Cucsa.143350.1 vs. TAIR10
Match: AT3G20920.1 (AT3G20920.1 translocation protein-related) HSP 1 Score: 508.1 bits (1307), Expect = 4.6e-144 Identity = 247/354 (69.77%), Postives = 290/354 (81.92%), Query Frame = 1
BLAST of Cucsa.143350.1 vs. NCBI nr
Match: gi|449442525|ref|XP_004139032.1| (PREDICTED: uncharacterized protein LOC101212624 [Cucumis sativus]) HSP 1 Score: 745.0 bits (1922), Expect = 6.4e-212 Identity = 363/364 (99.73%), Postives = 363/364 (99.73%), Query Frame = 1
BLAST of Cucsa.143350.1 vs. NCBI nr
Match: gi|659099093|ref|XP_008450425.1| (PREDICTED: uncharacterized protein LOC103492034 [Cucumis melo]) HSP 1 Score: 731.9 bits (1888), Expect = 5.6e-208 Identity = 357/364 (98.08%), Postives = 359/364 (98.63%), Query Frame = 1
BLAST of Cucsa.143350.1 vs. NCBI nr
Match: gi|1009118511|ref|XP_015875897.1| (PREDICTED: uncharacterized protein LOC107412609 [Ziziphus jujuba]) HSP 1 Score: 594.3 bits (1531), Expect = 1.4e-166 Identity = 287/363 (79.06%), Postives = 318/363 (87.60%), Query Frame = 1
BLAST of Cucsa.143350.1 vs. NCBI nr
Match: gi|568832818|ref|XP_006470623.1| (PREDICTED: uncharacterized protein LOC102629817 [Citrus sinensis]) HSP 1 Score: 580.1 bits (1494), Expect = 2.7e-162 Identity = 286/356 (80.34%), Postives = 311/356 (87.36%), Query Frame = 1
BLAST of Cucsa.143350.1 vs. NCBI nr
Match: gi|703121542|ref|XP_010102353.1| (Translocation protein sec62 [Morus notabilis]) HSP 1 Score: 578.9 bits (1491), Expect = 6.1e-162 Identity = 288/372 (77.42%), Postives = 316/372 (84.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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