Cucsa.132850.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.132850.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Reticulon-like protein
Location	scaffold01037 : 700112 .. 705567 (-)
Sequence length	1705

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATTCCCAAGAACAAAAAAATAAGAATTAAATTTTTAAAGAGAAAAAGAGAAGAAGAAATTCAAGAATCAATCCCATCTCTTCTTCCTCAACTTGCCACTTACCATTTGGCATCGTAAAGACAAAATTCTCTGTTTCTCTTCTCACCGCCACAGGGATTCTCCTTCTCTCCGCCATTCTTCCTCTACTCCCTTCACAACACCCACACCCAACTGGGATTTTCTTCTTCTGCTTCTTTCCCATCTCCCCATTTTTTCAAAATCTTCTAATTTATTCGCTGTTGGCTTCTTACTTTCTTTTCTAGACGTCGCCCATGGATTTAAGCCGGCGGAGAGCGGCGGTGGCGGCCAAAGGGAACGTGGTAGCTGGGTCTGTGTGGGAGAGTAGAATCAGGTTCGATGAAGTCAGAGGTGGGATTAAGGTTTTTAATGGAGACGATGAAAATGTTGAATGTGGGATTCCGACAACCGCCGCTTCCGCGGGCAGCGGAAGGAGGAAGACGTGGAAATCTGATGAGGGTTTTAACCCGATTCTCATTGCGGAGGAAAAACCAGAGTCGTCGCCCAGTAGCGGCGATGAACAGAGTCGGAAAAGTCCGACTCCTTCACGGAGATTGAGATCCAACAGTAGTCCGAACAAGCCAGTTCAAGTTTCCGGCGAGAAAATAGAGAGAAACTCAACGAGGAAGAAGACTGATCAATCTCGTAAATCGGCTGTTGGGCTTACCAAACCACCGACGAATGGAATCGGAAAAACCTCGTCGGAGAAAAGTTTCAAAGAGTCAAACGAATGCAGAGAGAAAGTGATTTCGTCTTCCACGTCTCAAGATTTCTTCGATGCATTTGAAGAAGAGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGGAAGAAAATCATTGCACAAACTTTCCCGGGAAACAAACAGAAATTACAGACATTAAGTAAGAAAAGTTTCCTTCACTCTATATCCCAAATTTCGATGTCAAATTTCATTTCACCTAATTCATGAAATCTTTGATGTTTTTCAGTGGATTTGATAATGTGGAGAGATTTTTCAAGATCCGGTCTGGTTTTTGGAGTGGGAAATTTGGTTATAATCCTCTCTTGTTTTATCAAAAACATCAATATCAGGTAGAAGAAAAATTCCAAATCCGCCATTGTTGAGAGGAAGAAGAAAATGGGTTGTTAAGTTCTTATTTTTTTTTTTGTGTGTGTGTGTTTTGCAGCCTTATCAGTTTGATTTCGCATATGGGTCTTCTTTATCTGACTACCATTTTCGTCCATAGTTCCATTTTTGGGAGGTATGATCTTAATTAATGGGTTTTCTTTTGTTTCTTTCATAACTAGTTTCTGAGAATTCAAAAGAAGATCTCTGATTCTCTATTTGATTTTCACGGGAAAATTACAGGAGAAAAAGGATTGATTCTAATGATGAAAATTTGGTGGTTGAAGAAGAAGATATGATCCGATTTGCTAAACGGTTAGTTCCTTTTGTGAATGAATTGCTGCAAAATCTCAAGGCTCTGTTCCGTGGAGATCCCTCTGCCACCATGAAGGTAACTTTTCTTTAATGGCCAAATTATATTGGAAATAGTTTTCTCATTTCTTAAATTATTATACCTTTTTAAAAGTAAATACATCAATTCATACCTTAGGGTAGGTTATAACAATGAGTATTATTATGTTTGGTAAGGTATTATAGTTTGTAATTTAGCACATATGAACCTAACTCAATTTCGTTCTTAGTTAATTGGAATCATATTCGATCATAGAGTGGAAAAGTAGGAGGTTTTACTGCTTATGACTATCTCTTTTTTCATTTTCATTGAGGGTAATTTACTTTTAAATTTATTATTTTTGTAATTTTGAAAATATAAGTTGCCAATTATCATACATTTTCTTTTACTGTTTTTCAAACTCCCCTAGAAAAATCCACTTTTATATAAAAAAAAAATAGAGATTTATTTTTCCAAAATTTTGTTTCTATAATTTTTCATAAATATGCCAATATTTTCATTGAAATTTTCATAAAATTATGAATTCGATATTTTGAAAACATTGATATTTTAAACCTTCATTCTAACAAAAGTTAAAATTCTTATAAATCTCGTAATGTTTTTTTATTCCTTGAAATTGAATGATCCAACTTTGAGGTGGTTAGTTATAGCTATGATGAAAATAGGGTTTTAAAAGGCAGAGATGGTTAGAATTTAGCATTTAAATATTTTATGGTAGGATTTAATAATGAAGAAACAAAGTGGACTGTTTGATTTCTAATTGAGTGTCGGTCATATGTATTATATATGTGTATTGAATTTATGCAGATGATATTCGAACATATGAAATTCTTTTTCTTCTTTAGATTTTCAAATATATCAAAACATATCAAAATTTCAAACAGTGTCTATAAATGTCTATTGTTGATAATTTTTTAAAGTAGTCATGCTCATGTAGAATTCAAATCTCAAAATAATCTCGTTCCTTAGATAATCTCTCTAATTTAGGACAAACCATTAAAATCATAGTGAAATATACTAAATATGCAAGTGGCAATTGTAATGCTTAAACTAGCTGAAAGGTATGTCAAACCTATCTTAACTTTATTGGAAAGGCTTTAATATTTTAAGGATGAATGAAACTTTTCAAGTATTATAAAGATAAAAGCAAAAGAGAACAAATATAGTTTTTATTTAGAGAGTATACTATACAATACTTTTGTTTTGAGTTATATAATTATTGGGCTAGATGTGGAACAATAAATTTTAATAACTATATTCTATCGTGGGTTGATATGAAGTTAATTGAGTTTTGTGAAATTAGTTGAGGTGTGATGCACACAATTCAAATCTTATTTATAGAAGTATGGCTTGAATTATGAGCAACATCATTATAATATTACATGATATTGTTTAATGTTCGGAATGTGAATGTGTAGGTGGGTGTGTTGCTGTTTGTATTGGCAAAGTGGGGTAGCTTCATAACCCTTTGGAATGTCCTCAAAATTGGTAACTTTTTTATTCCCTATTATTCACTATTATTCACTTCTCTCTCTCTTTCTCTTCTGTCTTTTCAAACTCAATCCTATGCCATCAAATGATTCACTTTTTTCTTTCTTTCAAAACTACTATTTTAATATCTATCTATGGTTTAACTTATGAGGTAAATGGCTTAAATAGTAATTTGATCTTTGTTTTTAACTATTATATACATTACCAAGTTTTTGCTTCATTCTTTGTTTTATGTATGTATTCTTGAAATTCTCTCTCTCAGACGTCATTGTGTACATCTAACTTCTAACCTATTCTTGTCCATCTTACTTCACCTCCCATTGAAGTTTCTAAATTAGTTGTTTTCCTTCCTACTTCATTTCTTCATAACAATCCTCAAATTATGGTTACATAAATGTTTCATTTCCCACTTGTAATATTATCTCAACATTTTGTATAATCTAATCTGGAATGTAAATTGTTGTTACTAGTGGCACCACCCATTAGTAATAGGGTTTGTTTCAATAGCCAAACCGAATCAAATTGTAAATTTCAACTTTGGATGTGTATGTACATAATTCACTTTTTACCATTAGAAGCTCATAATTTTATAATTAGAATATTCAAATAAAATATTTTTCCTTTGGGTTTATGTATTTGTTTTTATTAATTCTGACAAAGTGATGTACTTGATTTGACTGACAGGATTCATCGGGGTTTTCACACTGCCCAAATTAATTACCCACGGTAAAAAAAAAGAAAGAAACCTTCTTCACTGACTTTGCTTTTTTACTTTTCTTTTGTTTGATACGTCTTGTCGGGGTTATAATTTGAAACGGCCGAGTACAACAAAGCACCGTACGCATTGTCTTTTGGTTCGTCGATTTGTTTGACGGGTCTGACTCCCTACCCCCATCCTGACCGTCCTTTTTTGTCCCTTCAAATAACGGCTACGTTTCCCCCTTCACATCACAATCACAAAACTCTAAAATTCCATCAATTTCTTTTTCACTAAAAAATGAAGAATTTTTTTATATTATATAAAAAAAGAGAATTTTCTTTCTTTTACTCATTTTATACGTCACCTGGGTCCCACGTCAGCCTTCACGAGATGGTTTCAGAAATTTTATTTTGTTTTTTTATTTCTAATTTTTGGGAAAAGAATAAATAATTTATTAATTTCTTTTGTCGGTGATTTCTTTTTCTTTCCATAGGTTTTCCTGTCGGATGGTTTTGTTTGGATTTTAAAGAAAAGTTTATTGATTCTTTGAATTTGGTCCTTCTCTTTTAAAACAAGTGTTCAATTATTTCTCTTTTTTTTTCCCCTCAAAATTATTATATTTTAGTTTTTGAAATTTGACTTGAATTTTGAAAACATTGGTTGAATGTATATAACTAATCAAGAAATTTAGGGGTGGGACTTGTATTCGTGGGCTATCTATGTTTGGTTTCTTCCATTCTCCAAAGAAGAAAAAGAAAAAACCAATCCTTACCTCACTGCTAAGGTTCCTATGTCTTTACCTAGGGAATTATTAAAGCCCATAGGAGTGGGCTGTCACAAACTAACCACCATGTGACTCTTTTTTTAGCCACTACTTAACCTTTGGGAGTTGTTTGACCCTCTAACCTAAGGGAAGGACTACCCTTCCCTAAGTATTTGCTATATGAACACACACTTTAATTTTGGGATTTTATCTACCTTCACTCAAAATTGTGAAGCTCACTTTTTATACTTTAGATTATCTCTCTAAGTTTCTATGTTATTTTCATTTATGTTATCTATGATTATGTGGCTGTCTAAGAAAAAATCAAGCTCTTTTCATCACTCTCGTACTTATAATACATAGGGTAATTTAACCGAATCTTGAAGTGTTTGTAATCAAAGCCACAAGCTTCTTTTACATCACTTTTTGAACTAACTATATGGCTGATATTTGCGTTCTTACGAGTAATGAATATTGTGGGGTTCTCTATTGTGAAATTAGGTGAACACTGGTTGAAACTTTGTGGGAGTTCTTGGAAGTTATGTTCCCACAAGAGAGGTGTGTTCATCGCCATCTTTTTTCTCGTATGGAATTTCTCATCGACTCTATATCGCGTATGGGCAGGTAGACGTTCTGTACTTAAAACCTGAGTTTTAGATCATAAAATGAATTCCGTGAACATAGTTTAAACATGGTCGACATTATGTTTTATATTGAAATTGGAAGTTCGATTGTGGCAGCTTTCATAGTGTTGGTTAGCTTTCGGTACTACCAGGAGTCTCCGGAGAGAGATGTTTGGGTTAAAAATGGAGAAGTAGCTTCAAGAAACAAGACCATGTCGACGAGTTCAAAGCTCAAGAAACAATATTGAGCAATTTTGATGCCTTTTTTCTCTGTTATTTATAAGATAGTTAAAAATTACCATGTAAATTCATGCACACTATGGTAGAAATCCATCTGCTTGTATCTT

mRNA sequence

AGATTCCCAAGAACAAAAAAATAAGAATTAAATTTTTAAAGAGAAAAAGAGAAGAAGAAATTCAAGAATCAATCCCATCTCTTCTTCCTCAACTTGCCACTTACCATTTGGCATCGTAAAGACAAAATTCTCTGTTTCTCTTCTCACCGCCACAGGGATTCTCCTTCTCTCCGCCATTCTTCCTCTACTCCCTTCACAACACCCACACCCAACTGGGATTTTCTTCTTCTGCTTCTTTCCCATCTCCCCATTTTTTCAAAATCTTCTAATTTATTCGCTGTTGGCTTCTTACTTTCTTTTCTAGACGTCGCCCATGGATTTAAGCCGGCGGAGAGCGGCGGTGGCGGCCAAAGGGAACGTGGTAGCTGGGTCTGTGTGGGAGAGTAGAATCAGGTTCGATGAAGTCAGAGGTGGGATTAAGGTTTTTAATGGAGACGATGAAAATGTTGAATGTGGGATTCCGACAACCGCCGCTTCCGCGGGCAGCGGAAGGAGGAAGACGTGGAAATCTGATGAGGGTTTTAACCCGATTCTCATTGCGGAGGAAAAACCAGAGTCGTCGCCCAGTAGCGGCGATGAACAGAGTCGGAAAAGTCCGACTCCTTCACGGAGATTGAGATCCAACAGTAGTCCGAACAAGCCAGTTCAAGTTTCCGGCGAGAAAATAGAGAGAAACTCAACGAGGAAGAAGACTGATCAATCTCGTAAATCGGCTGTTGGGCTTACCAAACCACCGACGAATGGAATCGGAAAAACCTCGTCGGAGAAAAGTTTCAAAGAGTCAAACGAATGCAGAGAGAAAGTGATTTCGTCTTCCACGTCTCAAGATTTCTTCGATGCATTTGAAGAAGAGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGGAAGAAAATCATTGCACAAACTTTCCCGGGAAACAAACAGAAATTACAGACATTAATGGATTTGATAATGTGGAGAGATTTTTCAAGATCCGGTCTGGTTTTTGGAGTGGGAAATTTGGTTATAATCCTCTCTTGTTTTATCAAAAACATCAATATCAGCCTTATCAGTTTGATTTCGCATATGGGTCTTCTTTATCTGACTACCATTTTCGTCCATAGTTCCATTTTTGGGAGGAGAAAAAGGATTGATTCTAATGATGAAAATTTGGTGGTTGAAGAAGAAGATATGATCCGATTTGCTAAACGGTTAGTTCCTTTTGTGAATGAATTGCTGCAAAATCTCAAGGCTCTGTTCCGTGGAGATCCCTCTGCCACCATGAAGGTGGGTGTGTTGCTGTTTGTATTGGCAAAGTGGGGTAGCTTCATAACCCTTTGGAATGTCCTCAAAATTGGTGAACACTGGTTGAAACTTTGTGGGAGTTCTTGGAAGTTATGTTCCCACAAGAGAGGTGTGTTCATCGCCATCTTTTTTCTCGTATGGAATTTCTCATCGACTCTATATCGCGTATGGGCAGCTTTCATAGTGTTGGTTAGCTTTCGGTACTACCAGGAGTCTCCGGAGAGAGATGTTTGGGTTAAAAATGGAGAAGTAGCTTCAAGAAACAAGACCATGTCGACGAGTTCAAAGCTCAAGAAACAATATTGAGCAATTTTGATGCCTTTTTTCTCTGTTATTTATAAGATAGTTAAAAATTACCATGTAAATTCATGCACACTATGGTAGAAATCCATCTGCTTGTATCTT

Coding sequence (CDS)

ATGGATTTAAGCCGGCGGAGAGCGGCGGTGGCGGCCAAAGGGAACGTGGTAGCTGGGTCTGTGTGGGAGAGTAGAATCAGGTTCGATGAAGTCAGAGGTGGGATTAAGGTTTTTAATGGAGACGATGAAAATGTTGAATGTGGGATTCCGACAACCGCCGCTTCCGCGGGCAGCGGAAGGAGGAAGACGTGGAAATCTGATGAGGGTTTTAACCCGATTCTCATTGCGGAGGAAAAACCAGAGTCGTCGCCCAGTAGCGGCGATGAACAGAGTCGGAAAAGTCCGACTCCTTCACGGAGATTGAGATCCAACAGTAGTCCGAACAAGCCAGTTCAAGTTTCCGGCGAGAAAATAGAGAGAAACTCAACGAGGAAGAAGACTGATCAATCTCGTAAATCGGCTGTTGGGCTTACCAAACCACCGACGAATGGAATCGGAAAAACCTCGTCGGAGAAAAGTTTCAAAGAGTCAAACGAATGCAGAGAGAAAGTGATTTCGTCTTCCACGTCTCAAGATTTCTTCGATGCATTTGAAGAAGAGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGGAAGAAAATCATTGCACAAACTTTCCCGGGAAACAAACAGAAATTACAGACATTAATGGATTTGATAATGTGGAGAGATTTTTCAAGATCCGGTCTGGTTTTTGGAGTGGGAAATTTGGTTATAATCCTCTCTTGTTTTATCAAAAACATCAATATCAGCCTTATCAGTTTGATTTCGCATATGGGTCTTCTTTATCTGACTACCATTTTCGTCCATAGTTCCATTTTTGGGAGGAGAAAAAGGATTGATTCTAATGATGAAAATTTGGTGGTTGAAGAAGAAGATATGATCCGATTTGCTAAACGGTTAGTTCCTTTTGTGAATGAATTGCTGCAAAATCTCAAGGCTCTGTTCCGTGGAGATCCCTCTGCCACCATGAAGGTGGGTGTGTTGCTGTTTGTATTGGCAAAGTGGGGTAGCTTCATAACCCTTTGGAATGTCCTCAAAATTGGTGAACACTGGTTGAAACTTTGTGGGAGTTCTTGGAAGTTATGTTCCCACAAGAGAGGTGTGTTCATCGCCATCTTTTTTCTCGTATGGAATTTCTCATCGACTCTATATCGCGTATGGGCAGCTTTCATAGTGTTGGTTAGCTTTCGGTACTACCAGGAGTCTCCGGAGAGAGATGTTTGGGTTAAAAATGGAGAAGTAGCTTCAAGAAACAAGACCATGTCGACGAGTTCAAAGCTCAAGAAACAATATTGA

Protein sequence

MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASAGSGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFEEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVIILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPERDVWVKNGEVASRNKTMSTSSKLKKQY*

Homology

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BLAST of Cucsa.132850.2 vs. Swiss-Prot
Match: RTNLS_ARATH (Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-47
Identity = 97/218 (44.50%), Postives = 139/218 (63.76%), Query Frame = 1


Query: 204 FPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVIILSCFIKNINISLISLISHMGLLYLT 263
           F  ++ KLQ+L+DL+MWRD SRS LVFG G  +II S +  ++N S IS++++MGL+YL 
Sbjct: 220 FTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLG 279

Query: 264 TIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMK 323
            +FV  S+  R    +   + + V EED+ R  + ++P++NE L  L+ALF GDPS T+K
Sbjct: 280 LMFVLKSLIHRGMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLK 339

Query: 324 VGVLLFVLAKWGSFITLWNVLKIG----------------------EHWLKLCGSSWKLC 383
           +GV+LFVLA+ GS ITLWN+ K G                        W++    +W+ C
Sbjct: 340 MGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESC 399

Query: 384 SHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQ 400
           +HK+ V +A+F LVWN SS   RVWAAF++LV+FRYYQ
Sbjct: 400 NHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQ 437

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BLAST of Cucsa.132850.2 vs. Swiss-Prot
Match: RTNLQ_ARATH (Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.5e-26
Identity = 68/212 (32.08%), Postives = 111/212 (52.36%), Query Frame = 1


Query: 212 QTLMDLIMWRDFSRSGLVFGVGNLVIILSCFIKNINISLISLISHMGLLYLTTIFVHSSI 271
           + + DL+MWRD ++S L FG G L  + SCF K +N S+ S +S++GL+ L   F+ +++
Sbjct: 166 EIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTL 225

Query: 272 FGRRKRIDSNDENLVVEEEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVL 331
             R+   +       V E+D++R A+R++P  N  +     LF G+PS T+KV   L + 
Sbjct: 226 CQRKN--EDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLG 285

Query: 332 AKWGSFITLWNVLKIG----------------------EHWLKLCGSSWKLCSHKRGVFI 391
           A++G  ITLW +   G                      E      G +W +CSHK+ +  
Sbjct: 286 AEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAG 345

Query: 392 AIFFLVWNFSSTLYRVWAAFIVLVSFRYYQES 402
           +     WN +S   R++A FI+LV FRY +++
Sbjct: 346 SAVTAFWNLTSIRTRIFAVFIILVIFRYRRQN 375

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BLAST of Cucsa.132850.2 vs. Swiss-Prot
Match: RTNLR_ARATH (Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 3.3e-26
Identity = 91/363 (25.07%), Postives = 168/363 (46.28%), Query Frame = 1


Query: 82  SSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIERNSTRKKTDQSRKSAVGLTKPP 141
           SSP +  E    SP+P R+ R+  S    ++ +   +    ++ K  Q            
Sbjct: 60  SSPVTLREILLLSPSPLRKSRTRLSNRFDMEAAEAAVTARRSKTKGGQ------------ 119

Query: 142 TNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFEEEIEKESFDVKEINLPERKK--- 201
            NG+  + S ++F+ S    E ++ +  + +      +E ++     K++   +++K   
Sbjct: 120 -NGLLASPSPRNFRRSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSS 179

Query: 202 --IIAQTFPGNKQKL-----------QTLMDLIMWRDFSRSGLVFGVGNLVIILSCF-IK 261
             ++A   P + Q             + + DLIMWRD ++S L FG G +  + +CF  K
Sbjct: 180 VPLLASPSPSSDQPQDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAK 239

Query: 262 NINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLVPFVN 321
             N S+ S IS++GLL+L   F+ +++  R++  +     L + E+D++R A+R++P  N
Sbjct: 240 GFNFSVFSAISYLGLLFLGVSFLSNTL--RQRVTEEARRELKLSEDDVLRIARRMLPITN 299

Query: 322 ELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGEHW------LKLCGSS- 381
             +     LF G+P+ T+KV   + + A++G  ITLW +   G         L  C +S 
Sbjct: 300 LAISKTSELFSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQ 359

Query: 382 ---------------WKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESP 406
                          W +C+HK+ V  +     WN +S   R  A FI++V  RY +++ 
Sbjct: 360 LNQKVECAQRRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNL 407

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BLAST of Cucsa.132850.2 vs. Swiss-Prot
Match: RTN4_MOUSE (Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 5.0e-06
Identity = 66/303 (21.78%), Postives = 124/303 (40.92%), Query Frame = 1


Query: 58   SGRRKTWKSDEGFN---PILIAEEKPESSPSSGD--------EQSRKSPTPSRRLRSNSS 117
            S +    K  E F+   PI I +E P    +  D        E S KS   + +  +NS 
Sbjct: 823  SSKEDKMKESETFSDSSPIEIIDEFPTFVSAKDDSPKEYTDLEVSNKSEIANVQSGANSL 882

Query: 118  P--NKPVQVSGEKIERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKV 177
            P    P  +S +          +D+  KS   ++K P      ++ E   +  N  + KV
Sbjct: 883  PCSELPCDLSFKNTYPKDEAHVSDEFSKSRSSVSKVPLLLPNVSALESQIEMGNIVKPKV 942

Query: 178  ISSSTSQDFFDAFEEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFS 237
            ++    +        + EKE   +  +   E  K              +++DL+ WRD  
Sbjct: 943  LTKEAEEKL----PSDTEKEDRSLTAVLSAELNKT-------------SVVDLLYWRDIK 1002

Query: 238  RSGLVFGVGNLVIILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDE- 297
            ++G+VFG  +L ++LS  +     S++S+ +++ L  L+         G  + I  +DE 
Sbjct: 1003 KTGVVFG-ASLFLLLSLTV----FSIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEG 1062

Query: 298  ---------NLVVEEEDMIRFAKRLVPFVNELLQNLKALFRGDPSA-TMKVGVLLFVLAK 337
                      + + EE + +++   +  VN  ++ L+ LF  D    ++K  VL++V   
Sbjct: 1063 HPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVLMWVFTY 1103

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BLAST of Cucsa.132850.2 vs. TrEMBL
Match: A0A0A0LG57_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_2G009500 PE=4 SV=1)

HSP 1 Score: 845.1 bits (2182), Expect = 3.7e-242
Identity = 430/444 (96.85%), Postives = 430/444 (96.85%), Query Frame = 1


Query: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASAGSGR 60
           MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASAGSGR
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASAGSGR 60

Query: 61  RKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIER 120
           RKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIER
Sbjct: 61  RKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIER 120

Query: 121 NSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFEEE 180
           NSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFEEE
Sbjct: 121 NSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFEEE 180

Query: 181 IEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVIILS 240
           IEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVIILS
Sbjct: 181 IEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVIILS 240

Query: 241 CFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLV 300
           CFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLV
Sbjct: 241 CFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLV 300

Query: 301 PFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKI-------------- 360
           PFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKI              
Sbjct: 301 PFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKLITH 360

Query: 361 GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPERDV 420
           GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPERDV
Sbjct: 361 GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPERDV 420

Query: 421 WVKNGEVASRNKTMSTSSKLKKQY 431
           WVKNGEVASRNKTMSTSSKLKKQY
Sbjct: 421 WVKNGEVASRNKTMSTSSKLKKQY 444

[Close]

BLAST of Cucsa.132850.2 vs. TrEMBL
Match: A0A022R2B2_ERYGU (Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.8e-64
Identity = 181/534 (33.90%), Postives = 270/534 (50.56%), Query Frame = 1


Query: 4   SRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTA---------- 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN +  ++E    TT           
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFN-ETPDLENNNTTTVNNPEIQMDNK 75

Query: 64  -----------ASAG-SGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQSR------- 123
                       S G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S+       
Sbjct: 76  KTENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGD 135

Query: 124 ------KSPTPSRRLRSNSSPNKPVQVSGEKIERNSTRKKTDQSRKSAVGLTKPPTNGIG 183
                 K+P   ++ RS++     +++   K E +    K + +    +   K P  GIG
Sbjct: 136 GVVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAETAVGDGMPADKNPIGGIG 195

Query: 184 KTSS--------EKSFKESNECREKVISSST-------SQDFFDAFEEE-----IEKESF 243
           +  +         +S +E   C EK I+S         S D+ D  E+E     +EK+S 
Sbjct: 196 EKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEKKSL 255

Query: 244 DVKEINLPERK-------------KIIAQTFPG---NKQKLQTLMDLIMWRDFSRSGLVF 303
           D+KEI +  +              K I   F G      KLQ+ +DL+MWRD S+S  VF
Sbjct: 256 DIKEIKVQVQNLKKHSPPPPVNHTKTIPNHFHGVSRTNSKLQSFVDLVMWRDASKSAFVF 315

Query: 304 GVGNLVIILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDEN--LVVE 363
           GVG   I+ S + K++NIS IS+IS++GL+YL  IF+  S+  R     +N +N   VV 
Sbjct: 316 GVGTFAIVSSSYTKDLNISFISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDFVVG 375

Query: 364 EEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKI-- 423
           EE+ I   K  +P++NE L  L+ALF GDPS TMK+ VLLF+LA+ GS IT+W + K+  
Sbjct: 376 EEEAIWAVKLFLPYLNEFLLKLRALFSGDPSTTMKLAVLLFILARCGSSITVWKMAKLGF 435

Query: 424 --------------------GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVW 430
                               G  W++    +W+ CSHK+ V  A+F LVWN SS + R+W
Sbjct: 436 IGVFTVPKICSTYSSQLTAYGTFWIRRFRDAWESCSHKKAVGFALFTLVWNLSSVVARIW 495

[Close]

BLAST of Cucsa.132850.2 vs. TrEMBL
Match: A0A022R660_ERYGU (Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.4e-63
Identity = 182/536 (33.96%), Postives = 271/536 (50.56%), Query Frame = 1


Query: 4   SRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTA---------- 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN +  ++E    TT           
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFN-ETPDLENNNTTTVNNPEIQMDNK 75

Query: 64  -----------ASAG-SGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQSR------- 123
                       S G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S+       
Sbjct: 76  KTENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGD 135

Query: 124 ------KSPTPSRRLRSNSSPNKPVQVSGEKIERNSTRKKTDQSRKSAVGLTKPPTNGIG 183
                 K+P   ++ RS++     +++   K E +    K + +    +   K P  GIG
Sbjct: 136 GVVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAETAVGDGMPADKNPIGGIG 195

Query: 184 KTSS--------EKSFKESNECREKVISSST-------SQDFFDAFEEE-----IEKESF 243
           +  +         +S +E   C EK I+S         S D+ D  E+E     +EK+S 
Sbjct: 196 EKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEKKSL 255

Query: 244 DVKEINLPERK-------------KII--AQTFPG---NKQKLQTLMDLIMWRDFSRSGL 303
           D+KEI +  +              K I  A  F G      KLQ+ +DL+MWRD S+S  
Sbjct: 256 DIKEIKVQVQNLKKHSPPPPVNHTKTIPTADHFHGVSRTNSKLQSFVDLVMWRDASKSAF 315

Query: 304 VFGVGNLVIILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDEN--LV 363
           VFGVG   I+ S + K++NIS IS+IS++GL+YL  IF+  S+  R     +N +N   V
Sbjct: 316 VFGVGTFAIVSSSYTKDLNISFISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDFV 375

Query: 364 VEEEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKI 423
           V EE+ I   K  +P++NE L  L+ALF GDPS TMK+ VLLF+LA+ GS IT+W + K+
Sbjct: 376 VGEEEAIWAVKLFLPYLNEFLLKLRALFSGDPSTTMKLAVLLFILARCGSSITVWKMAKL 435

Query: 424 ----------------------GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYR 430
                                 G  W++    +W+ CSHK+ V  A+F LVWN SS + R
Sbjct: 436 GFIGVFTVPKICSTYSSQLTAYGTFWIRRFRDAWESCSHKKAVGFALFTLVWNLSSVVAR 495

[Close]

BLAST of Cucsa.132850.2 vs. TrEMBL
Match: A0A0A0LTX3_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_1G269900 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.1e-55
Identity = 136/356 (38.20%), Postives = 191/356 (53.65%), Query Frame = 1


Query: 105 SSPNKPVQVSGEKIERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKV 164
           S   K +  S ++IE+     +T   ++  V L       I  T         NE  E+ 
Sbjct: 165 SEIEKGIHGSVKEIEKPQVENET-YCKEFGVCLISTMAGPIKPTQEVSINDNENEANEE- 224

Query: 165 ISSSTSQDFFDAFEEEIEKESFDVKEINLPERKKIIAQ---------------------- 224
               T ++  D  + EIEKESFD+KEINLPE KKI+ +                      
Sbjct: 225 --EETEEEEEDGDDNEIEKESFDIKEINLPEPKKIVNEVKKFHQIYEKPVPHSSKPTYTS 284

Query: 225 ----TFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVIILSCFIKNINISLISLISHMG 284
                F     KLQ+L+DLIMW++ SRS  VFG+G+ VII S +  +INIS IS++S++G
Sbjct: 285 KEYHNFQEKSNKLQSLVDLIMWKEVSRSAFVFGIGSFVIISSSYTNDINISFISVVSYVG 344

Query: 285 LLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLVPFVNELLQNLKALFRGDP 344
           L YL   F++ SI   R  ID  +   VV EE+ I   K L+P++NE L  ++ALF GDP
Sbjct: 345 LFYLAATFLYRSII-YRGAIDMENVRNVVGEEEAIWVLKLLLPYLNEFLLKVRALFCGDP 404

Query: 345 SATMKVGVLLFVLAKWGSFITLWNVLKIG----------------------EHWLKLCGS 404
           + TMK+ VLLF  A+ GS IT+W V K G                      + W++    
Sbjct: 405 ATTMKLAVLLFASARCGSSITVWKVAKWGFFGVFTLPKICSSYSSHLAAYAKFWIRRFRD 464

Query: 405 SWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPERDVWVKNGE 413
           +W+ CSHK+GV +AIF LVWN SS + RVWAAF++ V+FRYYQ+S + + W  +G+
Sbjct: 465 AWESCSHKKGVALAIFVLVWNLSSVVARVWAAFMLFVAFRYYQQSIQTEEWDGDGD 515

[Close]

BLAST of Cucsa.132850.2 vs. TrEMBL
Match: A0A0A0LTX3_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_1G269900 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 5.8e-09
Identity = 69/206 (33.50%), Postives = 96/206 (46.60%), Query Frame = 1


Query: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDD--ENVECGIPTTAASAGS 60
           MD+ RR+  V++  +VV+GSVWESR++ DEV+GGIKVFNG+D   N E  + T + S   
Sbjct: 1   MDVGRRKVGVSSN-SVVSGSVWESRMKMDEVKGGIKVFNGEDGSSNKEGKVVTRSMSKRI 60

Query: 61  GRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNS---SPNKPVQVSG 120
               + KS     PI I + K     +       KSP   R++RS     SPN+  +   
Sbjct: 61  SLEGSEKS-----PIQIGKGKRNCDET-------KSPIQLRKMRSEEIERSPNQLRKSKS 120

Query: 121 EKIERN-----STRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTS 180
           E +ERN       RK   +S K+ V         +G  +   S  E  +C E   +   S
Sbjct: 121 EMVERNEKTPVQLRKVKSESVKTIVDDNAKAIVVVGGKNGGNS--EHLQCPESESNEELS 180

Query: 181 QDFFDAFEEEIEKESF-DVKEINLPE 196
                    EIEK     VKEI  P+
Sbjct: 181 ---------EIEKGIHGSVKEIEKPQ 182

HSP 2 Score: 216.9 bits (551), Expect = 5.0e-53
Identity = 129/358 (36.03%), Postives = 203/358 (56.70%), Query Frame = 1


Query: 66  SDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIERNSTRK 125
           S+E    + +A +K  S    G E++    TP R  ++ S     +  +GE  +  + RK
Sbjct: 113 SNEKSPSLSVAAKKARSDSVEGIEKT----TPGRVKKTRSELCTTIVKAGE-FDSVALRK 172

Query: 126 ----------KTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFF- 185
                     K+D+  +  V + K  T        E+  KE   C+E ++S+ +++D   
Sbjct: 173 VSSLPVPNSEKSDKKTEHVVDVPKEETINENSKIPEE-VKEFGVCQEMIVSAKSNEDEQI 232

Query: 186 ----------DAFEEEIEKESFDVKEINLPERKKI---IAQTFPGNKQKLQTLMDLIMWR 245
                     +  EEE+EK+S DVKE+N+ +  ++   I +      +   +   ++MWR
Sbjct: 233 NDGDHEEDDEEEKEEEVEKKSVDVKEMNVAKENRVGVEIKKLSQFQNRTSPSPSSILMWR 292

Query: 246 DFSRSGLVFGVGNLVIILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSN 305
           D SRS LVFG G  +II S +  ++N S IS++++MGL+YL  +FV  S+  R    +  
Sbjct: 293 DVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLGLMFVLKSLIHRGMVEEER 352

Query: 306 DENLVVEEEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLW 365
            + + V EED+ R  + ++P++NE L  L+ALF GDPS T+K+GV+LFVLA+ GS ITLW
Sbjct: 353 HKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLKMGVVLFVLARCGSSITLW 412

Query: 366 NVLKIGEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQ 400
           N+ K G  W++    +W+ C+HK+ V +A+F LVWN SS   RVWAAF++LV+FRYYQ
Sbjct: 413 NLAKFGNFWMRRFRDAWESCNHKKAVSLALFTLVWNLSSVTARVWAAFMLLVAFRYYQ 464

[Close]

BLAST of Cucsa.132850.2 vs. TAIR10
Match: AT5G58000.1 (AT5G58000.1 Reticulon family protein)

HSP 1 Score: 191.8 bits (486), Expect = 8.7e-49
Identity = 97/218 (44.50%), Postives = 139/218 (63.76%), Query Frame = 1


Query: 204 FPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVIILSCFIKNINISLISLISHMGLLYLT 263
           F  ++ KLQ+L+DL+MWRD SRS LVFG G  +II S +  ++N S IS++++MGL+YL 
Sbjct: 220 FTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLG 279

Query: 264 TIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMK 323
            +FV  S+  R    +   + + V EED+ R  + ++P++NE L  L+ALF GDPS T+K
Sbjct: 280 LMFVLKSLIHRGMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPSTTLK 339

Query: 324 VGVLLFVLAKWGSFITLWNVLKIG----------------------EHWLKLCGSSWKLC 383
           +GV+LFVLA+ GS ITLWN+ K G                        W++    +W+ C
Sbjct: 340 MGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDAWESC 399

Query: 384 SHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQ 400
           +HK+ V +A+F LVWN SS   RVWAAF++LV+FRYYQ
Sbjct: 400 NHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYYQ 437

[Close]

BLAST of Cucsa.132850.2 vs. TAIR10
Match: AT2G20590.1 (AT2G20590.1 Reticulon family protein)

HSP 1 Score: 122.1 bits (305), Expect = 8.4e-28
Identity = 68/212 (32.08%), Postives = 111/212 (52.36%), Query Frame = 1


Query: 212 QTLMDLIMWRDFSRSGLVFGVGNLVIILSCFIKNINISLISLISHMGLLYLTTIFVHSSI 271
           + + DL+MWRD ++S L FG G L  + SCF K +N S+ S +S++GL+ L   F+ +++
Sbjct: 166 EIISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTL 225

Query: 272 FGRRKRIDSNDENLVVEEEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVL 331
             R+   +       V E+D++R A+R++P  N  +     LF G+PS T+KV   L + 
Sbjct: 226 CQRKN--EDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLG 285

Query: 332 AKWGSFITLWNVLKIG----------------------EHWLKLCGSSWKLCSHKRGVFI 391
           A++G  ITLW +   G                      E      G +W +CSHK+ +  
Sbjct: 286 AEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAG 345

Query: 392 AIFFLVWNFSSTLYRVWAAFIVLVSFRYYQES 402
           +     WN +S   R++A FI+LV FRY +++
Sbjct: 346 SAVTAFWNLTSIRTRIFAVFIILVIFRYRRQN 375

[Close]

BLAST of Cucsa.132850.2 vs. TAIR10
Match: AT4G28430.1 (AT4G28430.1 Reticulon family protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-27
Identity = 91/363 (25.07%), Postives = 168/363 (46.28%), Query Frame = 1


Query: 82  SSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIERNSTRKKTDQSRKSAVGLTKPP 141
           SSP +  E    SP+P R+ R+  S    ++ +   +    ++ K  Q            
Sbjct: 60  SSPVTLREILLLSPSPLRKSRTRLSNRFDMEAAEAAVTARRSKTKGGQ------------ 119

Query: 142 TNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFEEEIEKESFDVKEINLPERKK--- 201
            NG+  + S ++F+ S    E ++ +  + +      +E ++     K++   +++K   
Sbjct: 120 -NGLLASPSPRNFRRSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSS 179

Query: 202 --IIAQTFPGNKQKL-----------QTLMDLIMWRDFSRSGLVFGVGNLVIILSCF-IK 261
             ++A   P + Q             + + DLIMWRD ++S L FG G +  + +CF  K
Sbjct: 180 VPLLASPSPSSDQPQDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCICFLSTCFAAK 239

Query: 262 NINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLVPFVN 321
             N S+ S IS++GLL+L   F+ +++  R++  +     L + E+D++R A+R++P  N
Sbjct: 240 GFNFSVFSAISYLGLLFLGVSFLSNTL--RQRVTEEARRELKLSEDDVLRIARRMLPITN 299

Query: 322 ELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGEHW------LKLCGSS- 381
             +     LF G+P+ T+KV   + + A++G  ITLW +   G         L  C +S 
Sbjct: 300 LAISKTSELFSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQ 359

Query: 382 ---------------WKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESP 406
                          W +C+HK+ V  +     WN +S   R  A FI++V  RY +++ 
Sbjct: 360 LNQKVECAQRRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNL 407

[Close]

BLAST of Cucsa.132850.2 vs. NCBI nr
Match: gi|449442977|ref|XP_004139257.1| (PREDICTED: reticulon-like protein B18 [Cucumis sativus])

HSP 1 Score: 845.1 bits (2182), Expect = 5.3e-242
Identity = 430/444 (96.85%), Postives = 430/444 (96.85%), Query Frame = 1


Query: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASAGSGR 60
           MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASAGSGR
Sbjct: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASAGSGR 60

Query: 61  RKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIER 120
           RKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIER
Sbjct: 61  RKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEKIER 120

Query: 121 NSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFEEE 180
           NSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFEEE
Sbjct: 121 NSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAFEEE 180

Query: 181 IEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVIILS 240
           IEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVIILS
Sbjct: 181 IEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVIILS 240

Query: 241 CFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLV 300
           CFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLV
Sbjct: 241 CFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAKRLV 300

Query: 301 PFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKI-------------- 360
           PFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKI              
Sbjct: 301 PFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKLITH 360

Query: 361 GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPERDV 420
           GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPERDV
Sbjct: 361 GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPERDV 420

Query: 421 WVKNGEVASRNKTMSTSSKLKKQY 431
           WVKNGEVASRNKTMSTSSKLKKQY
Sbjct: 421 WVKNGEVASRNKTMSTSSKLKKQY 444

[Close]

BLAST of Cucsa.132850.2 vs. NCBI nr
Match: gi|659070755|ref|XP_008456496.1| (PREDICTED: reticulon-like protein B21 [Cucumis melo])

HSP 1 Score: 810.8 bits (2093), Expect = 1.1e-231
Identity = 412/447 (92.17%), Postives = 419/447 (93.74%), Query Frame = 1


Query: 1   MDLSRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTAASA---G 60
           MDLSRRRAAVAA+GNVVAGSVWESRIRFDEVRGGIKVFNGDDEN ECG+PTTAASA   G
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNSSPNKPVQVSGEK 120
           SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSN SPNKPVQVSGEK
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 IERNSTRKKTDQSRKSAVGLTKPPTNGIGKTSSEKSFKESNECREKVISSSTSQDFFDAF 180
            ERNSTRKKTDQSRKS VGLTKPPTNGIGKTSSEKSFKE NEC+EKVISSSTSQDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVGLTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI 240
           EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI
Sbjct: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI 240

Query: 241 ILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDENLVVEEEDMIRFAK 300
           ILSCFIKNINIS ISLISHMGLLYLT IFVHSSIFGRRKRIDS+DEN VVEEEDMIRFAK
Sbjct: 241 ILSCFIKNINISFISLISHMGLLYLTAIFVHSSIFGRRKRIDSDDENFVVEEEDMIRFAK 300

Query: 301 RLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKI----------- 360
           R VPFVNELLQNLKALFRGD SATMKVGVLLFVLAKWGSFITLWNVLKI           
Sbjct: 301 RSVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKL 360

Query: 361 ---GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPE 420
              GEHWLKLCGSSWKLCSHKRGVF+AIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPE
Sbjct: 361 ITHGEHWLKLCGSSWKLCSHKRGVFVAIFFLVWNFSSTLYRVWAAFIVLVSFRYYQESPE 420

Query: 421 RDVWVKNGEVASRNKTMSTSSKLKKQY 431
           RDVWVKNGEVASRN T+STSSKLK+QY
Sbjct: 421 RDVWVKNGEVASRNNTVSTSSKLKRQY 447

[Close]

BLAST of Cucsa.132850.2 vs. NCBI nr
Match: gi|604328874|gb|EYU34356.1| (hypothetical protein MIMGU_mgv1a004061mg [Erythranthe guttata])

HSP 1 Score: 254.2 bits (648), Expect = 4.0e-64
Identity = 181/534 (33.90%), Postives = 270/534 (50.56%), Query Frame = 1


Query: 4   SRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTA---------- 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN +  ++E    TT           
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFN-ETPDLENNNTTTVNNPEIQMDNK 75

Query: 64  -----------ASAG-SGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQSR------- 123
                       S G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S+       
Sbjct: 76  KTENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGD 135

Query: 124 ------KSPTPSRRLRSNSSPNKPVQVSGEKIERNSTRKKTDQSRKSAVGLTKPPTNGIG 183
                 K+P   ++ RS++     +++   K E +    K + +    +   K P  GIG
Sbjct: 136 GVVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAETAVGDGMPADKNPIGGIG 195

Query: 184 KTSS--------EKSFKESNECREKVISSST-------SQDFFDAFEEE-----IEKESF 243
           +  +         +S +E   C EK I+S         S D+ D  E+E     +EK+S 
Sbjct: 196 EKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEKKSL 255

Query: 244 DVKEINLPERK-------------KIIAQTFPG---NKQKLQTLMDLIMWRDFSRSGLVF 303
           D+KEI +  +              K I   F G      KLQ+ +DL+MWRD S+S  VF
Sbjct: 256 DIKEIKVQVQNLKKHSPPPPVNHTKTIPNHFHGVSRTNSKLQSFVDLVMWRDASKSAFVF 315

Query: 304 GVGNLVIILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDEN--LVVE 363
           GVG   I+ S + K++NIS IS+IS++GL+YL  IF+  S+  R     +N +N   VV 
Sbjct: 316 GVGTFAIVSSSYTKDLNISFISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDFVVG 375

Query: 364 EEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKI-- 423
           EE+ I   K  +P++NE L  L+ALF GDPS TMK+ VLLF+LA+ GS IT+W + K+  
Sbjct: 376 EEEAIWAVKLFLPYLNEFLLKLRALFSGDPSTTMKLAVLLFILARCGSSITVWKMAKLGF 435

Query: 424 --------------------GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVW 430
                               G  W++    +W+ CSHK+ V  A+F LVWN SS + R+W
Sbjct: 436 IGVFTVPKICSTYSSQLTAYGTFWIRRFRDAWESCSHKKAVGFALFTLVWNLSSVVARIW 495

[Close]

BLAST of Cucsa.132850.2 vs. NCBI nr
Match: gi|848881535|ref|XP_012841125.1| (PREDICTED: reticulon-like protein B21 isoform X2 [Erythranthe guttata])

HSP 1 Score: 254.2 bits (648), Expect = 4.0e-64
Identity = 181/534 (33.90%), Postives = 270/534 (50.56%), Query Frame = 1


Query: 4   SRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTA---------- 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN +  ++E    TT           
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFN-ETPDLENNNTTTVNNPEIQMDNK 75

Query: 64  -----------ASAG-SGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQSR------- 123
                       S G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S+       
Sbjct: 76  KTENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGD 135

Query: 124 ------KSPTPSRRLRSNSSPNKPVQVSGEKIERNSTRKKTDQSRKSAVGLTKPPTNGIG 183
                 K+P   ++ RS++     +++   K E +    K + +    +   K P  GIG
Sbjct: 136 GVVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAETAVGDGMPADKNPIGGIG 195

Query: 184 KTSS--------EKSFKESNECREKVISSST-------SQDFFDAFEEE-----IEKESF 243
           +  +         +S +E   C EK I+S         S D+ D  E+E     +EK+S 
Sbjct: 196 EKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEKKSL 255

Query: 244 DVKEINLPERK-------------KIIAQTFPG---NKQKLQTLMDLIMWRDFSRSGLVF 303
           D+KEI +  +              K I   F G      KLQ+ +DL+MWRD S+S  VF
Sbjct: 256 DIKEIKVQVQNLKKHSPPPPVNHTKTIPNHFHGVSRTNSKLQSFVDLVMWRDASKSAFVF 315

Query: 304 GVGNLVIILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDEN--LVVE 363
           GVG   I+ S + K++NIS IS+IS++GL+YL  IF+  S+  R     +N +N   VV 
Sbjct: 316 GVGTFAIVSSSYTKDLNISFISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDFVVG 375

Query: 364 EEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKI-- 423
           EE+ I   K  +P++NE L  L+ALF GDPS TMK+ VLLF+LA+ GS IT+W + K+  
Sbjct: 376 EEEAIWAVKLFLPYLNEFLLKLRALFSGDPSTTMKLAVLLFILARCGSSITVWKMAKLGF 435

Query: 424 --------------------GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYRVW 430
                               G  W++    +W+ CSHK+ V  A+F LVWN SS + R+W
Sbjct: 436 IGVFTVPKICSTYSSQLTAYGTFWIRRFRDAWESCSHKKAVGFALFTLVWNLSSVVARIW 495

[Close]

BLAST of Cucsa.132850.2 vs. NCBI nr
Match: gi|604328873|gb|EYU34355.1| (hypothetical protein MIMGU_mgv1a004061mg [Erythranthe guttata])

HSP 1 Score: 251.1 bits (640), Expect = 3.4e-63
Identity = 182/536 (33.96%), Postives = 271/536 (50.56%), Query Frame = 1


Query: 4   SRRRAAVAAKGNVVAGSVWESRIRFDEVRGGIKVFNGDDENVECGIPTTA---------- 63
           SRRR +        AGSVWE+R++ D+V+GG KVFN +  ++E    TT           
Sbjct: 16  SRRRGSAPK-----AGSVWETRMKLDQVKGGFKVFN-ETPDLENNNTTTVNNPEIQMDNK 75

Query: 64  -----------ASAG-SGRRKTWKSD--EGFNPILIAEEKPESSPSSGDEQSR------- 123
                       S G SG+RKTWKSD  EG +P+ IA ++ +S+ +S DE S+       
Sbjct: 76  KTENARAKQSPTSVGVSGKRKTWKSDNSEG-SPVQIARKRSDSTKNS-DESSKELTFSGD 135

Query: 124 ------KSPTPSRRLRSNSSPNKPVQVSGEKIERNSTRKKTDQSRKSAVGLTKPPTNGIG 183
                 K+P   ++ RS++     +++   K E +    K + +    +   K P  GIG
Sbjct: 136 GVVGIKKTPVLIKKTRSSAE----IELRKVKSEPSDGESKAETAVGDGMPADKNPIGGIG 195

Query: 184 KTSS--------EKSFKESNECREKVISSST-------SQDFFDAFEEE-----IEKESF 243
           +  +         +S +E   C EK I+S         S D+ D  E+E     +EK+S 
Sbjct: 196 EKKTLTLIGVKKSRSDEEFGVCEEKSITSDVGPAKIPPSDDYIDDDEDEDMEIEVEKKSL 255

Query: 244 DVKEINLPERK-------------KII--AQTFPG---NKQKLQTLMDLIMWRDFSRSGL 303
           D+KEI +  +              K I  A  F G      KLQ+ +DL+MWRD S+S  
Sbjct: 256 DIKEIKVQVQNLKKHSPPPPVNHTKTIPTADHFHGVSRTNSKLQSFVDLVMWRDASKSAF 315

Query: 304 VFGVGNLVIILSCFIKNINISLISLISHMGLLYLTTIFVHSSIFGRRKRIDSNDEN--LV 363
           VFGVG   I+ S + K++NIS IS+IS++GL+YL  IF+  S+  R     +N +N   V
Sbjct: 316 VFGVGTFAIVSSSYTKDLNISFISVISYLGLVYLAAIFLFRSLINRGSLEMNNAKNKDFV 375

Query: 364 VEEEDMIRFAKRLVPFVNELLQNLKALFRGDPSATMKVGVLLFVLAKWGSFITLWNVLKI 423
           V EE+ I   K  +P++NE L  L+ALF GDPS TMK+ VLLF+LA+ GS IT+W + K+
Sbjct: 376 VGEEEAIWAVKLFLPYLNEFLLKLRALFSGDPSTTMKLAVLLFILARCGSSITVWKMAKL 435

Query: 424 ----------------------GEHWLKLCGSSWKLCSHKRGVFIAIFFLVWNFSSTLYR 430
                                 G  W++    +W+ CSHK+ V  A+F LVWN SS + R
Sbjct: 436 GFIGVFTVPKICSTYSSQLTAYGTFWIRRFRDAWESCSHKKAVGFALFTLVWNLSSVVAR 495

The following BLAST results are available for this feature:

BLAST of Cucsa.132850.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTNLS_ARATH	1.5e-47	44.50	Reticulon-like protein B21 OS=Arabidopsis thaliana GN=RTNLB21 PE=2 SV=2	[more]
RTNLQ_ARATH	1.5e-26	32.08	Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2 SV=1	[more]
RTNLR_ARATH	3.3e-26	25.07	Reticulon-like protein B18 OS=Arabidopsis thaliana GN=RTNLB18 PE=2 SV=2	[more]
RTN4_MOUSE	5.0e-06	21.78	Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2	[more]

BLAST of Cucsa.132850.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG57_CUCSA	3.7e-242	96.85	Reticulon-like protein OS=Cucumis sativus GN=Csa_2G009500 PE=4 SV=1	[more]
A0A022R2B2_ERYGU	2.8e-64	33.90	Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1	[more]
A0A022R660_ERYGU	2.4e-63	33.96	Reticulon-like protein OS=Erythranthe guttata GN=MIMGU_mgv1a004061mg PE=4 SV=1	[more]
A0A0A0LTX3_CUCSA	4.1e-55	38.20	Reticulon-like protein OS=Cucumis sativus GN=Csa_1G269900 PE=4 SV=1	[more]
A0A0A0LTX3_CUCSA	5.8e-09	33.50	Reticulon-like protein OS=Cucumis sativus GN=Csa_1G269900 PE=4 SV=1	[more]

BLAST of Cucsa.132850.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58000.1	8.7e-49	44.50	Reticulon family protein	[more]
AT2G20590.1	8.4e-28	32.08	Reticulon family protein	[more]
AT4G28430.1	1.9e-27	25.07	Reticulon family protein	[more]

BLAST of Cucsa.132850.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442977\|ref\|XP_004139257.1\|	5.3e-242	96.85	PREDICTED: reticulon-like protein B18 [Cucumis sativus]	[more]
gi\|659070755\|ref\|XP_008456496.1\|	1.1e-231	92.17	PREDICTED: reticulon-like protein B21 [Cucumis melo]	[more]
gi\|604328874\|gb\|EYU34356.1\|	4.0e-64	33.90	hypothetical protein MIMGU_mgv1a004061mg [Erythranthe guttata]	[more]
gi\|848881535\|ref\|XP_012841125.1\|	4.0e-64	33.90	PREDICTED: reticulon-like protein B21 isoform X2 [Erythranthe guttata]	[more]
gi\|604328873\|gb\|EYU34355.1\|	3.4e-63	33.96	hypothetical protein MIMGU_mgv1a004061mg [Erythranthe guttata]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003388	Reticulon

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.132850	Cucsa.132850	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.132850.2	Cucsa.132850.2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.132850.2.CDS.7	Cucsa.132850.2.CDS.7	CDS
Cucsa.132850.2.CDS.6	Cucsa.132850.2.CDS.6	CDS
Cucsa.132850.2.CDS.5	Cucsa.132850.2.CDS.5	CDS
Cucsa.132850.2.CDS.4	Cucsa.132850.2.CDS.4	CDS
Cucsa.132850.2.CDS.3	Cucsa.132850.2.CDS.3	CDS
Cucsa.132850.2.CDS.2	Cucsa.132850.2.CDS.2	CDS
Cucsa.132850.2.CDS.1	Cucsa.132850.2.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.132850.2.three_prime_UTR.1	Cucsa.132850.2.three_prime_UTR.1	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.132850.2.five_prime_UTR.1	Cucsa.132850.2.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 215..347 score: 7.1
IPR003388	Reticulon	PROFILE	PS50845	RETICULON	coord: 214..347 score: 12
None	No IPR available	PANTHER	PTHR10994	RETICULON	coord: 147..409 score: 4.4
None	No IPR available	PANTHER	PTHR10994:SF84	RETICULON-LIKE PROTEIN B21	coord: 147..409 score: 4.4