Cucsa.127540.3 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAGGTGTAATTTAAATATAAATAAATAAACCCTTCAGCCTCCAACGCAGCTTTCCGGGAAAAAAAATCCTTCTCCGACTTCGGCCATAGTTCAGAAACTGGCTTTGGTTGTGGCCGGAAATTTTGGAGAAGCACTACCTAATCTTCTCAAAGTCGTCGCCGGAACTGCCACCATGGAGGCTCCAGTTAGAGCATTTCGCCCCTGCGTTCTTAATCGCGGTCTCTTCTCAAAAACAATTCCTCAATCTCGCCTCGTTTCATCTCCTGAATCCTATCGGAGCGCGATTTTCCGGCAATCTTCAACCTATTTCCACTTTTCTCCTTCTCGCAAAAACCTCGGTTCCAAAATTTCACTCTCACTTAATCTTTCTCACTGCTGCTCCTCTTCCTTTGGATCTTCCGCATCTTCTCTTGGCTCCATCCCTTCTAATTTTCTTTATTCTTTACCCTCATTACAGTCTTTCGGCTCTCAATTTGCGTCTGATTACTTCAGTTCATTTCTATTCGACTCAAACGGAAGTGACTGGACTTGGAATCGAGCTTCAGAGAGTGCAATTGGAAACAACGTAGGAGTTTTGCGGGGCGAAAAGGGGGCGGCGACCGTTGTTTTGTTAGGTTGGCTTGGGGCAAAGACTAAGCATCTGAGGAGGTATGTGGAGTGGTACAATGCGAGGGGTATCAACGCATTGACGTTTATTGTAGATCCGAGAGAGTTTCTTTGGTTCGCTTTGAGTCGGAAAGTTGAGCAGCGGATCTCGGATTTGGCGGTTGAACTCATTTCTTGGTTATCGGAAGGGGAAGAGAGTGATAAAGATCGATCCCTGATTTTTCATACTTTTAGCAACACGGGCTGGTTTGTGTATGTTGAATTTTGTTATCGGTATCTTATTTCAGTTGTTCTTTGTGATTTTAACACAGAATTAGCTTTGTTTCATTTTCTTGTTTCCTGCAGATATGGAGCCATTCTTGAAATCTTGCAAGGGCGGAAAGATTTGTTGGAGAAGATTAAAGGGTGCATCGTTGATTCTGGAGGAGGTGATCCGTTGAATCCGCAGGTTTGTGAAATTATAGTTGTAGAAGAATCTTGGAACCGTGCTTCAACAATGATATGAAAATCAGTTCTAAACTATTATCTGCTTTCTTTTAACTGTTGGAAAAACATCTGCAAGTTAACGAACTCCTATTCATCTTTGAAGTTTGCATCGTAATGTAGGATTTAGAGGTGGAAGTCTAGTAGGAACTGGCTATTGCCCTTCAAATATCATTTGATCTCAACCTCAATCTTCCTTTTGGTGTATCTCCTTATCTCTCTGTTCCTTCTTTCCTAGTTCTAAAGGCCTGTTGGTAATGATTGAATCTGGAAGTGTTCTTGATTATATGATCATTTACCCAAGATTTCATGAAAATTTCCAACTCCCATTTTTTACTTGGGCTTCTAAATAGTTTCAAAATCAGAAATTTTGGTTTTAACTTTTTTTTTTTTTTTGTCATGAACTATTGAACCATATGCAAACAGTTAGAACTAGTTAGGTTGTTTAAGCATTGAGACAATAATATAATAATAGCTAGCAGACACTTATCCATTCTGAATTAGATGGTGTGTTTCATCCAATATATTTTACTTTCCATTTTATTCTCATTCATAATAGAAGAGATATGATTCCATCTCTACTACAAACAATGGCAGGTTTGGGCAGCTGGATTTTCTGCAGCCATTCTCAAGAAAAATAGTTCTTCTGCATCTCCAATGGTAAATGGAGAGGAAATAGACAAGAAACCTCTTTTGTTGGAAACAATTTTCCTATCATCATTGGAGAAGTTCTTCTCTGTTGCTTTGAAGTTGCCAGATGTTGATAAGTAAGCTTTCTAATTCTGATTATATCCAGACATGGATACATATTCGCTTGAGGATCGAATGATTGAATGGGCATGCACATGTCATATGGTTGCATTTTTTTATATCTGTGAGTGCTTCGGTCAGCTTATACACACCTCGAATAATGTCACTTTCTTCTATCTTGTAATAGTTGCATATTGATTATTGAGAAATTAACATTTCCTTGCAGGAGATTGAACAACATTGTTTCAGTTCTTACAGAGAACCAACCTCCATATCCTGAGCTTTATCTGTACAGTTCAGGAGATAAAGTTGTACCTTACACGTCAATCGAGCTACTGATCAAGAAGAGGATGATGACAGGAAGGAAGGTTTTTTCGTACAACTTCGGCACGTCACCACATGTTGACCATTACAGGACGTACCCTGATATATACTCATTACAGCTTCACAAGTTCTTGATAGAATCTTTTTCTTCATAGGCTGTTGAAGATATGGATTTAGAAGGAAGTGAGATAATTTCATTAGAGCAATAACTGGATTGGCTAAAAAGTTTCATATGCAGAGATAGAGATATAGATTTCAGACACAGTTGAGAGACAATTGAAATAGGGTGAAGAGAAACCAAAAC CCAAAGGTGtaatttaaatataaataaataaaCCCTTCAGCCTCCAACGCAGCTTTCCGGGAAAAAAAATCCTTCTCCGACTTCGGCCATAGTTCAGAAACTGGCTTTGGTTGTGGCCGGAAATTTTGGAGAAGCACTACCTAATCTTCTCAAAGTCGTCGCCGGAACTGCCACCATGGAGGCTCCAGTTAGAGCATTTCGCCCCTGCGTTCTTAATCGCGGTCTCTTCTCAAAAACAATTCCTCAATCTCGCCTCGTTTCATCTCCTGAATCCTATCGGAGCGCGATTTTCCGGCAATCTTCAACCTATTTCCACTTTTCTCCTTCTCGCAAAAACCTCGGTTCCAAAATTTCACTCTCACTTAATCTTTCTCACTGCTGCTCCTCTTCCTTTGGATCTTCCGCATCTTCTCTTGGCTCCATCCCTTCTAATTTTCTTTATTCTTTACCCTCATTACAGTCTTTCGGCTCTCAATTTGCGTCTGATTACTTCAGTTCATTTCTATTCGACTCAAACGGAAGTGACTGGACTTGGAATCGAGCTTCAGAGAGTGCAATTGGAAACAACGTAGGAGTTTTGCGGGGCGAAAAGGGGGCGGCGACCGTTGTTTTGTTAGGTTGGCTTGGGGCAAAGACTAAGCATCTGAGGAGGTATGTGGAGTGGTACAATGCGAGGGGTATCAACGCATTGACGTTTATTGTAGATCCGAGAGAGTTTCTTTGGTTCGCTTTGAGTCGGAAAGTTGAGCAGCGGATCTCGGATTTGGCGGTTGAACTCATTTCTTGGTTATCGGAAGGGGAAGAGAGTGATAAAGATCGATCCCTGATTTTTCATACTTTTAGCAACACGGGCTGGTTTGTATATGGAGCCATTCTTGAAATCTTGCAAGGGCGGAAAGATTTGTTGGAGAAGATTAAAGGGTGCATCGTTGATTCTGGAGGAGGTGATCCGTTGAATCCGCAGGTTTGGGCAGCTGGATTTTCTGCAGCCATTCTCAAGAAAAATAGTTCTTCTGCATCTCCAATGGTAAATGGAGAGGAAATAGACAAGAAACCTCTTTTGTTGGAAACAATTTTCCTATCATCATTGGAGAAGTTCTTCTCTGTTGCTTTGAAGTTGCCAGATGTTGATAAGTAAGCTTTCTAATTCTGATTATATCCAGACATGGATACATATTCGCTTGAGGATCGAATGATTGAATGGGCATGCACATGTCATATGGTTGCATTTTTTTATATCTGTGAGTGCTTCGGTCAGCTTATACACACCTCGAATAATGTCACTTTCTTCTATCTTGTAATAGTTGCATATTGATTATTGAGAAATTAACATTTCCTTGCAGGAGATTGAACAACATTGTTTCAGTTCTTACAGAGAACCAACCTCCATATCCTGAGCTTTATCTGTACAGTTCAGGAGATAAAGTTGTACCTTACACGTCAATCGAGCTACTGATCAAGAAGAGGATGATGACAGGAAGGAAGGTTTTTTCGTACAACTTCGGCACGTCACCACATGTTGACCATTACAGGACGTACCCTGATATATACTCATTACAGCTTCACAAGTTCTTGATAGAATCTTTTTCTTCATAGGCTGTTGAAGATATGGATTTAGAAGGAAGTGAGATAATTTCATTAGAGCAATAACTGGATTGGCTAAAAAGTTTCATATGCAGAGATAGAGATATAGATTTCAGACACAGTTGAGAGACAATTGAAATAGGGTGAAGAGAAACCAAAAC ATGGAGGCTCCAGTTAGAGCATTTCGCCCCTGCGTTCTTAATCGCGGTCTCTTCTCAAAAACAATTCCTCAATCTCGCCTCGTTTCATCTCCTGAATCCTATCGGAGCGCGATTTTCCGGCAATCTTCAACCTATTTCCACTTTTCTCCTTCTCGCAAAAACCTCGGTTCCAAAATTTCACTCTCACTTAATCTTTCTCACTGCTGCTCCTCTTCCTTTGGATCTTCCGCATCTTCTCTTGGCTCCATCCCTTCTAATTTTCTTTATTCTTTACCCTCATTACAGTCTTTCGGCTCTCAATTTGCGTCTGATTACTTCAGTTCATTTCTATTCGACTCAAACGGAAGTGACTGGACTTGGAATCGAGCTTCAGAGAGTGCAATTGGAAACAACGTAGGAGTTTTGCGGGGCGAAAAGGGGGCGGCGACCGTTGTTTTGTTAGGTTGGCTTGGGGCAAAGACTAAGCATCTGAGGAGGTATGTGGAGTGGTACAATGCGAGGGGTATCAACGCATTGACGTTTATTGTAGATCCGAGAGAGTTTCTTTGGTTCGCTTTGAGTCGGAAAGTTGAGCAGCGGATCTCGGATTTGGCGGTTGAACTCATTTCTTGGTTATCGGAAGGGGAAGAGAGTGATAAAGATCGATCCCTGATTTTTCATACTTTTAGCAACACGGGCTGGTTTGTATATGGAGCCATTCTTGAAATCTTGCAAGGGCGGAAAGATTTGTTGGAGAAGATTAAAGGGTGCATCGTTGATTCTGGAGGAGGTGATCCGTTGAATCCGCAGGTTTGGGCAGCTGGATTTTCTGCAGCCATTCTCAAGAAAAATAGTTCTTCTGCATCTCCAATGGTAAATGGAGAGGAAATAGACAAGAAACCTCTTTTGTTGGAAACAATTTTCCTATCATCATTGGAGAAGTTCTTCTCTGTTGCTTTGAAGTTGCCAGATGTTGATAAGTAA MEAPVRAFRPCVLNRGLFSKTIPQSRLVSSPESYRSAIFRQSSTYFHFSPSRKNLGSKISLSLNLSHCCSSSFGSSASSLGSIPSNFLYSLPSLQSFGSQFASDYFSSFLFDSNGSDWTWNRASESAIGNNVGVLRGEKGAATVVLLGWLGAKTKHLRRYVEWYNARGINALTFIVDPREFLWFALSRKVEQRISDLAVELISWLSEGEESDKDRSLIFHTFSNTGWFVYGAILEILQGRKDLLEKIKGCIVDSGGGDPLNPQVWAAGFSAAILKKNSSSASPMVNGEEIDKKPLLLETIFLSSLEKFFSVALKLPDVDK*
BLAST of Cucsa.127540.3 vs. Swiss-Prot
Match: TMM53_HUMAN (Transmembrane protein 53 OS=Homo sapiens GN=TMEM53 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08 Identity = 48/147 (32.65%), Postives = 75/147 (51.02%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. Swiss-Prot
Match: TMM53_BOVIN (Transmembrane protein 53 OS=Bos taurus GN=TMEM53 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.8e-07 Identity = 42/128 (32.81%), Postives = 66/128 (51.56%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. Swiss-Prot
Match: TMM53_MOUSE (Transmembrane protein 53 OS=Mus musculus GN=Tmem53 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.5e-07 Identity = 41/130 (31.54%), Postives = 64/130 (49.23%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. Swiss-Prot
Match: TMM53_DANRE (Transmembrane protein 53 OS=Danio rerio GN=tmem53 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.8e-07 Identity = 38/123 (30.89%), Postives = 64/123 (52.03%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. TrEMBL
Match: A0A0A0KGH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G502770 PE=4 SV=1) HSP 1 Score: 638.6 bits (1646), Expect = 3.9e-180 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. TrEMBL
Match: M5W995_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006582mg PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 3.3e-78 Identity = 173/334 (51.80%), Postives = 214/334 (64.07%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. TrEMBL
Match: W9RLR0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014602 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.7e-69 Identity = 166/341 (48.68%), Postives = 205/341 (60.12%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. TrEMBL
Match: A0A067K690_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14963 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 8.2e-69 Identity = 159/336 (47.32%), Postives = 207/336 (61.61%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. TrEMBL
Match: F6GWV4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g02000 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 5.9e-67 Identity = 161/340 (47.35%), Postives = 202/340 (59.41%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. TAIR10
Match: AT2G18245.1 (AT2G18245.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 230.7 bits (587), Expect = 1.3e-60 Identity = 127/264 (48.11%), Postives = 173/264 (65.53%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. TAIR10
Match: AT3G19970.1 (AT3G19970.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 162.2 bits (409), Expect = 5.5e-40 Identity = 100/260 (38.46%), Postives = 142/260 (54.62%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. NCBI nr
Match: gi|778719474|ref|XP_011658015.1| (PREDICTED: transmembrane protein 53 [Cucumis sativus]) HSP 1 Score: 638.6 bits (1646), Expect = 5.7e-180 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. NCBI nr
Match: gi|659080312|ref|XP_008440723.1| (PREDICTED: transmembrane protein 53 [Cucumis melo]) HSP 1 Score: 607.8 bits (1566), Expect = 1.1e-170 Identity = 306/320 (95.62%), Postives = 310/320 (96.88%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. NCBI nr
Match: gi|595804564|ref|XP_007202176.1| (hypothetical protein PRUPE_ppa006582mg [Prunus persica]) HSP 1 Score: 300.1 bits (767), Expect = 4.8e-78 Identity = 173/334 (51.80%), Postives = 214/334 (64.07%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. NCBI nr
Match: gi|645273071|ref|XP_008241701.1| (PREDICTED: transmembrane protein 53 isoform X1 [Prunus mume]) HSP 1 Score: 299.3 bits (765), Expect = 8.1e-78 Identity = 172/334 (51.50%), Postives = 214/334 (64.07%), Query Frame = 1
BLAST of Cucsa.127540.3 vs. NCBI nr
Match: gi|657948541|ref|XP_008338275.1| (PREDICTED: transmembrane protein 53 [Malus domestica]) HSP 1 Score: 287.0 bits (733), Expect = 4.2e-74 Identity = 171/333 (51.35%), Postives = 204/333 (61.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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