Cucsa.121090.7 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.121090.7
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Autophagy-related protein 3
Location	scaffold00998 : 3120427 .. 3125836 (+)
Sequence length	1088

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGTTGGGGAGTAAAAGAGTAGTTGTTAAGGGTTATAATAACCCTCATCTCCAATTAAGCAAATTTGTGTGGCAAAACGTAAAATTTCTAGTTAAGAAACTAAATTAAAAAAaGAAAGATTAGTTCTCTACACCTAATCTATAGGGTTTTTAAATATATTTTAGAGGTAAGATTATGTTATATATATATCCCTAACAAAGACTACAATAACACAAAATTTTATTACTACTAATCAAAGACTATATTAAGTATAAGTTTATTACCACTAAGGGGATGCGCACCAAACGGTCCGTTAGATAGTATCGTTACATTAAAAACATTTAAAAGAAACTTTACGTTTCTCCGTTGAAGCCCAAATTTGGGTCATCTCCCCCATTGAAGCCCAATTTCGGTGGTCGATCAGAGTCAAGCTTCTGCTGGGGATTTCAATCTTCTCTTCCAATTTCCAATTTCTCAATTCTTCTCATCTCGATTTATCAATCCCACCCAGATTTGAGATCATGGTTTTATCCCAGAAGCTTCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACCGGACCTCGAACCGTCTCCGCTTTCAAAGAGAAAGGCGTTCTCAGTGTTTCTGAGTTCGTCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGGTATTTTCTTCTCCATTTCCATCGTCTTGTTTTCTTTATTCGTTATAATTCTTGGATATTTTAATTTCGTATTATTCAACTGCTGAATTGAACGATTATCTTTATTATTAGATTCGGTATATCAATTTTCTTTTGTGAATCTTGTCATTTTTGTTAATTCTGTTTTCAAGATAGTGGATGGAGGTCGTTTATGGTTGTTCAAAGGACATTGTGGTCAGTTGGTCTGTGTCGAACTGAAAGCCTTCCAAATTTTCAATGTAGACGTTGTTGAAGGAATATAGTTAACTCCCTTTTAGTGGATGGTAGAGCTTTGGAGTGGTTGAGAAAAATCCTTAATGCCATTTCGGTCAGAAGTTCTTCAGAAACTTAAATGGAGAGTGGTTAAATAGTGATATCCCATTGGTTTTTCATATTCTTCTGAAACTATGTTTATAGCCTTCTTTGAGAAGCAAGTTGGTTATTCGTTTTCGAAGTATAAAATTTAGTGGAACGAAATTAGAGTAGAAATCATAGTTTGTGTTTTCCAACTTACTTTTAGGCTCTTCGTGGTTGGACGGACAGTCGTAAGTCATAACGCATATGTTGGTTACTTCCCATCCTATTTCTTTTTCAGGCAAAGGACAATGTGGGTCTTTCCACAATCCCATGAAAACTGACGTTATTAGTGGCTCACTTGTTCAGTTATACTTTTTATGTTCTCACCTCCTCTATTCGTTTAACTCCTTAAGTTCTGGAAGTGTTTTAAAATTTGTCTATTATGTGTTAAAATATCTTTTCCTTGTTCATGATTTTAGGGAGTCGGGTGATCTGAACAAGAGGAAATCATATCTGCCCCCAGATAAGCAATTCTTGATTACCAGAAATGGTATAACAGCACAACCCTTAACTTCATTGTTTTGTATCTCTAAGCATTATTCTCGTTTCATTGCCTTAATGAAAAGTCTCGTATCCTTTTCAAAAAAAaaTTCAATAAGAATTAAATGAATTTTTGCGTAATAATCTTCAAACTTGAGCTTTGTTGAGCCATTATAACAATTAAGGTAATAGTTCACTTTCTTTCCAGTTCCTTGCCTGCGACGGGCTGCCTCTGTTGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACCCATGGGAAACCAAAGGGTACCTTTATCTATGAGTTTGAAGCTAGGGATTTACATTAGGTAAATAACATGTGCTCTTTCATGCAGAAGAAAAAAGAGACGAAGAGGAAAATTTGCCTTCCTTGGAAACTCTTGAAATCAGCAGGACCAAGGTTGTTAAGTCGATTCCAAACTATTTTGGTGGTGAAGATGAAGATGATGTTCCTGACCTGGATGATATCGAAGAAACTGACAATGTTGTTGGAACTGATCCAGTATGTAAATTAAATTTTATGAGCAAATTGTGGCTTAAGAATATTCCTTTTACTAAAGGGCCTGCATAATCACTGCCCACCCTCATCCGCCCCAAAATTAACAGGAGTTTCAGCTATATCTATGTTTTGCAAGTTTGAGCTTTAATCCATGCTCTCTTAATTTGCTAGGCATAGAATGTGGAGAATAATCTGGATTTTTtCTGTGGTATCTGATCTTGAAAAAACTTTCTTGGTTTCCACAGAGAAAGCTTTTGGTTCTTTTTTtCTTTTATCATATACACTAACAACCATTTGGAATTAGAAAAATATTTATCCTCACATCCTGCGGCAGTTATTTTTTGATGAGAGATTCATGTTCGCATTTACTACTTCATTGTAGGCCACCCTGCCATTGACCTACCAAATTGCCCACGAACCTGATGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTAAGGAGATTTCTCTTGTTGTTCTTTTCGCTGTTTTTTtACTTATGAAGAATCGTATGTAATGTGTTGAATAAAAATGGATCGAAATTCATGAGTTAGGAGGAAAGAATCCTTCTATTTAGCAAACAAAAACTAGATGCAATTGAATAAATATCACTTGTAATGCAATTCGAGATATCCCACAAAAATTTTCCCTTCTATGAAATCCTCCACTTTTTTGACTCCAAATCTCCAAGTACTGCAAAGAATGGATTTAGGGGTAGAGTCATAAAATATTTGCATCAGATACCCCAAATGCAGGTTACTTTCTAGTTGTTTTTCATAGTTTTTCAGGAGAAAAGATAGTTATCATTAGGAACTTTTGGTAATTATTATTAGGTTCATTATTTTGAGCATTGGTGCAATACTTGGAGAATGAAGCCCTTGCCATTTTTCTTGAGTAGAAAATGAGGAAGTGTGGATTTATGGTTTAGAATTGAACTGCAGCCTATTCCATTGTTTTTTGTTCTTCCTTATCAATTTTGTGGTTATCTTATAACTGGTCATTAGTTACAACTTTTAAGGGTTTAGGCATATAGGTAAATGTTTCTGGTTTTAAACATTGTGGTCGTGAATTAAATCTTCAAAATTCACTACCACATTGGTACAACTGGTAGTGGTAGTGATCTTGGCTACAACCAGTGTTCCTGACTCTTAAGTCCTTTTGGTGAATCTCATTTAAAACCTACTTGATCTCAAGGACTCTGGGAAATATTGTTATTAATGAAGTTTTAGCTTTCCATGAGACATTTTCCTGTTGATTATTGTAGGTCAATTAAGTTTTATCAATGGTATATGTACATGAAATAACTATTAAACAAGGGAATATCCAGAGAAAAAGAATATACGAAAAATATCTTTGCAATAGTTAATCCTATGATACACCATGTATCTTTGTGAGGAAATTGTATCATGTCATGTTTGACCTAAAATAAGGAAGTTTGTTTATGTTCTATAATAATGCTTTTCCAGATTTCAAAAGTAGATAGTTGACTACAAGTTTGACAATGATGCTATTCTTTTCTAATATCAGGTATGATAAATATTATCAGACACCACGTGTTTGGCTTACAGGATATGATGAGGTTTGTATGTTTATGTGTATATGTATTTAAATGTGATTAACTGATAACAAAATGTTAATTATAATATTTTAATTTTCACACTACACATCTTGTTAGTGGGTTGTATAGGTAGAATATTGTGTGATATTATAACTTTGAAAAAGATCTAGACAACGAATGCAATGGAGTGAAATTGATTTTTTAGTTCTTCATTGGTGAATGGTAATTGGTGTGAATATAAAGAGGATTCAACGAGTGGCAGTTGTTTATCATCACTTTTCTATGTACTTCTCTGTAATGTATTTGTCTTTCTAGTTCAAATGCATATTGCCCATTGAAATTTCTTCTTATTTCTTGATTAGTTATCCCTCAATAGTTCATGGTTTATGTTTGATTACTGCTTAATAATGCTGTTTCATAAATTATCTTTTCTTTTCAAAGCTACAGAAAATACGGCACTAACTCTGCATGCTCACACTGACACCAACACTGCTTTCTATTGTGATAAAAGTTTTTtTTtCCACAATAGAATACAAATTTTTTACATGGACAACAATTTGTTATCTGATGCTTTAATTTGCAAGTTCTTTTAATGCTTTCTTACCCAATTTCTTTTAGCACATACATATTTGAATCATTGTGAACTATGACAGTCAAGGATGCTCTTACAGCCGGAACTTGTGCTTGAAGATGTTAGTCAAGATCATGCTCGAAAAACAGTAAGTTGTGAATATGTAATAATGTAGTTCTGCCATCTATATGAGGCCCAATTATTTGTTCTATATTATTTTCAGTTGATCTGTATGCTTAGGATTGACTTCTTCTTGTACCTTTTGCTATGCCACACTACTCAAAGAAAAGAGGAAAAAGAATATTAATAATCGAGAATTAGCTCTTACATCTAAATTCGAGACTTTATAAAATTTGAGAACTTGAACACAACAAATACACAAAGAAGAAAGAAAGAAAGAAGTAAAAACTTCTTAGTTAGCTAGTAACCTTTGCCTTTGCCTCCTTTATTCTGCAGCAGCTAAAAATCCAGATTTACAATGACAGTAATATCATATCCAGAAATGAAGGCTTGGCAATGAAAACATAATATTTTGATTAAACTTCTCAGGTGGAGCGAGACTTTGAAAGAATATTGACACCCAATGCACAACCTGGAACCAAAATATGGTTGGGTTCAGTTATGTCCATCAACTGAATTGTTGTTCTAAGTTCAAGTTCTCAGATAGTATGGATTATGGACTTCGATCCTTGTGGATGCGACAATACATAATTTTACACCTAGATAAGAGGCCCTATTTGGATTGACTTAAGAAAAAGATTGTCTAAAATACACTTCAAAAACTATTTTGAGTGGAAGGTGACTTATTTTTTAAATTAAAGACCTGAATGTATTCCAAACAAAACCAAGATTACCAACAAGAATCTGTTTTTGCTTTTGTATGCTGAACCAGTATGGGGGAGTCTGGAGAACCCATACATTTGTTTCATTGTCTACGAATGTCCTTACCAGTGTCATGTGGAACATGAATTTCCAAATACATTCTAAATTCAATATTTGGGATACAGGTGACCATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACACGGGGCTGTGATGAAAAAGATCATCGATGTGTTAATGTCCCGAGGTGTAGAACCTGAAGTTCACAAGTAATTATTTCAGTCTCTATTTAAAACAACAGATCTCCCTACAAGTTTGCACTT

mRNA sequence

ATGGATGAGTTGGGGAGTAAAAGAGTAGTTGTTAAGGCCCAAATTTGGGTCATCTCCCCCATTGAAGCCCAATTTCGGTGGTCGATCAGAGTCAAGCTTCTGCTGGGGATTTCAATCTTCTCTTCCAATTTCCAATTTCTCAATTCTTCTCATCTCGATTTATCAATCCCACCCAGATTTGAGATCATGGTTTTATCCCAGAAGCTTCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACCGGACCTCGAACCGTCTCCGCTTTCAAAGAGAAAGGCGTTCTCAGTGTTTCTGAGTTCGTCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGGGAGTCGGGTGATCTGAACAAGAGGAAATCATATCTGCCCCCAGATAAGCAATTCTTGATTACCAGAAATGTTCCTTGCCTGCGACGGGCTGCCTCTGTTGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACCCATGGGAAACCAAAGGAAGAAAAAAGAGACGAAGAGGAAAATTTGCCTTCCTTGGAAACTCTTGAAATCAGCAGGACCAAGGTTGTTAAGTCGATTCCAAACTATTTTGGTGGTGAAGATGAAGATGATGTTCCTGACCTGGATGATATCGAAGAAACTGACAATGTTGTTGGAACTGATCCAGCCACCCTGCCATTGACCTACCAAATTGCCCACGAACCTGATGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTATGATAAATATTATCAGACACCACGTGTTTGGCTTACAGGATATGATGAGTCAAGGATGCTCTTACAGCCGGAACTTGTGCTTGAAGATGTTAGTCAAGATCATGCTCGAAAAACAGTGACCATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACACGGGGCTGTGATGAAAAAGATCATCGATGTGTTAATGTCCCGAGGTGTAGAACCTGAAGTTCACAAGTAATTATTTCAGTCTCTATTTAAAACAACAGATCTCCCTACAAGTTTGCACTT

Coding sequence (CDS)

ATGGATGAGTTGGGGAGTAAAAGAGTAGTTGTTAAGGCCCAAATTTGGGTCATCTCCCCCATTGAAGCCCAATTTCGGTGGTCGATCAGAGTCAAGCTTCTGCTGGGGATTTCAATCTTCTCTTCCAATTTCCAATTTCTCAATTCTTCTCATCTCGATTTATCAATCCCACCCAGATTTGAGATCATGGTTTTATCCCAGAAGCTTCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACCGGACCTCGAACCGTCTCCGCTTTCAAAGAGAAAGGCGTTCTCAGTGTTTCTGAGTTCGTCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGGGAGTCGGGTGATCTGAACAAGAGGAAATCATATCTGCCCCCAGATAAGCAATTCTTGATTACCAGAAATGTTCCTTGCCTGCGACGGGCTGCCTCTGTTGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACCCATGGGAAACCAAAGGAAGAAAAAAGAGACGAAGAGGAAAATTTGCCTTCCTTGGAAACTCTTGAAATCAGCAGGACCAAGGTTGTTAAGTCGATTCCAAACTATTTTGGTGGTGAAGATGAAGATGATGTTCCTGACCTGGATGATATCGAAGAAACTGACAATGTTGTTGGAACTGATCCAGCCACCCTGCCATTGACCTACCAAATTGCCCACGAACCTGATGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTATGATAAATATTATCAGACACCACGTGTTTGGCTTACAGGATATGATGAGTCAAGGATGCTCTTACAGCCGGAACTTGTGCTTGAAGATGTTAGTCAAGATCATGCTCGAAAAACAGTGACCATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACACGGGGCTGTGATGAAAAAGATCATCGATGTGTTAATGTCCCGAGGTGTAGAACCTGAAGTTCACAAGTAA

Protein sequence

MDELGSKRVVVKAQIWVISPIEAQFRWSIRVKLLLGISIFSSNFQFLNSSHLDLSIPPRFEIMVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK*

Homology

[Close]

BLAST of Cucsa.121090.7 vs. Swiss-Prot
Match: ATG3_ARATH (Autophagy-related protein 3 OS=Arabidopsis thaliana GN=ATG3 PE=1 SV=2)

HSP 1 Score: 500.0 bits (1286), Expect = 2.1e-140
Identity = 237/283 (83.75%), Postives = 261/283 (92.23%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQKLHEAFKGTVERITGPRT+SAFKEKGVLSVSEFV+AGDNLVSKCPTWSWESGD +
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDAS 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KRK YLP DKQFLITRNVPCLRRAASV E+YEAAGGEVL+D+ED DGWLATHGKPK+ K 
Sbjct: 61  KRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKD-KG 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
            EE+NLPS++ L+I+    ++SIP YFGGE++DD+PD+++ +E DNVV  DPATL  TY 
Sbjct: 121 KEEDNLPSMDALDINEKNTIQSIPTYFGGEEDDDIPDMEEFDEADNVVENDPATLQSTYL 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           +AHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDESRMLLQPELV+EDVSQDHARKT
Sbjct: 181 VAHEPDDDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV K
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDK 282

[Close]

BLAST of Cucsa.121090.7 vs. Swiss-Prot
Match: ATG3_DICDI (Autophagy-related protein 3 OS=Dictyostelium discoideum GN=atg3 PE=3 SV=3)

HSP 1 Score: 256.1 bits (653), Expect = 5.3e-67
Identity = 140/304 (46.05%), Postives = 186/304 (61.18%), Query Frame = 1


Query: 67  QKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKS 126
           Q +H+A+  TVE++T   + S F E+GVL+  EFV AGD L  KC TW+WESGD ++  S
Sbjct: 7   QAVHKAYVKTVEKVTPTLSTSKFLEEGVLTPEEFVQAGDLLTDKCQTWTWESGDPSRNVS 66

Query: 127 YLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDG-DGWLATHGKPKEEK-RDE 186
           YLP +KQFL+TRNVPC  R  ++E E +A+  + +   +DG D W+A      ++   DE
Sbjct: 67  YLPKEKQFLLTRNVPCYNRVRTLENESKASKADEIQIEDDGEDSWVAPQPVGNQDDIEDE 126

Query: 187 EENLPSLE-------TLEISRTKVVKSIPNYFGGEDED---DVPDLDDIEETDNVVGTDP 246
           + ++ SL+       T   +  K   +  N    EDED   D+PDLDD ++ + +   DP
Sbjct: 127 KVDISSLKIDDKKPNTTTTTTAKPTNNNNNNNDDEDEDEDGDIPDLDDFQDDNIIEEEDP 186

Query: 247 ATLP-----LTYQIAHE----------PDDDNILRTRTYDVSITYDKYYQTPRVWLTGYD 306
           A L       T   A+            D+DNILRTRTYD+SITYDKYYQTPRVWL GYD
Sbjct: 187 AVLSKNNKTTTTTTANNNNNNNSENKVEDNDNILRTRTYDISITYDKYYQTPRVWLFGYD 246

Query: 307 ESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGV 344
           E+R  L+PE + ED+S+DHA KTVTI+ HPHL    A +HPCRH AVMKK++D     G 
Sbjct: 247 ENRKPLKPEEIFEDISEDHAHKTVTIDSHPHLGISFAYIHPCRHAAVMKKLVDRQSENGK 306

[Close]

BLAST of Cucsa.121090.7 vs. Swiss-Prot
Match: ATG3_MOUSE (Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus GN=Atg3 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.5e-56
Identity = 124/275 (45.09%), Postives = 167/275 (60.73%), Query Frame = 1


Query: 78  ERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKSYLPPDKQFLIT 137
           E +T     S FKE GV++  EFV AGD+LV  CPTW W +G+  K K+YLP DKQFL+T
Sbjct: 17  EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTDKQFLVT 76

Query: 138 RNVPCLRRAASVEEEYEAAGGEVLLDNEDGDG-WLATHGKPKEEKRDEEENLPSLETLEI 197
           +NVPC +R   +E   E    E +++ +DGDG W+ T+         E     +LE+ + 
Sbjct: 77  KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLESKDS 136

Query: 198 SRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQI------AHEPDDD 257
            + +   ++ +    EDE +  D+++ EE+  ++ TD ATL     +      A    +D
Sbjct: 137 IKLQDCSALCDEEDEEDEGEAADMEEYEES-GLLETDEATLDTRKIVEACKAKADAGGED 196

Query: 258 NILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPH 317
            IL+TRTYD+ ITYDKYYQTPR+WL GYDE R  L  E + ED+SQDH +KTVTIE+HPH
Sbjct: 197 AILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPH 256

Query: 318 L-PGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVH 345
           L P    SVHPCRH  VMKKII+ +   G E  VH
Sbjct: 257 LPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVH 287

[Close]

BLAST of Cucsa.121090.7 vs. Swiss-Prot
Match: ATG3_DANRE (Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio GN=atg3 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.5e-56
Identity = 127/280 (45.36%), Postives = 163/280 (58.21%), Query Frame = 1


Query: 75  GTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKSYLPPDKQF 134
           G  E +T     S FKE GV++  EFV AGD+LV  CPTW W SG+  K K YLP DKQF
Sbjct: 14  GVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEEAKVKPYLPNDKQF 73

Query: 135 LITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDG-WLATHGKPKEEKRDEEENLPSLET 194
           L+TRNVPC +R   +E   E    E +++ +DGDG W+ T          E     SL+ 
Sbjct: 74  LLTRNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTFHNSGVTGVTEAVREISLDN 133

Query: 195 LEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDN--VVGTDPATLP------LTYQIAH 254
            +     V        G +D+D+  +  D+EE +   ++ TD ATL       L+   A 
Sbjct: 134 KDNMNMNVKTGACGNSGDDDDDEEGEAADMEEYEESGLLETDDATLDTSKMADLSKTKAE 193

Query: 255 EPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTI 314
              +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE R  L  + + ED+SQDH +KTVTI
Sbjct: 194 AGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEDRQPLTVDQMYEDISQDHVKKTVTI 253

Query: 315 EDHPHL-PGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVH 345
           E+HP+L P    SVHPCRH  VMKKII+ +   G E  VH
Sbjct: 254 ENHPNLPPPAMCSVHPCRHAEVMKKIIETVAEGGGELGVH 290

[Close]

BLAST of Cucsa.121090.7 vs. Swiss-Prot
Match: ATG3_HUMAN (Ubiquitin-like-conjugating enzyme ATG3 OS=Homo sapiens GN=ATG3 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.7e-55
Identity = 123/275 (44.73%), Postives = 163/275 (59.27%), Query Frame = 1


Query: 78  ERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLNKRKSYLPPDKQFLIT 137
           E +T     S FKE GV++  EFV AGD+LV  CPTW W +G+  K K+YLP  KQFL+T
Sbjct: 17  EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVT 76

Query: 138 RNVPCLRRAASVEEEYEAAGGEVLLDNEDGDG-WLATHGKPKEEKRDEEENLPSLETLEI 197
           +NVPC +R   +E   E    E +++ +DGDG W+ T+         E     +LE  + 
Sbjct: 77  KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLENKDN 136

Query: 198 SRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQI------AHEPDDD 257
            R +   ++      EDE +  D+++ EE+  ++ TD ATL     +           +D
Sbjct: 137 IRLQDCSALCEEEEDEDEGEAADMEEYEES-GLLETDEATLDTRKIVEACKAKTDAGGED 196

Query: 258 NILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPH 317
            IL+TRTYD+ ITYDKYYQTPR+WL GYDE R  L  E + ED+SQDH +KTVTIE+HPH
Sbjct: 197 AILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPH 256

Query: 318 L-PGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVH 345
           L P    SVHPCRH  VMKKII+ +   G E  VH
Sbjct: 257 LPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVH 287

[Close]

BLAST of Cucsa.121090.7 vs. TrEMBL
Match: A0A0A0KDT1_CUCSA (Autophagy-related protein 3 OS=Cucumis sativus GN=Csa_6G104635 PE=3 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 6.2e-163
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
           DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ
Sbjct: 121 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 283

[Close]

BLAST of Cucsa.121090.7 vs. TrEMBL
Match: A0A067JF29_JATCU (Autophagy-related protein 3 OS=Jatropha curcas GN=JCGZ_26278 PE=3 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 3.2e-143
Identity = 244/283 (86.22%), Postives = 265/283 (93.64%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF++AGDNLVSKCPTWSWESG+ N
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPN 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KRKSYLPP+KQFLITRNVPCLRRAASVEEEYEAAGGE+LLDNED DGWLATHGKPKE K 
Sbjct: 61  KRKSYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEILLDNEDNDGWLATHGKPKETKG 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
           DE++N+PS+E LEIS+   ++ IP YFGGE+E+D+PD+ D E+ DN++ TDPATL  TY 
Sbjct: 121 DEDDNVPSMEALEISKKNPIQPIPTYFGGEEEEDIPDMADYEDPDNLIETDPATLQSTYL 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           +AHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181 VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPC+HGAVMKKIIDVLMSRGVEPEV K
Sbjct: 241 VTIEDHPHLPGKHASVHPCQHGAVMKKIIDVLMSRGVEPEVDK 283

[Close]

BLAST of Cucsa.121090.7 vs. TrEMBL
Match: B9R9V7_RICCO (Autophagy-related protein 3 OS=Ricinus communis GN=RCOM_1500910 PE=3 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 3.2e-143
Identity = 245/283 (86.57%), Postives = 266/283 (93.99%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF++AGDNLV+KCPTWSWESG+ +
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVAKCPTWSWESGEPS 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KR SYLPP+KQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNED DGWLATHGKPKE   
Sbjct: 61  KRMSYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKESTG 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
           DE+EN+PSLE LEIS+   + SIP+YFGG++E+D+PD+DD E+ +N++ +DPATL  TY 
Sbjct: 121 DEDENVPSLEALEISKKSPIHSIPSYFGGKEEEDIPDMDDYEDPNNLIESDPATLQSTYL 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 283

[Close]

BLAST of Cucsa.121090.7 vs. TrEMBL
Match: W9QHL2_9ROSA (Autophagy-related protein 3 OS=Morus notabilis GN=L484_021806 PE=3 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 7.1e-143
Identity = 246/283 (86.93%), Postives = 263/283 (92.93%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQK+HEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWSWESG+ +
Sbjct: 1   MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGEPS 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KRK YLPP+KQ+LITRNVPCLRRAASVEEEYEAAGGEVLLDNED DGWLATHGKPKE K 
Sbjct: 61  KRKPYLPPEKQYLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKEGKS 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
            EEENLPS+E LEIS+   VK  P+YFGGEDE+D+PD+ D EE+DN++ TDPATL  TY 
Sbjct: 121 TEEENLPSMENLEISKNNTVKLTPSYFGGEDEEDIPDMADFEESDNIIETDPATLQSTYL 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           +A EP+DDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181 VAQEPEDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV K
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDK 283

[Close]

BLAST of Cucsa.121090.7 vs. TrEMBL
Match: A0A0K0XR60_TOBAC (Autophagy-related protein 3 OS=Nicotiana tabacum GN=ATG3 PE=2 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 2.3e-141
Identity = 240/283 (84.81%), Postives = 264/283 (93.29%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQK+HEAFKGTVERIT PRTVSAFKEKGVLS++EF+IAGDNLVSKCPTWSWESG+ +
Sbjct: 1   MVLSQKIHEAFKGTVERITSPRTVSAFKEKGVLSINEFIIAGDNLVSKCPTWSWESGEPS 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KRKSYLP DKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNE+ DGWLATHGKPKE K 
Sbjct: 61  KRKSYLPADKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEENDGWLATHGKPKESKS 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
           DE++NLPS+ETLEIS+   ++SI +YFGGE+E+D+PD+ + +E DN++ TDPATL   Y 
Sbjct: 121 DEDDNLPSMETLEISKRNTIQSISSYFGGEEEEDIPDMGEYDEPDNLIETDPATLQTAYL 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           +AHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181 VAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV K
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDK 283

[Close]

BLAST of Cucsa.121090.7 vs. TAIR10
Match: AT5G61500.1 (AT5G61500.1 autophagy 3 (APG3))

HSP 1 Score: 500.0 bits (1286), Expect = 1.2e-141
Identity = 237/283 (83.75%), Postives = 261/283 (92.23%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQKLHEAFKGTVERITGPRT+SAFKEKGVLSVSEFV+AGDNLVSKCPTWSWESGD +
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDAS 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KRK YLP DKQFLITRNVPCLRRAASV E+YEAAGGEVL+D+ED DGWLATHGKPK+ K 
Sbjct: 61  KRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKD-KG 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
            EE+NLPS++ L+I+    ++SIP YFGGE++DD+PD+++ +E DNVV  DPATL  TY 
Sbjct: 121 KEEDNLPSMDALDINEKNTIQSIPTYFGGEEDDDIPDMEEFDEADNVVENDPATLQSTYL 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           +AHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDESRMLLQPELV+EDVSQDHARKT
Sbjct: 181 VAHEPDDDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV K
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDK 282

[Close]

BLAST of Cucsa.121090.7 vs. NCBI nr
Match: gi|449445501|ref|XP_004140511.1| (PREDICTED: autophagy-related protein 3 [Cucumis sativus])

HSP 1 Score: 581.6 bits (1498), Expect = 8.9e-163
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
           DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ
Sbjct: 121 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 283

[Close]

BLAST of Cucsa.121090.7 vs. NCBI nr
Match: gi|659119685|ref|XP_008459789.1| (PREDICTED: autophagy-related protein 3 [Cucumis melo])

HSP 1 Score: 573.5 bits (1477), Expect = 2.4e-160
Identity = 278/283 (98.23%), Postives = 280/283 (98.94%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWSWESGDLN
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGDLN 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KRKSYLPPDKQFLITRNVPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPKEEK 
Sbjct: 61  KRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKS 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
           DEEENLPSLE LEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTD ATLPLTYQ
Sbjct: 121 DEEENLPSLEALEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDAATLPLTYQ 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 283

[Close]

BLAST of Cucsa.121090.7 vs. NCBI nr
Match: gi|802769852|ref|XP_012090470.1| (PREDICTED: autophagy-related protein 3 isoform X1 [Jatropha curcas])

HSP 1 Score: 516.2 bits (1328), Expect = 4.6e-143
Identity = 244/283 (86.22%), Postives = 265/283 (93.64%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF++AGDNLVSKCPTWSWESG+ N
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPN 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KRKSYLPP+KQFLITRNVPCLRRAASVEEEYEAAGGE+LLDNED DGWLATHGKPKE K 
Sbjct: 61  KRKSYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEILLDNEDNDGWLATHGKPKETKG 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
           DE++N+PS+E LEIS+   ++ IP YFGGE+E+D+PD+ D E+ DN++ TDPATL  TY 
Sbjct: 121 DEDDNVPSMEALEISKKNPIQPIPTYFGGEEEEDIPDMADYEDPDNLIETDPATLQSTYL 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           +AHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181 VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPC+HGAVMKKIIDVLMSRGVEPEV K
Sbjct: 241 VTIEDHPHLPGKHASVHPCQHGAVMKKIIDVLMSRGVEPEVDK 283

[Close]

BLAST of Cucsa.121090.7 vs. NCBI nr
Match: gi|225453454|ref|XP_002276342.1| (PREDICTED: autophagy-related protein 3 [Vitis vinifera])

HSP 1 Score: 516.2 bits (1328), Expect = 4.6e-143
Identity = 248/283 (87.63%), Postives = 263/283 (92.93%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSV+EFVIAGDNLVSKCPTWSWESG+  
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVTEFVIAGDNLVSKCPTWSWESGEPG 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KRKSYLPP+KQ+LITRNVPCLRRAASVEEEYEAAGGEVLLDNED DGWLATHGKPKE K 
Sbjct: 61  KRKSYLPPEKQYLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKETKG 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
           D EENLPS+ETL+IS+ K +KSIP YFGGE+E+D+PD+ D EETDNVV  D ATL + Y 
Sbjct: 121 DAEENLPSMETLDISKDKTIKSIPTYFGGEEEEDIPDMADYEETDNVVEADAATLQMPYL 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           +AHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE+RM LQPELVLEDVSQDHA KT
Sbjct: 181 VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEARMPLQPELVLEDVSQDHAHKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV K
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDK 283

[Close]

BLAST of Cucsa.121090.7 vs. NCBI nr
Match: gi|255539835|ref|XP_002510982.1| (PREDICTED: autophagy-related protein 3 [Ricinus communis])

HSP 1 Score: 516.2 bits (1328), Expect = 4.6e-143
Identity = 245/283 (86.57%), Postives = 266/283 (93.99%), Query Frame = 1


Query: 63  MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSWESGDLN 122
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF++AGDNLV+KCPTWSWESG+ +
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVAKCPTWSWESGEPS 60

Query: 123 KRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKR 182
           KR SYLPP+KQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNED DGWLATHGKPKE   
Sbjct: 61  KRMSYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKESTG 120

Query: 183 DEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQ 242
           DE+EN+PSLE LEIS+   + SIP+YFGG++E+D+PD+DD E+ +N++ +DPATL  TY 
Sbjct: 121 DEDENVPSLEALEISKKSPIHSIPSYFGGKEEEDIPDMDDYEDPNNLIESDPATLQSTYL 180

Query: 243 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 302
           IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
Sbjct: 181 IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT 240

Query: 303 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 346
           VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK
Sbjct: 241 VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHK 283

The following BLAST results are available for this feature:

BLAST of Cucsa.121090.7 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATG3_ARATH	2.1e-140	83.75	Autophagy-related protein 3 OS=Arabidopsis thaliana GN=ATG3 PE=1 SV=2	[more]
ATG3_DICDI	5.3e-67	46.05	Autophagy-related protein 3 OS=Dictyostelium discoideum GN=atg3 PE=3 SV=3	[more]
ATG3_MOUSE	2.5e-56	45.09	Ubiquitin-like-conjugating enzyme ATG3 OS=Mus musculus GN=Atg3 PE=1 SV=1	[more]
ATG3_DANRE	5.5e-56	45.36	Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio GN=atg3 PE=2 SV=1	[more]
ATG3_HUMAN	4.7e-55	44.73	Ubiquitin-like-conjugating enzyme ATG3 OS=Homo sapiens GN=ATG3 PE=1 SV=1	[more]

BLAST of Cucsa.121090.7 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDT1_CUCSA	6.2e-163	100.00	Autophagy-related protein 3 OS=Cucumis sativus GN=Csa_6G104635 PE=3 SV=1	[more]
A0A067JF29_JATCU	3.2e-143	86.22	Autophagy-related protein 3 OS=Jatropha curcas GN=JCGZ_26278 PE=3 SV=1	[more]
B9R9V7_RICCO	3.2e-143	86.57	Autophagy-related protein 3 OS=Ricinus communis GN=RCOM_1500910 PE=3 SV=1	[more]
W9QHL2_9ROSA	7.1e-143	86.93	Autophagy-related protein 3 OS=Morus notabilis GN=L484_021806 PE=3 SV=1	[more]
A0A0K0XR60_TOBAC	2.3e-141	84.81	Autophagy-related protein 3 OS=Nicotiana tabacum GN=ATG3 PE=2 SV=1	[more]

BLAST of Cucsa.121090.7 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61500.1	1.2e-141	83.75	autophagy 3 (APG3)	[more]

BLAST of Cucsa.121090.7 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445501\|ref\|XP_004140511.1\|	8.9e-163	100.00	PREDICTED: autophagy-related protein 3 [Cucumis sativus]	[more]
gi\|659119685\|ref\|XP_008459789.1\|	2.4e-160	98.23	PREDICTED: autophagy-related protein 3 [Cucumis melo]	[more]
gi\|802769852\|ref\|XP_012090470.1\|	4.6e-143	86.22	PREDICTED: autophagy-related protein 3 isoform X1 [Jatropha curcas]	[more]
gi\|225453454\|ref\|XP_002276342.1\|	4.6e-143	87.63	PREDICTED: autophagy-related protein 3 [Vitis vinifera]	[more]
gi\|255539835\|ref\|XP_002510982.1\|	4.6e-143	86.57	PREDICTED: autophagy-related protein 3 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007134	Autophagy-rel_prot_3_N
IPR007135	Autophagy-rel_prot_3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0015031	protein transport
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.121090	Cucsa.121090	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.121090.7	Cucsa.121090.7-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.121090.7.CDS.1	Cucsa.121090.7.CDS.1	CDS
Cucsa.121090.7.CDS.2	Cucsa.121090.7.CDS.2	CDS
Cucsa.121090.7.CDS.3	Cucsa.121090.7.CDS.3	CDS
Cucsa.121090.7.CDS.4	Cucsa.121090.7.CDS.4	CDS
Cucsa.121090.7.CDS.5	Cucsa.121090.7.CDS.5	CDS
Cucsa.121090.7.CDS.6	Cucsa.121090.7.CDS.6	CDS
Cucsa.121090.7.CDS.7	Cucsa.121090.7.CDS.7	CDS
Cucsa.121090.7.CDS.8	Cucsa.121090.7.CDS.8	CDS
Cucsa.121090.7.CDS.9	Cucsa.121090.7.CDS.9	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.121090.7.three_prime_UTR.1	Cucsa.121090.7.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007134	Autophagy-related protein 3, N-terminal	PFAM	PF03986	Autophagy_N	coord: 69..197 score: 4.7
IPR007135	Autophagy-related protein 3	PFAM	PF03987	Autophagy_act_C	coord: 262..322 score: 3.5
None	No IPR available	PANTHER	PTHR12866	AUTOPHAGOCYTOSIS PROTEIN AUT1-RELATED	coord: 63..344 score: 4.8E
None	No IPR available	PANTHER	PTHR12866:SF2	UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3	coord: 63..344 score: 4.8E