Cucsa.119440.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.119440.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Dehydration responsive element binding transcription factor
Location	scaffold00998 : 1360683 .. 1362929 (-)
Sequence length	1000

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTACGAGTTGTTTATTTAATTCGAGGTGGTGGTTTGGGGCATAGGGTTTCCCGTTCGTCCACTTTGCCGTCTTCAACGCGACTGTCTTCCGTTTCGGAATGGCACTTTAGAAACCGAATGTCCGTCCTTTGTTCGTCCTCGGAAATTTAGGAACTTCTTCACTCCACTAAAAGAGGTATTTTCTGGCTTCTCCTCCCAAAATTCAGATTCTCTTTACCATCAAAATAGGGTTTGCTTTGTTCTTGATTGTGAAATCAAAAGTGGGCCTCTTCTGTTGACTTCTCTTGTGTGTAGTCAGCGACCACTAGAATAAATGCATTTTCTCTTGTTTTTCTTTTCCTCCTTTTTCCTGAAGCTTGCGGTTGAGCTAAGGGATTTGTACAGTACGGTCTTGGGTTGGAACGAGGGTTTGAAGAAAGACAAGTGGGGTTTTGATTTGGCATGCCAGGCCTGGATATTCTCTAATTTTACTATTTATATAATGACCCATTTCTCTATATTATAGACGCCGTCTTTTGCTGGAATCTATTTCCATTTTTAAAGGCGTTCTTAGAATCTAATCGTTTCGCGCTATTTTTGCATTTTTTAAGAATTCAAGTGTACGGATCTACTATTACATGTTTAGGTAAATGGAAAACGCAAATGGGTGGTGTCTCTTTTACTGTTTTGAGGACCTAAGTGACTTCATGAGTGTGTCCTGTTGCCCGAGTGTTAATGCCAACTTCAACTTCGTCATAGAGAAATTATAGCTGGGATGGGTCTGGGATCAGCTTGTTTGCTTCTATACTCGTCGCACCAGTTATGTTTGTGGAAAACATGTTGGAATTTATATTTGCTTTGTTTGTTTTTCGAAGTGCTGAAGTTGCGGTTTACATAATTTAATTTAGGAATCACTTACTATGGAGTACGGCTAGCGAATGTAAAATCAAACATTTGTGTTCGTAGAAACTTTGTTCGTATAAGTATTTGTCCAAATTAGGGCCCGTCACCATTTGATGATACGTGTATGTTTTCAATGAGCATTGGGTGGGAGCAATGGACTTTCCTCCAATTGGGCATGAATGACTTAGATTTGTTGTAATTATCCGTACCGCCAGTAGTAGAAACTCGGAATAGTACAAGTGAACAGTTTGGAACTTGAGTTATTTCATAGCATCACACCCTATACATTTGAGCTCATAATGGTGCCTTGTAATTCATAAGTTCCTCTGCAGCTGAAGAATTAGTGTGTTGTTGGGCCCATTATAGAAATTGAACAATGAAACTTCTTGAGCTTTTCGTACACGTTTGTTTGTTTAACACACACAAGTGCTCTGTAGCCATGATGGGCCTTGAGAATTCTGTCTACGGATTTTGCTTTCTTTATAAATTTGGTTGTTTATAGTACACATGAAAATTTGAATAATCTTTTAATGCTGACAGGTTTTTTGTGGCCTATCCAATTTGTTCAGTCCAATCGAAACAATTCTTGGATGCCTAAATTAGAAAAACTACAAACAAGACGGCCTGGTTCTTTATCTGTGGCTGAGACTCTTGCTAAATGGAAAGATTACAATGATCACCTTGATTCATGTACTGATGAGCCAAAACTTACTCGTAGAGTTCCAGCCAAGGGATCGAAGAAGGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATATGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAGTGGGTTGCAGAAATTCGAGCACCGAATAGAGGAAGTCGGCTCTGGTTGGGTACATTTCCAACTGCGATTGATGCTGCACTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCACTTTAGCTCGCCTCAATTTTCCCAATGTCTCAATTCCAACCTTGCTAAAAGGAAAAGAATTATCAAGGAAGGATTCTCGTGATGAAATCAAAAGGCCTTCACTCTCTTTTTTAGGATCAACTTCACTTAGTCTGAGTTCTGAATCAACAATAACATCAGATCTGTCTGAGGATTGTGCAGTTGAAGATGTCTAGCCAGCTATAACCTTTGATCATTGTAAAGTTTGTGAATTGGGGAATCGAAACCAGGGACCGATTTTTTAAAAAAATTAATGTAATTGCCCTTCTGTGCACGAATCTGGAAATAGGGTTGATTGTAATATTATTTTTCCTTGTTTATCACAAGTACAATAGATGAAATTCACTGGAAATTTTCTAATTGAAACATTCTTCGTGAGAGGTTAGATGTATTCAAGTATAGTTTGAAATC

mRNA sequence

GTACGAGTTGTTTATTTAATTCGAGGTGGTGGTTTGGGGCATAGGGTTTCCCGTTCGTCCACTTTGCCGTCTTCAACGCGACTGTCTTCCGTTTCGGAATGGCACTTTAGAAACCGAATGTCCGTCCTTTGTTCGTCCTCGGAAATTTAGGAACTTCTTCACTCCACTAAAAGAGGTTTTTTGTGGCCTATCCAATTTGTTCAGTCCAATCGAAACAATTCTTGGATGCCTAAATTAGAAAAACTACAAACAAGACGGCCTGGTTCTTTATCTGTGGCTGAGACTCTTGCTAAATGGAAAGATTACAATGATCACCTTGATTCATGTACTGATGAGCCAAAACTTACTCGTAGAGTTCCAGCCAAGGGATCGAAGAAGGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATATGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAGTGGGTTGCAGAAATTCGAGCACCGAATAGAGGAAGTCGGCTCTGGTTGGGTACATTTCCAACTGCGATTGATGCTGCACTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCACTTTAGCTCGCCTCAATTTTCCCAATGTCTCAATTCCAACCTTGCTAAAAGGAAAAGAATTATCAAGGAAGGATTCTCGTGATGAAATCAAAAGGCCTTCACTCTCTTTTTTAGGATCAACTTCACTTAGTCTGAGTTCTGAATCAACAATAACATCAGATCTGTCTGAGGATTGTGCAGTTGAAGATGTCTAGCCAGCTATAACCTTTGATCATTGTAAAGTTTGTGAATTGGGGAATCGAAACCAGGGACCGATTTTTTAAAAAAATTAATGTAATTGCCCTTCTGTGCACGAATCTGGAAATAGGGTTGATTGTAATATTATTTTTCCTTGTTTATCACAAGTACAATAGATGAAATTCACTGGAAATTTTCTAATTGAAACATTCTTCGTGAGAGGTTAGATGTATTCAAGTATAGTTTGAAATC

Coding sequence (CDS)

ATGCCTAAATTAGAAAAACTACAAACAAGACGGCCTGGTTCTTTATCTGTGGCTGAGACTCTTGCTAAATGGAAAGATTACAATGATCACCTTGATTCATGTACTGATGAGCCAAAACTTACTCGTAGAGTTCCAGCCAAGGGATCGAAGAAGGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATATGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAGTGGGTTGCAGAAATTCGAGCACCGAATAGAGGAAGTCGGCTCTGGTTGGGTACATTTCCAACTGCGATTGATGCTGCACTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCACTTTAGCTCGCCTCAATTTTCCCAATGTCTCAATTCCAACCTTGCTAAAAGGAAAAGAATTATCAAGGAAGGATTCTCGTGATGAAATCAAAAGGCCTTCACTCTCTTTTTTAGGATCAACTTCACTTAGTCTGAGTTCTGAATCAACAATAACATCAGATCTGTCTGAGGATTGTGCAGTTGAAGATGTCTAG

Protein sequence

MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGPENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARLNFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV*

Homology

[Close]

BLAST of Cucsa.119440.1 vs. Swiss-Prot
Match: DRE2B_ORYSJ (Dehydration-responsive element-binding protein 2B OS=Oryza sativa subsp. japonica GN=DREB2B PE=2 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-41
Identity = 95/206 (46.12%), Postives = 123/206 (59.71%), Query Frame = 1


Query: 1   MPKLEKLQTRRP-----GSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMK 60
           MP ++  + +RP     G  SVAET+ +W + N+  +     PK  R+ PAKGSKKGCMK
Sbjct: 18  MPPVQPGRKKRPRRSRDGPTSVAETIKRWAELNNQQELDPQGPKKARKAPAKGSKKGCMK 77

Query: 61  GKGGPENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYG 120
           GKGGPEN RC++RGVRQRTWGKWVAEIR PN+ SRLWLGTFPTA  AA AYDEAARAMYG
Sbjct: 78  GKGGPENTRCDFRGVRQRTWGKWVAEIREPNQQSRLWLGTFPTAEAAACAYDEAARAMYG 137

Query: 121 TLARLNFPN------------VSIPTLLKGKELSRKDSRDEIKRPS----------LSFL 180
            +AR NF               ++   L G  L+   SR   +  S          LS  
Sbjct: 138 PMARTNFGQHHAPAASVQVALAAVKCALPGGGLTASKSRTSTQGASADVQDVLTGGLSAC 197

[Close]

BLAST of Cucsa.119440.1 vs. Swiss-Prot
Match: DRE2A_ARATH (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DREB2A PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-41
Identity = 82/118 (69.49%), Postives = 98/118 (83.05%), Query Frame = 1


Query: 6   KLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGPENMRC 65
           K ++R  G+ +VAE L +WK+YN+ ++  + +    R+VPAKGSKKGCMKGKGGPEN RC
Sbjct: 22  KSRSRGDGT-TVAERLKRWKEYNETVEEVSTKK---RKVPAKGSKKGCMKGKGGPENSRC 81

Query: 66  NYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARLNFP 124
           ++RGVRQR WGKWVAEIR PNRGSRLWLGTFPTA +AA AYDEAA+AMYG LARLNFP
Sbjct: 82  SFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFP 135

[Close]

BLAST of Cucsa.119440.1 vs. Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.8e-40
Identity = 85/146 (58.22%), Postives = 103/146 (70.55%), Query Frame = 1


Query: 2   PKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCT--DEPKLTRRVPAKGSKKGCMKGKGG 61
           PK  K + R  G L+VA+ L KWK+YN+ +++    +  K  R+VPAKGSKKGCMKGKGG
Sbjct: 12  PKKRKSRARA-GGLTVADRLKKWKEYNEIVEASAVKEGEKPKRKVPAKGSKKGCMKGKGG 71

Query: 62  PENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLAR 121
           P+N  C++RGVRQR WGKWVAEIR P  G+RLWLGTFPTA  AA AYDEAA AMYG+LAR
Sbjct: 72  PDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLAR 131

Query: 122 LNFPNVSIPTLLKGKELSRKDSRDEI 146
           LNFP         G E +   S+ E+
Sbjct: 132 LNFPQ------SVGSEFTSTSSQSEV 150

[Close]

BLAST of Cucsa.119440.1 vs. Swiss-Prot
Match: DRE2A_ORYSI (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica GN=DREB2A PE=3 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 3.8e-40
Identity = 88/159 (55.35%), Postives = 106/159 (66.67%), Query Frame = 1


Query: 3   KLEKLQTRRP--GSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 62
           ++ K +TRR   G  S+AET+  WK+ N  L     E   +R+ PAKGSKKGCM GKGGP
Sbjct: 14  QVRKKRTRRKSDGPDSIAETIKWWKEQNQKLQ----EENSSRKAPAKGSKKGCMAGKGGP 73

Query: 63  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 122
           EN  C YRGVRQRTWGKWVAEIR PNRG RLWLG+FPTA++AA AYDEAARAMYG  AR+
Sbjct: 74  ENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARV 133

Query: 123 NFPN---------VSIPTLL--KGKELSRKDSRDEIKRP 149
           NF +          S P+L+   G      D +DE++ P
Sbjct: 134 NFADNSTDANSGCTSAPSLMMSNGPATIPSDEKDELESP 168

[Close]

BLAST of Cucsa.119440.1 vs. Swiss-Prot
Match: DRE2A_ORYSJ (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica GN=DREB2A PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.8e-40
Identity = 88/159 (55.35%), Postives = 106/159 (66.67%), Query Frame = 1


Query: 3   KLEKLQTRRP--GSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 62
           ++ K +TRR   G  S+AET+  WK+ N  L     E   +R+ PAKGSKKGCM GKGGP
Sbjct: 14  QVRKKRTRRKSDGPDSIAETIKWWKEQNQKLQ----EENSSRKAPAKGSKKGCMAGKGGP 73

Query: 63  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 122
           EN  C YRGVRQRTWGKWVAEIR PNRG RLWLG+FPTA++AA AYDEAARAMYG  AR+
Sbjct: 74  ENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARV 133

Query: 123 NFPN---------VSIPTLL--KGKELSRKDSRDEIKRP 149
           NF +          S P+L+   G      D +DE++ P
Sbjct: 134 NFADNSTDANSGCTSAPSLMMSNGPATIPSDEKDELESP 168

[Close]

BLAST of Cucsa.119440.1 vs. TrEMBL
Match: A0A0A0KB02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G124180 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 4.7e-98
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120
           ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120

Query: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV 180
           NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV
Sbjct: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV 179

[Close]

BLAST of Cucsa.119440.1 vs. TrEMBL
Match: M5WWK2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022733mg PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.0e-57
Identity = 115/159 (72.33%), Postives = 124/159 (77.99%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60
           M KL K   R+ GS  VAETLAKWK YNDHLDSC DE K  RRVPAKGSKKGCMKGKGGP
Sbjct: 1   MTKLVKTDPRQDGSNPVAETLAKWKAYNDHLDSCNDESKPIRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120
           EN RCNYRGVRQRTWGKWVAEIR PNRGSRLWLGTFPTAI+AALAYDEAARAMYG+ ARL
Sbjct: 61  ENSRCNYRGVRQRTWGKWVAEIRTPNRGSRLWLGTFPTAIEAALAYDEAARAMYGSAARL 120

Query: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLS 160
           NFPN+SI +L          S+D   R +LS + S + S
Sbjct: 121 NFPNISISSL----------SKDPSSRATLSAVSSLATS 149

[Close]

BLAST of Cucsa.119440.1 vs. TrEMBL
Match: V7BY01_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G111200g PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.3e-52
Identity = 110/172 (63.95%), Postives = 126/172 (73.26%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60
           M  L K  ++  GS S+A+ LAKWK+YN  LDSC D  K  R+VPAKGSKKGCMKGKGGP
Sbjct: 1   MHMLAKAHSKGDGSKSLAKILAKWKEYNAQLDSCKDADKPVRKVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120
           EN RCNYRGVRQRTWGKWVAEIR PNRG+RLWLGTFPTAI AALAYDEAARAMYG+ ARL
Sbjct: 61  ENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMYGSCARL 120

Query: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSE 173
           NFPNVS+ +     E S KDS      P  +  GS+    ++ES ++   SE
Sbjct: 121 NFPNVSVSSF---SEESSKDS------PVANHSGSSMAVSANESMVSPSNSE 163

[Close]

BLAST of Cucsa.119440.1 vs. TrEMBL
Match: C6SW46_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G304300 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.9e-52
Identity = 112/176 (63.64%), Postives = 128/176 (72.73%), Query Frame = 1


Query: 4   LEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGPENM 63
           L K   +  GS S+A+ LAKWK+YN  +DS +D  K  R+VPAKGSKKGCMKGKGGPEN 
Sbjct: 2   LAKAHNKGDGSKSLAKILAKWKEYNAQIDSSSDADKPIRKVPAKGSKKGCMKGKGGPENS 61

Query: 64  RCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARLNFP 123
           RCNYRGVRQRTWGKWVAEIR PNRG+RLWLGTFPTAI AALAYDEAARAMYG+ ARLNFP
Sbjct: 62  RCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMYGSCARLNFP 121

Query: 124 NVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV 180
           NVS+ +     E S KDS      PS +  GS+    ++ES I+   S   A EDV
Sbjct: 122 NVSVSSF---SEESSKDS------PSANHCGSSMAVSANESMISPSNSGVDAEEDV 168

[Close]

BLAST of Cucsa.119440.1 vs. TrEMBL
Match: W6FHL7_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB2B PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.1e-52
Identity = 114/179 (63.69%), Postives = 133/179 (74.30%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60
           MP+LE   +R  GS S+AETLAKW++YND L S     K   RVPAKGSKKGCMKGKGGP
Sbjct: 1   MPRLENRHSRGDGSKSLAETLAKWREYNDRLYSTEGVHKPIPRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120
           EN RC++RGVRQRTWGKWV+EIRAPNRGSRLWLGTFPTAI+AALAYDEAARAMY + ARL
Sbjct: 61  ENSRCSFRGVRQRTWGKWVSEIRAPNRGSRLWLGTFPTAIEAALAYDEAARAMYSSCARL 120

Query: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV 180
           NFPN+SI   + G +   KDS   +  PS+S   S +    SE + T +  EDCA E+V
Sbjct: 121 NFPNISIS--VSGLQ---KDS-PSVATPSVS--SSQATPAGSEFSGTPNNLEDCAGEEV 171

[Close]

BLAST of Cucsa.119440.1 vs. TAIR10
Match: AT5G05410.1 (AT5G05410.1 DRE-binding protein 2A)

HSP 1 Score: 170.6 bits (431), Expect = 8.6e-43
Identity = 82/118 (69.49%), Postives = 98/118 (83.05%), Query Frame = 1


Query: 6   KLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGPENMRC 65
           K ++R  G+ +VAE L +WK+YN+ ++  + +    R+VPAKGSKKGCMKGKGGPEN RC
Sbjct: 22  KSRSRGDGT-TVAERLKRWKEYNETVEEVSTKK---RKVPAKGSKKGCMKGKGGPENSRC 81

Query: 66  NYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARLNFP 124
           ++RGVRQR WGKWVAEIR PNRGSRLWLGTFPTA +AA AYDEAA+AMYG LARLNFP
Sbjct: 82  SFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFP 135

[Close]

BLAST of Cucsa.119440.1 vs. TAIR10
Match: AT3G11020.1 (AT3G11020.1 DRE/CRT-binding protein 2B)

HSP 1 Score: 166.0 bits (419), Expect = 2.1e-41
Identity = 85/146 (58.22%), Postives = 103/146 (70.55%), Query Frame = 1


Query: 2   PKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCT--DEPKLTRRVPAKGSKKGCMKGKGG 61
           PK  K + R  G L+VA+ L KWK+YN+ +++    +  K  R+VPAKGSKKGCMKGKGG
Sbjct: 12  PKKRKSRARA-GGLTVADRLKKWKEYNEIVEASAVKEGEKPKRKVPAKGSKKGCMKGKGG 71

Query: 62  PENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLAR 121
           P+N  C++RGVRQR WGKWVAEIR P  G+RLWLGTFPTA  AA AYDEAA AMYG+LAR
Sbjct: 72  PDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLAR 131

Query: 122 LNFPNVSIPTLLKGKELSRKDSRDEI 146
           LNFP         G E +   S+ E+
Sbjct: 132 LNFPQ------SVGSEFTSTSSQSEV 150

[Close]

BLAST of Cucsa.119440.1 vs. TAIR10
Match: AT2G40340.1 (AT2G40340.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 157.9 bits (398), Expect = 5.8e-39
Identity = 85/170 (50.00%), Postives = 109/170 (64.12%), Query Frame = 1


Query: 13  GSLSVAETLAKWKDYNDHLD--SCTDE--PKLTRRVPAKGSKKGCMKGKGGPENMRCNYR 72
           G+  VAE L +W++YN+ ++  SC D   PK  R+ P KGS+KGCMKGKGGPEN  C+YR
Sbjct: 14  GTRDVAEILRQWREYNEQIEAESCIDGGGPKSIRKPPPKGSRKGCMKGKGGPENGICDYR 73

Query: 73  GVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARLNFPNVSIP 132
           GVRQR WGKWVAEIR P+ G+RLWLGTF ++ +AALAYDEAA+A+YG  ARLN P ++  
Sbjct: 74  GVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNLPEIT-- 133

Query: 133 TLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVED 179
                   +R  S             + + ++S   T  SD SE CA ED
Sbjct: 134 --------NRSSST------------AATATVSGSVTAFSDESEVCARED 161

[Close]

BLAST of Cucsa.119440.1 vs. TAIR10
Match: AT2G40350.1 (AT2G40350.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 9.2e-37
Identity = 75/127 (59.06%), Postives = 92/127 (72.44%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHL--DSCTDE--PKLTRRVPAKGSKKGCMKG 60
           MP+  K +    G+  VAE L KW++YN+    DSC D    K  R+ P K S+KGCMKG
Sbjct: 1   MPRKRKSR----GTRDVAEILRKWREYNEQTEADSCIDGGGSKPIRKAPPKRSRKGCMKG 60

Query: 61  KGGPENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGT 120
           KGGPEN  C+Y GVRQRTWGKWVAEIR P RG++LWLGTF ++ +AALAYDEA++A+YG 
Sbjct: 61  KGGPENGICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAALAYDEASKAIYGQ 120

Query: 121 LARLNFP 124
            ARLN P
Sbjct: 121 SARLNLP 123

[Close]

BLAST of Cucsa.119440.1 vs. TAIR10
Match: AT2G38340.1 (AT2G38340.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 129.4 bits (324), Expect = 2.2e-30
Identity = 63/90 (70.00%), Postives = 67/90 (74.44%), Query Frame = 1


Query: 42  RRVPAKGSKKGCMKGKGGPENMRCNYRGVRQRTWGKWVAEIRAP--------NRGSRLWL 101
           RRV AKGSKKGCM+GKGGPEN  C +RGVRQR WGKWVAEIR P        +R  RLWL
Sbjct: 45  RRVQAKGSKKGCMRGKGGPENPVCRFRGVRQRVWGKWVAEIREPVSHRGANSSRSKRLWL 104

Query: 102 GTFPTAIDAALAYDEAARAMYGTLARLNFP 124
           GTF TA +AALAYD AA  MYG  ARLNFP
Sbjct: 105 GTFATAAEAALAYDRAASVMYGPYARLNFP 134

[Close]

BLAST of Cucsa.119440.1 vs. NCBI nr
Match: gi|778712752|ref|XP_011656930.1| (PREDICTED: dehydration-responsive element-binding protein 2A-like [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 6.8e-98
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60
           MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120
           ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120

Query: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV 180
           NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV
Sbjct: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV 179

[Close]

BLAST of Cucsa.119440.1 vs. NCBI nr
Match: gi|659113103|ref|XP_008456436.1| (PREDICTED: putative dehydration-responsive element-binding protein 2H [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 2.6e-89
Identity = 168/179 (93.85%), Postives = 168/179 (93.85%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60
           MPKL KLQTR PGSLSVAETLAKWKDYNDHLDSCTDE KL RRVPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLGKLQTRLPGSLSVAETLAKWKDYNDHLDSCTDEAKLARRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120
           ENMRCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFPTAIDAALAYDEAARAMYG LARL
Sbjct: 61  ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGNLARL 120

Query: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV 180
           NFPNVSIPTLLK KELS KDS DEIKR SLSFLGSTSLSLSSESTITSD SEDCAVEDV
Sbjct: 121 NFPNVSIPTLLKEKELSTKDSPDEIKRSSLSFLGSTSLSLSSESTITSDHSEDCAVEDV 179

[Close]

BLAST of Cucsa.119440.1 vs. NCBI nr
Match: gi|658053032|ref|XP_008362249.1| (PREDICTED: putative dehydration-responsive element-binding protein 2H [Malus domestica])

HSP 1 Score: 243.0 bits (619), Expect = 3.9e-61
Identity = 124/178 (69.66%), Postives = 133/178 (74.72%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60
           MPKL K   RR G   VAETLAKWK+YNDHLDSC DE    RRVPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLVKTDXRRDGPNPVAETLAKWKEYNDHLDSCNDEGGPFRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120
           EN RCNYRGVRQRTWGKWVAEIR PNRGSRLWLGTFPTAI+AALAYDEAARAMY + ARL
Sbjct: 61  ENSRCNYRGVRQRTWGKWVAEIRTPNRGSRLWLGTFPTAIEAALAYDEAARAMYXSAARL 120

Query: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVED 179
           NFPN+SI TL          S+D     +LS L   + S  SES+  SD S DCA +D
Sbjct: 121 NFPNISISTL----------SKDSSSTKTLSXLPLLASSAGSESSARSDHSGDCAAQD 168

[Close]

BLAST of Cucsa.119440.1 vs. NCBI nr
Match: gi|645248044|ref|XP_008230119.1| (PREDICTED: putative dehydration-responsive element-binding protein 2H [Prunus mume])

HSP 1 Score: 242.7 bits (618), Expect = 5.1e-61
Identity = 124/177 (70.06%), Postives = 135/177 (76.27%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60
           M KL K   R+ GS  VAETLAKWK YNDHLDSC DE K  RRVPAKGSKKGCMKGKGGP
Sbjct: 1   MTKLVKTDPRQDGSNPVAETLAKWKAYNDHLDSCNDESKPIRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120
           EN RCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAI+AALAYDEAARAMYG+ ARL
Sbjct: 61  ENSRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIEAALAYDEAARAMYGSAARL 120

Query: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVE 178
           NFPN+SI +L          S+D   R +LS     + S  SES+  SD SE+CA +
Sbjct: 121 NFPNISISSL----------SKDPSSRATLSAPSLLATSAGSESSGRSDHSEECAAQ 167

[Close]

BLAST of Cucsa.119440.1 vs. NCBI nr
Match: gi|694330745|ref|XP_009356066.1| (PREDICTED: putative dehydration-responsive element-binding protein 2H [Pyrus x bretschneideri])

HSP 1 Score: 241.1 bits (614), Expect = 1.5e-60
Identity = 123/178 (69.10%), Postives = 135/178 (75.84%), Query Frame = 1


Query: 1   MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGP 60
           MPKL K+ TRR G   VA+TLAKWK+YNDHLDSC DE    RRVPAKGSKKGCMKGKGGP
Sbjct: 1   MPKLVKIDTRRDGPNPVAKTLAKWKEYNDHLDSCNDEVGPFRRVPAKGSKKGCMKGKGGP 60

Query: 61  ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120
           EN RCNYRGVRQRTWGKWVAEIR PNRGSRLWLGTFPTAI+AALAYDEAARA+Y + ARL
Sbjct: 61  ENSRCNYRGVRQRTWGKWVAEIRTPNRGSRLWLGTFPTAIEAALAYDEAARAVYCSAARL 120

Query: 121 NFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVED 179
           NFPN+SI TL          S+D     +LS L   + S  SES+  SD S DCA +D
Sbjct: 121 NFPNISISTL----------SKDSSSTKTLSSLPLLASSAGSESSARSDHSGDCADQD 168

The following BLAST results are available for this feature:

BLAST of Cucsa.119440.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DRE2B_ORYSJ	1.5e-41	46.12	Dehydration-responsive element-binding protein 2B OS=Oryza sativa subsp. japonic...	[more]
DRE2A_ARATH	1.5e-41	69.49	Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana GN=DRE...	[more]
DRE2B_ARATH	3.8e-40	58.22	Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DRE...	[more]
DRE2A_ORYSI	3.8e-40	55.35	Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica ...	[more]
DRE2A_ORYSJ	3.8e-40	55.35	Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonic...	[more]

BLAST of Cucsa.119440.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB02_CUCSA	4.7e-98	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G124180 PE=4 SV=1	[more]
M5WWK2_PRUPE	4.0e-57	72.33	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022733mg PE=4 S...	[more]
V7BY01_PHAVU	2.3e-52	63.95	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G111200g PE=4 SV=1	[more]
C6SW46_SOYBN	3.9e-52	63.64	Uncharacterized protein OS=Glycine max GN=GLYMA_13G304300 PE=2 SV=1	[more]
W6FHL7_9ROSA	5.1e-52	63.69	Dehydration responsive element binding transcription factor OS=Morus notabilis G...	[more]

BLAST of Cucsa.119440.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05410.1	8.6e-43	69.49	DRE-binding protein 2A	[more]
AT3G11020.1	2.1e-41	58.22	DRE/CRT-binding protein 2B	[more]
AT2G40340.1	5.8e-39	50.00	Integrase-type DNA-binding superfamily protein	[more]
AT2G40350.1	9.2e-37	59.06	Integrase-type DNA-binding superfamily protein	[more]
AT2G38340.1	2.2e-30	70.00	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Cucsa.119440.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778712752\|ref\|XP_011656930.1\|	6.8e-98	100.00	PREDICTED: dehydration-responsive element-binding protein 2A-like [Cucumis sativ...	[more]
gi\|659113103\|ref\|XP_008456436.1\|	2.6e-89	93.85	PREDICTED: putative dehydration-responsive element-binding protein 2H [Cucumis m...	[more]
gi\|658053032\|ref\|XP_008362249.1\|	3.9e-61	69.66	PREDICTED: putative dehydration-responsive element-binding protein 2H [Malus dom...	[more]
gi\|645248044\|ref\|XP_008230119.1\|	5.1e-61	70.06	PREDICTED: putative dehydration-responsive element-binding protein 2H [Prunus mu...	[more]
gi\|694330745\|ref\|XP_009356066.1\|	1.5e-60	69.10	PREDICTED: putative dehydration-responsive element-binding protein 2H [Pyrus x b...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.119440	Cucsa.119440	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.119440.1	Cucsa.119440.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.119440.1.five_prime_UTR.2	Cucsa.119440.1.five_prime_UTR.2	five_prime_UTR
Cucsa.119440.1.five_prime_UTR.1	Cucsa.119440.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.119440.1.CDS.1	Cucsa.119440.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.119440.1.three_prime_UTR.1	Cucsa.119440.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 89..105 score: 7.8E-10coord: 67..78 score: 7.8
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 66..124 score: 1.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 65..115 score: 1.7
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 66..129 score: 3.5
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 66..123 score: 21
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 66..123 score: 4.77
None	No IPR available	PANTHER	PTHR31241	FAMILY NOT NAMED	coord: 10..128 score: 1.2
None	No IPR available	PANTHER	PTHR31241:SF2	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED	coord: 10..128 score: 1.2