Cucsa.106010.3 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.106010.3
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ephrin-A3
Location	scaffold00929 : 428628 .. 431503 (+)
Sequence length	1262

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAAAGGCCTTTCGGGCAGCTTTTTtCCCGGAGTCGAGGCGTGTCGAAACAGATAAGCACAACAACAATCATCTTTCAGCTCCTTAAGTTTAATTCATCTTCATTCTCGTGTTGGGTTGTTGTCAGGTTTTGATTTTTGTAAGTCCCTTTCTATCTCTCTATTTTGGTGTTTATCGCTTGATATTTCCTCGACAGGGGTTGGTTTTTGTTGGAGTTTGGCTGTGTATAATGTTtGTTGTTTTGATGGAATTCATTGGGGAATTTGGCTGGGGTTTAGATCAGAGCTGTGTAaTTTGCTTACAGCCTTCTAGTGAAGGGATTGATTGTTGTTGTGGGTGTTATAAGATAATGTGTCTCGATCTGCTTTTGATGCAAAATTGAGAATAAAATCTTCTGAGGCCAGCGTATCTCATCAGTTTTGTTTTGTGTAATTCACCTATTGTTCTTCATTTGCTTTGTTCTTTATGTTCTTTATGTTCTTTTGGGCTTGGAAGGAAGAATTTGAGAGTTAAAACTCCAAAATGGTAGAGTTGGGATTAATTTGGGAAGACGGAGGAAGAATTTCCTGTTAGCTGCCTAAGGGTAATTGACATAACCTTCCTTCCTTTACCAACAAAAAGAAAAAaCCTCTTTAACTTTGTGCTGCTTAAAATGTCAGTATTTTaGTGTTCTTTATTATTTTTTTTGGACAAGAAAGAAGCAATTTTGTATTATTTATTAAATGAATTAACTAAAAGGACAGAAACATAGGACCTGCTTACATTAATTAGCCAAGAACGTTCAATCTCAAGTCAACCATCCGTTTTAACTGCAAcGAGGAAAAATGTACCGGGTTAGGTACATCTGAGTTTTGGGCACTTTTTCTGGTCCGTTTTCATCTTCTGACAATTAATGAGTAATTAAATATGCATCCTTATTTATGAATTATGAGACGTTTTAAGCAATAACATTAGCTAATTGAATGCAATATACCTGTGTATAATCAAATAATTAAGGTGCTTTTCCACAACTTCTCTTTTTATGTTGTCATTTTTTTtCTTTCATTTCTACTGCTATTATGCAAAACTTGGCCTATATATTCTTGAAATTTCTGAAGGTATCCTGATTGAATTTGATTTTCGATGGAATGAGTTGTAGAAAGTAAGTTACAACAAGAAGAGTTATATGAGTGGGTTGTGTTAATTTCATGTTATAGCGAAGCGATCTTCACTCATATGTTTGCTTGTCACTGCCTTGGAAAAAATTTGGAGCCATCTCTTgAACCTTCATGCCTTGCCTGCTTCTTGTTAGACTTCTTTGAATATGGATTTTTAATATCTAGGTCATTCTCATGATATTGGTGCAAACGAAAATATCGTCTTTCTCTACAATACAATCAAAATAATTGCTTGTTCGGCTGTTTTTCTTTTGATGACTTTATTGGGTTTATATCGTTGAATGTTCTACACTATTGTTTTCCTTCAAGACATAGAAATACCACCCCTAAAATAGTACGCGTAAGATTGAATTTTTTCCAAGAGATCTGATTAATGTGTTCAAAAGTGCATTTTTGGATTACTTGTACATGATGTaTTGAAATAGATGATAGTTTCTTGTTTgTTGAGTAAGCTTTTGGCAGTTGCCTTCTATAAGATGGCTAGTTTTGGGGTTTAACGTAAAATAGCCAATTTGGCTTGACTTCTCTATTGCTCaTGGCTTGTATTGTAGTCCTATTGACTAAGAATGTTTTGGGAAGGGTTGGTTGCCTCATTCTTACATCGGTTGGTAATGTAAGCGTAGGAGAACTACACTAGGGTTGGTCATTTGGTCACATTTGTTTGCCTCTCTTTGTACTAGAGCTGAGAGATGGATAAAGTATCATCGTAATGCAAAGTAGAATTCTAACAGTTTCTCCAAGTCAAAATAACCATGAGCAGCtAAGTCTCTTATTTACTACGAAGACAAAGGAGAATTATCAAATTCTCATTAAATTTATTCAATTTTATACTTCTTTATGCTGGAGTAAACCAGAAAAGTTTGGGGTGTTTGGTCTTTAATTGTGTTcATATTTGAAATGTCTTATTATGGGTGAAGTCACCACCAACAGTATTAGAAACTGAGATCAATTACTCATTTTCAAAATTGATGCATACCCTGCTAGTGCTATATGAACTTCGATAGTGTTGCAAATTGTCTAATCTGTGGTGTATATTTCAGGCTGACTGAGGAAGCTGGATCATGCACCATGGTTCTTGACAGCGTCCTTTCTTCTCCTCACAGGAGGTCCCCGTCATTCCGAAAGTCCTTTCCAAATGAGTTGGGTAGTTGGTCGACTCTTGTGCAACGACATCGCTTCCTCCTGACAGCACTTGTCCTCCTAACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGACTGACTGGGACTCAAAAAGCTCAGTGTCATCTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAATTGAAAATTCTTTGATACTTGGGATTTCGATCCAAAGCTCAtGTCTTTTGTTTGTAGTTCTTAAAAGTTTGGGTTGAATGATTTAAAAAAAAATGAAATTTAGTTAATCTGTCATACAAGGTTGTGTAGTAAGATGTAAGCGAACTCTCTATACATGATATCCGAGAAGAAAAAAaGGAATTAATCAATCATTCTTGTGTTTTGCTGATCTATAGTGTACATGCTCTTCGgTACATGAGAAgATTAACTGTGTTATCAAGCAGAAACCAATTTAATTCTTTATTTCCTAAAGTTCTGAAATGTGTTGGTTGATATGTGAATTTAAATTTGTAAATGTTACTTCTGTCAAACCACTTTGAAATACATTTCCTATTATCACTCAAA

mRNA sequence

TGGAAAGGCCTTTCGGGCAGCTTTTTTCCCGGAGTCGAGGCGTGTCGAAACAGATAAGCACAACAACAATCATCTTTCAGCTCCTTAAGTTTAATTCATCTTCATTCTCGTGTTGGGTTGTTGTCAGGTTTTGATTTTTGTAAGTCCCTTTCTATCTCTCTATTTTGGTGTTTATCGCTTGATATTTCCTCGACAGGGGTTGGTTTTTGTTGGAGTTTGGCTGTGTATAATGTTTGTTGTTTTGATGGAATTCATTGGGGAATTTGGCTGGGGTTTAGATCAGAGCTGTGTAATTTGCTTACAGCCTTCTAGTGAAGGGATTGATTGTTGTTGTGGGTGTTATAAGATAATGTGTCTCGATCTGCTTTTGATGCAAAATTGAGAATAAAATCTTCTGAGGCCAGCGTATCTCATCAGTTTTGTTTTGTGTAATTCACCTATTGTTCTTCATTTGCTTTGTTCTTTATGTTCTTTATGTTCTTTTGGGCTTGGAAGGAAGAATTTGAGAGTTAAAACTCCAAAATGGTAGAGTTGGGATTAATTTGGGAAGACGGAGGAAGAATTTCCTGTTAGCTGCCTAAGGGCTGACTGAGGAAGCTGGATCATGCACCATGGTTCTTGACAGCGTCCTTTCTTCTCCTCACAGGAGGTCCCCGTCATTCCGAAAGTCCTTTCCAAATGAGTTGGGTAGTTGGTCGACTCTTGTGCAACGACATCGCTTCCTCCTGACAGCACTTGTCCTCCTAACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGACTGACTGGGACTCAAAAAGCTCAGTGTCATCTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAATTGAAAATTCTTTGATACTTGGGATTTCGATCCAAAGCTCATGTCTTTTGTTTGTAGTTCTTAAAAGTTTGGGTTGAATGATTTAAAAAAAAATGAAATTTAGTTAATCTGTCATACAAGGTTGTGTAGTAAGATGTAAGCGAACTCTCTATACATGATATCCGAGAAGAAAAAAAGGAATTAATCAATCATTCTTGTGTTTTGCTGATCTATAGTGTACATGCTCTTCGGTACATGAGAAGATTAACTGTGTTATCAAGCAGAAACCAATTTAATTCTTTATTTCCTAAAGTTCTGAAATGTGTTGGTTGATATGTGAATTTAAATTTGTAAATGTTACTTCTGTCAAACCACTTTGAAATACATTTCCTATTATCACTCAAA

Coding sequence (CDS)

ATGGTTCTTGACAGCGTCCTTTCTTCTCCTCACAGGAGGTCCCCGTCATTCCGAAAGTCCTTTCCAAATGAGTTGGGTAGTTGGTCGACTCTTGTGCAACGACATCGCTTCCTCCTGACAGCACTTGTCCTCCTAACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCCTCTTGCTTTGGACTGACTGGGACTCAAAAAGCTCAGTGTCATCTGGAGCTTGCAAAGACTTCCATGGCTAAAGGGAAATTGAAAATTCTTTGA

Protein sequence

MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL*

Homology

[Close]

BLAST of Cucsa.106010.3 vs. TrEMBL
Match: A0A0A0K6S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431400 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


Query: 1   MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 60
           MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG
Sbjct: 27  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 86

Query: 61  SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 94
           SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL
Sbjct: 87  SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 119

[Close]

BLAST of Cucsa.106010.3 vs. TrEMBL
Match: A0A0A0L9L6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710730 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 8.1e-33
Identity = 75/95 (78.95%), Postives = 83/95 (87.37%), Query Frame = 1


Query: 1  MVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 60
          MVLDS+L+SPHRRSPSFRK FP NELGSWSTL +RHRFLLTAL LLTFLCTIYLYFA+TL
Sbjct: 1  MVLDSILASPHRRSPSFRKQFPANELGSWSTLFKRHRFLLTALALLTFLCTIYLYFAITL 60

Query: 61 G-SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 94
          G ++SSC GLTGTQ+  C LE AK S+AKGKLK L
Sbjct: 61 GATASSCSGLTGTQRELCRLEHAKASLAKGKLKFL 95

[Close]

BLAST of Cucsa.106010.3 vs. TrEMBL
Match: B9RGQ8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1442830 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 8.1e-33
Identity = 75/92 (81.52%), Postives = 84/92 (91.30%), Query Frame = 1


Query: 1   MVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 60
           MVLD++LSSPHRRSPSFRK FP +ELGSWSTLVQRHRFLLTALVLL FLCTIYLYFAVTL
Sbjct: 28  MVLDNILSSPHRRSPSFRKQFPRDELGSWSTLVQRHRFLLTALVLLAFLCTIYLYFAVTL 87

Query: 61  GSSSSCFGLTGTQKAQCHLELAKTSMAKGKLK 92
           G++ SC GLTG QKA C+LELAK+S+ KGK+K
Sbjct: 88  GATGSCSGLTGKQKALCNLELAKSSV-KGKMK 118

[Close]

BLAST of Cucsa.106010.3 vs. TrEMBL
Match: A0A0L9VFP9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g254400 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-32
Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 1


Query: 1  MVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 60
          MVLDS+LSSP  +SPSFR+ F  +ELGSWSTLVQRHRFLL+ALVLLT LCT+YLYFAVTL
Sbjct: 1  MVLDSILSSPRLKSPSFRRQFTKDELGSWSTLVQRHRFLLSALVLLTLLCTVYLYFAVTL 60

Query: 61 GSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 94
          G+S +C GLTG QKA CH+EL K S+AKGKLKIL
Sbjct: 61 GASGTCSGLTGAQKASCHMELVKDSVAKGKLKIL 94

[Close]

BLAST of Cucsa.106010.3 vs. TrEMBL
Match: A0A151S136_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_029832 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.1e-32
Identity = 73/94 (77.66%), Postives = 80/94 (85.11%), Query Frame = 1


Query: 1  MVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 60
          MVLDS+LSSP  RSPS R+ F  +ELGSWSTLVQRHRFLL+ALVLL  LCT+YLYFAVTL
Sbjct: 1  MVLDSILSSPRLRSPSLRRQFAKDELGSWSTLVQRHRFLLSALVLLAILCTVYLYFAVTL 60

Query: 61 GSSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 94
          GSS +C GLTG QKA CH+EL K SMAKGKLKIL
Sbjct: 61 GSSGTCSGLTGAQKASCHMELVKDSMAKGKLKIL 94

[Close]

BLAST of Cucsa.106010.3 vs. TAIR10
Match: AT1G16170.1 (AT1G16170.1 unknown protein)

HSP 1 Score: 114.4 bits (285), Expect = 3.8e-26
Identity = 58/92 (63.04%), Postives = 74/92 (80.43%), Query Frame = 1


Query: 1  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 60
          MVLD ++SSP RR    +K + +ELGSWSTL+QRH++LLTAL LL FLCT+YLYFAVTLG
Sbjct: 1  MVLDGLVSSPSRRQQCLKKQW-DELGSWSTLIQRHQYLLTALALLAFLCTVYLYFAVTLG 60

Query: 61 S-SSSCFGLTGTQKAQCHLELAKTSMAKGKLK 92
          +  SSC+GLTG  KA C L+L + +++KGKLK
Sbjct: 61 ARHSSCYGLTGKDKAMCQLQLVQ-ALSKGKLK 90

[Close]

BLAST of Cucsa.106010.3 vs. TAIR10
Match: AT1G79660.1 (AT1G79660.1 unknown protein)

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-22
Identity = 53/92 (57.61%), Postives = 69/92 (75.00%), Query Frame = 1


Query: 1  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 60
          MVLD ++SSP RR  + +K + ++LGS ST+VQRHRFLLTA++LL FLCTIY+YFAVTLG
Sbjct: 1  MVLDGIVSSPLRRPHALKKQW-DDLGSCSTVVQRHRFLLTAMLLLAFLCTIYIYFAVTLG 60

Query: 61 SSS-SCFGLTGTQKAQCHLELAKTSMAKGKLK 92
          +    C G+TG  KA C +E  + S + GKLK
Sbjct: 61 ARHLLCSGMTGKDKAMCQMEHIQASFSNGKLK 91

[Close]

BLAST of Cucsa.106010.3 vs. NCBI nr
Match: gi|778728887|ref|XP_011659492.1| (PREDICTED: uncharacterized protein LOC101216292 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


Query: 1  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 60
          MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG
Sbjct: 1  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 60

Query: 61 SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 94
          SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL
Sbjct: 61 SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 93

[Close]

BLAST of Cucsa.106010.3 vs. NCBI nr
Match: gi|700189975|gb|KGN45208.1| (hypothetical protein Csa_7G431400 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


Query: 1   MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 60
           MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG
Sbjct: 27  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 86

Query: 61  SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 94
           SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL
Sbjct: 87  SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 119

[Close]

BLAST of Cucsa.106010.3 vs. NCBI nr
Match: gi|659122533|ref|XP_008461194.1| (PREDICTED: uncharacterized protein LOC103499851 [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-42
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 1


Query: 1   MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG 60
           MVLDSVLSSPHRRSPSFRKSFPNELGSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLG
Sbjct: 11  MVLDSVLSSPHRRSPSFRKSFPNELGSWSTLMQRHRFLLTALVLLTFLCTIYLYFAVTLG 70

Query: 61  SSSSCFGLTGTQKAQCHLELAKTSMAKGKLKIL 94
           SSSSC+GLTGTQKAQC LELAKTS+AKGKLKIL
Sbjct: 71  SSSSCYGLTGTQKAQCQLELAKTSIAKGKLKIL 103

[Close]

BLAST of Cucsa.106010.3 vs. NCBI nr
Match: gi|255543409|ref|XP_002512767.1| (PREDICTED: uncharacterized protein LOC8280287 isoform X1 [Ricinus communis])

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-32
Identity = 75/92 (81.52%), Postives = 84/92 (91.30%), Query Frame = 1


Query: 1   MVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 60
           MVLD++LSSPHRRSPSFRK FP +ELGSWSTLVQRHRFLLTALVLL FLCTIYLYFAVTL
Sbjct: 28  MVLDNILSSPHRRSPSFRKQFPRDELGSWSTLVQRHRFLLTALVLLAFLCTIYLYFAVTL 87

Query: 61  GSSSSCFGLTGTQKAQCHLELAKTSMAKGKLK 92
           G++ SC GLTG QKA C+LELAK+S+ KGK+K
Sbjct: 88  GATGSCSGLTGKQKALCNLELAKSSV-KGKMK 118

[Close]

BLAST of Cucsa.106010.3 vs. NCBI nr
Match: gi|1000979387|ref|XP_015570687.1| (PREDICTED: uncharacterized protein LOC8280287 isoform X2 [Ricinus communis])

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-32
Identity = 75/92 (81.52%), Postives = 84/92 (91.30%), Query Frame = 1


Query: 1  MVLDSVLSSPHRRSPSFRKSFP-NELGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTL 60
          MVLD++LSSPHRRSPSFRK FP +ELGSWSTLVQRHRFLLTALVLL FLCTIYLYFAVTL
Sbjct: 1  MVLDNILSSPHRRSPSFRKQFPRDELGSWSTLVQRHRFLLTALVLLAFLCTIYLYFAVTL 60

Query: 61 GSSSSCFGLTGTQKAQCHLELAKTSMAKGKLK 92
          G++ SC GLTG QKA C+LELAK+S+ KGK+K
Sbjct: 61 GATGSCSGLTGKQKALCNLELAKSSV-KGKMK 91

The following BLAST results are available for this feature:

BLAST of Cucsa.106010.3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6S1_CUCSA	1.2e-44	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G431400 PE=4 SV=1	[more]
A0A0A0L9L6_CUCSA	8.1e-33	78.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G710730 PE=4 SV=1	[more]
B9RGQ8_RICCO	8.1e-33	81.52	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1442830 PE=4 SV=1	[more]
A0A0L9VFP9_PHAAN	2.4e-32	76.60	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g254400 PE=4 SV=1	[more]
A0A151S136_CAJCA	3.1e-32	77.66	Uncharacterized protein OS=Cajanus cajan GN=KK1_029832 PE=4 SV=1	[more]

BLAST of Cucsa.106010.3 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16170.1	3.8e-26	63.04	unknown protein	[more]
AT1G79660.1	1.2e-22	57.61	unknown protein	[more]

BLAST of Cucsa.106010.3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778728887\|ref\|XP_011659492.1\|	1.7e-44	100.00	PREDICTED: uncharacterized protein LOC101216292 [Cucumis sativus]	[more]
gi\|700189975\|gb\|KGN45208.1\|	1.7e-44	100.00	hypothetical protein Csa_7G431400 [Cucumis sativus]	[more]
gi\|659122533\|ref\|XP_008461194.1\|	2.1e-42	95.70	PREDICTED: uncharacterized protein LOC103499851 [Cucumis melo]	[more]
gi\|255543409\|ref\|XP_002512767.1\|	1.2e-32	81.52	PREDICTED: uncharacterized protein LOC8280287 isoform X1 [Ricinus communis]	[more]
gi\|1000979387\|ref\|XP_015570687.1\|	1.2e-32	81.52	PREDICTED: uncharacterized protein LOC8280287 isoform X2 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.106010	Cucsa.106010	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.106010.3	Cucsa.106010.3-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.106010.3.five_prime_UTR.1	Cucsa.106010.3.five_prime_UTR.1	five_prime_UTR
Cucsa.106010.3.five_prime_UTR.2	Cucsa.106010.3.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.106010.3.CDS.1	Cucsa.106010.3.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.106010.3.three_prime_UTR.1	Cucsa.106010.3.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34774	FAMILY NOT NAMED	coord: 2..93 score: 7.7