Cucsa.105370.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.105370.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Rhomboid-like protein
Location	scaffold00929 : 85041 .. 87084 (+)
Sequence length	831

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAGACCACCGTCGGTCCACGTGGAATCAATGTCCTATGACGTCCACAAGCCCATCTCAATGCCACCGCCACCCAGCTATTATCCTCCCCCGCCcAAACCATGGTTCCCATGGCTGGTGCCTCTCATTTTTCTAGTCAATGTGGGCATGTTTATTTTCATGTTATATGAAAATAATTGCCCCGCCATCTCTGGAAGAAACCGCTGCCTTCTTTACCCTGAGCTCGGCCGATTCTCCTTCCAACCGTTTCATGAGAATCCCCcTCCTCGGCCCTTCCATCACCATGTAAGAATAATATTATTCGTTTGTATGGAACATTAGGATATGGGTTTTGTGAATGGGGGATGGAATTGATTGACCCATGAAGAGAAAAAAaTGAATCAGGGAGGAAAAAAaCATAGAGGGAATTTTGTTATTTTtGTGATGGTTGCTGGTTTGATTTGTTTTTtCTTTGGTTCTGCAGTTTGAAAAGATATGGGGCTTTGGACAAAGAAGCAGTATTAGAACGTGGAGAAGGTTGGCGCTTGGTGTCTTGTATGTGGCTTCATGCTGGAGTTATTCATTTACTTGCAAATATGCTCAGCCTTCTCTTCATAGGAATTCGCCTCGAACAAGAATTCGGATTTTGTAAGTACTCTCAAACACATATAAGACGTGTTTGAAATGAGTTTTCGAATGTTTAAAAACACTTTTAGTCGTTCTAGACAAACTCGTAATCTATTTTGTATTGGTTTATCATTGTTTCATTGTGTCTTCGCTCTTAGCATTCATTTTCCACCTAGAAGAGAAGAGATTTTGCCCGTTTTTCTTACTTTTTAACATGAATTTGATTTTGTTTTCTTCTAGAATTTCTCAGCTCACTCTTGGTTATGTAACAAAACAGTACAAAAATCTTAAAATGGAAAATAAAAAGTGTTAAAAAAGTCATCAGTTATACTTTTAGAAAGAGTTAAAATAACTCATATAATGTTAAAAAATTGTTCGAACTGAACCCACAGTTGTATCAAAGAAAAGCTGAACCCATTTGGGATTTTGTTTTTtGTTTTAATGTGCTGAGACATTTGGGATGATTTGTTTATATTTTTGGTGTTTGGCAGTGAGAATAGGATGTTTATATGTACTTTCTGGATTTGGTGGGAGTTTACTTTCATCTATAAGTCTCAATCCAGCTGAAAATCCAACCATATCAGTTGGTGCTTCAGGTGCTCTTTTTGGCCTTTTGGGAGCTATGCTTTCTGAGCTCATTACAAATTGGACAATTTATGCAAATAAGGTAAAaCTTAAAaCCTTTTCTTTTCCTTCCATTGTTCTTTAAATCTATTTCAACTTATATGGTTTCTTTGTCATTCAAACTCAGTGTGCAGCCCTGTTGTCATTGATTCTGATCATTGCCTTAAACCTGGCAGTCGGTTTCATCCCACACGTCGATAATTCCGCTCACATCGGAGGCTTCATTTCGGGTTTTCTCCTTGGTTTCATCCTCTTAATCCGACCGCAATTCGGATACGTTAACCAGAAGTACATCCCTGCAGGCTCTGACGTGAAACGTAAATCCAAGCACAAATGTTATCAGTACCTTTTGTTGATTATAGCTCTACTCCTCTTGGTTTTtGGGTAATTGATTCGTGACTAAGAAATTACACACTCAACAATGATATATTTTTAGTTTTGTTTTCGCTAACTTTTGTTTACTTTTTATTTACGCAGATATGTTTCTGGATTAACAAAGTTGTATAGAACTGATCTACAAGTATCAAAAAACAACCGTTTCTAAAAGATAACTTTGAATTGTTTGATCAACTTGATAATCGTATTCCTCTCAAATGCCAAATTGATGAAGCATTTGAAAATTTAAATGAAAACGAACCTTATTTTTCTTTTCTTTTTTCTCGTGTACTTGTAAGATAAAAAATCATTTTAATGTGAAGTTTTAATTTCTTCTCATTCATACAGTAGTAGAAGAGTAGTATGTAGAAAAATACTCACTTCTTTGTTTACAAAGGAGGACTTCCCTTTTTCCTTTTCTTTTCCCTCTTAA

mRNA sequence

ATGGGGAAGAGACCACCGTCGGTCCACGTGGAATCAATGTCCTATGACGTCCACAAGCCCATCTCAATGCCACCGCCACCCAGCTATTATCCTCCCCCGCCCAAACCATGGTTCCCATGGCTGGTGCCTCTCATTTTTCTAGTCAATGTGGGCATTTTGAAAAGATATGGGGCTTTGGACAAAGAAGCAGTATTAGAACGTGGAGAAGGTTGGCGCTTGGTGTCTTGTATGTGGCTTCATGCTGGAGTTATTCATTTACTTGCAAATATGCTCAGCCTTCTCTTCATAGGAATTCGCCTCGAACAAGAATTCGGATTTTTGAGAATAGGATGTTTATATGTACTTTCTGGATTTGGTGGGAGTTTACTTTCATCTATAAGTCTCAATCCAGCTGAAAATCCAACCATATCAGTTGGTGCTTCAGGTGCTCTTTTTGGCCTTTTGGGAGCTATGCTTTCTGAGCTCATTACAAATTGGACAATTTATGCAAATAAGTGTGCAGCCCTGTTGTCATTGATTCTGATCATTGCCTTAAACCTGGCAGTCGGTTTCATCCCACACGTCGATAATTCCGCTCACATCGGAGGCTTCATTTCGGGTTTTCTCCTTGGTTTCATCCTCTTAATCCGACCGCAATTCGGATACGTTAACCAGAAGTACATCCCTGCAGGCTCTGACGTGAAACGTAAATCCAAGCACAAATGTTATCAGTACCTTTTGTTGATTATAGCTCTACTCCTCTTGGTTTTTGGATATGTTTCTGGATTAACAAAGTTGTATAGAACTGATCTACAAGAGGACTTCCCTTTTTCCTTTTCTTTTCCCTCTTAA

Coding sequence (CDS)

ATGGGGAAGAGACCACCGTCGGTCCACGTGGAATCAATGTCCTATGACGTCCACAAGCCCATCTCAATGCCACCGCCACCCAGCTATTATCCTCCCCCGCCcAAACCATGGTTCCCATGGCTGGTGCCTCTCATTTTTCTAGTCAATGTGGGCATTTTGAAAAGATATGGGGCTTTGGACAAAGAAGCAGTATTAGAACGTGGAGAAGGTTGGCGCTTGGTGTCTTGTATGTGGCTTCATGCTGGAGTTATTCATTTACTTGCAAATATGCTCAGCCTTCTCTTCATAGGAATTCGCCTCGAACAAGAATTCGGATTTTTGAGAATAGGATGTTTATATGTACTTTCTGGATTTGGTGGGAGTTTACTTTCATCTATAAGTCTCAATCCAGCTGAAAATCCAACCATATCAGTTGGTGCTTCAGGTGCTCTTTTTGGCCTTTTGGGAGCTATGCTTTCTGAGCTCATTACAAATTGGACAATTTATGCAAATAAGTGTGCAGCCCTGTTGTCATTGATTCTGATCATTGCCTTAAACCTGGCAGTCGGTTTCATCCCACACGTCGATAATTCCGCTCACATCGGAGGCTTCATTTCGGGTTTTCTCCTTGGTTTCATCCTCTTAATCCGACCGCAATTCGGATACGTTAACCAGAAGTACATCCCTGCAGGCTCTGACGTGAAACGTAAATCCAAGCACAAATGTTATCAGTACCTTTTGTTGATTATAGCTCTACTCCTCTTGGTTTTtGGATATGTTTCTGGATTAACAAAGTTGTATAGAACTGATCTACAAGAGGACTTCCCTTTTTCCTTTTCTTTTCCCTCTTAA

Protein sequence

MGKRPPSVHVESMSYDVHKPISMPPPPSYYPPPPKPWFPWLVPLIFLVNVGILKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFGYVSGLTKLYRTDLQEDFPFSFSFPS*

Homology

[Close]

BLAST of Cucsa.105370.1 vs. Swiss-Prot
Match: RBL5_ARATH (RHOMBOID-like protein 5 OS=Arabidopsis thaliana GN=RBL5 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.6e-77
Identity = 139/223 (62.33%), Postives = 179/223 (80.27%), Query Frame = 1


Query: 49  NVGILKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLR 108
           ++  L++ GAL++  V E GE WRL+SC+WLH G +HL+ANM+SL+ IG+RLEQEFGF+R
Sbjct: 86  SIPTLRKLGALERRLV-EEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMR 145

Query: 109 IGCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAA 168
           IG LYV+SG GGSL+S ++ +  E   +SVGASGALFGLLGAMLSELITNWTIY NKC A
Sbjct: 146 IGALYVISGLGGSLVSCLTDSQGER--VSVGASGALFGLLGAMLSELITNWTIYENKCTA 205

Query: 169 LLSLILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVK 228
           L++LILII LNL+VGF+P VDNSAH GGF++GF LGF+LL+RPQ+GYVN KYIP G D+K
Sbjct: 206 LMTLILIIVLNLSVGFLPRVDNSAHFGGFLAGFFLGFVLLLRPQYGYVNPKYIPPGYDMK 265

Query: 229 -RKSKHKCYQYLLLIIALLLLVFGYVSGLTKLYRTDLQEDFPF 271
            +KSKHKCYQ++    +L +L+ G+++G TKL R    +  PF
Sbjct: 266 HKKSKHKCYQHIFRFTSLAILLAGFIAGYTKLLREHTIQSMPF 305

[Close]

BLAST of Cucsa.105370.1 vs. Swiss-Prot
Match: RBL1_ARATH (RHOMBOID-like protein 1 OS=Arabidopsis thaliana GN=RBL1 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 8.0e-74
Identity = 145/216 (67.13%), Postives = 172/216 (79.63%), Query Frame = 1


Query: 53  LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCL 112
           L++ GALD   V+ + E WRL +C+WLHAGV H+LANMLSL+FIGIRLEQEFGF+RIG L
Sbjct: 112 LEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLL 171

Query: 113 YVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSL 172
           Y++SGFGGSLLSS+         ISVGASGALFGLLGAMLSEL+TNWTIYANK AALL+L
Sbjct: 172 YMISGFGGSLLSSLF----NRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTL 231

Query: 173 ILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAG-SDVKRKS 232
           I IIA+NLAVG +PHVDN AH+GGF SGFLLGF+ LIRPQ+GY NQ+  P G +    KS
Sbjct: 232 IFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKS 291

Query: 233 KHKCYQYLLLIIALLLLVFGYVSGLTKLYR-TDLQE 267
           KHK YQY+L I +L+LL+ GY +GL  L R TDL +
Sbjct: 292 KHKPYQYVLWITSLVLLIAGYTAGLVVLLRGTDLNK 323

HSP 2 Score: 31.2 bits (69), Expect = 2.2e+01
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1


Query: 33 PPKPWFPWLVPLIFLVNVGI 53
          P K WFPWLVP I + N+ +
Sbjct: 50 PFKLWFPWLVPAIVVANIAL 69

[Close]

BLAST of Cucsa.105370.1 vs. Swiss-Prot
Match: RBL3_ARATH (RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.7e-69
Identity = 129/215 (60.00%), Postives = 175/215 (81.40%), Query Frame = 1


Query: 53  LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCL 112
           L++ GAL+   V+E+ EGWRL++C+WLHAGVIHL ANMLSL+FIGIRLEQ+FGF+RIG +
Sbjct: 117 LEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVI 176

Query: 113 YVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSL 172
           Y+LSG GGS+LSS+ +      +ISVGASGALFGLLG+MLSEL TNWTIY+NK AALL+L
Sbjct: 177 YLLSGIGGSVLSSLFIRN----SISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLTL 236

Query: 173 ILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSK 232
           + +I +NLA+G +PHVDN AH+GGF++GFLLGFILL RPQF ++ ++++P G+ +  + K
Sbjct: 237 LFVILINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKWLAREHMPQGTPL--RYK 296

Query: 233 HKCYQYLLLIIALLLLVFGYVSGLTKLYRTDLQED 268
           +K YQYLL +++L+LL+ G+V  L  L+R +   D
Sbjct: 297 YKTYQYLLWLLSLVLLIAGFVVALLMLFRGENGND 325

[Close]

BLAST of Cucsa.105370.1 vs. Swiss-Prot
Match: RBL2_ARATH (RHOMBOID-like protein 2 OS=Arabidopsis thaliana GN=RBL2 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-66
Identity = 122/209 (58.37%), Postives = 164/209 (78.47%), Query Frame = 1


Query: 53  LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCL 112
           L++ GAL+   V+   +GWRL+SCMWLHAG+IHLL NMLSL+FIGIRLEQ+FGF+R+G +
Sbjct: 93  LEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLI 152

Query: 113 YVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSL 172
           Y++SG GGS+LSS+ L      +ISVGASGALFGLLGAMLSEL+TNWTIYANK AAL++L
Sbjct: 153 YLISGLGGSILSSLFLQE----SISVGASGALFGLLGAMLSELLTNWTIYANKAAALITL 212

Query: 173 ILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSK 232
           + IIA+NLA+G +P VDN AHIGGF++GF LGF+LL+RPQ+G+   +     +  + K K
Sbjct: 213 LFIIAINLALGMLPRVDNFAHIGGFLTGFCLGFVLLVRPQYGWEASR----TNTSRTKRK 272

Query: 233 HKCYQYLLLIIALLLLVFGYVSGLTKLYR 262
           +  YQY+L +++++LLV G    L  L++
Sbjct: 273 YSMYQYVLFVVSVVLLVVGLTVALVMLFK 293

[Close]

BLAST of Cucsa.105370.1 vs. Swiss-Prot
Match: RBL4_ARATH (RHOMBOID-like protein 4 OS=Arabidopsis thaliana GN=RBL4 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-62
Identity = 118/208 (56.73%), Postives = 158/208 (75.96%), Query Frame = 1


Query: 53  LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCL 112
           L+  G LD + V++  EGWRL+SC WLH GV+HLL NML+LLFIGIR+E+EFGF+RIG L
Sbjct: 122 LQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLL 181

Query: 113 YVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSL 172
           Y++SGFGGS+LS++ L       ISVGASGA+FGLLG MLSE+  NWTIY+NK   +++L
Sbjct: 182 YLISGFGGSILSALFLRS----NISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTL 241

Query: 173 ILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSK 232
           +LI+A+NL +G +P VDN AHIGGF +GFLLGF+LLIRP +G++NQ+  P      +  +
Sbjct: 242 VLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGPGA----KPHR 301

Query: 233 HKCYQYLLLIIALLLLVFGYVSGLTKLY 261
            K YQ +L  I+LL+LV G++ GL  L+
Sbjct: 302 FKIYQGILWTISLLILVAGFIVGLISLF 321

[Close]

BLAST of Cucsa.105370.1 vs. TrEMBL
Match: A0A0A0K8T6_CUCSA (Rhomboid-like protein OS=Cucumis sativus GN=Csa_7G432610 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 6.8e-120
Identity = 236/296 (79.73%), Postives = 239/296 (80.74%), Query Frame = 1


Query: 1   MGKRPPSVHVESMSYDVHKPISMPPPPSYYP-------PPPKP----------------- 60
           MGKRPPSVHVESMSYDVHKPISMPPPPSYYP       P   P                 
Sbjct: 1   MGKRPPSVHVESMSYDVHKPISMPPPPSYYPPPPKPWFPWLVPLIFLVNVGMFIFMLYEN 60

Query: 61  ------------WFPWLVPLIFLV---------NVGILKRYGALDKEAVLERGEGWRLVS 120
                        +P L    F           ++ ILKRYGALDKEAVLERGEGWRLVS
Sbjct: 61  NCPAISGRNRCLLYPELGRFSFQPFHENPLLGPSITILKRYGALDKEAVLERGEGWRLVS 120

Query: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPT 180
           CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPT
Sbjct: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPT 180

Query: 181 ISVGASGALFGLLGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIG 240
           ISVGASGALFGLLGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIG
Sbjct: 181 ISVGASGALFGLLGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIG 240

Query: 241 GFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFG 252
           GFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFG
Sbjct: 241 GFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFG 296

[Close]

BLAST of Cucsa.105370.1 vs. TrEMBL
Match: W9R3U9_9ROSA (Rhomboid-like protein OS=Morus notabilis GN=L484_025794 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.9e-99
Identity = 186/275 (67.64%), Postives = 207/275 (75.27%), Query Frame = 1


Query: 22  SMPPPPSYYPPPPKPWFPWLVPLIFLVNVGI----------------------------- 81
           S PPPP Y PP  KPWFPWLVPLIF+ N+ +                             
Sbjct: 21  SQPPPPHYCPPTAKPWFPWLVPLIFVANIAMFVYSMYLNNCPSTTGADQCLFYPSLKRFS 80

Query: 82  ----------------LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFI 141
                           LKR GALD++ V+E G+GWRL+SCMWLHAGVIHLLANMLSLLFI
Sbjct: 81  FQPFRENPLLGPSTTTLKRLGALDRKLVVENGQGWRLLSCMWLHAGVIHLLANMLSLLFI 140

Query: 142 GIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELI 201
           GIRLEQEFGFLRIG LYVL+GFGGSLLSS+SL+P++ PTISVGASGALFGLLGAMLSEL+
Sbjct: 141 GIRLEQEFGFLRIGILYVLAGFGGSLLSSLSLSPSDRPTISVGASGALFGLLGAMLSELL 200

Query: 202 TNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYV 252
           TNWTIYANKCAALL+L+LII LNLA GF+PHVDNSAHIGGFI+GFLLGFILLIRPQFGYV
Sbjct: 201 TNWTIYANKCAALLTLVLIIVLNLAFGFLPHVDNSAHIGGFIAGFLLGFILLIRPQFGYV 260

[Close]

BLAST of Cucsa.105370.1 vs. TrEMBL
Match: M5X066_PRUPE (Rhomboid-like protein OS=Prunus persica GN=PRUPE_ppa020971mg PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 9.8e-87
Identity = 168/294 (57.14%), Postives = 203/294 (69.05%), Query Frame = 1


Query: 1   MGKRPPSVHVESMSYDVHKPISMPPPPSYYPPPPKPWFPWLVPLIFLVNVGI-------- 60
           MGKRPPS   E M     K     PPP   PPPPKPW PWLVP+IF+ NV +        
Sbjct: 1   MGKRPPSS--EDMEKGREKARPSMPPPHLCPPPPKPWVPWLVPIIFVANVAMFIYTMYVN 60

Query: 61  -----------------------------------LKRYGALDKEAVLERGEGWRLVSCM 120
                                              LK+ GAL+++ V+E GEGWRL+SCM
Sbjct: 61  DCPSIDENKCILPSLKRFSFQPFKENPLLGPAGLTLKKLGALERQRVVEEGEGWRLLSCM 120

Query: 121 WLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPTIS 180
           WLHAGV+HLLANMLSLLFIGIRLEQEFGF+RIG LYVL+G GGSL S++ L    +PTIS
Sbjct: 121 WLHAGVVHLLANMLSLLFIGIRLEQEFGFIRIGLLYVLAGLGGSLGSTMHLMRTTSPTIS 180

Query: 181 VGASGALFGLLGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIGGF 240
           VGASGALFGLLGAMLSEL+ NWTIY NKC ALL LI++IALN+AVGF+P VDNSAHIGGF
Sbjct: 181 VGASGALFGLLGAMLSELLINWTIYVNKCTALLILIVVIALNMAVGFLPKVDNSAHIGGF 240

Query: 241 ISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFG 252
           ++GF LGFI+L+RPQ+GY+ +K++P+  D K K +HK YQY+L   AL++L+ G
Sbjct: 241 LAGFFLGFIILVRPQYGYIRRKHLPSTYDGKHKPRHKGYQYVLGSGALVILILG 292

[Close]

BLAST of Cucsa.105370.1 vs. TrEMBL
Match: A0A061GHE3_THECC (Rhomboid-like protein OS=Theobroma cacao GN=TCM_028224 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 5.4e-85
Identity = 161/220 (73.18%), Postives = 190/220 (86.36%), Query Frame = 1


Query: 53  LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCL 112
           LK  GALD + V+E  + WRL+SC+WLHAGVIHL+ANM+SLLFIGIRLEQEFGF RIG L
Sbjct: 102 LKELGALDWKLVVESKQAWRLISCIWLHAGVIHLVANMMSLLFIGIRLEQEFGFFRIGLL 161

Query: 113 YVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSL 172
           YVLSGFGGSL+S+++ +     TISVGASGALFGLLGAMLSELITNWT YANKCAALL+L
Sbjct: 162 YVLSGFGGSLMSALA-SAGRKQTISVGASGALFGLLGAMLSELITNWTNYANKCAALLTL 221

Query: 173 ILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVK-RKS 232
           +LII+LNLAVGF+PHVDNSAHIGGFISGFL+GFILLIRPQFGYV++K+IP G ++K +K 
Sbjct: 222 VLIISLNLAVGFLPHVDNSAHIGGFISGFLVGFILLIRPQFGYVSRKHIPPGYEIKHKKP 281

Query: 233 KHKCYQYLLLIIALLLLVFGYVSGLTKLYRTDLQEDFPFS 272
           KHKCYQYLL IIAL+LL+ GY +GLT+L++    E  P S
Sbjct: 282 KHKCYQYLLWIIALVLLITGYATGLTRLFKGQTFESKPLS 320

[Close]

BLAST of Cucsa.105370.1 vs. TrEMBL
Match: A0A061GHE3_THECC (Rhomboid-like protein OS=Theobroma cacao GN=TCM_028224 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.2e-05
Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 1


Query: 5  PPSVHVES-MSYDVHKPISMPPPPSYYPPPPKPWFPWLVPLIFLVNV 51
          PPS  +E+  +Y  H+    PPP  + PP PKPWF WLVPL+F+ N+
Sbjct: 8  PPSSDIETGRTYKSHRRTPPPPPQHFSPPAPKPWFAWLVPLVFVANI 54

HSP 2 Score: 321.2 bits (822), Expect = 1.2e-84
Identity = 151/222 (68.02%), Postives = 189/222 (85.14%), Query Frame = 1


Query: 53  LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCL 112
           L+  GAL+K+ V+++ E WR VSCM+LHAGV+HLLANM SLLFIG+RLE+EFGFLRIG L
Sbjct: 479 LRLLGALEKDLVVDQNEIWRFVSCMFLHAGVVHLLANMFSLLFIGVRLEKEFGFLRIGFL 538

Query: 113 YVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSL 172
           Y+LSGFGGSLLS + L   E+ T+SVGASGALFGLLGAMLSEL+TNW+IYANKCAAL SL
Sbjct: 539 YMLSGFGGSLLSILHLKETESNTVSVGASGALFGLLGAMLSELLTNWSIYANKCAALSSL 598

Query: 173 ILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSK 232
           ++I+ LNLAVGF+PHVDNSAH+GGF++GF LGF+LL+RPQ+GYVN+KYIP G DVKRKSK
Sbjct: 599 LIIVGLNLAVGFLPHVDNSAHVGGFLAGFFLGFVLLMRPQYGYVNRKYIPPGYDVKRKSK 658

Query: 233 HKCYQYLLLIIALLLLVFGYVSGLTKLYRTDLQEDFPFSFSF 275
           +KCYQY  L++++++L+ GY  GL KLY    ++ F F  S+
Sbjct: 659 YKCYQYFFLVVSVIILLVGYAYGLAKLYIEKSRDSFTFVDSY 700

[Close]

BLAST of Cucsa.105370.1 vs. TAIR10
Match: AT1G52580.1 (AT1G52580.1 RHOMBOID-like protein 5)

HSP 1 Score: 289.3 bits (739), Expect = 2.6e-78
Identity = 139/223 (62.33%), Postives = 179/223 (80.27%), Query Frame = 1


Query: 49  NVGILKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLR 108
           ++  L++ GAL++  V E GE WRL+SC+WLH G +HL+ANM+SL+ IG+RLEQEFGF+R
Sbjct: 86  SIPTLRKLGALERRLV-EEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMR 145

Query: 109 IGCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAA 168
           IG LYV+SG GGSL+S ++ +  E   +SVGASGALFGLLGAMLSELITNWTIY NKC A
Sbjct: 146 IGALYVISGLGGSLVSCLTDSQGER--VSVGASGALFGLLGAMLSELITNWTIYENKCTA 205

Query: 169 LLSLILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVK 228
           L++LILII LNL+VGF+P VDNSAH GGF++GF LGF+LL+RPQ+GYVN KYIP G D+K
Sbjct: 206 LMTLILIIVLNLSVGFLPRVDNSAHFGGFLAGFFLGFVLLLRPQYGYVNPKYIPPGYDMK 265

Query: 229 -RKSKHKCYQYLLLIIALLLLVFGYVSGLTKLYRTDLQEDFPF 271
            +KSKHKCYQ++    +L +L+ G+++G TKL R    +  PF
Sbjct: 266 HKKSKHKCYQHIFRFTSLAILLAGFIAGYTKLLREHTIQSMPF 305

[Close]

BLAST of Cucsa.105370.1 vs. TAIR10
Match: AT2G29050.1 (AT2G29050.1 RHOMBOID-like 1)

HSP 1 Score: 278.5 bits (711), Expect = 4.5e-75
Identity = 145/216 (67.13%), Postives = 172/216 (79.63%), Query Frame = 1


Query: 53  LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCL 112
           L++ GALD   V+ + E WRL +C+WLHAGV H+LANMLSL+FIGIRLEQEFGF+RIG L
Sbjct: 112 LEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLL 171

Query: 113 YVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSL 172
           Y++SGFGGSLLSS+         ISVGASGALFGLLGAMLSEL+TNWTIYANK AALL+L
Sbjct: 172 YMISGFGGSLLSSLF----NRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTL 231

Query: 173 ILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAG-SDVKRKS 232
           I IIA+NLAVG +PHVDN AH+GGF SGFLLGF+ LIRPQ+GY NQ+  P G +    KS
Sbjct: 232 IFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKS 291

Query: 233 KHKCYQYLLLIIALLLLVFGYVSGLTKLYR-TDLQE 267
           KHK YQY+L I +L+LL+ GY +GL  L R TDL +
Sbjct: 292 KHKPYQYVLWITSLVLLIAGYTAGLVVLLRGTDLNK 323

HSP 2 Score: 31.2 bits (69), Expect = 1.3e+00
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1


Query: 33 PPKPWFPWLVPLIFLVNVGI 53
          P K WFPWLVP I + N+ +
Sbjct: 50 PFKLWFPWLVPAIVVANIAL 69

[Close]

BLAST of Cucsa.105370.1 vs. TAIR10
Match: AT5G07250.1 (AT5G07250.1 RHOMBOID-like protein 3)

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-70
Identity = 129/215 (60.00%), Postives = 175/215 (81.40%), Query Frame = 1


Query: 53  LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCL 112
           L++ GAL+   V+E+ EGWRL++C+WLHAGVIHL ANMLSL+FIGIRLEQ+FGF+RIG +
Sbjct: 117 LEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVI 176

Query: 113 YVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSL 172
           Y+LSG GGS+LSS+ +      +ISVGASGALFGLLG+MLSEL TNWTIY+NK AALL+L
Sbjct: 177 YLLSGIGGSVLSSLFIRN----SISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLTL 236

Query: 173 ILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSK 232
           + +I +NLA+G +PHVDN AH+GGF++GFLLGFILL RPQF ++ ++++P G+ +  + K
Sbjct: 237 LFVILINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKWLAREHMPQGTPL--RYK 296

Query: 233 HKCYQYLLLIIALLLLVFGYVSGLTKLYRTDLQED 268
           +K YQYLL +++L+LL+ G+V  L  L+R +   D
Sbjct: 297 YKTYQYLLWLLSLVLLIAGFVVALLMLFRGENGND 325

[Close]

BLAST of Cucsa.105370.1 vs. TAIR10
Match: AT1G63120.1 (AT1G63120.1 RHOMBOID-like 2)

HSP 1 Score: 253.1 bits (645), Expect = 2.0e-67
Identity = 122/209 (58.37%), Postives = 164/209 (78.47%), Query Frame = 1


Query: 53  LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCL 112
           L++ GAL+   V+   +GWRL+SCMWLHAG+IHLL NMLSL+FIGIRLEQ+FGF+R+G +
Sbjct: 93  LEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLI 152

Query: 113 YVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSL 172
           Y++SG GGS+LSS+ L      +ISVGASGALFGLLGAMLSEL+TNWTIYANK AAL++L
Sbjct: 153 YLISGLGGSILSSLFLQE----SISVGASGALFGLLGAMLSELLTNWTIYANKAAALITL 212

Query: 173 ILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSK 232
           + IIA+NLA+G +P VDN AHIGGF++GF LGF+LL+RPQ+G+   +     +  + K K
Sbjct: 213 LFIIAINLALGMLPRVDNFAHIGGFLTGFCLGFVLLVRPQYGWEASR----TNTSRTKRK 272

Query: 233 HKCYQYLLLIIALLLLVFGYVSGLTKLYR 262
           +  YQY+L +++++LLV G    L  L++
Sbjct: 273 YSMYQYVLFVVSVVLLVVGLTVALVMLFK 293

[Close]

BLAST of Cucsa.105370.1 vs. TAIR10
Match: AT3G53780.2 (AT3G53780.2 RHOMBOID-like protein 4)

HSP 1 Score: 241.5 bits (615), Expect = 6.1e-64
Identity = 118/208 (56.73%), Postives = 158/208 (75.96%), Query Frame = 1


Query: 53  LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCL 112
           L+  G LD + V++  EGWRL+SC WLH GV+HLL NML+LLFIGIR+E+EFGF+RIG L
Sbjct: 122 LQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLL 181

Query: 113 YVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAALLSL 172
           Y++SGFGGS+LS++ L       ISVGASGA+FGLLG MLSE+  NWTIY+NK   +++L
Sbjct: 182 YLISGFGGSILSALFLRS----NISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTL 241

Query: 173 ILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSK 232
           +LI+A+NL +G +P VDN AHIGGF +GFLLGF+LLIRP +G++NQ+  P      +  +
Sbjct: 242 VLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGPGA----KPHR 301

Query: 233 HKCYQYLLLIIALLLLVFGYVSGLTKLY 261
            K YQ +L  I+LL+LV G++ GL  L+
Sbjct: 302 FKIYQGILWTISLLILVAGFIVGLISLF 321

[Close]

BLAST of Cucsa.105370.1 vs. NCBI nr
Match: gi|778730483|ref|XP_011659795.1| (PREDICTED: inactive rhomboid protein 1 [Cucumis sativus])

HSP 1 Score: 441.0 bits (1133), Expect = 1.5e-120
Identity = 238/298 (79.87%), Postives = 241/298 (80.87%), Query Frame = 1


Query: 13  MSYDVHKPISMPPPPSYYP-------PPPKP----------------------------- 72
           MSYDVHKPISMPPPPSYYP       P   P                             
Sbjct: 1   MSYDVHKPISMPPPPSYYPPPPKPWFPWLVPLIFLVNVGMFIFMLYENNCPAISGRNRCL 60

Query: 73  WFPWLVPLIFLV---------NVGILKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLL 132
            +P L    F           ++ ILKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLL
Sbjct: 61  LYPELGRFSFQPFHENPLLGPSITILKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLL 120

Query: 133 ANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGL 192
           ANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGL
Sbjct: 121 ANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGL 180

Query: 193 LGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFIL 252
           LGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFIL
Sbjct: 181 LGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFIL 240

Query: 253 LIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFGYVSGLTKLYRTDLQ 266
           LIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFGYVSGLTKLYRTDLQ
Sbjct: 241 LIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFGYVSGLTKLYRTDLQ 298

[Close]

BLAST of Cucsa.105370.1 vs. NCBI nr
Match: gi|700190046|gb|KGN45279.1| (hypothetical protein Csa_7G432610 [Cucumis sativus])

HSP 1 Score: 438.3 bits (1126), Expect = 9.7e-120
Identity = 236/296 (79.73%), Postives = 239/296 (80.74%), Query Frame = 1


Query: 1   MGKRPPSVHVESMSYDVHKPISMPPPPSYYP-------PPPKP----------------- 60
           MGKRPPSVHVESMSYDVHKPISMPPPPSYYP       P   P                 
Sbjct: 1   MGKRPPSVHVESMSYDVHKPISMPPPPSYYPPPPKPWFPWLVPLIFLVNVGMFIFMLYEN 60

Query: 61  ------------WFPWLVPLIFLV---------NVGILKRYGALDKEAVLERGEGWRLVS 120
                        +P L    F           ++ ILKRYGALDKEAVLERGEGWRLVS
Sbjct: 61  NCPAISGRNRCLLYPELGRFSFQPFHENPLLGPSITILKRYGALDKEAVLERGEGWRLVS 120

Query: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPT 180
           CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPT
Sbjct: 121 CMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPT 180

Query: 181 ISVGASGALFGLLGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIG 240
           ISVGASGALFGLLGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIG
Sbjct: 181 ISVGASGALFGLLGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIG 240

Query: 241 GFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFG 252
           GFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFG
Sbjct: 241 GFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFG 296

[Close]

BLAST of Cucsa.105370.1 vs. NCBI nr
Match: gi|659122374|ref|XP_008461110.1| (PREDICTED: rhomboid-like protease 4 [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 1.7e-103
Identity = 189/202 (93.56%), Postives = 197/202 (97.52%), Query Frame = 1


Query: 50  VGILKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFIGIRLEQEFGFLRI 109
           + IL+RYGALDKEAV+ERGEGWRLVSC WLHAGVIHLLANMLSLLFIG+RLEQEFGFL+I
Sbjct: 96  ISILRRYGALDKEAVVERGEGWRLVSCTWLHAGVIHLLANMLSLLFIGVRLEQEFGFLKI 155

Query: 110 GCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAAL 169
           GCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAAL
Sbjct: 156 GCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELITNWTIYANKCAAL 215

Query: 170 LSLILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNQKYIPAGSDVKR 229
           +SLILIIALNLAVGF+PHVDNSAHIGGFISGFLLGFILLIRPQFGYVN KYIP GSDVKR
Sbjct: 216 MSLILIIALNLAVGFVPHVDNSAHIGGFISGFLLGFILLIRPQFGYVNHKYIPPGSDVKR 275

Query: 230 KSKHKCYQYLLLIIALLLLVFG 252
           KSKHKCYQY LLI+ALLLLVFG
Sbjct: 276 KSKHKCYQYFLLIVALLLLVFG 297

[Close]

BLAST of Cucsa.105370.1 vs. NCBI nr
Match: gi|659122374|ref|XP_008461110.1| (PREDICTED: rhomboid-like protease 4 [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 6.7e-20
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 1


Query: 1  MGKRPPSVHVESMSYDVHKPIS-MPPPPSYYPPPPKPWFPWLVPLIFLVNVGI 53
          MGKRPPSV +ESMSY++HKPI+ MPPPPSYYPPPPKPWFPWLVPLIFLVNVG+
Sbjct: 1  MGKRPPSVDMESMSYNIHKPITIMPPPPSYYPPPPKPWFPWLVPLIFLVNVGM 53

HSP 2 Score: 369.4 bits (947), Expect = 5.5e-99
Identity = 186/275 (67.64%), Postives = 207/275 (75.27%), Query Frame = 1


Query: 22  SMPPPPSYYPPPPKPWFPWLVPLIFLVNVGI----------------------------- 81
           S PPPP Y PP  KPWFPWLVPLIF+ N+ +                             
Sbjct: 21  SQPPPPHYCPPTAKPWFPWLVPLIFVANIAMFVYSMYLNNCPSTTGADQCLFYPSLKRFS 80

Query: 82  ----------------LKRYGALDKEAVLERGEGWRLVSCMWLHAGVIHLLANMLSLLFI 141
                           LKR GALD++ V+E G+GWRL+SCMWLHAGVIHLLANMLSLLFI
Sbjct: 81  FQPFRENPLLGPSTTTLKRLGALDRKLVVENGQGWRLLSCMWLHAGVIHLLANMLSLLFI 140

Query: 142 GIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPTISVGASGALFGLLGAMLSELI 201
           GIRLEQEFGFLRIG LYVL+GFGGSLLSS+SL+P++ PTISVGASGALFGLLGAMLSEL+
Sbjct: 141 GIRLEQEFGFLRIGILYVLAGFGGSLLSSLSLSPSDRPTISVGASGALFGLLGAMLSELL 200

Query: 202 TNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIGGFISGFLLGFILLIRPQFGYV 252
           TNWTIYANKCAALL+L+LII LNLA GF+PHVDNSAHIGGFI+GFLLGFILLIRPQFGYV
Sbjct: 201 TNWTIYANKCAALLTLVLIIVLNLAFGFLPHVDNSAHIGGFIAGFLLGFILLIRPQFGYV 260

[Close]

BLAST of Cucsa.105370.1 vs. NCBI nr
Match: gi|645277342|ref|XP_008243724.1| (PREDICTED: rhomboid-related protein 1 [Prunus mume])

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-90
Identity = 175/312 (56.09%), Postives = 212/312 (67.95%), Query Frame = 1


Query: 1   MGKRPPSVHVESMSYDVHKPISMPPPPSYYPPPPKPWFPWLVPLIFLVNVGI-------- 60
           MGKRPPS   E M     K     PPP   PPPPKPW PWLVP+IF+ NV +        
Sbjct: 1   MGKRPPSS--EDMEKGREKARPSMPPPHLCPPPPKPWVPWLVPIIFVANVAVFIYTMYVN 60

Query: 61  -----------------------------------LKRYGALDKEAVLERGEGWRLVSCM 120
                                              LK+ GAL+++ V+E GEGWRL+SCM
Sbjct: 61  DCPSINENKCILPSLKRFSFQPFKENPLLGPAGLTLKKLGALERQRVVEEGEGWRLLSCM 120

Query: 121 WLHAGVIHLLANMLSLLFIGIRLEQEFGFLRIGCLYVLSGFGGSLLSSISLNPAENPTIS 180
           WLHAGV+HLLANMLSLLFIGIRLEQEFGF+RIG LYVL+G GGSL S++ L    +PTIS
Sbjct: 121 WLHAGVVHLLANMLSLLFIGIRLEQEFGFIRIGLLYVLAGLGGSLGSTMHLMRTTSPTIS 180

Query: 181 VGASGALFGLLGAMLSELITNWTIYANKCAALLSLILIIALNLAVGFIPHVDNSAHIGGF 240
           VGASGALFGLLGAMLSEL+ NWTIY NKC ALL LI++IALN+AVGF+P VDNSAHIGGF
Sbjct: 181 VGASGALFGLLGAMLSELLINWTIYVNKCTALLILIVVIALNMAVGFLPKVDNSAHIGGF 240

Query: 241 ISGFLLGFILLIRPQFGYVNQKYIPAGSDVKRKSKHKCYQYLLLIIALLLLVFGYVSGLT 270
           ++GF LGFI+L+RPQ+GY+ +K++P+  D K K +HK YQY+L I AL++L+ GY  G  
Sbjct: 241 LAGFFLGFIILVRPQYGYIRRKHLPSTYDGKHKPRHKGYQYVLGIGALVILILGYTYGFG 300

The following BLAST results are available for this feature:

BLAST of Cucsa.105370.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RBL5_ARATH	4.6e-77	62.33	RHOMBOID-like protein 5 OS=Arabidopsis thaliana GN=RBL5 PE=3 SV=1	[more]
RBL1_ARATH	8.0e-74	67.13	RHOMBOID-like protein 1 OS=Arabidopsis thaliana GN=RBL1 PE=2 SV=1	[more]
RBL3_ARATH	2.7e-69	60.00	RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1	[more]
RBL2_ARATH	3.6e-66	58.37	RHOMBOID-like protein 2 OS=Arabidopsis thaliana GN=RBL2 PE=1 SV=1	[more]
RBL4_ARATH	1.1e-62	56.73	RHOMBOID-like protein 4 OS=Arabidopsis thaliana GN=RBL4 PE=2 SV=1	[more]

BLAST of Cucsa.105370.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8T6_CUCSA	6.8e-120	79.73	Rhomboid-like protein OS=Cucumis sativus GN=Csa_7G432610 PE=3 SV=1	[more]
W9R3U9_9ROSA	3.9e-99	67.64	Rhomboid-like protein OS=Morus notabilis GN=L484_025794 PE=3 SV=1	[more]
M5X066_PRUPE	9.8e-87	57.14	Rhomboid-like protein OS=Prunus persica GN=PRUPE_ppa020971mg PE=3 SV=1	[more]
A0A061GHE3_THECC	5.4e-85	73.18	Rhomboid-like protein OS=Theobroma cacao GN=TCM_028224 PE=3 SV=1	[more]
A0A061GHE3_THECC	3.2e-05	48.94	Rhomboid-like protein OS=Theobroma cacao GN=TCM_028224 PE=3 SV=1	[more]

BLAST of Cucsa.105370.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G52580.1	2.6e-78	62.33	RHOMBOID-like protein 5	[more]
AT2G29050.1	4.5e-75	67.13	RHOMBOID-like 1	[more]
AT5G07250.1	1.5e-70	60.00	RHOMBOID-like protein 3	[more]
AT1G63120.1	2.0e-67	58.37	RHOMBOID-like 2	[more]
AT3G53780.2	6.1e-64	56.73	RHOMBOID-like protein 4	[more]

BLAST of Cucsa.105370.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730483\|ref\|XP_011659795.1\|	1.5e-120	79.87	PREDICTED: inactive rhomboid protein 1 [Cucumis sativus]	[more]
gi\|700190046\|gb\|KGN45279.1\|	9.7e-120	79.73	hypothetical protein Csa_7G432610 [Cucumis sativus]	[more]
gi\|659122374\|ref\|XP_008461110.1\|	1.7e-103	93.56	PREDICTED: rhomboid-like protease 4 [Cucumis melo]	[more]
gi\|659122374\|ref\|XP_008461110.1\|	6.7e-20	86.79	PREDICTED: rhomboid-like protease 4 [Cucumis melo]	[more]
gi\|645277342\|ref\|XP_008243724.1\|	1.2e-90	56.09	PREDICTED: rhomboid-related protein 1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002610	Peptidase_S54_rhomboid
IPR022764	Peptidase_S54_rhomboid_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.105370	Cucsa.105370	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.105370.1	Cucsa.105370.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.105370.1.CDS.1	Cucsa.105370.1.CDS.1	CDS
Cucsa.105370.1.CDS.2	Cucsa.105370.1.CDS.2	CDS
Cucsa.105370.1.CDS.3	Cucsa.105370.1.CDS.3	CDS
Cucsa.105370.1.CDS.4	Cucsa.105370.1.CDS.4	CDS
Cucsa.105370.1.CDS.5	Cucsa.105370.1.CDS.5	CDS
Cucsa.105370.1.CDS.6	Cucsa.105370.1.CDS.6	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 25..268 score: 9.5E
IPR022764	Peptidase S54, rhomboid domain	GENE3D	G3DSA:1.20.1540.10		coord: 39..208 score: 3.8
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 66..211 score: 8.5
None	No IPR available	PANTHER	PTHR22936:SF41	F6D8.20	coord: 25..268 score: 9.5E
None	No IPR available	unknown	SSF144091	Rhomboid-like	coord: 36..212 score: 6.41