Cucsa.103160.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.103160.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	GRAS family transcription factor
Location	scaffold00927 : 2025156 .. 2026824 (-)
Sequence length	1669

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTGTTGTTGTTTTTATATGTCCAAACAACTAAAGAGATTCGGAGTTTTTTGATGTGGGTCTTAAATGGATACCTTGTTTCGGCTTGTTAATCTTCAATCTGATCAACAATCTTACAATTCCAGTAGGAGTACTAATTCAAGCAGTTCTAGATCTTCTAGACAAAACCAATACCATCATTACCATCAACAAGAAGACGAAGAATGCTACAATCTTCTCATGGATGACGAAGATTTCTCATCGTCTAGTAATTCTAGACAATATTATAATAGTAATCCATACCATCCTCCTCACCCATCCTCTACCACCACCCCAACTCCTCCGCTCGATCAATTCTCATTCCTTTCACCTTCACCGGATTTCAACTTCGAATTTTCCGGCAGGTGGGCCCCTGATATTCTCCTTGAAACTGCCAGGGCTATTTCTGACAGGAACAGCGCTCGCGTTCAGCAACTCATGTGGATGCTAAACGAACTCAGCTCTCCCTATGGAGATACGGATCAAAAGCTAGCTGCCTATTTTCTGCAAGCCTTGTTTAGCCGTATGACTGATTCCGGCGACCGTAATTACCGCGCTTTGGCATCTGCTTCTGAGAAAACGTGCTCATTCGAATCCACTAGGAAAGTGATGCTCAAGTTTCAGGAGGTTAGCCCTTGGACCACTTTTGGCCATGTTTCTTGCAATGGCGCATTAATTGAAGCTTTAGAAGGCGAATCGAAGCTACATATAGTCGATATTAGCAATACATATTGTACGCAGTGGCCTACTTTGCTTGAAGCTCTAGCTACTCGCACCGACGATACGCCACACCTCCGTCTCACGACGGTGGTTACTACCAAGCCGAGCGGTGGGACCGGAGCTGCGGCTTCCCAGAAAGTAATGAAGGAAATTGGTACAAGAATGGAAAAGTTCGCTAGGCTTATGGGCGTACCTTTTAAATTCAATGCGCTTTACCATTCCGGTGATCTTTCGGAATTGGACATGGCGAAATTAGATATTAAAGAAGACGAGGCACTTGCGATTAACTGCGTCGGAGCTTTACGTTCCGTGGCGGCGATTAACAACCGTCGAGATTTCTTGATTTCGTCTTTTCGTAGTTTACGGCCGCGGATCATCACGGTGATTGAAGAGGAAGCGGATCTCGACGTTGGCGTTGATGGAATTGAATTTATGAGAGGGTTTCAAGAATGTTTGCGGTGGTTTAGGGTTTACTTCGAGACATTGGACGAGAGTTTCTCAAGGACGAGTAATGAGCGATTGATGCTGGAGAGAGCAGCCGGTAGGGCAATCGTCGACCTAGTGGCTTGTTCGGCGGCGGAATCAGTTGAGAGGCGGGAAACAGCGTCGCGGTGGGCTCAGCGGCTGCATGGAAATGGATTTGGTCCAGTGACGTTCAGCGACGAAGTGTGCGACGACGTTAGGGCGTTGTTGAGGAGATACAAGGAAGGATGGGCAATGACACAGAGCTCGGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGACCTTGACCTTCACTACTTGGAATTGGATCATGGAAATAGTCCGATTTGGTCGGTTCGGTTCGGTTCGGTTCAATGACTTTTTGCACGTGTCTGAAGGATGGGTGAATTTCTCGGTTTGGCCGTGTTTGTGGGGGA

mRNA sequence

TGTTTGTTGTTGTTTTTATATGTCCAAACAACTAAAGAGATTCGGAGTTTTTTGATGTGGGTCTTAAATGGATACCTTGTTTCGGCTTGTTAATCTTCAATCTGATCAACAATCTTACAATTCCAGTAGGAGTACTAATTCAAGCAGTTCTAGATCTTCTAGACAAAACCAATACCATCATTACCATCAACAAGAAGACGAAGAATGCTACAATCTTCTCATGGATGACGAAGATTTCTCATCGTCTAGTAATTCTAGACAATATTATAATAGTAATCCATACCATCCTCCTCACCCATCCTCTACCACCACCCCAACTCCTCCGCTCGATCAATTCTCATTCCTTTCACCTTCACCGGATTTCAACTTCGAATTTTCCGGCAGGTGGGCCCCTGATATTCTCCTTGAAACTGCCAGGGCTATTTCTGACAGGAACAGCGCTCGCGTTCAGCAACTCATGTGGATGCTAAACGAACTCAGCTCTCCCTATGGAGATACGGATCAAAAGCTAGCTGCCTATTTTCTGCAAGCCTTGTTTAGCCGTATGACTGATTCCGGCGACCGTAATTACCGCGCTTTGGCATCTGCTTCTGAGAAAACGTGCTCATTCGAATCCACTAGGAAAGTGATGCTCAAGTTTCAGGAGGTTAGCCCTTGGACCACTTTTGGCCATGTTTCTTGCAATGGCGCATTAATTGAAGCTTTAGAAGGCGAATCGAAGCTACATATAGTCGATATTAGCAATACATATTGTACGCAGTGGCCTACTTTGCTTGAAGCTCTAGCTACTCGCACCGACGATACGCCACACCTCCGTCTCACGACGGTGGTTACTACCAAGCCGAGCGGTGGGACCGGAGCTGCGGCTTCCCAGAAAGTAATGAAGGAAATTGGTACAAGAATGGAAAAGTTCGCTAGGCTTATGGGCGTACCTTTTAAATTCAATGCGCTTTACCATTCCGGTGATCTTTCGGAATTGGACATGGCGAAATTAGATATTAAAGAAGACGAGGCACTTGCGATTAACTGCGTCGGAGCTTTACGTTCCGTGGCGGCGATTAACAACCGTCGAGATTTCTTGATTTCGTCTTTTCGTAGTTTACGGCCGCGGATCATCACGGTGATTGAAGAGGAAGCGGATCTCGACGTTGGCGTTGATGGAATTGAATTTATGAGAGGGTTTCAAGAATGTTTGCGGTGGTTTAGGGTTTACTTCGAGACATTGGACGAGAGTTTCTCAAGGACGAGTAATGAGCGATTGATGCTGGAGAGAGCAGCCGGTAGGGCAATCGTCGACCTAGTGGCTTGTTCGGCGGCGGAATCAGTTGAGAGGCGGGAAACAGCGTCGCGGTGGGCTCAGCGGCTGCATGGAAATGGATTTGGTCCAGTGACGTTCAGCGACGAAGTGTGCGACGACGTTAGGGCGTTGTTGAGGAGATACAAGGAAGGATGGGCAATGACACAGAGCTCGGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGACCTTGACCTTCACTACTTGGAATTGGATCATGGAAATAGTCCGATTTGGtcggttcggttcggttcggttcAATGACTTTTTGCACGTGTCTGAAGGATGGGTGAATTTCTCGGTTTGGCCGTGTTTGTGGGGGA

Coding sequence (CDS)

ATGGATACCTTGTTTCGGCTTGTTAATCTTCAATCTGATCAACAATCTTACAATTCCAGTAGGAGTACTAATTCAAGCAGTTCTAGATCTTCTAGACAAAACCAATACCATCATTACCATCAACAAGAAGACGAAGAATGCTACAATCTTCTCATGGATGACGAAGATTTCTCATCGTCTAGTAATTCTAGACAATATTATAATAGTAATCCATACCATCCTCCTCACCCATCCTCTACCACCACCCCAACTCCTCCGCTCGATCAATTCTCATTCCTTTCACCTTCACCGGATTTCAACTTCGAATTTTCCGGCAGGTGGGCCCCTGATATTCTCCTTGAAACTGCCAGGGCTATTTCTGACAGGAACAGCGCTCGCGTTCAGCAACTCATGTGGATGCTAAACGAACTCAGCTCTCCCTATGGAGATACGGATCAAAAGCTAGCTGCCTATTTTCTGCAAGCCTTGTTTAGCCGTATGACTGATTCCGGCGACCGTAATTACCGCGCTTTGGCATCTGCTTCTGAGAAAACGTGCTCATTCGAATCCACTAGGAAAGTGATGCTCAAGTTTCAGGAGGTTAGCCCTTGGACCACTTTTGGCCATGTTTCTTGCAATGGCGCATTAATTGAAGCTTTAGAAGGCGAATCGAAGCTACATATAGTCGATATTAGCAATACATATTGTACGCAGTGGCCTACTTTGCTTGAAGCTCTAGCTACTCGCACCGACGATACGCCACACCTCCGTCTCACGACGGTGGTTACTACCAAGCCGAGCGGTGGGACCGGAGCTGCGGCTTCCCAGAAAGTAATGAAGGAAATTGGTACAAGAATGGAAAAGTTCGCTAGGCTTATGGGCGTACCTTTTAAATTCAATGCGCTTTACCATTCCGGTGATCTTTCGGAATTGGACATGGCGAAATTAGATATTAAAGAAGACGAGGCACTTGCGATTAACTGCGTCGGAGCTTTACGTTCCGTGGCGGCGATTAACAACCGTCGAGATTTCTTGATTTCGTCTTTTCGTAGTTTACGGCCGCGGATCATCACGGTGATTGAAGAGGAAGCGGATCTCGACGTTGGCGTTGATGGAATTGAATTTATGAGAGGGTTTCAAGAATGTTTGCGGTGGTTTAGGGTTTACTTCGAGACATTGGACGAGAGTTTCTCAAGGACGAGTAATGAGCGATTGATGCTGGAGAGAGCAGCCGGTAGGGCAATCGTCGACCTAGTGGCTTGTTCGGCGGCGGAATCAGTTGAGAGGCGGGAAACAGCGTCGCGGTGGGCTCAGCGGCTGCATGGAAATGGATTTGGTCCAGTGACGTTCAGCGACGAAGTGTGCGACGACGTTAGGGCGTTGTTGAGGAGATACAAGGAAGGATGGGCAATGACACAGAGCTCGGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGACCTTGA

Protein sequence

MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSSSNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQPVVWASAWRP*

Homology

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BLAST of Cucsa.103160.1 vs. Swiss-Prot
Match: SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 4.2e-174
Identity = 319/531 (60.08%), Postives = 391/531 (73.63%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYN-----SSRSTNSSSSRSSRQNQYHHYHQQED--EECYNLLMD 60
           MDTLFRLV+LQ  QQS +     SS S  S+++  S Q  YH+   Q D  EEC+N  MD
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQSSLSRTSTTTTGSPQTAYHYNFPQNDVVEECFNFFMD 60

Query: 61  DEDFSSSS---NSRQYYNSNPYHPP-------HPSSTTTPTPPLDQFSFLSP-------- 120
           +ED SSSS   N   + N N Y+ P       HP++++TP+      +  SP        
Sbjct: 61  EEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGHHN 120

Query: 121 ----------SPDFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTD 180
                      P F+F  + +WA  +LLE ARA SD+++AR QQ++W LNELSSPYGDT+
Sbjct: 121 DPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTE 180

Query: 181 QKLAAYFLQALFSRMTDSGDRNYRAL--ASASEKTCSFESTRKVMLKFQEVSPWTTFGHV 240
           QKLA+YFLQALF+RMT SG+R YR +  A+A+EKTCSFESTRK +LKFQEVSPW TFGHV
Sbjct: 181 QKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHV 240

Query: 241 SCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSGGT 300
           + NGA++EA++GE+K+HIVDIS+T+CTQWPTLLEALATR+DDTPHLRLTTVV        
Sbjct: 241 AANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVAN-KFVN 300

Query: 301 GAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVG 360
              AS ++MKEIG RMEKFARLMGVPFKFN ++H GDLSE D+ +LD+K DE LAINCVG
Sbjct: 301 DQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVG 360

Query: 361 ALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADL---DVGVDGIEFMRGFQECLRWFR 420
           A+  +A+  + RD +ISSFR LRPRI+TV+EEEADL   + G    EF+RGF ECLRWFR
Sbjct: 361 AMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFR 420

Query: 421 VYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRWAQRLHGNGFGP 480
           V FE+ +ESF RTSNERLMLERAAGRAIVDLVAC  ++S ERRETA +W++R+  +GFG 
Sbjct: 421 VCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGA 480

Query: 481 VTFSDEVCDDVRALLRRYKEG-WAMTQSSDVAGIFLTWKEQPVVWASAWRP 491
           V +SDEV DDVRALLRRYKEG W+M Q  D AGIFL W++QPVVWASAWRP
Sbjct: 481 VGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWRP 530

[Close]

BLAST of Cucsa.103160.1 vs. Swiss-Prot
Match: SHR1_ORYSI (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica GN=SHR1 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 2.6e-144
Identity = 302/605 (49.92%), Postives = 382/605 (63.14%), Query Frame = 1


Query: 1   MDTLFRLVNLQ--SDQQ-------SYNSSRSTNSSSSRSSRQ------NQYHH------- 60
           MDTLFRLV+LQ  S+QQ       SYNS RST SS SRSS        + YHH       
Sbjct: 1   MDTLFRLVSLQAASEQQQQQQQSASYNS-RSTTSSGSRSSSHQTNASYSYYHHSSNSGGG 60

Query: 61  --------------------YHQQEDEECYNL----LMDDEDFSSSSNSRQYYNSNPYHP 120
                               Y +   EEC N     L  DEDFSSSS+SR +++  P   
Sbjct: 61  GGGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMDEDFSSSSSSRHFHHGAPVQQ 120

Query: 121 PHPSSTTTPT-----PPLDQFSF-------------LSPSPDFNFEFS------------ 180
             P +++TPT     PPL   S              LS  PD N +FS            
Sbjct: 121 QQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTAS 180

Query: 181 ---------GRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQA 240
                    GRWA  +LLE AR+++ R+S RVQQLMWMLNEL+SPYGD +QKLA+YFLQ 
Sbjct: 181 SGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQG 240

Query: 241 LFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIE---- 300
           LF+R+T SG R  R LA+AS++  SF+STR+  L+FQE+SPW++FGHV+ NGA++E    
Sbjct: 241 LFARLTASGQRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLE 300

Query: 301 ----ALEGESKLHIVDISNTYCTQWPTLLEALATRT-DDTPHLRLTTVVTTKPSGGTGAA 360
               A     + HI+D+SNT+CTQWPTLLEALATR+ D+TPHL +TTVV+  PS  T  A
Sbjct: 301 VAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPT--A 360

Query: 361 ASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKE---DEALAINCVG 420
           A Q+VM+EIG RMEKFARLMGVPF+F A++HSGDL+ELD+  LD++E     ALA+NCV 
Sbjct: 361 AVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVN 420

Query: 421 ALRSVA-AINNRRDFLISSFRSLRPRIITVIEEEADL------------DVGVDGIEFMR 480
           +LR V      RRD   +S R L PR++TV+EEEADL            + G     F++
Sbjct: 421 SLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLK 480

Query: 481 GFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRWA 491
            F E LR+F  Y ++L+ESF +TSNERL LER AGRAIVDLV+C A+ES+ERRETA+ WA
Sbjct: 481 VFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWA 540

[Close]

BLAST of Cucsa.103160.1 vs. Swiss-Prot
Match: SHR1_ORYSJ (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica GN=SHR1 PE=1 SV=2)

HSP 1 Score: 509.6 bits (1311), Expect = 3.8e-143
Identity = 301/605 (49.75%), Postives = 381/605 (62.98%), Query Frame = 1


Query: 1   MDTLFRLVNLQ--SDQQ-------SYNSSRSTNSSSSRSSRQ------NQYHH------- 60
           MDTLFRLV+LQ  S+QQ       SYNS RST SS SRSS        + YHH       
Sbjct: 1   MDTLFRLVSLQAASEQQQQQQQSASYNS-RSTTSSGSRSSSHQTNASYSYYHHSSNSGGG 60

Query: 61  --------------------YHQQEDEECYNL----LMDDEDFSSSSNSRQYYNSNPYHP 120
                               Y +   EEC N     L  DEDFSSSS+SR +++      
Sbjct: 61  GGGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQ 120

Query: 121 PHPSSTTTPT-----PPLDQFSF-------------LSPSPDFNFEFS------------ 180
             P +++TPT     PPL   S              LS  PD N +FS            
Sbjct: 121 QQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTAS 180

Query: 181 ---------GRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQA 240
                    GRWA  +LLE AR+++ R+S RVQQLMWMLNEL+SPYGD +QKLA+YFLQ 
Sbjct: 181 SGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQG 240

Query: 241 LFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIE---- 300
           LF+R+T SG R  R LA+AS++  SF+STR+  L+FQE+SPW++FGHV+ NGA++E    
Sbjct: 241 LFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLE 300

Query: 301 ----ALEGESKLHIVDISNTYCTQWPTLLEALATRT-DDTPHLRLTTVVTTKPSGGTGAA 360
               A     + HI+D+SNT+CTQWPTLLEALATR+ D+TPHL +TTVV+  PS  T  A
Sbjct: 301 VAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPT--A 360

Query: 361 ASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKE---DEALAINCVG 420
           A Q+VM+EIG RMEKFARLMGVPF+F A++HSGDL+ELD+  LD++E     ALA+NCV 
Sbjct: 361 AVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVN 420

Query: 421 ALRSVA-AINNRRDFLISSFRSLRPRIITVIEEEADL------------DVGVDGIEFMR 480
           +LR V      RRD   +S R L PR++TV+EEEADL            + G     F++
Sbjct: 421 SLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLK 480

Query: 481 GFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRWA 491
            F E LR+F  Y ++L+ESF +TSNERL LER AGRAIVDLV+C A+ES+ERRETA+ WA
Sbjct: 481 VFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWA 540

[Close]

BLAST of Cucsa.103160.1 vs. Swiss-Prot
Match: SHR2_ORYSJ (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 1.3e-138
Identity = 295/610 (48.36%), Postives = 373/610 (61.15%), Query Frame = 1


Query: 1   MDTLFRLVNLQS-------------DQ--QSYNSSRSTNSSSSRSSRQNQ--YHHYHQQE 60
           MDTLFRLV+L               DQ  +SY SSR + SS S     N   YHH H   
Sbjct: 1   MDTLFRLVSLHHHHHHQHAASPSPPDQPHKSYPSSRGSTSSPSSHHTHNHTYYHHSHSHY 60

Query: 61  D-------------------------------EECYN--LLMDDEDFSSSSNSRQYYN-- 120
           +                               EEC N      DEDFSSSS+SRQ+++  
Sbjct: 61  NNNSNTNYYYQGGGGGGGGYYYAEEQQPAAYLEECGNGHQFYMDEDFSSSSSSRQFHSGT 120

Query: 121 ---SNPYHPPHPSSTTTPTPPLDQFS---FLSPSPDFNFEF------------------- 180
              S+   PP PS+TT+       F    F  P  D + +F                   
Sbjct: 121 GAPSSAPVPPPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAA 180

Query: 181 ---SGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRM 240
              SGRWA  +L+E ARA++ R+S RVQQLMWMLNEL+SPYGD DQKLA+YFLQ LF+R+
Sbjct: 181 PSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL 240

Query: 241 TDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEA-LEG---- 300
           T SG R  R LA+AS++  SF+STR+  LKFQE+SPWT FGHV+ NGA++E+ LE     
Sbjct: 241 TTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAG 300

Query: 301 --------------ESKLHIVDISNTYCTQWPTLLEALATR-TDDTPHLRLTTVVTTKPS 360
                          ++LHI+D+SNT+CTQWPTLLEALATR +DDTPHL +TTVV T   
Sbjct: 301 AAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPT--- 360

Query: 361 GGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKE---DEAL 420
               +AA+Q+VM+EIG R+EKFARLMGVPF F A++HSGDL++LD+A LD++E     AL
Sbjct: 361 -AAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLREGGATAAL 420

Query: 421 AINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADL-----DVGVDG---IEFM 480
           A+NCV ALR VA     RD  ++S R L PR++TV+EEEADL     D   +      F+
Sbjct: 421 AVNCVNALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFV 480

Query: 481 RGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRW 491
           + F E LR+F  Y ++L+ESF +TSNERL LERA GRAIVDLV+C A++S ERRETA+ W
Sbjct: 481 KVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASW 540

[Close]

BLAST of Cucsa.103160.1 vs. Swiss-Prot
Match: SHR2_ORYSI (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 2.8e-138
Identity = 294/610 (48.20%), Postives = 373/610 (61.15%), Query Frame = 1


Query: 1   MDTLFRLVNLQS-------------DQ--QSYNSSRSTNSSSSRSSRQNQ--YHHYHQQE 60
           MDTLFRLV+L               DQ  +SY SSR + SS S     N   YHH H   
Sbjct: 1   MDTLFRLVSLHHHHHHQHAASPSPPDQPHKSYPSSRGSTSSPSSHHTHNHTYYHHSHSHY 60

Query: 61  D-------------------------------EECYN--LLMDDEDFSSSSNSRQYYN-- 120
           +                               EEC N      DEDFSSSS+SRQ+++  
Sbjct: 61  NNNSNTNYYYQGGGGGGGGYYYAEEQQPAAYLEECGNGHQFYMDEDFSSSSSSRQFHSGT 120

Query: 121 ---SNPYHPPHPSSTTTPTPPLDQFS---FLSPSPDFNFEF------------------- 180
              S+   PP PS+TT+       F    F  P  D + +F                   
Sbjct: 121 GAPSSAPVPPPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAA 180

Query: 181 ---SGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRM 240
              SGRWA  +L+E ARA++ R+S RVQQLMWMLNEL+SPYGD DQKLA+YFLQ LF+R+
Sbjct: 181 PSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL 240

Query: 241 TDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEA-LEG---- 300
           T SG R  R LA+AS++  SF+STR+  LKFQE+SPWT FGHV+ NGA++E+ LE     
Sbjct: 241 TTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAG 300

Query: 301 --------------ESKLHIVDISNTYCTQWPTLLEALATR-TDDTPHLRLTTVVTTKPS 360
                          ++LHI+D+SNT+CTQWPTLLEALATR +DDTPHL +TTVV T   
Sbjct: 301 AAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPT--- 360

Query: 361 GGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKE---DEAL 420
               +AA+Q+VM+EIG R+EKFARLMGVPF F A++H+GDL++LD+A LD++E     AL
Sbjct: 361 -AAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAAL 420

Query: 421 AINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADL-----DVGVDG---IEFM 480
           A+NCV ALR VA     RD  ++S R L PR++TV+EEEADL     D   +      F+
Sbjct: 421 AVNCVNALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFV 480

Query: 481 RGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRW 491
           + F E LR+F  Y ++L+ESF +TSNERL LERA GRAIVDLV+C A++S ERRETA+ W
Sbjct: 481 KVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASW 540

[Close]

BLAST of Cucsa.103160.1 vs. TrEMBL
Match: A0A0A0KGH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495620 PE=3 SV=1)

HSP 1 Score: 990.3 bits (2559), Expect = 8.2e-286
Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS
Sbjct: 61  SNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS
Sbjct: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALA 240
           FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALA
Sbjct: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
           VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV
Sbjct: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480
           ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ
Sbjct: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480

Query: 481 PVVWASAWRP 491
           PVVWASAWRP
Sbjct: 481 PVVWASAWRP 490

[Close]

BLAST of Cucsa.103160.1 vs. TrEMBL
Match: A0A067KAN4_JATCU (GRAS12 protein OS=Jatropha curcas GN=GRAS12 PE=2 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 3.3e-218
Identity = 382/501 (76.25%), Postives = 437/501 (87.23%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLV+LQ   QS+N+S S  SSSSRSSRQN +HHY QQEDEEC+N  MD+EDFSSS
Sbjct: 1   MDTLFRLVSLQQSDQSFNNSTSRTSSSSRSSRQNTHHHY-QQEDEECFNFFMDEEDFSSS 60

Query: 61  SNSRQYYNSNPYHPPHPSSTTTPTP---PLDQ--FSFLSPSPDFNFEFSGRWAPDILLET 120
           S SR Y+  +  H P P+ T TPTP   PL+   FSF SPS D NFEFSG+WA D+LLET
Sbjct: 61  S-SRHYFPYHHQHHPTPTPTPTPTPTTQPLESPDFSF-SPSHDLNFEFSGKWASDVLLET 120

Query: 121 ARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASAS 180
           ARAI+D+NSARVQQLMWMLNEL SPYGD D KLA+YFLQALFSRMTDSG+R YR LASAS
Sbjct: 121 ARAIADKNSARVQQLMWMLNELGSPYGDIDSKLASYFLQALFSRMTDSGERCYRTLASAS 180

Query: 181 EKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTL 240
           +KTCSFESTRK++LK+QEVSPWTTFGHVSCNGAL+EALEGESKLHI+DISNTYCTQWPTL
Sbjct: 181 DKTCSFESTRKMVLKYQEVSPWTTFGHVSCNGALMEALEGESKLHIIDISNTYCTQWPTL 240

Query: 241 LEALATRTDDTPHLRLTTVVTTKPS-----GGTGAAAS-QKVMKEIGTRMEKFARLMGVP 300
           LEALATRTD+TPHLRLTT+V TK       GG G  AS QKVMKEIG RMEKFARLMGVP
Sbjct: 241 LEALATRTDETPHLRLTTIVATKTGAAGGGGGNGGLASVQKVMKEIGNRMEKFARLMGVP 300

Query: 301 FKFNALYHSGDLSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRI 360
           FKFN ++H GDL +L++++LDIKEDEALAINCVG+L SV ++ NRRD++ISSFR L+PRI
Sbjct: 301 FKFNFIHHFGDLCDLNLSELDIKEDEALAINCVGSLHSVTSVGNRRDYIISSFRRLQPRI 360

Query: 361 ITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIV 420
           IT++EEEADLDVG+DG+EF+RGFQECLRWFRVYFE+L+E+FSRTSNERLMLER AGRAIV
Sbjct: 361 ITIVEEEADLDVGIDGLEFVRGFQECLRWFRVYFESLEETFSRTSNERLMLERVAGRAIV 420

Query: 421 DLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSD 480
           DLVAC+ ++S+ERRETA+RW+ RLH  GF PV+FSDEVCDDVRALLRRYKEGW+MTQ +D
Sbjct: 421 DLVACAPSDSIERRETATRWSSRLHACGFSPVSFSDEVCDDVRALLRRYKEGWSMTQCND 480

Query: 481 VAGIFLTWKEQPVVWASAWRP 491
            AGIFL WK+QPVVWASAWRP
Sbjct: 481 -AGIFLCWKDQPVVWASAWRP 497

[Close]

BLAST of Cucsa.103160.1 vs. TrEMBL
Match: F6HSS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00030 PE=3 SV=1)

HSP 1 Score: 755.0 bits (1948), Expect = 5.8e-215
Identity = 389/506 (76.88%), Postives = 436/506 (86.17%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLV+LQSDQ SYNSSR+  SSSSRSSRQN  HH+H QEDEEC+N  MD+EDFSSS
Sbjct: 1   MDTLFRLVSLQSDQ-SYNSSRT--SSSSRSSRQN--HHHHHQEDEECFNFFMDEEDFSSS 60

Query: 61  SNSRQYYNSNPYHPP-HPSSTTTPTPPLD-----------QFSFLSPSPDFNFEF----S 120
           S S+ YY   PY    HPS+TTTPT               +FSF SP+ D + EF    S
Sbjct: 61  S-SKHYY---PYQQQTHPSTTTTPTTTNTSTPTHHAFEPTEFSF-SPARDLHLEFNSSAS 120

Query: 121 GRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSG 180
           G+WA +ILLETARAI+D+NSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSG
Sbjct: 121 GKWASEILLETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSG 180

Query: 181 DRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDI 240
           +R YR L SASEKTCSFESTRK++LKFQEVSPWTTFGHV+CNGA++EALEGESKLHI+DI
Sbjct: 181 ERCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEALEGESKLHIIDI 240

Query: 241 SNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFAR 300
           SNTYCTQWPTLLEALATRTD+TPHLRLTTVVT+K   G G A  QK+MKEIG RMEKFAR
Sbjct: 241 SNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAGTG-GMAPVQKLMKEIGNRMEKFAR 300

Query: 301 LMGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRS 360
           LMGVPFKFN L+HSGDLS L++A+LDIK+DEALA+NCVGAL SV A  NRRD ++SSFR 
Sbjct: 301 LMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVTAFGNRRDIVVSSFRR 360

Query: 361 LRPRIITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAA 420
           L PRIITV+EEEADLDVGVDG +F++GFQECLRWFRVY E+LDESF RTSNERLMLERAA
Sbjct: 361 LHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAA 420

Query: 421 GRAIVDLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAM 480
           GRAIVDLVAC  +ES+ERRETA+RW+QRLH +GF PV+FSDEVCDDVRALLRRYKEGW+M
Sbjct: 421 GRAIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSM 480

Query: 481 TQSSDVAGIFLTWKEQPVVWASAWRP 491
           TQSSD AGIFL+WK+QPVVW SAW+P
Sbjct: 481 TQSSD-AGIFLSWKDQPVVWTSAWKP 494

[Close]

BLAST of Cucsa.103160.1 vs. TrEMBL
Match: A5AQ59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001968 PE=3 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 1.2e-212
Identity = 379/496 (76.41%), Postives = 423/496 (85.28%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLV+LQSDQ SYNSSR+  SSSSRSSRQN  HH+H QEDEEC+N  MD+EDFSSS
Sbjct: 1   MDTLFRLVSLQSDQ-SYNSSRT--SSSSRSSRQN--HHHHHQEDEECFNFFMDEEDFSSS 60

Query: 61  SNSRQYYNSNPYHPPHPSSTTTPTP------PLDQFSFLSPSPDFNFEFSGRWAPDILLE 120
           S+   Y      HP  P     PTP      PL   + LSP P         WA +ILLE
Sbjct: 61  SSKHYYPYQQQTHPSSPPPPPPPTPALLLIMPLSPPNSLSPLP---------WASEILLE 120

Query: 121 TARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASA 180
           TARAI+D+NSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSG+R YR L SA
Sbjct: 121 TARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGERCYRTLISA 180

Query: 181 SEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPT 240
           SEKTCSFESTRK++LKFQEVSPWTTFGHV+CNGA++EALEGESKLHI+DISNTYCTQWPT
Sbjct: 181 SEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEALEGESKLHIIDISNTYCTQWPT 240

Query: 241 LLEALATRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNA 300
           LLEALATRTD+TPHLRLTTVVT+K   G G A  QK+MKEIG RMEKFARLMGVPFKFN 
Sbjct: 241 LLEALATRTDETPHLRLTTVVTSKAGTG-GMAPVQKLMKEIGNRMEKFARLMGVPFKFNV 300

Query: 301 LYHSGDLSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIE 360
           L+HSGDLS L++A+LDIK+DEALA+NCVGAL SV A+ NRRD ++SSFR L PRIITV+E
Sbjct: 301 LHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVTAVGNRRDIVVSSFRRLHPRIITVVE 360

Query: 361 EEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVAC 420
           EEADLDVGVDG +F++GFQECLRWFRVY E+LDESF RTSNERLMLERAAGRAIVDLVAC
Sbjct: 361 EEADLDVGVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAAGRAIVDLVAC 420

Query: 421 SAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIF 480
             +ES+ERRETA+RW+QRLH +GF PV+FSDEVCDDVRALLRRYKEGW+MTQSSD AGIF
Sbjct: 421 PPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSMTQSSD-AGIF 480

Query: 481 LTWKEQPVVWASAWRP 491
           L+WK+QPVVW SAW+P
Sbjct: 481 LSWKDQPVVWTSAWKP 480

[Close]

BLAST of Cucsa.103160.1 vs. TrEMBL
Match: B9SH07_RICCO (Chitin-inducible gibberellin-responsive protein, putative OS=Ricinus communis GN=RCOM_0580340 PE=3 SV=1)

HSP 1 Score: 745.7 bits (1924), Expect = 3.5e-212
Identity = 370/514 (71.98%), Postives = 432/514 (84.05%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQ--QSYNSSRSTNSSSSRSSRQNQYHHYH---QQEDEECYNLLMDDE 60
           MDTLFRLV+LQ  Q  QS+N+S S  SSSSRSSRQN +HH+H   QQEDEEC+N  MD+E
Sbjct: 1   MDTLFRLVSLQQQQSDQSFNNSTSRTSSSSRSSRQNNHHHHHHQYQQEDEECFNFFMDEE 60

Query: 61  DFSSSSNSRQY---YNSNPYHPPHPSSTTTPTPP---------LDQFSFLSPSPDFNFEF 120
           DFSSSS+   Y   +     H    ++TTT T P          D FSF SPS D NF+F
Sbjct: 61  DFSSSSSKHYYPYHHQQQQQHTTATTTTTTVTTPNTTTSTLESTDHFSF-SPSHDLNFDF 120

Query: 121 SGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDS 180
           S RWA DILLETARAI+D+NSARVQQLMWMLNEL SPYGD D+KLA+YFLQALFSRMTDS
Sbjct: 121 SSRWATDILLETARAIADKNSARVQQLMWMLNELGSPYGDIDKKLASYFLQALFSRMTDS 180

Query: 181 GDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVD 240
           G+R YR LASAS+KTCSFESTRK++LKFQEVSPWTTFGHVSCNGA++EA EGESKLHI+D
Sbjct: 181 GERCYRTLASASDKTCSFESTRKMVLKFQEVSPWTTFGHVSCNGAIMEAFEGESKLHIID 240

Query: 241 ISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSGGTGAA-------ASQKVMKEIG 300
           ISNTYCTQWPTLLEALATRTD+TPHLRLTT+V +K +GG G         ++QKVMKEIG
Sbjct: 241 ISNTYCTQWPTLLEALATRTDETPHLRLTTIVASKTNGGGGGGGGNCGLVSAQKVMKEIG 300

Query: 301 TRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVGALRSVAAINNRRD 360
           +RMEKFARLMGVPFKFN ++H+GDL +L++++LDIKEDEALAINC+G+L SV  + NRRD
Sbjct: 301 SRMEKFARLMGVPFKFNVIHHAGDLCDLNLSELDIKEDEALAINCIGSLHSVTTVANRRD 360

Query: 361 FLISSFRSLRPRIITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNE 420
           ++IS+FR L+PRIIT++EEEADLDVG+DG++F+RGFQECLRWFRVYFE+L+ESFSRTSNE
Sbjct: 361 YIISNFRRLQPRIITIVEEEADLDVGIDGLDFVRGFQECLRWFRVYFESLEESFSRTSNE 420

Query: 421 RLMLERAAGRAIVDLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLR 480
           RLMLER+AGRAIVDLVAC  +ES+ERRE A+RW+ RLH  G+ P+ FSDEVCDDVRALLR
Sbjct: 421 RLMLERSAGRAIVDLVACQPSESIERREKATRWSSRLHACGYSPILFSDEVCDDVRALLR 480

Query: 481 RYKEGWAMTQSSDVAGIFLTWKEQPVVWASAWRP 491
           RYKEGW+MTQS   AGIFL WKEQPVVWASAW+P
Sbjct: 481 RYKEGWSMTQSGH-AGIFLCWKEQPVVWASAWKP 512

[Close]

BLAST of Cucsa.103160.1 vs. TAIR10
Match: AT4G37650.1 (AT4G37650.1 GRAS family transcription factor)

HSP 1 Score: 612.5 bits (1578), Expect = 2.3e-175
Identity = 319/531 (60.08%), Postives = 391/531 (73.63%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYN-----SSRSTNSSSSRSSRQNQYHHYHQQED--EECYNLLMD 60
           MDTLFRLV+LQ  QQS +     SS S  S+++  S Q  YH+   Q D  EEC+N  MD
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQSSLSRTSTTTTGSPQTAYHYNFPQNDVVEECFNFFMD 60

Query: 61  DEDFSSSS---NSRQYYNSNPYHPP-------HPSSTTTPTPPLDQFSFLSP-------- 120
           +ED SSSS   N   + N N Y+ P       HP++++TP+      +  SP        
Sbjct: 61  EEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGHHN 120

Query: 121 ----------SPDFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTD 180
                      P F+F  + +WA  +LLE ARA SD+++AR QQ++W LNELSSPYGDT+
Sbjct: 121 DPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTE 180

Query: 181 QKLAAYFLQALFSRMTDSGDRNYRAL--ASASEKTCSFESTRKVMLKFQEVSPWTTFGHV 240
           QKLA+YFLQALF+RMT SG+R YR +  A+A+EKTCSFESTRK +LKFQEVSPW TFGHV
Sbjct: 181 QKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHV 240

Query: 241 SCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSGGT 300
           + NGA++EA++GE+K+HIVDIS+T+CTQWPTLLEALATR+DDTPHLRLTTVV        
Sbjct: 241 AANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVAN-KFVN 300

Query: 301 GAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVG 360
              AS ++MKEIG RMEKFARLMGVPFKFN ++H GDLSE D+ +LD+K DE LAINCVG
Sbjct: 301 DQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVG 360

Query: 361 ALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADL---DVGVDGIEFMRGFQECLRWFR 420
           A+  +A+  + RD +ISSFR LRPRI+TV+EEEADL   + G    EF+RGF ECLRWFR
Sbjct: 361 AMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFR 420

Query: 421 VYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRWAQRLHGNGFGP 480
           V FE+ +ESF RTSNERLMLERAAGRAIVDLVAC  ++S ERRETA +W++R+  +GFG 
Sbjct: 421 VCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGA 480

Query: 481 VTFSDEVCDDVRALLRRYKEG-WAMTQSSDVAGIFLTWKEQPVVWASAWRP 491
           V +SDEV DDVRALLRRYKEG W+M Q  D AGIFL W++QPVVWASAWRP
Sbjct: 481 VGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWRP 530

[Close]

BLAST of Cucsa.103160.1 vs. TAIR10
Match: AT2G04890.1 (AT2G04890.1 SCARECROW-like 21)

HSP 1 Score: 199.9 bits (507), Expect = 3.6e-51
Identity = 120/384 (31.25%), Postives = 205/384 (53.39%), Query Frame = 1


Query: 111 ILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRA 170
           +L+  A+A+S+ N    +  M  L  + S  G+  Q+L AY L+ L +R+  SG   Y++
Sbjct: 53  VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112

Query: 171 LASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCT 230
           L S   ++  F S   V+    EV P+  FG++S NGA+ EA++ E ++HI+D      +
Sbjct: 113 LQSREPESYEFLSYVYVL---HEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGS 172

Query: 231 QWPTLLEALATRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPF 290
           QW  L++A A R    P++R+T V       G G+     V+  +  R+EK A+   VPF
Sbjct: 173 QWIALIQAFAARPGGAPNIRITGV-------GDGS-----VLVTVKKRLEKLAKKFDVPF 232

Query: 291 KFNALYHSGDLSELDMAKLDIKEDEALAINCVGALRSV----AAINNRRDFLISSFRSLR 350
           +FNA+  S    E+++  LD+++ EAL +N    L  +     ++ N RD L+   +SL 
Sbjct: 233 RFNAV--SRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLS 292

Query: 351 PRIITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLER-AAG 410
           P+++T++E+E + +       F+  F E L ++   FE++D    R   ER+ +E+    
Sbjct: 293 PKVVTLVEQECNTNTS----PFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMA 352

Query: 411 RAIVDLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMT 470
           R +V+++AC  AE +ER E   +W  R    GF P   S  +   +RALLR Y  G+A+ 
Sbjct: 353 RDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIE 412

Query: 471 QSSDVAGIFLTWKEQPVVWASAWR 490
           +      ++L W ++ +V + AW+
Sbjct: 413 ERD--GALYLGWMDRILVSSCAWK 413

[Close]

BLAST of Cucsa.103160.1 vs. TAIR10
Match: AT3G49950.1 (AT3G49950.1 GRAS family transcription factor)

HSP 1 Score: 193.4 bits (490), Expect = 3.4e-49
Identity = 131/424 (30.90%), Postives = 208/424 (49.06%), Query Frame = 1


Query: 82  TPTPPLDQFSFLSPSP-----DFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNE 141
           T T  L+   F SP P     D NF         +LL  A AI   ++A   Q++W+LN 
Sbjct: 2   TKTRILNPTRFPSPKPLRGCGDANF------MEQLLLHCATAIDSNDAALTHQILWVLNN 61

Query: 142 LSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSP 201
           ++ P GD+ Q+L + FL+AL SR           ++   +       +   +  F +++P
Sbjct: 62  IAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADELHRFSVVELAAFVDLTP 121

Query: 202 WTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVT 261
           W  FG ++ N A++ A+EG S +HIVD+S T+C Q PTL++A+A+R +  P L   TVV+
Sbjct: 122 WHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVS 181

Query: 262 TKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFN---ALYHSGDLSELDMAKL-DIK 321
           +          S    +E+G+++  FA    +  +F    + Y  G  S L   ++    
Sbjct: 182 SSDHFPPFINIS---YEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSS 241

Query: 322 EDEALAINCVGALRSV------AAINNRRDFLISSFRSLRPRIITVIEEEADLDVGVDGI 381
            +EAL +NC   LR +      ++ ++ R   +   RSL PRI+T+IEE+ DL       
Sbjct: 242 FNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDL----TSE 301

Query: 382 EFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETA 441
             +   +    +F + F+T D   +  S +R   E      I ++VA   AE VER ET 
Sbjct: 302 NLVNRLKSAFNYFWIPFDTTD---TFMSEQRRWYEAEISWKIENVVAKEGAERVERTETK 361

Query: 442 SRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQPVVWAS 491
            RW +R+    FG V   ++   DV+A+L  +  GW M +  D   + LTWK   VV+A+
Sbjct: 362 RRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFAT 409

[Close]

BLAST of Cucsa.103160.1 vs. TAIR10
Match: AT1G50600.1 (AT1G50600.1 scarecrow-like 5)

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-47
Identity = 118/386 (30.57%), Postives = 195/386 (50.52%), Query Frame = 1


Query: 111 ILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRA 170
           +L E A+A+ + +      L+  L ++ S  G+  Q+L AY L+ L +R+  SG   Y+A
Sbjct: 230 VLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKA 289

Query: 171 LASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCT 230
           L     K  +       M    E  P+  FG+ S NGA+ EA++ ES +HI+D   +   
Sbjct: 290 LRC---KDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGG 349

Query: 231 QWPTLLEALATRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPF 290
           QW +L+ AL  R    P++R+T +   + S      A Q  ++ +G R+ K A + GVPF
Sbjct: 350 QWVSLIRALGARPGGPPNVRITGIDDPRSS-----FARQGGLELVGQRLGKLAEMCGVPF 409

Query: 291 KFNALYHSGDL--SELDMAKLDIKEDEALAINCVGALRSV----AAINNRRDFLISSFRS 350
           +F    H   L  +E+++ KL ++  EALA+N    L  +      + N RD L+   + 
Sbjct: 410 EF----HGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKH 469

Query: 351 LRPRIITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLER-A 410
           L P ++T++E+EA+ +       F+  F E +  +   FE++D   +R   ER+ +E+  
Sbjct: 470 LSPNVVTLVEQEANTNTA----PFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHC 529

Query: 411 AGRAIVDLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWA 470
             R +V+L+AC   E  ER E   +W  R H  GF P   S  V   ++ LL  Y E + 
Sbjct: 530 LAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYT 589

Query: 471 MTQSSDVAGIFLTWKEQPVVWASAWR 490
           + +      ++L WK QP++ + AWR
Sbjct: 590 LEERD--GALYLGWKNQPLITSCAWR 597

[Close]

BLAST of Cucsa.103160.1 vs. TAIR10
Match: AT1G21450.1 (AT1G21450.1 SCARECROW-like 1)

HSP 1 Score: 177.9 bits (450), Expect = 1.5e-44
Identity = 135/451 (29.93%), Postives = 224/451 (49.67%), Query Frame = 1


Query: 49  NLLMDDEDFSSSSNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWA 108
           NL+  D ++S  + S Q+ +S     P  SS+      +     +S +            
Sbjct: 178 NLMEIDSEWSYQNESEQHQDS-----PKESSSADSNSHVSSKEVVSQATP---------- 237

Query: 109 PDILLETARAISDRNSARVQQLMWMLNELS---SPYGDTDQKLAAYFLQALFSRMTDSGD 168
             IL+  ARA+S+    ++++ + M+NEL    S  GD  Q++AAY ++ L +RM  SG 
Sbjct: 238 KQILISCARALSE---GKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGK 297

Query: 169 RNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDIS 228
             YRAL      +    +  +V+    EV P   FG ++ NGA++EA++GE ++HI+D  
Sbjct: 298 FIYRALKCKEPPSDERLAAMQVLF---EVCPCFKFGFLAANGAILEAIKGEEEVHIIDFD 357

Query: 229 NTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARL 288
                Q+ TL+ ++A      P LRLT +             S   ++ IG R+E+ A  
Sbjct: 358 INQGNQYMTLIRSIAELPGKRPRLRLTGI-----DDPESVQRSIGGLRIIGLRLEQLAED 417

Query: 289 MGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVGAL-----RSVAAINNRRDFLIS 348
            GV FKF A+      S +  + L  K  E L +N    L      SV  + N+RD L+ 
Sbjct: 418 NGVSFKFKAM--PSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTV-NQRDELLH 477

Query: 349 SFRSLRPRIITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLML 408
             +SL P+++TV+E+    DV  +   F   F E   ++   FE+LD +  R S ER+ +
Sbjct: 478 MVKSLNPKLVTVVEQ----DVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNV 537

Query: 409 ER-AAGRAIVDLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLR-RY 468
           ER    R IV++VAC   E +ER E A +W  R+   GF P   S +V ++++ L++ +Y
Sbjct: 538 ERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQY 593

Query: 469 KEGWAMTQSSDVAGIFLTWKEQPVVWASAWR 490
              + + +  ++  +   W+E+ ++ ASAWR
Sbjct: 598 CNKYKLKE--EMGELHFCWEEKSLIVASAWR 593

[Close]

BLAST of Cucsa.103160.1 vs. NCBI nr
Match: gi|449448226|ref|XP_004141867.1| (PREDICTED: protein SHORT-ROOT-like [Cucumis sativus])

HSP 1 Score: 990.3 bits (2559), Expect = 1.2e-285
Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS
Sbjct: 61  SNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS
Sbjct: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALA 240
           FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALA
Sbjct: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
           VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV
Sbjct: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480
           ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ
Sbjct: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480

Query: 481 PVVWASAWRP 491
           PVVWASAWRP
Sbjct: 481 PVVWASAWRP 490

[Close]

BLAST of Cucsa.103160.1 vs. NCBI nr
Match: gi|659079685|ref|XP_008440387.1| (PREDICTED: protein SHORT-ROOT [Cucumis melo])

HSP 1 Score: 987.3 bits (2551), Expect = 9.9e-285
Identity = 487/490 (99.39%), Postives = 489/490 (99.80%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYYN+NPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS
Sbjct: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS
Sbjct: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALA 240
           FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHI+DISNTYCTQWPTLLEALA
Sbjct: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTTVVTTKPSGGTG AASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTVVTTKPSGGTGTAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
           VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV
Sbjct: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480
           ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ
Sbjct: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480

Query: 481 PVVWASAWRP 491
           PVVWASAWRP
Sbjct: 481 PVVWASAWRP 490

[Close]

BLAST of Cucsa.103160.1 vs. NCBI nr
Match: gi|802645945|ref|XP_012079411.1| (PREDICTED: protein SHORT-ROOT [Jatropha curcas])

HSP 1 Score: 765.8 bits (1976), Expect = 4.7e-218
Identity = 382/501 (76.25%), Postives = 437/501 (87.23%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLV+LQ   QS+N+S S  SSSSRSSRQN +HHY QQEDEEC+N  MD+EDFSSS
Sbjct: 1   MDTLFRLVSLQQSDQSFNNSTSRTSSSSRSSRQNTHHHY-QQEDEECFNFFMDEEDFSSS 60

Query: 61  SNSRQYYNSNPYHPPHPSSTTTPTP---PLDQ--FSFLSPSPDFNFEFSGRWAPDILLET 120
           S SR Y+  +  H P P+ T TPTP   PL+   FSF SPS D NFEFSG+WA D+LLET
Sbjct: 61  S-SRHYFPYHHQHHPTPTPTPTPTPTTQPLESPDFSF-SPSHDLNFEFSGKWASDVLLET 120

Query: 121 ARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASAS 180
           ARAI+D+NSARVQQLMWMLNEL SPYGD D KLA+YFLQALFSRMTDSG+R YR LASAS
Sbjct: 121 ARAIADKNSARVQQLMWMLNELGSPYGDIDSKLASYFLQALFSRMTDSGERCYRTLASAS 180

Query: 181 EKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTL 240
           +KTCSFESTRK++LK+QEVSPWTTFGHVSCNGAL+EALEGESKLHI+DISNTYCTQWPTL
Sbjct: 181 DKTCSFESTRKMVLKYQEVSPWTTFGHVSCNGALMEALEGESKLHIIDISNTYCTQWPTL 240

Query: 241 LEALATRTDDTPHLRLTTVVTTKPS-----GGTGAAAS-QKVMKEIGTRMEKFARLMGVP 300
           LEALATRTD+TPHLRLTT+V TK       GG G  AS QKVMKEIG RMEKFARLMGVP
Sbjct: 241 LEALATRTDETPHLRLTTIVATKTGAAGGGGGNGGLASVQKVMKEIGNRMEKFARLMGVP 300

Query: 301 FKFNALYHSGDLSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRI 360
           FKFN ++H GDL +L++++LDIKEDEALAINCVG+L SV ++ NRRD++ISSFR L+PRI
Sbjct: 301 FKFNFIHHFGDLCDLNLSELDIKEDEALAINCVGSLHSVTSVGNRRDYIISSFRRLQPRI 360

Query: 361 ITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIV 420
           IT++EEEADLDVG+DG+EF+RGFQECLRWFRVYFE+L+E+FSRTSNERLMLER AGRAIV
Sbjct: 361 ITIVEEEADLDVGIDGLEFVRGFQECLRWFRVYFESLEETFSRTSNERLMLERVAGRAIV 420

Query: 421 DLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSD 480
           DLVAC+ ++S+ERRETA+RW+ RLH  GF PV+FSDEVCDDVRALLRRYKEGW+MTQ +D
Sbjct: 421 DLVACAPSDSIERRETATRWSSRLHACGFSPVSFSDEVCDDVRALLRRYKEGWSMTQCND 480

Query: 481 VAGIFLTWKEQPVVWASAWRP 491
            AGIFL WK+QPVVWASAWRP
Sbjct: 481 -AGIFLCWKDQPVVWASAWRP 497

[Close]

BLAST of Cucsa.103160.1 vs. NCBI nr
Match: gi|731396933|ref|XP_010652703.1| (PREDICTED: protein SHORT-ROOT isoform X1 [Vitis vinifera])

HSP 1 Score: 755.0 bits (1948), Expect = 8.3e-215
Identity = 389/506 (76.88%), Postives = 436/506 (86.17%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLV+LQSDQ SYNSSR+  SSSSRSSRQN  HH+H QEDEEC+N  MD+EDFSSS
Sbjct: 1   MDTLFRLVSLQSDQ-SYNSSRT--SSSSRSSRQN--HHHHHQEDEECFNFFMDEEDFSSS 60

Query: 61  SNSRQYYNSNPYHPP-HPSSTTTPTPPLD-----------QFSFLSPSPDFNFEF----S 120
           S S+ YY   PY    HPS+TTTPT               +FSF SP+ D + EF    S
Sbjct: 61  S-SKHYY---PYQQQTHPSTTTTPTTTNTSTPTHHAFEPTEFSF-SPARDLHLEFNSSAS 120

Query: 121 GRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSG 180
           G+WA +ILLETARAI+D+NSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSG
Sbjct: 121 GKWASEILLETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSG 180

Query: 181 DRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDI 240
           +R YR L SASEKTCSFESTRK++LKFQEVSPWTTFGHV+CNGA++EALEGESKLHI+DI
Sbjct: 181 ERCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEALEGESKLHIIDI 240

Query: 241 SNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFAR 300
           SNTYCTQWPTLLEALATRTD+TPHLRLTTVVT+K   G G A  QK+MKEIG RMEKFAR
Sbjct: 241 SNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAGTG-GMAPVQKLMKEIGNRMEKFAR 300

Query: 301 LMGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRS 360
           LMGVPFKFN L+HSGDLS L++A+LDIK+DEALA+NCVGAL SV A  NRRD ++SSFR 
Sbjct: 301 LMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVTAFGNRRDIVVSSFRR 360

Query: 361 LRPRIITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAA 420
           L PRIITV+EEEADLDVGVDG +F++GFQECLRWFRVY E+LDESF RTSNERLMLERAA
Sbjct: 361 LHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAA 420

Query: 421 GRAIVDLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAM 480
           GRAIVDLVAC  +ES+ERRETA+RW+QRLH +GF PV+FSDEVCDDVRALLRRYKEGW+M
Sbjct: 421 GRAIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSM 480

Query: 481 TQSSDVAGIFLTWKEQPVVWASAWRP 491
           TQSSD AGIFL+WK+QPVVW SAW+P
Sbjct: 481 TQSSD-AGIFLSWKDQPVVWTSAWKP 494

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BLAST of Cucsa.103160.1 vs. NCBI nr
Match: gi|359480541|ref|XP_003632486.1| (PREDICTED: protein SHORT-ROOT isoform X2 [Vitis vinifera])

HSP 1 Score: 753.4 bits (1944), Expect = 2.4e-214
Identity = 387/517 (74.85%), Postives = 434/517 (83.95%), Query Frame = 1


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLV+LQSDQ SYNSSR+  SSSSRSSRQN  HH+H QEDEEC+N  MD+EDFSSS
Sbjct: 1   MDTLFRLVSLQSDQ-SYNSSRT--SSSSRSSRQN--HHHHHQEDEECFNFFMDEEDFSSS 60

Query: 61  SNSRQYYNSNPYHPP------------HPSSTTTPTPPLD-----------QFSFLSPSP 120
           S+   Y      HP             HPS+TTTPT               +FSF SP+ 
Sbjct: 61  SSKHYYPYQQQTHPSTTTTPTTTNTQTHPSTTTTPTTTNTSTPTHHAFEPTEFSF-SPAR 120

Query: 121 DFNFEF----SGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFL 180
           D + EF    SG+WA +ILLETARAI+D+NSARVQQLMWMLNELSSPYGDTDQKLAAYFL
Sbjct: 121 DLHLEFNSSASGKWASEILLETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAAYFL 180

Query: 181 QALFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEAL 240
           QALFSRMTDSG+R YR L SASEKTCSFESTRK++LKFQEVSPWTTFGHV+CNGA++EAL
Sbjct: 181 QALFSRMTDSGERCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEAL 240

Query: 241 EGESKLHIVDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMK 300
           EGESKLHI+DISNTYCTQWPTLLEALATRTD+TPHLRLTTVVT+K   G G A  QK+MK
Sbjct: 241 EGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSKAGTG-GMAPVQKLMK 300

Query: 301 EIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVGALRSVAAINN 360
           EIG RMEKFARLMGVPFKFN L+HSGDLS L++A+LDIK+DEALA+NCVGAL SV A  N
Sbjct: 301 EIGNRMEKFARLMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVTAFGN 360

Query: 361 RRDFLISSFRSLRPRIITVIEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRT 420
           RRD ++SSFR L PRIITV+EEEADLDVGVDG +F++GFQECLRWFRVY E+LDESF RT
Sbjct: 361 RRDIVVSSFRRLHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVYLESLDESFPRT 420

Query: 421 SNERLMLERAAGRAIVDLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRA 480
           SNERLMLERAAGRAIVDLVAC  +ES+ERRETA+RW+QRLH +GF PV+FSDEVCDDVRA
Sbjct: 421 SNERLMLERAAGRAIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRA 480

Query: 481 LLRRYKEGWAMTQSSDVAGIFLTWKEQPVVWASAWRP 491
           LLRRYKEGW+MTQSSD AGIFL+WK+QPVVW SAW+P
Sbjct: 481 LLRRYKEGWSMTQSSD-AGIFLSWKDQPVVWTSAWKP 509

The following BLAST results are available for this feature:

BLAST of Cucsa.103160.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SHR_ARATH	4.2e-174	60.08	Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1	[more]
SHR1_ORYSI	2.6e-144	49.92	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica GN=SHR1 PE=3 SV=1	[more]
SHR1_ORYSJ	3.8e-143	49.75	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica GN=SHR1 PE=1 SV=2	[more]
SHR2_ORYSJ	1.3e-138	48.36	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=1	[more]
SHR2_ORYSI	2.8e-138	48.20	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2 PE=3 SV=1	[more]

BLAST of Cucsa.103160.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGH6_CUCSA	8.2e-286	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495620 PE=3 SV=1	[more]
A0A067KAN4_JATCU	3.3e-218	76.25	GRAS12 protein OS=Jatropha curcas GN=GRAS12 PE=2 SV=1	[more]
F6HSS8_VITVI	5.8e-215	76.88	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00030 PE=3 SV=...	[more]
A5AQ59_VITVI	1.2e-212	76.41	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001968 PE=3 SV=1	[more]
B9SH07_RICCO	3.5e-212	71.98	Chitin-inducible gibberellin-responsive protein, putative OS=Ricinus communis GN...	[more]

BLAST of Cucsa.103160.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37650.1	2.3e-175	60.08	GRAS family transcription factor	[more]
AT2G04890.1	3.6e-51	31.25	SCARECROW-like 21	[more]
AT3G49950.1	3.4e-49	30.90	GRAS family transcription factor	[more]
AT1G50600.1	1.4e-47	30.57	scarecrow-like 5	[more]
AT1G21450.1	1.5e-44	29.93	SCARECROW-like 1	[more]

BLAST of Cucsa.103160.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448226\|ref\|XP_004141867.1\|	1.2e-285	100.00	PREDICTED: protein SHORT-ROOT-like [Cucumis sativus]	[more]
gi\|659079685\|ref\|XP_008440387.1\|	9.9e-285	99.39	PREDICTED: protein SHORT-ROOT [Cucumis melo]	[more]
gi\|802645945\|ref\|XP_012079411.1\|	4.7e-218	76.25	PREDICTED: protein SHORT-ROOT [Jatropha curcas]	[more]
gi\|731396933\|ref\|XP_010652703.1\|	8.3e-215	76.88	PREDICTED: protein SHORT-ROOT isoform X1 [Vitis vinifera]	[more]
gi\|359480541\|ref\|XP_003632486.1\|	2.4e-214	74.85	PREDICTED: protein SHORT-ROOT isoform X2 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005202	TF_GRAS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0008356	asymmetric cell division
GO:0009956	radial pattern formation
GO:0048366	leaf development

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008356	asymmetric cell division
biological_process	GO:0048366	leaf development
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0045930	negative regulation of mitotic cell cycle
biological_process	GO:0032350	regulation of hormone metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.103160	Cucsa.103160	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.103160.1	Cucsa.103160.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.103160.1.five_prime_UTR.1	Cucsa.103160.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.103160.1.CDS.1	Cucsa.103160.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.103160.1.three_prime_UTR.1	Cucsa.103160.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 111..489 score: 1.2E
IPR005202	Transcription factor GRAS	PROFILE	PS50985	GRAS	coord: 82..468 score: 51
None	No IPR available	PANTHER	PTHR31636	FAMILY NOT NAMED	coord: 1..490 score: 1.3E