Cucsa.103020.5 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.103020.5
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Protein EARLY FLOWERING 3-like protein
Location	scaffold00927 : 1901041 .. 1904019 (-)
Sequence length	1121

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGAGAGGGAGAAGTGGATGTGAGAATTATATATACCAAGTACTTGGAATCTCGTGCACTGCTGGTGTTGCCTATTTCTGAAGCATATCTTTCACGAAAGTTGAAGGAGATTGGCTGGAATCTCACCCCAAACATCGCACAACTTTGGTACGTTTCTGTTCCTCTTCCTGTTCTTGTTCCCCTCTTCCTCGCTTTTAATCTTTCATTTTCTTTTCTTTATTTATATTCTTCATCACCTTCTGATTTTCACGGATTTATATATGTATGCTCCAACTCAATTCCATGTTCCATCTTTCTCTTTTCAAACGGATTACCATTTTCTGTAAGCTGCAATTCCTTGGAGGAGATGAAGTTTCTTCTTCTTCATCTTCCTCCGTTTCATCCATCTTTTTCGTCTTAGCTTTTCGCTTCCTTTTGCAGTATTCTAAACAAATGGCAAATGCATGCATACTCTGCAATTTCGTCTGCTGATCGGTAGTCGTTAAGATAACGGATTGTTTCAGGTAATTCCGAAATACCCTTTTGGTTTTTGTTACTTTCTTGATCGATCTGTGTGTTTAATTTAATGTTTGATCCAACTTCGGCATTGCAATCTTCAATTTGAGATGGTTTTGGTTTAATTTTCATTTGGGTTTTTTTTGGAATGTATGACAGAGTTTGGAACTATCAGTATTATGATTATTGTGGGGGTGGGGAGCGTGCATTAAGTGCTCGACGTAATGACTGAATGAGAAAGGGATATTTAGGATAGCAAACAAAAGACCAATGGGAAAGACTTTATCACATTCACAAGTTTTTATTTATTCCCACTGGGTTGTTCTGTTTCCTGTCCTCATTATTGCTGTTGGGTACCGAATTCATGATGGCGTTGGCCAGTGATACTTCAAGGAAATATAAAATTAATCAAATTGGGGACCTTTGGGTTTAGGGTATTATGTTTTTATCTTCATGATAGAATTTATTCCAGAACCAGGTTCTAAATTTCTGAACCACTTGATTGATCCAATTTTTTTAATGGACTTTCTTTTTCCAGACTGTTTTTAAGATTCAAGATTCAAGACTGCATCAGGTAAAAAAAAGTAAAAAAAGGGCTGAAATCCCAATGGAAAAGCTGCCTAAGGCATATGAAAAGGAGTACATGAGGATGGCTATGTTAAAGCACGAAGAAACATTTAAACAACAGGTATTTCTCCATTTTTTATCCTCAATTTGCATTCTATCCATTTTGTTTATAGAACCCAAAACAACCATGCAATTATTGAACTGTTAAAGATCCATATCGGCATTCCGAGTCTCTGATCACTGATTTTTCCAATCTGGCCATCATCTTTAACACAAATATTTATTCAACTTGATCCATAATTTTGATTCTATTTCCCCTCCTTTTCAGTTGATAAATGTGGGTGTTTTTAATTTTTTTGTGGCTCTATCTGAGAAAATTGCGGTGCAACACTTTAAAGTGAGGAGAAAGAGAAATCTAAGATTTGTGGTGGGTGGCTGGGCAATGGATGGATTGGATCGATAGTTAATTTCCAATTTGGGTTTTTGTCAAAAGTATCTCATAATCTTCCATGGCTACATCATTGAAAAATTTTATACAGATATTTTTTTTCTTTTTATCATAGTAAAAATGATTTTACCGTTTCAATGTCTAATTCATGGTTTCTCCTCAGAACCAAAGGGTGTCTTGATGAATTAACTGCATAAACTTATGTTTAATCCACATCTTCATTTCCCATTTTATCTCCAGATTTAACATTAATTTTATTGGGTTTTTTAGAAGAAAAAAAACATTTGTTATATTCACACGTTTAAATTTATTTTTATATTGAGTTAATTTACAAGCTTATCCTTGGGAAAAACAAGTTTTGATTTTTGAACATAAAGTATTTAAAGTATGTAAATGAAATTTGAATTTCTGTAGTTAACATACTCCTAACTATAAAAGCTATCTTATTATAATTTTGTGTTTAATAGATTTTGACAAATTAATTTTTCTTTCCTCGAACCCATGAGTCTATTTAACAAAAAAATTAAATCTAATTTTATTTCCGGTCAATTTGTTAATTTAAAAAAGTATTGAATGTGCAAGATGTCTATATTAAACATAAAATTTATATTTAATATTTTTTAAGATACAACATCTATTAATAAACACACCATTCACATATTAAACCTACAATTCGACCTTATATTTAATATAATTCATATTCTAAAGTTGGGAAGGAATATTGGCAGGTACAAGAACTACATCGACTTTATCGAACTCAAAAGACATTAATGAAGAACGTAGAGAAAAGCAGGGAAACTGAGAGTTGGGACAAAAGGAATGAGATATGTTTCAGACAAATCTATGAACAGGATGCAAAAAACTATTACAGATCAACTCGTACAACGAAACTAGACATGGAACAGCCTGCTGAAGATGAACCAGAAACCAACAATAATGGTGCTCGGCAGATCATAAACGAGACCGAACTCGAACTAACGCTTGGGCCTTCAAGTTACAATACTTCAGATTCAGGAACAACCACCTACTCTTCTTCTTCAACAGGGTCCAGCCATGATAGAAGATGTACGGACACAAAGCAAGTTAAAGGTCAAGAAATGGCGGCTTTGGGGGTAACTGAAAATTCCTCAGGCTGCCAAAATGGAAATAATAGAGGAGAGAAGAAGATGCTAGATTATCCTCCATGGCTTTTTCAAGTTGTGAGCCTTAACATGACTTAATTTCTCAAGGTATAAAGAAATTACCAATTCATTTTTCAATCAAACTATATGAGAACATCTTTGGTTGCTTCTCATTCACTAATCAACAGAGTGATTTGATGCTTTAGTTGTATTGATCTTTCTTCTACATCTTGGGTTGTATATTGAGATGTTGATGATGTGTATTACTTTGTAAATTTTTAACTTTGAGAACAGAATCACTTTTGAATTTCAAGGTATGATTCATGTGGATTGGGAGAGAGCTAG

mRNA sequence

agagagagagggagaaGTGGATGTGAGAATTATATATACCAAGTACTTGGAATCTCGTGCACTGCTGGTGTTGCCTATTTCTGAAGCATATCTTTCACGAAAGTTGAAGGAGATTGGCTGGAATCTCACCCCAAACATCGCACAACTTTGTATTCTAAACAAATGGCAAATGCATGCATACTCTGCAATTTCGTCTGCTGATCGGTAGTCGTTAAGATAACGGATTGTTTCAGACTGTTTTTAAGATTCAAGATTCAAGACTGCATCAGGTAAAAAAAAGTAAAAAAAGGGCTGAAATCCCAATGGAAAAGCTGCCTAAGGCATATGAAAAGGAGTACATGAGGATGGCTATGTTAAAGCACGAAGAAACATTTAAACAACAGGTACAAGAACTACATCGACTTTATCGAACTCAAAAGACATTAATGAAGAACGTAGAGAAAAGCAGGGAAACTGAGAGTTGGGACAAAAGGAATGAGATATGTTTCAGACAAATCTATGAACAGGATGCAAAAAACTATTACAGATCAACTCGTACAACGAAACTAGACATGGAACAGCCTGCTGAAGATGAACCAGAAACCAACAATAATGGTGCTCGGCAGATCATAAACGAGACCGAACTCGAACTAACGCTTGGGCCTTCAAGTTACAATACTTCAGATTCAGGAACAACCACCTACTCTTCTTCTTCAACAGGGTCCAGCCATGATAGAAGATGTACGGACACAAAGCAAGTTAAAGGTCAAGAAATGGCGGCTTTGGGGGTAACTGAAAATTCCTCAGGCTGCCAAAATGGAAATAATAGAGGAGAGAAGAAGATGCTAGATTATCCTCCATGGCTTTTTCAAGTTGTGAGCCTTAACATGACTTAATTTCTCAAGGTATAAAGAAATTACCAATTCATTTTTCAATCAAACTATATGAGAACATCTTTGGTTGCTTCTCATTCACTAATCAACAGAGTGATTTGATGCTTTAGTTGTATTGATCTTTCTTCTACATCTTGGGTTGTATATTGAGATGTTGATGATGTGTATTACTTTGTAAATTTTTAACTTTGAGAACAGAATCACTTTTGAATTTCAAGGTATGATTCATGTGGATTGGGAGAGAGCTAG

Coding sequence (CDS)

ATGGAAAAGCTGCCTAAGGCATATGAAAAGGAGTACATGAGGATGGCTATGTTAAAGCACGAAGAAACATTTAAACAACAGGTACAAGAACTACATCGACTTTATCGAACTCAAAAGACATTAATGAAGAACGTAGAGAAAAGCAGGGAAACTGAGAGTTGGGACAAAAGGAATGAGATATGTTTCAGACAAATCTATGAACAGGATGCAAAAAACTATTACAGATCAACTCGTACAACGAAACTAGACATGGAACAGCCTGCTGAAGATGAACCAGAAACCAACAATAATGGTGCTCGGCAGATCATAAACGAGACCGAACTCGAACTAACGCTTGGGCCTTCAAGTTACAATACTTCAGATTCAGGAACAACCACCTACTCTTCTTCTTCAACAGGGTCCAGCCATGATAGAAGATGTACGGACACAAAGCAAGTTAAAGGTCAAGAAATGGCGGCTTTGGGGGTAACTGAAAATTCCTCAGGCTGCCAAAATGGAAATAATAGAGGAGAGAAGAAGATGCTAGATTATCCTCCATGGCTTTTTCAAGTTGTGAGCCTTAACATGACTTAA

Protein sequence

MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEICFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNGARQIINETELELTLGPSSYNTSDSGTTTYSSSSTGSSHDRRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKMLDYPPWLFQVVSLNMT*

Homology

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BLAST of Cucsa.103020.5 vs. TrEMBL
Match: A0A0A0KIH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G494990 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-105
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI 60
           MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI
Sbjct: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI 60

Query: 61  CFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNGARQIINETELELTLGPSSYNTS 120
           CFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNGARQIINETELELTLGPSSYNTS
Sbjct: 61  CFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNGARQIINETELELTLGPSSYNTS 120

Query: 121 DSGTTTYSSSSTGSSHDRRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKMLDYPPW 180
           DSGTTTYSSSSTGSSHDRRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKMLDYPPW
Sbjct: 121 DSGTTTYSSSSTGSSHDRRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKMLDYPPW 180

Query: 181 LFQVVSLNMT 191
           LFQVVSLNMT
Sbjct: 181 LFQVVSLNMT 190

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BLAST of Cucsa.103020.5 vs. TrEMBL
Match: B9T4I8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0396190 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.7e-34
Identity = 98/233 (42.06%), Postives = 130/233 (55.79%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSR-----ETESWD 60
           MEK  K Y+KE+MRMAMLKHEETFK+QV ELHRLYR QK LM+N+   R       E W+
Sbjct: 1   MEKFLKPYDKEFMRMAMLKHEETFKEQVNELHRLYRIQKILMRNIGSKRPNTQGSQELWN 60

Query: 61  KRNEICFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNG----ARQIINETELELT 120
            +N I F Q                KLD+E+PA+ +    ++G    A +II+E+E+ELT
Sbjct: 61  SKNSISFAQ------------KSIMKLDLERPADQDYAVESSGDHRAALEIIDESEIELT 120

Query: 121 LGPSSYN-----------TSDSGTTTYSSSSTGSSHDRRCT---------DTKQVK---- 180
           LGPSSYN           TSDSG +++SSSSTGSSH  +           +TK+ +    
Sbjct: 121 LGPSSYNRGNRKKRETPLTSDSGPSSFSSSSTGSSHINKTASSLGHHKKMNTKKSEEASG 180

Query: 181 GQEMAALGVTENSSGCQNGNNRG----------EKKMLDYPPWLFQVVSLNMT 191
           G+E+  + V + + G     NR            ++ L  PPWLFQV+SLNMT
Sbjct: 181 GRELGIVQVPDMTLGNYQSENRTSSNIDVDEQLRQERLKQPPWLFQVLSLNMT 221

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BLAST of Cucsa.103020.5 vs. TrEMBL
Match: D7TT92_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00370 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.3e-33
Identity = 94/219 (42.92%), Postives = 126/219 (57.53%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKR--- 60
           MEKL   Y++EYM+MAMLKHE+TFK+QV ELHRLY  QK LMKN+E S       +R   
Sbjct: 1   MEKLLNPYDREYMKMAMLKHEQTFKEQVHELHRLYHRQKKLMKNIEVSGSNGQSQERLNS 60

Query: 61  NEICFRQIYEQDAKNYYRSTRTTKLDMEQPAED-EPETNNNGARQIINETELELTLGPSS 120
           N+I   QI  Q+           KLD+EQPAE+   E + +G  +I++E++LELTLGP S
Sbjct: 61  NDISMNQINHQEKPR-------MKLDLEQPAEEYNAELDGDGVLEIVDESKLELTLGPVS 120

Query: 121 YN---------TSDSGTTTYSSSSTGSSHDRRC---------TDTKQVKGQEMAALGVTE 180
           Y+         TSDSG  ++SSSSTGSSH +R          T  ++  G +     V +
Sbjct: 121 YSRRKKAETPLTSDSG-PSFSSSSTGSSHMKRTNSRTPKRIDTTKEESNGHDWGLFNVPD 180

Query: 181 NSSGCQNGNNRG-------EKKMLDYPPWLFQVVSLNMT 191
              G Q+G   G        ++ L+ PPW+ QV+SLNMT
Sbjct: 181 MKPGFQSGRKNGFHVDEQLRQERLNQPPWIVQVLSLNMT 211

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BLAST of Cucsa.103020.5 vs. TrEMBL
Match: A0A0B0NBC2_GOSAR (Protein EARLY FLOWERING 3-like protein OS=Gossypium arboreum GN=F383_15003 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-32
Identity = 92/218 (42.20%), Postives = 127/218 (58.26%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI 60
           M  L + Y+KEYMRMA+LKHEETFK+QV ELHRLYR QKTLMK++E SR   ++  +N  
Sbjct: 1   MGNLLRPYDKEYMRMAILKHEETFKEQVYELHRLYRIQKTLMKSMESSRPKGNFSLKNN- 60

Query: 61  CFRQIYEQDAKNYYRSTRTTKLDMEQPAED----------EPETNNNGARQIINETELEL 120
                Y     N + +TR T+LD+E PA +          EP+   N   + I+E+E+EL
Sbjct: 61  -----YHHGNINMHHNTR-TRLDLEHPAAEGDHRSNNVVAEPDYGRNTILESIDESEIEL 120

Query: 121 TLGPSSY---------NTSDSGTTTYSSSSTGSSHDRRCTDTKQ--VKGQEMAALGVTEN 180
           TLGP+ Y          TSDSG  ++SSSST SSH ++ + T+      ++M    VT+ 
Sbjct: 121 TLGPTRYVPRKKHGTPRTSDSG-PSFSSSSTESSHVKKTSTTRDDFTGNEQMGLFKVTDM 180

Query: 181 SSGCQNGNNRG-------EKKMLDYPPWLFQVVSLNMT 191
           + G  NG+           ++ L  PPWLFQV+S+NMT
Sbjct: 181 TFGYPNGSKNNTDLEEQLRQERLKQPPWLFQVLSMNMT 210

[Close]

BLAST of Cucsa.103020.5 vs. TrEMBL
Match: A0A0D2SPJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G221700 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.7e-32
Identity = 92/218 (42.20%), Postives = 128/218 (58.72%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI 60
           M  L + Y+KEYMRMA+LKHEETFK+QV ELHRLYR QKTLMK++E SR   ++  +N  
Sbjct: 1   MGNLLRPYDKEYMRMAILKHEETFKEQVYELHRLYRIQKTLMKSMESSRPKGNFSLKNN- 60

Query: 61  CFRQIYEQDAKNYYRSTRTTKLDMEQPAED----------EPETNNNGARQIINETELEL 120
                Y     N +++TR T+LD+E PA +          EP+   N   + I+E+E+EL
Sbjct: 61  -----YHHGNINMHQNTR-TRLDLEHPAAEGDHRSNNVVAEPDYGRNTILESIDESEIEL 120

Query: 121 TLGPSSY---------NTSDSGTTTYSSSSTGSSHDRRCTDTKQ--VKGQEMAALGVTEN 180
           TLGP+ Y          TSDSG  ++SSSST SSH ++ + T +     ++M    VT+ 
Sbjct: 121 TLGPTRYVPRKKHGTPRTSDSG-PSFSSSSTESSHVKKTSTTGEDFTGNEQMGLFKVTDM 180

Query: 181 SSGCQNGNNRG-------EKKMLDYPPWLFQVVSLNMT 191
           + G  NG+           ++ L  PPWLFQV+S+NMT
Sbjct: 181 TFGYPNGSKNNTDLEEQLRQERLKQPPWLFQVLSMNMT 210

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BLAST of Cucsa.103020.5 vs. TAIR10
Match: AT5G67390.1 (AT5G67390.1 unknown protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-20
Identity = 68/175 (38.86%), Postives = 95/175 (54.29%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI 60
           MEKL   Y+K+ M+MAMLKHEETFKQQV ELHRLY+ QK LMKN+E ++ T    K N +
Sbjct: 1   MEKLLNPYDKQCMKMAMLKHEETFKQQVYELHRLYQVQKILMKNMEINKFT---TKNNHV 60

Query: 61  CFRQIYEQDAKNYYRSTRTTKLD--MEQPAEDEPETNNNGARQIINETELELTLGPSSY- 120
                      N    T   ++D  +++PA      NN    +I++E+E+ELTLGPS Y 
Sbjct: 61  -----------NSGLGTFIRRVDNEIDRPANFSGGNNN---IEIMDESEIELTLGPSCYG 120

Query: 121 ---------------------NTSDSGTTTYSSSSTGSSHDRRCTDTKQVKGQEM 152
                                 + +SG  ++SSSSTGSS++      +QV+ + M
Sbjct: 121 GDEMMRMNKKKKKNSLPEMMDGSLNSGRRSFSSSSTGSSNNNNNNLEEQVRQERM 158

[Close]

BLAST of Cucsa.103020.5 vs. TAIR10
Match: AT5G57340.2 (AT5G57340.2 unknown protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10
Identity = 58/200 (29.00%), Postives = 90/200 (45.00%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI 60
           M++  +    E +R  M   E+ FKQQV+ELHR+Y TQK +M  ++    ++ W   N  
Sbjct: 72  MDRFLEKQNAESIRHTMQAQEDIFKQQVRELHRVYNTQKMMMTQLK--HRSQYWTVNN-- 131

Query: 61  CFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNGARQIINETELELTL--GPSSYN 120
                 +    +  R+   + +D+E        T ++     I E+ELELTL  G SS +
Sbjct: 132 ------KDQPGSRERTGSCSGIDLENVVRATQTTTDH-----IEESELELTLSIGLSSSS 191

Query: 121 TSDSGTTT----YSSSSTGSSHDRRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKM 180
           T+ + TT     YSS+++  S    C +  Q            + SSG     +      
Sbjct: 192 TTMTTTTNKDMDYSSTTSMRSSSDNCNN--QSNNNLYNNSNNNQESSGPNTPMSSSSTTS 251

Query: 181 LD----YPPWLFQVVSLNMT 191
           LD     P WLFQ +S+N T
Sbjct: 252 LDREKKRPHWLFQGLSINRT 254

[Close]

BLAST of Cucsa.103020.5 vs. TAIR10
Match: AT1G69360.1 (AT1G69360.1 Plant protein of unknown function (DUF863))

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08
Identity = 45/154 (29.22%), Postives = 68/154 (44.16%), Query Frame = 1


Query: 7   AYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETE----------SWDK 66
           +YE+++++  ML+HE  FK QV ELHRLYRTQK+LM  V+     +          S  K
Sbjct: 54  SYERDFLKQTMLEHEAVFKNQVYELHRLYRTQKSLMAEVKGKNFVDHLNNNEPTPGSGIK 113

Query: 67  R-----NEICFRQIYEQDAKNYYR----------STRTTKLDMEQPAED--EPETNNNGA 126
           R     N IC      QD  N  +            R T +D++ PA++    E +N   
Sbjct: 114 RGFLFGNSICGEGSTSQDC-NVGKDNKVLEVRPVKVRRTMIDLQLPADEYLHTEGDNTTC 173

Query: 127 RQIINETELELTLGPSSYNTSDSGTTTYSSSSTG 134
                  E+   +   S+    SG++    +S G
Sbjct: 174 PPYEQSKEVGENIFFESHRNDSSGSSLLMKNSNG 206

[Close]

BLAST of Cucsa.103020.5 vs. TAIR10
Match: AT1G26620.1 (AT1G26620.1 Plant protein of unknown function (DUF863))

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 1


Query: 8  YEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVE 47
          YEK++M+  ML+HE  FK QV ELHRLYR QK L++ V+
Sbjct: 13 YEKDFMKHTMLEHEAVFKNQVHELHRLYRVQKNLVEEVK 51

[Close]

BLAST of Cucsa.103020.5 vs. TAIR10
Match: AT1G13940.1 (AT1G13940.1 Plant protein of unknown function (DUF863))

HSP 1 Score: 52.4 bits (124), Expect = 3.6e-07
Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 1


Query: 8   YEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESW 55
           ++K+ +R  ML+HE  FK QV ELHR+YRTQK +M  +++ +  + W
Sbjct: 61  FDKDVVRRTMLEHEAVFKTQVLELHRVYRTQKDMMDELKRKQFNKEW 107

[Close]

BLAST of Cucsa.103020.5 vs. NCBI nr
Match: gi|778718594|ref|XP_004141880.2| (PREDICTED: uncharacterized protein LOC101207586 [Cucumis sativus])

HSP 1 Score: 389.8 bits (1000), Expect = 2.7e-105
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI 60
           MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI
Sbjct: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI 60

Query: 61  CFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNGARQIINETELELTLGPSSYNTS 120
           CFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNGARQIINETELELTLGPSSYNTS
Sbjct: 61  CFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNGARQIINETELELTLGPSSYNTS 120

Query: 121 DSGTTTYSSSSTGSSHDRRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKMLDYPPW 180
           DSGTTTYSSSSTGSSHDRRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKMLDYPPW
Sbjct: 121 DSGTTTYSSSSTGSSHDRRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKMLDYPPW 180

Query: 181 LFQVVSLNMT 191
           LFQVVSLNMT
Sbjct: 181 LFQVVSLNMT 190

[Close]

BLAST of Cucsa.103020.5 vs. NCBI nr
Match: gi|659079633|ref|XP_008440360.1| (PREDICTED: uncharacterized protein LOC103484836 [Cucumis melo])

HSP 1 Score: 370.2 bits (949), Expect = 2.2e-99
Identity = 185/191 (96.86%), Postives = 186/191 (97.38%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKRNEI 60
           MEKLPKAYEKEYMRMAMLKHEETFKQQV ELHRLYRTQKTLMKNVEKSRETESWDKRNEI
Sbjct: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNVEKSRETESWDKRNEI 60

Query: 61  CFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNGARQIINETELELTLGPSSYNTS 120
           CFRQIYEQDAKNYYRST TTKLDMEQPAEDEPET NNGA QIINETELELTLGPSSYNTS
Sbjct: 61  CFRQIYEQDAKNYYRSTHTTKLDMEQPAEDEPET-NNGAPQIINETELELTLGPSSYNTS 120

Query: 121 DSGTTTYSSSSTGSSHD-RRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKMLDYPP 180
           DSGTTTYSSSSTGSSH+ RRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKMLDYPP
Sbjct: 121 DSGTTTYSSSSTGSSHEGRRCTDTKQVKGQEMAALGVTENSSGCQNGNNRGEKKMLDYPP 180

Query: 181 WLFQVVSLNMT 191
           WLFQVVSLNMT
Sbjct: 181 WLFQVVSLNMT 190

[Close]

BLAST of Cucsa.103020.5 vs. NCBI nr
Match: gi|1009145433|ref|XP_015890334.1| (PREDICTED: uncharacterized protein LOC107424944 [Ziziphus jujuba])

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-39
Identity = 104/222 (46.85%), Postives = 138/222 (62.16%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRET-ESWDKRNE 60
           ME L K Y+KE+M+MAMLKHEETFK+QV ELHRLY+ QK LM+N+EK+R   E W  + E
Sbjct: 1   MENLFKPYDKEFMKMAMLKHEETFKEQVYELHRLYQIQKILMQNIEKNRSNQERWSIKKE 60

Query: 61  ICFRQIYEQDAKNYYRSTRTTKLDMEQPAEDE-PETNNNGARQIINETELELTLGPSSYN 120
           ICF QI +    + +      KLD+EQPAE+   +++ NG  ++I+E+E+ELTLGP+SYN
Sbjct: 61  ICFPQI-DHHHHHQHHDEAQRKLDLEQPAEEYIADSDGNGMVEMIDESEIELTLGPTSYN 120

Query: 121 ----------TSDSGTTTYSSSSTGSS-----------HDRRCTDTKQ--VKGQEMAALG 180
                     TSDSG  ++SSSSTGSS           H  R  DT +  V G E+  + 
Sbjct: 121 SRRRKSEAQLTSDSG-PSFSSSSTGSSHINRTISWTHHHHHRIRDTTRLGVNGCELGLVR 180

Query: 181 VTENSSGCQNGNNRG-------EKKMLDYPPWLFQVVSLNMT 191
           VT+ +SGCQN +           ++ L   PWLFQV+SLNMT
Sbjct: 181 VTDTTSGCQNSSKNNIDVEEQLRQERLKQSPWLFQVLSLNMT 220

[Close]

BLAST of Cucsa.103020.5 vs. NCBI nr
Match: gi|255584884|ref|XP_002533157.1| (PREDICTED: uncharacterized protein LOC8261659 [Ricinus communis])

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 98/233 (42.06%), Postives = 130/233 (55.79%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSR-----ETESWD 60
           MEK  K Y+KE+MRMAMLKHEETFK+QV ELHRLYR QK LM+N+   R       E W+
Sbjct: 1   MEKFLKPYDKEFMRMAMLKHEETFKEQVNELHRLYRIQKILMRNIGSKRPNTQGSQELWN 60

Query: 61  KRNEICFRQIYEQDAKNYYRSTRTTKLDMEQPAEDEPETNNNG----ARQIINETELELT 120
            +N I F Q                KLD+E+PA+ +    ++G    A +II+E+E+ELT
Sbjct: 61  SKNSISFAQ------------KSIMKLDLERPADQDYAVESSGDHRAALEIIDESEIELT 120

Query: 121 LGPSSYN-----------TSDSGTTTYSSSSTGSSHDRRCT---------DTKQVK---- 180
           LGPSSYN           TSDSG +++SSSSTGSSH  +           +TK+ +    
Sbjct: 121 LGPSSYNRGNRKKRETPLTSDSGPSSFSSSSTGSSHINKTASSLGHHKKMNTKKSEEASG 180

Query: 181 GQEMAALGVTENSSGCQNGNNRG----------EKKMLDYPPWLFQVVSLNMT 191
           G+E+  + V + + G     NR            ++ L  PPWLFQV+SLNMT
Sbjct: 181 GRELGIVQVPDMTLGNYQSENRTSSNIDVDEQLRQERLKQPPWLFQVLSLNMT 221

[Close]

BLAST of Cucsa.103020.5 vs. NCBI nr
Match: gi|296087340|emb|CBI33714.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 149.8 bits (377), Expect = 4.7e-33
Identity = 94/219 (42.92%), Postives = 126/219 (57.53%), Query Frame = 1


Query: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVQELHRLYRTQKTLMKNVEKSRETESWDKR--- 60
           MEKL   Y++EYM+MAMLKHE+TFK+QV ELHRLY  QK LMKN+E S       +R   
Sbjct: 1   MEKLLNPYDREYMKMAMLKHEQTFKEQVHELHRLYHRQKKLMKNIEVSGSNGQSQERLNS 60

Query: 61  NEICFRQIYEQDAKNYYRSTRTTKLDMEQPAED-EPETNNNGARQIINETELELTLGPSS 120
           N+I   QI  Q+           KLD+EQPAE+   E + +G  +I++E++LELTLGP S
Sbjct: 61  NDISMNQINHQEKPR-------MKLDLEQPAEEYNAELDGDGVLEIVDESKLELTLGPVS 120

Query: 121 YN---------TSDSGTTTYSSSSTGSSHDRRC---------TDTKQVKGQEMAALGVTE 180
           Y+         TSDSG  ++SSSSTGSSH +R          T  ++  G +     V +
Sbjct: 121 YSRRKKAETPLTSDSG-PSFSSSSTGSSHMKRTNSRTPKRIDTTKEESNGHDWGLFNVPD 180

Query: 181 NSSGCQNGNNRG-------EKKMLDYPPWLFQVVSLNMT 191
              G Q+G   G        ++ L+ PPW+ QV+SLNMT
Sbjct: 181 MKPGFQSGRKNGFHVDEQLRQERLNQPPWIVQVLSLNMT 211

The following BLAST results are available for this feature:

BLAST of Cucsa.103020.5 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIH1_CUCSA	1.9e-105	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G494990 PE=4 SV=1	[more]
B9T4I8_RICCO	8.7e-34	42.06	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0396190 PE=4 SV=1	[more]
D7TT92_VITVI	3.3e-33	42.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00370 PE=4 SV=...	[more]
A0A0B0NBC2_GOSAR	2.8e-32	42.20	Protein EARLY FLOWERING 3-like protein OS=Gossypium arboreum GN=F383_15003 PE=4 ...	[more]
A0A0D2SPJ8_GOSRA	3.7e-32	42.20	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G221700 PE=4 SV=1	[more]

BLAST of Cucsa.103020.5 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67390.1	1.7e-20	38.86	unknown protein	[more]
AT5G57340.2	2.1e-10	29.00	unknown protein	[more]
AT1G69360.1	2.5e-08	29.22	Plant protein of unknown function (DUF863)	[more]
AT1G26620.1	1.3e-07	58.97	Plant protein of unknown function (DUF863)	[more]
AT1G13940.1	3.6e-07	44.68	Plant protein of unknown function (DUF863)	[more]

BLAST of Cucsa.103020.5 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778718594\|ref\|XP_004141880.2\|	2.7e-105	100.00	PREDICTED: uncharacterized protein LOC101207586 [Cucumis sativus]	[more]
gi\|659079633\|ref\|XP_008440360.1\|	2.2e-99	96.86	PREDICTED: uncharacterized protein LOC103484836 [Cucumis melo]	[more]
gi\|1009145433\|ref\|XP_015890334.1\|	1.5e-39	46.85	PREDICTED: uncharacterized protein LOC107424944 [Ziziphus jujuba]	[more]
gi\|255584884\|ref\|XP_002533157.1\|	1.2e-33	42.06	PREDICTED: uncharacterized protein LOC8261659 [Ricinus communis]	[more]
gi\|296087340\|emb\|CBI33714.3\|	4.7e-33	42.92	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.103020	Cucsa.103020	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.103020.5	Cucsa.103020.5-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.103020.5.CDS.2	Cucsa.103020.5.CDS.2	CDS
Cucsa.103020.5.CDS.1	Cucsa.103020.5.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.103020.5.three_prime_UTR.1	Cucsa.103020.5.three_prime_UTR.1	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.103020.5.five_prime_UTR.3	Cucsa.103020.5.five_prime_UTR.3	five_prime_UTR
Cucsa.103020.5.five_prime_UTR.2	Cucsa.103020.5.five_prime_UTR.2	five_prime_UTR
Cucsa.103020.5.five_prime_UTR.1	Cucsa.103020.5.five_prime_UTR.1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33167	FAMILY NOT NAMED	coord: 1..190 score: 2.0