Cucsa.099410.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.099410.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Eukaryotic translation initiation factor 3 subunit A, putative
Location	scaffold00926 : 225084 .. 225938 (-)
Sequence length	855

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCTTTGCTGCAAACAAAAAGAAATCATTCCACATTCGTTCGAACAGTTTGCCTTCCAAGCCACACCCAGTTGTGGATGAAGTTGATGAACATCTCTGCAGATTGAATTCCTCTGAAGCCACTTCTACATCTTCTTCATTGTGCCAAAAATTTGATGGTCTTCAAGATTTACATGATAGTATTGACAAGTTGCTTCTTTTGCCACTCACCCGTCTAGCTCTTGTTGAAAACAAATCAATTGATGACCAATTAGAAGGATCTCTCAAACTCTTGGACTTGTGTGCTATGGCTAAGGATGCATTGTTTCAAACAAAAGAAAGCGCACATGAACTAGAGTCAACTTTGCGTAGAAGAAGAGGAGATGTCACCGTCGGTGATGTTCAAAAGTATTTGAACTCAAGGAAGATGATAAAGAAGGAAATCCACAAGACCTTGAAGGGAATGGAAAGATCAAGTTCTCAAAAAAGTGATGAAAGTTCAGAAATTGTTAGTATGTTAAAAGAGGCAGAAACTGTCACATATAACAACATTGAATCCTTGTTGTCATTTATAGCAGGATCAAAGTTGCCATCAAAGATCAGCAAATGGTCTTTCGTTTCTAAGTTCATGCAACCAAAGAAAGTGGTGAGCAAAGAAGATGACACAAGTGGAAATGAAGTAGAGATGGTGGATGCTGCATTATATTCAATCACCAGTCACAAATCTGATTGCATTGTGCAAATCGAAGATGTGCAAATCTTGCTGAGGAAATTAGAGTCAAGTATTCAAGACCTCGAAGAAGACCTTGAGAGTTTATATCGGCACCTTATCAAAAATAGGGTTGCCTTCCTTAACATTCTAAATCACTAA

mRNA sequence

ATGGATTCCTTTGCTGCAAACAAAAAGAAATCATTCCACATTCGTTCGAACAGTTTGCCTTCCAAGCCACACCCAGTTGTGGATGAAGTTGATGAACATCTCTGCAGATTGAATTCCTCTGAAGCCACTTCTACATCTTCTTCATTGTGCCAAAAATTTGATGGTCTTCAAGATTTACATGATAGTATTGACAAGTTGCTTCTTTTGCCACTCACCCGTCTAGCTCTTGTTGAAAACAAATCAATTGATGACCAATTAGAAGGATCTCTCAAACTCTTGGACTTGTGTGCTATGGCTAAGGATGCATTGTTTCAAACAAAAGAAAGCGCACATGAACTAGAGTCAACTTTGCGTAGAAGAAGAGGAGATGTCACCGTCGGTGATGTTCAAAAGTATTTGAACTCAAGGAAGATGATAAAGAAGGAAATCCACAAGACCTTGAAGGGAATGGAAAGATCAAGTTCTCAAAAAAGTGATGAAAGTTCAGAAATTGTTAGTATGTTAAAAGAGGCAGAAACTGTCACATATAACAACATTGAATCCTTGTTGTCATTTATAGCAGGATCAAAGTTGCCATCAAAGATCAGCAAATGGTCTTTCGTTTCTAAGTTCATGCAACCAAAGAAAGTGGTGAGCAAAGAAGATGACACAAGTGGAAATGAAGTAGAGATGGTGGATGCTGCATTATATTCAATCACCAGTCACAAATCTGATTGCATTGTGCAAATCGAAGATGTGCAAATCTTGCTGAGGAAATTAGAGTCAAGTATTCAAGACCTCGAAGAAGACCTTGAGAGTTTATATCGGCACCTTATCAAAAATAGGGTTGCCTTCCTTAACATTCTAAATCACTAA

Coding sequence (CDS)

ATGGATTCCTTTGCTGCAAACAAAAAGAAATCATTCCACATTCGTTCGAACAGTTTGCCTTCCAAGCCACACCCAGTTGTGGATGAAGTTGATGAACATCTCTGCAGATTGAATTCCTCTGAAGCCACTTCTACATCTTCTTCATTGTGCCAAAAATTTGATGGTCTTCAAGATTTACATGATAGTATTGACAAGTTGCTTCTTTTGCCACTCACCCGTCTAGCTCTTGTTGAAAACAAATCAATTGATGACCAATTAGAAGGATCTCTCAAACTCTTGGACTTGTGTGCTATGGCTAAGGATGCATTGTTTCAAACAAAAGAAAGCGCACATGAACTAGAGTCAACTTTGCGTAGAAGAAGAGGAGATGTCACCGTCGGTGATGTTCAAAAGTATTTGAACTCAAGGAAGATGATAAAGAAGGAAATCCACAAGACCTTGAAGGGAATGGAAAGATCAAGTTCTCAAAAAAGTGATGAAAGTTCAGAAATTGTTAGTATGTTAAAAGAGGCAGAAACTGTCACATATAACAACATTGAATCCTTGTTGTCATTTATAGCAGGATCAAAGTTGCCATCAAAGATCAGCAAATGGTCTTTCGTTTCTAAGTTCATGCAACCAAAGAAAGTGGTGAGCAAAGAAGATGACACAAGTGGAAATGAAGTAGAGATGGTGGATGCTGCATTATATTCAATCACCAGTCACAAATCTGATTGCATTGTGCAAATCGAAGATGTGCAAATCTTGCTGAGGAAATTAGAGTCAAGTATTCAAGACCTCGAAGAAGACCTTGAGAGTTTATATCGGCACCTTATCAAAAATAGGGTTGCCTTCCTTAACATTCTAAATCACTAA

Protein sequence

MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNSSEATSTSSSLCQKFDGLQDLHDSIDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRRRGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIESLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCIVQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH*

Homology

[Close]

BLAST of Cucsa.099410.1 vs. TrEMBL
Match: A0A0A0K2R6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G021920 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 5.3e-152
Identity = 282/284 (99.30%), Postives = 282/284 (99.30%), Query Frame = 1


Query: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNSSEATSTSSSLCQKFDGLQDLH 60
           MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRL SSEATSTSSSLCQKFDGLQDLH
Sbjct: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLKSSEATSTSSSLCQKFDGLQDLH 60

Query: 61  DSIDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRR 120
           D IDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRR
Sbjct: 61  DCIDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRR 120

Query: 121 RGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIE 180
           RGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIE
Sbjct: 121 RGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIE 180

Query: 181 SLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCI 240
           SLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCI
Sbjct: 181 SLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCI 240

Query: 241 VQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
           VQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH
Sbjct: 241 VQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 284

[Close]

BLAST of Cucsa.099410.1 vs. TrEMBL
Match: A0A0A0K1H9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023920 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 9.7e-114
Identity = 214/285 (75.09%), Postives = 242/285 (84.91%), Query Frame = 1


Query: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNSSE-ATSTSSSLCQKFDGLQDL 60
           MDSF+ N KKSFH+RSNSLPSKPHPVVDEV EHLCRL +SE ATS+SSSLCQK DGLQDL
Sbjct: 1   MDSFSVNSKKSFHVRSNSLPSKPHPVVDEVSEHLCRLKASEEATSSSSSLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRR 120
           HD IDKLLLLPLT  AL++NKS+DD LEGSLK+LD+CA+AKD L Q KESAHELES LRR
Sbjct: 61  HDCIDKLLLLPLTHQALIDNKSVDDLLEGSLKILDVCALAKDVLSQMKESAHELESALRR 120

Query: 121 RRGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNI 180
           R+  +   D+QKYLNSRKM+KK IH TLKGM++++ QKSDESSEIVS+LKEAETVTYN+I
Sbjct: 121 RKDGMV--DIQKYLNSRKMVKKAIHMTLKGMKKTNFQKSDESSEIVSLLKEAETVTYNSI 180

Query: 181 ESLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDC 240
           ESLL F+AG KLPSK+SKWS VS  MQPK+V  K+D T  NEVEMVDAAL SIT+ KSDC
Sbjct: 181 ESLLLFVAGPKLPSKMSKWSLVSMLMQPKRVACKDDSTDANEVEMVDAALNSITNRKSDC 240

Query: 241 IVQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
             Q EDVQ  LRKLE  I D+EEDLESLYR L+KNRV+FLNILNH
Sbjct: 241 FAQGEDVQNSLRKLELCIHDIEEDLESLYRRLVKNRVSFLNILNH 283

[Close]

BLAST of Cucsa.099410.1 vs. TrEMBL
Match: A0A0A0K2S2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023930 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.8e-92
Identity = 183/288 (63.54%), Postives = 226/288 (78.47%), Query Frame = 1


Query: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNSSEATSTSSSLCQKFDGLQDLH 60
           MDSFA N KK+ H+RSNSLPSKPHP+V++VDEHLCRL SSEATS++SSLC + + LQDLH
Sbjct: 1   MDSFAINSKKTLHVRSNSLPSKPHPIVNQVDEHLCRLKSSEATSSTSSLCHRLNSLQDLH 60

Query: 61  DSIDKLLLLPLTRLALV---ENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTL 120
           D IDKLLLLP T+  LV   +NK  DD LEGSLK+L+LC +AKDAL QTKE   ELES L
Sbjct: 61  DCIDKLLLLPFTQQTLVNESDNKWTDDFLEGSLKVLELCDIAKDALLQTKECVRELESVL 120

Query: 121 RRRRGDVTVG-DVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTY 180
           RRRR +  +  D+QK L+SRKMIKK + K LKG++ + SQ+S+E+S  VS+LKE E +T+
Sbjct: 121 RRRRDEAVISRDLQKCLSSRKMIKKAVQKALKGIKSNCSQQSEETSATVSLLKEVEAITF 180

Query: 181 NNIESLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHK 240
           + IES+LSFIAG KLP   S+WSFVSK +Q K+V +K++D   NEVEMVDA L +I SH 
Sbjct: 181 STIESVLSFIAGPKLP---SRWSFVSKLVQSKRVANKDEDAYENEVEMVDATLSAIASHT 240

Query: 241 SDCIVQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
           +D  V ++D    LRK+ESSI+DLEEDLESL RHLIKNRV+ LNILNH
Sbjct: 241 TDKSVNLQD---QLRKIESSIRDLEEDLESLQRHLIKNRVSLLNILNH 282

[Close]

BLAST of Cucsa.099410.1 vs. TrEMBL
Match: A0A0A0K0T5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023940 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.9e-85
Identity = 176/288 (61.11%), Postives = 213/288 (73.96%), Query Frame = 1


Query: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNSSEATSTSSSLCQKFDGLQDLH 60
           MDS   N KKS HIRSNSLPS+PHP+V EV+E+LCRL SSEA S++ SLC + + LQ LH
Sbjct: 1   MDSLDMNSKKSLHIRSNSLPSRPHPIVVEVEENLCRLKSSEAASSTFSLCYRLNSLQALH 60

Query: 61  DSIDKLLLLPLTRLALVE---NKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTL 120
           DSIDKLLLLP T+  LV     K  DD LEGSL+L+DLC +AKDAL QT+E  HELES L
Sbjct: 61  DSIDKLLLLPSTQQTLVHESGKKWADDLLEGSLRLIDLCDIAKDALLQTRECIHELESDL 120

Query: 121 RRRRGD-VTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTY 180
           RRR  + +   DVQK L SRKMIK+ + K LKG+ + SSQKS+ES   VS+LKE E +TY
Sbjct: 121 RRRSSERIITSDVQKCLKSRKMIKRTVQKALKGI-KISSQKSEESLATVSLLKEVEAITY 180

Query: 181 NNIESLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHK 240
           + +ES++S + G KLPSK S WS VSK +Q K+V S ++D + NEVEMV A L SI SH 
Sbjct: 181 STVESVMSNVVGPKLPSKFSPWSLVSKLVQSKRVASHDEDANANEVEMVGATLNSIASHT 240

Query: 241 SDCIVQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
           +D    ++D   LLRK ESSIQD EEDLESLYRHLIKNRV+ LNILN+
Sbjct: 241 TDKSFNLQD---LLRKSESSIQDFEEDLESLYRHLIKNRVSLLNILNN 284

[Close]

BLAST of Cucsa.099410.1 vs. TrEMBL
Match: A0A0A0K2T0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023980 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.1e-80
Identity = 170/293 (58.02%), Postives = 213/293 (72.70%), Query Frame = 1


Query: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNS-SEATSTSSSLCQKFDGLQDL 60
           MD+ A N K S H+RSNSLPSKPHP +D+VDE LCRL   S+ATS+SS LC K + LQDL
Sbjct: 1   MDASALNPKNSHHVRSNSLPSKPHPFIDQVDEQLCRLKEVSKATSSSSELCHKLNDLQDL 60

Query: 61  HDSIDKLLLLPLTRLALVEN---KSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELEST 120
           HDSID++LLL  T+  LVE    KS +D LEGS+KLLDLC +AKDAL Q+KE  HELES 
Sbjct: 61  HDSIDRMLLLSHTQHILVEESDKKSFNDLLEGSIKLLDLCDIAKDALLQSKECVHELESV 120

Query: 121 LRRRRGD--VTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETV 180
           LRRRRG       +VQK L+SRK+IKK I+K LK +E  S +KS  SS IVS LK+AE V
Sbjct: 121 LRRRRGGEMFIASEVQKGLSSRKLIKKTINKALKAIETKSCEKSQASSAIVSSLKQAEVV 180

Query: 181 TYNNIESLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITS 240
            YN ++SLLS++AG K  S  S WS VSK +Q K+V  + ++T+ NEV +VDAAL+SI S
Sbjct: 181 GYNVVKSLLSYLAGPKFSSNSSHWSLVSKLVQSKRVACEVEETNRNEVALVDAALHSIAS 240

Query: 241 H---KSDCIVQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
               KSD  VQ++++Q  L+   S+I+DLE DLE+LYRHLIK RV+ LNI N+
Sbjct: 241 QKTKKSDFRVQVDNLQNALKIFGSNIEDLEGDLEALYRHLIKTRVSLLNIYNY 293

[Close]

BLAST of Cucsa.099410.1 vs. TAIR10
Match: AT2G17080.1 (AT2G17080.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 217.6 bits (553), Expect = 9.8e-57
Identity = 128/279 (45.88%), Postives = 185/279 (66.31%), Query Frame = 1


Query: 11  SFHIRSNSLPSKPHPVVDEVDEHLCRLNSSE--ATSTSSSLCQKFDGLQDLHDSIDKLLL 70
           SFH+RSNS PS+ HP    VDE L RL SSE  ++S+SSS+CQ+ D LQ+LH+S+DKL+ 
Sbjct: 4   SFHVRSNSFPSRSHPQAAHVDEQLARLRSSEQASSSSSSSICQRLDNLQELHESLDKLIS 63

Query: 71  LPLTRLALVEN---KSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRRRGDVT 130
            P+T+ AL +    K+++  L+GSL++LDLC ++KDAL + KE   E++S LRR+RGD++
Sbjct: 64  RPVTQQALSQEHNKKAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSILRRKRGDLS 123

Query: 131 VGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIESLLSF 190
             +V+KYL SRK +KK   K  K ++   +Q  D + + +++  EAE +T +  +SLLS+
Sbjct: 124 -EEVKKYLTSRKSLKKSFQKVQKSLK--VTQAEDNNDDTLAVFGEAEAITLSLFDSLLSY 183

Query: 191 IAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCIVQIED 250
           ++GSK     SKWS VSK M  KKV  +  +   NE   VD      +  +S+  ++++D
Sbjct: 184 MSGSK---TCSKWSVVSKLMNKKKVTCEAQE---NEFTKVD------SEFQSEKTLKMDD 243

Query: 251 VQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
           VQ     LES IQDLE+ LESL + LIK RV+FLNIL H
Sbjct: 244 VQ----NLESCIQDLEDGLESLSKSLIKYRVSFLNILGH 263

[Close]

BLAST of Cucsa.099410.1 vs. TAIR10
Match: AT2G17070.1 (AT2G17070.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 215.7 bits (548), Expect = 3.7e-56
Identity = 130/279 (46.59%), Postives = 180/279 (64.52%), Query Frame = 1


Query: 11  SFHIRSNSLPSKPHPVVDEVDEHLCRLNSSEATSTSSS--LCQKFDGLQDLHDSIDKLLL 70
           SFH+RS+S PS PHP    VDE L RL SSE TSTSSS  +CQ+ D LQ+LH+S+DKL+ 
Sbjct: 4   SFHVRSHSYPSIPHPQAAHVDEQLARLRSSEETSTSSSSSICQRLDNLQELHESLDKLIR 63

Query: 71  LPLTRLALVENKS---IDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRRRGDVT 130
           LP+T+ AL + K+   ++  L+GSLK+LD+C ++KDAL Q KE   E++S LRR+RGD++
Sbjct: 64  LPVTQQALGQEKNKKDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQSILRRKRGDLS 123

Query: 131 VGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIESLLSF 190
            G+V+KYL SRK  KK   K  K ++  ++Q  D   + +++  EAE VT    +SL S+
Sbjct: 124 -GEVKKYLASRKSFKKTFQKVQKSLK--AAQAEDNKDKSLAVFGEAEAVTIAMFDSLFSY 183

Query: 191 IAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCIVQIED 250
           ++GSK     SKWS VSK M  KK+  +  +   NE   VD      +  +S+  +++ED
Sbjct: 184 MSGSK---TCSKWSVVSKLMNKKKITCEAQE---NEFTKVD------SEFQSEKTLKMED 243

Query: 251 VQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
           VQI    LES IQD E+ LESL + LIK RV+ LN   H
Sbjct: 244 VQI----LESCIQDFEDGLESLSKSLIKYRVSILNSFGH 263

[Close]

BLAST of Cucsa.099410.1 vs. TAIR10
Match: AT4G35200.1 (AT4G35200.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 206.5 bits (524), Expect = 2.2e-53
Identity = 127/271 (46.86%), Postives = 173/271 (63.84%), Query Frame = 1


Query: 11  SFHIRSNSLPSKPHPVVDEVDEHLCRLNSSEATSTSSSLCQKFDGLQDLHDSIDKLLLLP 70
           SFH+RSNS PS+ HP    VDE L RL SS++ S SSS+CQ+   LQDLHDS++K++ L 
Sbjct: 4   SFHVRSNSYPSRQHPQAAHVDEQLTRLRSSDSAS-SSSICQRLSNLQDLHDSLEKMIRLS 63

Query: 71  LTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRRRGDVTVGDVQ 130
           +T LAL +++ I+  L+GSL++LDLC +AKDA+ Q KE   E++S LRR+ GD++ G+V+
Sbjct: 64  VTNLALSQDQ-IEKLLDGSLRILDLCNIAKDAISQMKEGLMEIQSILRRKPGDLS-GEVK 123

Query: 131 KYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIESLLSFIAGSK 190
           KYL SRK +KK + K +K ++   S+ S  +S +V     AE VT    ESL SF++GSK
Sbjct: 124 KYLVSRKFLKKSLQKVIKSLKVCQSKDSTNASLVV--FGRAEAVTMALFESLFSFMSGSK 183

Query: 191 LPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCIVQIEDVQILL 250
                 KWS VSK M   KV     +   NE   +D+   S  S      +Q+EDVQ   
Sbjct: 184 ---ACGKWSLVSKMMSQNKVTC---EAEANEFTRIDSEFQSEKS------LQMEDVQ--- 243

Query: 251 RKLESSIQDLEEDLESLYRHLIKNRVAFLNI 282
             LES IQDLE+ +ESL + LIK RV+ LNI
Sbjct: 244 -NLESCIQDLEDGIESLSKSLIKYRVSILNI 253

[Close]

BLAST of Cucsa.099410.1 vs. TAIR10
Match: AT4G35210.1 (AT4G35210.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-50
Identity = 122/271 (45.02%), Postives = 171/271 (63.10%), Query Frame = 1


Query: 11  SFHIRSNSLPSKPHPVVDEVDEHLCRLNSSEATSTSSSLCQKFDGLQDLHDSIDKLLLLP 70
           SFH+RS+S PS+ HP    VDE L RL SS  T++SSS+CQ+   LQDLHDS++K++ L 
Sbjct: 4   SFHVRSSSYPSRQHPQAAHVDEQLTRLRSS-GTASSSSICQRLSNLQDLHDSLEKMIRLS 63

Query: 71  LTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRRRGDVTVGDVQ 130
           +T  AL +++ I+  L+GS+K+LDLC+++KD L Q KES  E++S +RR+RGD++  +V+
Sbjct: 64  VTNQALSQDQ-IEKLLDGSIKILDLCSISKDGLSQMKESLKEIQSIVRRKRGDLS-AEVK 123

Query: 131 KYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIESLLSFIAGSK 190
           KYL SRK +KK   K LK ++ S ++     ++ +++  EAETVT    ESL SF++GSK
Sbjct: 124 KYLASRKFLKKSFEKVLKSLKTSQNK-----NDALAVFGEAETVTIALFESLFSFMSGSK 183

Query: 191 LPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCIVQIEDVQILL 250
                 KWS VSK M   K      +   NE   VD    S  S      +Q+EDVQ   
Sbjct: 184 ---ACGKWSLVSKMMSQSKGTC---EAEANEFTRVDMEFQSEKS------LQMEDVQ--- 243

Query: 251 RKLESSIQDLEEDLESLYRHLIKNRVAFLNI 282
             LE  IQDLE+ + SL + LIK RV+ LNI
Sbjct: 244 -NLEICIQDLEDGIGSLSKSLIKYRVSILNI 250

[Close]

BLAST of Cucsa.099410.1 vs. TAIR10
Match: AT3G51400.1 (AT3G51400.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 114.4 bits (285), Expect = 1.2e-25
Identity = 83/284 (29.23%), Postives = 151/284 (53.17%), Query Frame = 1


Query: 11  SFHIRSNSLPSKPHPV-VDEVDEHLCRLNSSEATSTSSSLCQKFDGLQDLHDSIDKLLLL 70
           S+H+RS+SLP++ HP  ++++ + L +L + +  S S         L +L+DS+  L   
Sbjct: 4   SYHVRSSSLPARLHPHGLNQIQQLLNKLRADDNNSLSL--------LSNLYDSVSHLFND 63

Query: 71  PLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRRR--GDVTVG 130
             + L +  +      L+ SL  LDLC+  +D   + K+   +L S  RRRR  GD T+ 
Sbjct: 64  SPSSLLVPHHSFFTHLLDLSLLHLDLCSKLRDITCRIKDCLRDLRSAFRRRRHSGDSTIR 123

Query: 131 -DVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIESLLSFI 190
             V+ ++ SRK + K+I K L  ++++    S+ S  ++++L++  + T     ++L  +
Sbjct: 124 CHVKAFIRSRKAVHKDIAKLLLLLKQTGLSSSESSHPLITLLQQVCSQTCQTFRTVLLSL 183

Query: 191 AGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSG-------NEVEMVDAALYSITSHKSDC 250
           + +    + SKW+ V+K      V+     TSG       NE +M+D  L   +  +   
Sbjct: 184 STAVPKPRPSKWALVTKL-----VIKNVTSTSGQVRTGHRNEFQMMDEELRRFSMAEEIK 243

Query: 251 IVQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILN 284
             +I+ +   L K++ +++DLEE LE LYR +I+ RV+ LNIL+
Sbjct: 244 KDRIKSMITNLDKVDVAVEDLEESLERLYRRMIQARVSLLNILS 274

[Close]

BLAST of Cucsa.099410.1 vs. NCBI nr
Match: gi|778723180|ref|XP_011658620.1| (PREDICTED: uncharacterized protein LOC105436062 [Cucumis sativus])

HSP 1 Score: 545.0 bits (1403), Expect = 7.6e-152
Identity = 282/284 (99.30%), Postives = 282/284 (99.30%), Query Frame = 1


Query: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNSSEATSTSSSLCQKFDGLQDLH 60
           MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRL SSEATSTSSSLCQKFDGLQDLH
Sbjct: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLKSSEATSTSSSLCQKFDGLQDLH 60

Query: 61  DSIDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRR 120
           D IDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRR
Sbjct: 61  DCIDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRR 120

Query: 121 RGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIE 180
           RGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIE
Sbjct: 121 RGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIE 180

Query: 181 SLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCI 240
           SLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCI
Sbjct: 181 SLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCI 240

Query: 241 VQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
           VQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH
Sbjct: 241 VQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 284

[Close]

BLAST of Cucsa.099410.1 vs. NCBI nr
Match: gi|659094092|ref|XP_008447879.1| (PREDICTED: uncharacterized protein LOC103490232 [Cucumis melo])

HSP 1 Score: 520.4 bits (1339), Expect = 2.0e-144
Identity = 267/284 (94.01%), Postives = 274/284 (96.48%), Query Frame = 1


Query: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNSSEATSTSSSLCQKFDGLQDLH 60
           MDSFAAN+KKSFHIRSNSLPSKPHP+VDEVDEHLCRL SSEATSTSSSLCQK DGL DLH
Sbjct: 1   MDSFAANQKKSFHIRSNSLPSKPHPIVDEVDEHLCRLKSSEATSTSSSLCQKLDGLHDLH 60

Query: 61  DSIDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRRR 120
           D IDKLLLLPLTR ALV+ KS+DDQLEGSLKLLDLCA AKD LFQTKESAHELESTLRRR
Sbjct: 61  DCIDKLLLLPLTRQALVDKKSVDDQLEGSLKLLDLCATAKDVLFQTKESAHELESTLRRR 120

Query: 121 RGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNIE 180
           RGDVTVGDVQKYLNSRK+IKKEIHK LKGMERSSSQKSDESSEIVSMLKEAETVTYNNIE
Sbjct: 121 RGDVTVGDVQKYLNSRKIIKKEIHKALKGMERSSSQKSDESSEIVSMLKEAETVTYNNIE 180

Query: 181 SLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDCI 240
           SLLSFIAGSKLPSKISKWSFVSKF+QPKKVVSKE+DT GNEVEMVDAALYSITSHKSDCI
Sbjct: 181 SLLSFIAGSKLPSKISKWSFVSKFIQPKKVVSKEEDTRGNEVEMVDAALYSITSHKSDCI 240

Query: 241 VQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
           VQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH
Sbjct: 241 VQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 284

[Close]

BLAST of Cucsa.099410.1 vs. NCBI nr
Match: gi|659094523|ref|XP_008448107.1| (PREDICTED: uncharacterized protein LOC103490394 [Cucumis melo])

HSP 1 Score: 425.2 bits (1092), Expect = 8.7e-116
Identity = 221/285 (77.54%), Postives = 250/285 (87.72%), Query Frame = 1


Query: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNSSE-ATSTSSSLCQKFDGLQDL 60
           MDSFAAN KKSFHIRSNSLPSKPHPVVDE++E+L RL +SE ATS+SS+LCQK DGLQDL
Sbjct: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRR 120
           HDSIDKLLLLPLT  ALV+NKS+DD LEGSLK+LD+CA+AKD L Q KESAHELES LRR
Sbjct: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120

Query: 121 RRGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNI 180
           R+ D+   DVQKYLNSRKM+KK IHK LKGME++SSQKSDES EIVS+LKEAETVTYN+I
Sbjct: 121 RKDDMI--DVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSI 180

Query: 181 ESLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDC 240
           +SLL F+AG K PSK+S+WS VSK MQPKKV +KED   GNEVEMVDA+LYSIT HKSD 
Sbjct: 181 QSLLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDF 240

Query: 241 IVQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
            VQ+E+VQ  LRKLES I+DLEEDLE+LYR LIKNRV+FLNILNH
Sbjct: 241 FVQVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 283

[Close]

BLAST of Cucsa.099410.1 vs. NCBI nr
Match: gi|659094088|ref|XP_008447876.1| (PREDICTED: uncharacterized protein LOC103490230 [Cucumis melo])

HSP 1 Score: 424.9 bits (1091), Expect = 1.1e-115
Identity = 215/285 (75.44%), Postives = 252/285 (88.42%), Query Frame = 1


Query: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNSSE-ATSTSSSLCQKFDGLQDL 60
           MDSFAAN KKSFH+RSNSLPSKPHPVVDEV+E+LCRL +SE ATS+SSSLCQK DGLQDL
Sbjct: 1   MDSFAANSKKSFHVRSNSLPSKPHPVVDEVNENLCRLRASEEATSSSSSLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRR 120
           HDSIDKLLLLPLT  AL++NKS+D+ LEGSLK+LD+C +AKD L Q KESAHELES LRR
Sbjct: 61  HDSIDKLLLLPLTHQALIDNKSVDELLEGSLKILDMCDLAKDVLSQMKESAHELESALRR 120

Query: 121 RRGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNI 180
           R+ D    DVQKYLNSRKM+KK IH TLKGM++++ QKSDESSE VS+LKEAE++TYN+I
Sbjct: 121 RKDDKI--DVQKYLNSRKMVKKAIHMTLKGMKKTNFQKSDESSETVSLLKEAESITYNSI 180

Query: 181 ESLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDC 240
           ESLL F+AG K PSK+S+WS VSKF+QPKKVVSK++DT+GNEVEMVD AL+SIT HKSD 
Sbjct: 181 ESLLLFVAGPKCPSKMSRWSLVSKFIQPKKVVSKDEDTNGNEVEMVDGALHSITDHKSDF 240

Query: 241 IVQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
           +VQ+E+VQ  LRKLES I+D E+DLESLYR L+KNRV+FLNILNH
Sbjct: 241 LVQVENVQNSLRKLESCIRDFEDDLESLYRRLVKNRVSFLNILNH 283

[Close]

BLAST of Cucsa.099410.1 vs. NCBI nr
Match: gi|778723198|ref|XP_004144940.2| (PREDICTED: uncharacterized protein LOC101211103 [Cucumis sativus])

HSP 1 Score: 417.9 bits (1073), Expect = 1.4e-113
Identity = 214/285 (75.09%), Postives = 242/285 (84.91%), Query Frame = 1


Query: 1   MDSFAANKKKSFHIRSNSLPSKPHPVVDEVDEHLCRLNSSE-ATSTSSSLCQKFDGLQDL 60
           MDSF+ N KKSFH+RSNSLPSKPHPVVDEV EHLCRL +SE ATS+SSSLCQK DGLQDL
Sbjct: 1   MDSFSVNSKKSFHVRSNSLPSKPHPVVDEVSEHLCRLKASEEATSSSSSLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTRLALVENKSIDDQLEGSLKLLDLCAMAKDALFQTKESAHELESTLRR 120
           HD IDKLLLLPLT  AL++NKS+DD LEGSLK+LD+CA+AKD L Q KESAHELES LRR
Sbjct: 61  HDCIDKLLLLPLTHQALIDNKSVDDLLEGSLKILDVCALAKDVLSQMKESAHELESALRR 120

Query: 121 RRGDVTVGDVQKYLNSRKMIKKEIHKTLKGMERSSSQKSDESSEIVSMLKEAETVTYNNI 180
           R+  +   D+QKYLNSRKM+KK IH TLKGM++++ QKSDESSEIVS+LKEAETVTYN+I
Sbjct: 121 RKDGMV--DIQKYLNSRKMVKKAIHMTLKGMKKTNFQKSDESSEIVSLLKEAETVTYNSI 180

Query: 181 ESLLSFIAGSKLPSKISKWSFVSKFMQPKKVVSKEDDTSGNEVEMVDAALYSITSHKSDC 240
           ESLL F+AG KLPSK+SKWS VS  MQPK+V  K+D T  NEVEMVDAAL SIT+ KSDC
Sbjct: 181 ESLLLFVAGPKLPSKMSKWSLVSMLMQPKRVACKDDSTDANEVEMVDAALNSITNRKSDC 240

Query: 241 IVQIEDVQILLRKLESSIQDLEEDLESLYRHLIKNRVAFLNILNH 285
             Q EDVQ  LRKLE  I D+EEDLESLYR L+KNRV+FLNILNH
Sbjct: 241 FAQGEDVQNSLRKLELCIHDIEEDLESLYRRLVKNRVSFLNILNH 283

The following BLAST results are available for this feature:

BLAST of Cucsa.099410.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2R6_CUCSA	5.3e-152	99.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G021920 PE=4 SV=1	[more]
A0A0A0K1H9_CUCSA	9.7e-114	75.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023920 PE=4 SV=1	[more]
A0A0A0K2S2_CUCSA	2.8e-92	63.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023930 PE=4 SV=1	[more]
A0A0A0K0T5_CUCSA	1.9e-85	61.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023940 PE=4 SV=1	[more]
A0A0A0K2T0_CUCSA	4.1e-80	58.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023980 PE=4 SV=1	[more]

BLAST of Cucsa.099410.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17080.1	9.8e-57	45.88	Arabidopsis protein of unknown function (DUF241)	[more]
AT2G17070.1	3.7e-56	46.59	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35200.1	2.2e-53	46.86	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35210.1	1.4e-50	45.02	Arabidopsis protein of unknown function (DUF241)	[more]
AT3G51400.1	1.2e-25	29.23	Arabidopsis protein of unknown function (DUF241)	[more]

BLAST of Cucsa.099410.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778723180\|ref\|XP_011658620.1\|	7.6e-152	99.30	PREDICTED: uncharacterized protein LOC105436062 [Cucumis sativus]	[more]
gi\|659094092\|ref\|XP_008447879.1\|	2.0e-144	94.01	PREDICTED: uncharacterized protein LOC103490232 [Cucumis melo]	[more]
gi\|659094523\|ref\|XP_008448107.1\|	8.7e-116	77.54	PREDICTED: uncharacterized protein LOC103490394 [Cucumis melo]	[more]
gi\|659094088\|ref\|XP_008447876.1\|	1.1e-115	75.44	PREDICTED: uncharacterized protein LOC103490230 [Cucumis melo]	[more]
gi\|778723198\|ref\|XP_004144940.2\|	1.4e-113	75.09	PREDICTED: uncharacterized protein LOC101211103 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004320	DUF241_pln

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.099410	Cucsa.099410	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.099410.1	Cucsa.099410.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.099410.1.CDS.1	Cucsa.099410.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004320	Protein of unknown function DUF241, plant	PFAM	PF03087	DUF241	coord: 52..281 score: 8.4
None	No IPR available	unknown	Coil	Coil	coord: 243..270 scor
None	No IPR available	PANTHER	PTHR31509	FAMILY NOT NAMED	coord: 7..284 score: 3.8E
None	No IPR available	PANTHER	PTHR31509:SF12	SUBFAMILY NOT NAMED	coord: 7..284 score: 3.8E