Cucsa.091590.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTCCTGAAATGTTGCCTCAGCCTTTGTGCTCTTCTACACTGTTTGCTTCCTCTGTTACATTCGGTACACTGTGATGGTTAGCTCTCGCTCTCTCGCTCTCTCTCTCTCTCTCTCTAAGTTTATAAAGCTCATTAACTGCACAGAAAACAACACATTCTTACCCTAGATGATTCATGCAAACAGAACTTGAAATTCTCCAACTAGTTTTATGAGGTTGCACAAAAATATTTTTCTTTACAAACCCTTTTCTCAACATTTTCAAACTAAGATTTTTCAGTCACCTTTCCTGGCACGTTTATCAAAGAAATGCATGGTATGATAAAGTCAGTCGAACTTACAGCTCTTTAGTGAAAGATGAATGGCTGGCATTCTTTTCATATCTTCGTACACTGATGAATTAAACTTCAAACCTGACTACCTGCAGTTGATTTAGAAGAGCTTTTTAAAGGCTTTAACATCTACAGAAACTCAAAAGACAGGTCGGCTCTCGCCCAGAACTCCAAAGCAAAGTGTATAGCAGAACAAATTGCGAAGAACTGGTATAATAAATTGCCTTGCAGTGCTGCCATTGAGGGCGACGTCCTTTTGCCATTCAACCAGAGCCAACTTCCTATGTCACACTACTCAAGAAAGTGCGAAGTTAACCTCAATCATACAGTAGATGGGGTTATTTTACCAGTATACGTCCCTAACTCAGCAGATAAACTTATGCTTACTAATTGCACTCATTCTCAGGCTCCGAAGTATTTGGATAATGCAACTTACACAAGGGTAGGTCTTGCTACAAATGAAGACTGTTTAGTGATTGCTTTGGGTACAGATGCCATTAGTGGAAGCTATTCCGCTGGTCTATCTTTGGTTCCACATATTGGTTGGGTTTATTGGCTGGGATTTTTGTTTTTATCAATTCTTTGTTTTGGTGAAGGTGAAAAGCTTTTGTGTTCTTTCATTCTTTAAAATTGTTATCTACGATGTATGGTCCATGATTGACCCAAGGAGTCATGTAATGCTTTACACTGAACATCAGCATATTAATATAAAGGATATTTAGAAGGGGCAAACAAGTGTTCTCTTTTCTTTGTATTCTGTAACTGTGCATCTTTAG ATGGGTTTCCTGAAATGTTGCCTCAGCCTTTGTGCTCTTCTACACTGTTTGCTTCCTCTGTTACATTCGGTACACTGTGATGTTGATTTAGAAGAGCTTTTTAAAGGCTTTAACATCTACAGAAACTCAAAAGACAGGTCGGCTCTCGCCCAGAACTCCAAAGCAAAGTGTATAGCAGAACAAATTGCGAAGAACTGGTATAATAAATTGCCTTGCAGTGCTGCCATTGAGGGCGACGTCCTTTTGCCATTCAACCAGAGCCAACTTCCTATGTCACACTACTCAAGAAAGTGCGAAGTTAACCTCAATCATACAGTAGATGGGGTTATTTTACCAGTATACGTCCCTAACTCAGCAGATAAACTTATGCTTACTAATTGCACTCATTCTCAGGCTCCGAAGTATTTGGATAATGCAACTTACACAAGGGTAGGTCTTGCTACAAATGAAGACTGTTTAGTGATTGCTTTGGGTACAGATGCCATTAGTGGAAGCTATTCCGCTGGTCTATCTTTGGTTCCACATATTGGTTGGAAGGGGCAAACAAGTGTTCTCTTTTCTTTGTATTCTGTAACTGTGCATCTTTAG ATGGGTTTCCTGAAATGTTGCCTCAGCCTTTGTGCTCTTCTACACTGTTTGCTTCCTCTGTTACATTCGGTACACTGTGATGTTGATTTAGAAGAGCTTTTTAAAGGCTTTAACATCTACAGAAACTCAAAAGACAGGTCGGCTCTCGCCCAGAACTCCAAAGCAAAGTGTATAGCAGAACAAATTGCGAAGAACTGGTATAATAAATTGCCTTGCAGTGCTGCCATTGAGGGCGACGTCCTTTTGCCATTCAACCAGAGCCAACTTCCTATGTCACACTACTCAAGAAAGTGCGAAGTTAACCTCAATCATACAGTAGATGGGGTTATTTTACCAGTATACGTCCCTAACTCAGCAGATAAACTTATGCTTACTAATTGCACTCATTCTCAGGCTCCGAAGTATTTGGATAATGCAACTTACACAAGGGTAGGTCTTGCTACAAATGAAGACTGTTTAGTGATTGCTTTGGGTACAGATGCCATTAGTGGAAGCTATTCCGCTGGTCTATCTTTGGTTCCACATATTGGTTGGAAGGGGCAAACAAGTGTTCTCTTTTCTTTGTATTCTGTAACTGTGCATCTTTAG MGFLKCCLSLCALLHCLLPLLHSVHCDVDLEELFKGFNIYRNSKDRSALAQNSKAKCIAEQIAKNWYNKLPCSAAIEGDVLLPFNQSQLPMSHYSRKCEVNLNHTVDGVILPVYVPNSADKLMLTNCTHSQAPKYLDNATYTRVGLATNEDCLVIALGTDAISGSYSAGLSLVPHIGWKGQTSVLFSLYSVTVHL*
BLAST of Cucsa.091590.1 vs. Swiss-Prot
Match: UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06035 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.9e-17 Identity = 58/164 (35.37%), Postives = 91/164 (55.49%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. Swiss-Prot
Match: UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19250 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15 Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. Swiss-Prot
Match: UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19240 PE=2 SV=2) HSP 1 Score: 58.5 bits (140), Expect = 9.2e-08 Identity = 50/159 (31.45%), Postives = 76/159 (47.80%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. TrEMBL
Match: A0A0A0LGC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021640 PE=4 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 5.5e-100 Identity = 180/186 (96.77%), Postives = 180/186 (96.77%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. TrEMBL
Match: A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 2.6e-89 Identity = 165/179 (92.18%), Postives = 170/179 (94.97%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. TrEMBL
Match: A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.1e-29 Identity = 69/169 (40.83%), Postives = 103/169 (60.95%), Query Frame = 1
HSP 2 Score: 121.7 bits (304), Expect = 9.9e-25 Identity = 71/179 (39.66%), Postives = 101/179 (56.42%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. TrEMBL
Match: M5W0Y4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014919mg PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.4e-23 Identity = 67/173 (38.73%), Postives = 103/173 (59.54%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. TrEMBL
Match: D7U1Z4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0128g00350 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.6e-21 Identity = 56/157 (35.67%), Postives = 96/157 (61.15%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. TAIR10
Match: AT3G06035.1 (AT3G06035.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 90.1 bits (222), Expect = 1.6e-18 Identity = 58/164 (35.37%), Postives = 91/164 (55.49%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. TAIR10
Match: AT5G19250.1 (AT5G19250.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 84.7 bits (208), Expect = 6.8e-17 Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. TAIR10
Match: AT1G54860.1 (AT1G54860.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15 Identity = 45/146 (30.82%), Postives = 82/146 (56.16%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. TAIR10
Match: AT5G19240.1 (AT5G19240.1 Glycoprotein membrane precursor GPI-anchored) HSP 1 Score: 58.5 bits (140), Expect = 5.2e-09 Identity = 50/159 (31.45%), Postives = 76/159 (47.80%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. NCBI nr
Match: gi|700205774|gb|KGN60893.1| (hypothetical protein Csa_2G021640 [Cucumis sativus]) HSP 1 Score: 371.7 bits (953), Expect = 7.9e-100 Identity = 180/186 (96.77%), Postives = 180/186 (96.77%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. NCBI nr
Match: gi|659070380|ref|XP_008454795.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo]) HSP 1 Score: 336.7 bits (862), Expect = 2.8e-89 Identity = 167/187 (89.30%), Postives = 172/187 (91.98%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. NCBI nr
Match: gi|150036257|gb|ABR67420.1| (GPI-anchored protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 336.3 bits (861), Expect = 3.7e-89 Identity = 165/179 (92.18%), Postives = 170/179 (94.97%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. NCBI nr
Match: gi|150036257|gb|ABR67420.1| (GPI-anchored protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 136.0 bits (341), Expect = 7.3e-29 Identity = 69/169 (40.83%), Postives = 103/169 (60.95%), Query Frame = 1
HSP 2 Score: 136.0 bits (341), Expect = 7.3e-29 Identity = 69/169 (40.83%), Postives = 103/169 (60.95%), Query Frame = 1
BLAST of Cucsa.091590.1 vs. NCBI nr
Match: gi|703135332|ref|XP_010105845.1| (hypothetical protein L484_002452 [Morus notabilis]) HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24 Identity = 71/179 (39.66%), Postives = 101/179 (56.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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