Cucsa.090220.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.090220.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	26S proteasome non-ATPase regulatory subunit 9
Location	scaffold00894 : 1579946 .. 1584205 (+)
Sequence length	1024

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCTGAGTCACGGCTTTGAAGCCTCAATTATCGAAGAAGAAAGAAGCTTTTGTCAATCGGAAAAAATGGTGGCTTCTAATTTGAAATCGGAGACTATGGATCTAATGCAGAAGAGGAGCGCTATCGAGGCCCAGATGGATGCCATCATTTCTCGCCTTTGTCAGCCCGGCGGTCCTGGACTCTCCGGAAATCTCGTCGACTCTGAGGTGATTACAACACCTTCTTTTCCCTCCATTTCCATGATCGAACGAAATTTCTTGTGCTGGAGGTGATTGGGCTTTGTATTCGAACCCCCAAGTGAAAATTTTCGATTTTGGTAGTTTTGTCATGCTTGATTACAACTCTTTTCCTTTGAGATTTTGTGGGGTACCCTATAGCTAATAAGCACAATTGCTTTTTTTTTtATTATTATTATTCTTTTAGTTTCTGTGCTATGCTGTATGAAGACTTATACATGCTCAATTGAAAATTGATTGGATTTTGATGTTGGAAAAGTTTGGTATATTGACCATGAACGAAGTTGGAATTTGTTTGGATTGCAAAAATATGAACAATGCTTGATTTTCTGTGGTGTGGATGATAGGTTTTTGGTAAGTCTGAGTCCAGGAGAAGTTTGATTGATTGTGTTGTAGTGCCTTGTTTAGATTTAGTTTGTTTGAAACTTACTTTGTACTCTAATTTTTAATATCTTTTGCAGGGGTTTCCTCGTTCGGATATAGATATTCCAGTTATTCGGTCTGAGCGTGGTCGGCTTACTGGTAGGATGCTAATCTTTTTCATTATACACAGTTTTAGTTATGCTGTACTAAAAGGTGTCTTAATTGTAACTTTGAGAGTAGAAAATAAATTATTTTTAGAAACCGAGCTTTGGTGAAGAGAAACGAAAGAACCTAGAAGAACGTAAAAGAATTAGCACAATGAAGTAACCTCGCAAACTTCAAAAAGAAATTTTGATCCATAAAAATGAAATTTGTCAAAGTCCTTCACCACCAAAGCTCAATCGGATGATAAAATTTAATACTTTTTCACTACTTCTTTCGGATCTCTCACTCTCTATAAGAATTCTAGAATTCATCTCAAGTGAAATGCCCGAAATAATAGAAAAATGAGCATGCCATAGGATTTTGGCCGTCTCCCTCAATCATAAGGCCGCATTCTCTACTTCATGACGTATACTGTAAAACACTCAGGAACCCGTACCAAATTGACTAAGCTTAGTAGCACCTCCACACAATATGTTCAAGGTCCTCAAATGCTACTCTGCATAGAGGGGAAAAAGGAGTAGTGCTGCTGCATCCAATCCTAATTATTGCCTTTCCCATGGAAGACTGAGTTGCTTTTCAAAAAACTTAACCTTCTAAGAAATTTTGCCTTCCAAAGCAAGACAAACAATGGGGAGTGACAGGGGGAAGCAAGGAAACAGTGAAAAGATAGAAGGAAGAACTGGATGAGAAGCCCTAAGATAGGCACAGGGTCTAGGAACACCATTCTTCCATGAAGATTTCAAAAGTAAAAGAAAAGCAGTGACAGTGGAACACAAAAAGTTTTAGCAAGGGGGAGTACAAAATTGATTAAGTTGGTTCTAAGTCTCTAGTGATGTCGCTTTAATCATAGAGTTATTTGCCTTATTGGATACTATAATACAAGAAATTTTAAGTTGTCATTTGGATCGTCCCAAGTTGGAAATGTGCTATTTTCTATTCTGTGGCTTAGGTGTATAAGGATTTGAATCGAAATGTAAAATTTATTCATATTCCTGTTATTTCCCATAGTGAGGTGTTACTTCTGAATGCTCATGTAATTCCATTGTCTACTTGTCTTTTCATTTGGACGTTCTGTTACTTATCCAAAAATTAAAAAaGAAAAaGAAAATCATTTTGGATGATGATATTTTTTTtAAAAAGAGAACATCGAGTTTCATCGAGAAAAGAAATGAAAGAACACATGGGCATACAAAAAACCAAAAGTCTACAAAAGAGGGGAGCCCCACAAGAAGGGACTCCAACACCATGTGAATTTTTTATGGGATTCAAATGGTAGATAAGAAACTCACTATTAATGTCTTAATGATGCTAAAATTTACTTATTTTCTTCAAGCATATCACTAAAAATGAAGATCAATTTACTACTTTTCTCACATATATTATTGTGTTTCAAAGTGCTAACCTGCTATTCTATCTTTTTAGAGCTGAGGAATGACCACACTGAAATCACAGAAAAGATAAATCAGAACATTCAAGTCTTGCATTCTGCAAAGCCTGCTTGTGGCTTGTCGCTCTCTAGGAATGCAGGTATTTCTGAGGTAGATGTTATGCTATGGAATGACACTTATCGTTTATCCTTGCACATTTCAGTTCCAGCTGCGCTAGAATTTCTTTTCCATTTTTAATTAATTCAGGTAGAGTTAACCCTTGTACACACATAGTTTGTAGCTTGAATCCCCTTTTGTGCAGTCTTCTCTTTTTGTATGCTCTTCTAATGTTCAGTTTCTTATCATCAAATATACACTCATGTTTACAGTTTGGATTCTGCTTCATTTTACAAAGAGGTTAGAATTGGTCTTCATGAGTAATTCCTTCGGTCGGTTAAATTTCCATAATCTTATGTATTAAGTTATTAACGAGCCATTCCAATCCCAAAAAATCTGTAACAAAGGGTTTAAGTTGTTAGGACTCGATAGTAGCAACTGAACTCACTACACTAGACACTAGACCTAGAATTAAAACAAATAATGTGGTTTGTGAGGCGTGAGATGTCTTACAGATTATAAAAAGTTAATTCTCAGAAATATGGAAGTTAGCGTGTCATCAACATTTTTTCCTGACGTTTTCCTTCCCTGATTCTTGCCAATTGGTACTCTGTGTTGCCTACCTGGCTTTGTGGGAGAATTTTTATCTTCCCTGACGTTCATGGTTTTCCATGTCTTTGTCATGAATTTTGTTTCATAAAGAAACAAAAAGTAACAGTAAATCAATAATGATAACCAAAATATTCAAGCCATCACATGCCTTCCAATTTCAAAAGTACACATATCATATACTAGAGTCACCTGCTGATATCTCTATTGAAAATTGTCTCAAGATGCTTGTGCCATTTGAATAATCATCATGGGATCAATCCTGATTCTACCTATCGCATTCATTTATTAGGGAATACTGAGGGTTCAATTGGCCAAAGATCATCTATCACAGCTGTTACATCCCCATCCTCAAATGGTATTTCTCAGAGGGACTCTTCCACTGCCATGGACATAGATGCAAATGGAAGCATACCTTTTGCATTGGTTGATGAAATAGCCGATGCATCGCCAGCAGCAGATGATGGATTACAACTAGGCGACCAAGTTCTTAAATTTGGGAATGTAGAGGGCGGTGATGATCTATTGCGTAGGCTTGCCTCTGAAGCACAGAATAATCAAGGTCGTGCAATACCTGTTGTGGTTATGAGGCATGGTACTCCGGTCAATTTGACTGTGACACCCAGATCATGGCAAGGCCGAGGTCTTCTTGGGTATGTGCATTGCTTGTCCTTTTCACACTAGCTTAATTCTCATTTTCTCGATTTAATTGAGAAGACTAAATTAGTAACACAATTTTTTATGTAAAAAaTGCTCTGTGAAATGTAAAGAAATTCCCCTTTTTCACTTGCCATCCGACACAAAGTTTCTGAAAATGAAGGGCATGTTTAGGAATGATTTTTAAATGATTAAAATGCTTTTTGTTATGTTTAAAATCACTCCAAAACGCATCTTTAGTCATTCAATTTAACGTTTAATTCTATACTTTTAATTGCATTTTCTTGTACAATTGAAATTGATTTTGAATGATTAAACGTATTTTTGGAGTGATTTTAAACACACATCCACACACGGACAGGCACACCAATCTTTTCTCATGGACTTCTGAGTTTTGGTAGTTCCCTTGAGAATGATCTGCTTGGCTGACCATTGGCACTGTTGGGTGCTTGCAGATGCCATTTTCGGATGATGTAGCTGGGCTCTATCCACAAGCTCAACCTGCCATGGGTTGTTCATCTTTCTACGTAACTCTCTTCGTGTTCTTCACTTAATTTACTAGTTTAATTCTAGGTTGCACACATGTTTAACAAATTTCTCTTAACTAGTCTGGATTTATAGCGATTGCCCCACCTAGCCCTTACTTTGTTGTCACTTGGCTTGAATACTCTGTAAATTGAAATAACATATGATAAGTTACTCTTTTTTATGCTATTTTAGTCATGTAAGCTCCTTATGATGTCAA

mRNA sequence

TATCTGAGTCACGGCTTTGAAGCCTCAATTATCGAAGAAGAAAGAAGCTTTTGTCAATCGGAAAAAATGGTGGCTTCTAATTTGAAATCGGAGACTATGGATCTAATGCAGAAGAGGAGCGCTATCGAGGCCCAGATGGATGCCATCATTTCTCGCCTTTGTCAGCCCGGCGGTCCTGGACTCTCCGGAAATCTCGTCGACTCTGAGGGGTTTCCTCGTTCGGATATAGATATTCCAGTTATTCGGTCTGAGCGTGGTCGGCTTACTGAGCTGAGGAATGACCACACTGAAATCACAGAAAAGATAAATCAGAACATTCAAGTCTTGCATTCTGCAAAGCCTGCTTGTGGCTTGTCGCTCTCTAGGAATGCAGGGAATACTGAGGGTTCAATTGGCCAAAGATCATCTATCACAGCTGTTACATCCCCATCCTCAAATGGTATTTCTCAGAGGGACTCTTCCACTGCCATGGACATAGATGCAAATGGAAGCATACCTTTTGCATTGGTTGATGAAATAGCCGATGCATCGCCAGCAGCAGATGATGGATTACAACTAGGCGACCAAGTTCTTAAATTTGGGAATGTAGAGGGCGGTGATGATCTATTGCGTAGGCTTGCCTCTGAAGCACAGAATAATCAAGGTCGTGCAATACCTGTTGTGGTTATGAGGCATGGTACTCCGGTCAATTTGACTGTGACACCCAGATCATGGCAAGGCCGAGGTCTTCTTGGATGCCATTTTCGGATGATGTAGCTGGGCTCTATCCACAAGCTCAACCTGCCATGGGTTGTTCATCTTTCTACGTAACTCTCTTCGTGTTCTTCACTTAATTTACTAGTTTAATTCTAGGTTGCACACATGTTTAACAAATTTCTCTTAACTAGTCTGGATTTATAGCGATTGCCCCACCTAGCCCTTACTTTGTTGTCACTTGGCTTGAATACTCTGTAAATTGAAATAACATATGATAAGTTACTCTTTTTTATGCTATTTTAGTCATGTAAGCTCCTTATGATGTCAA

Coding sequence (CDS)

ATGGTGGCTTCTAATTTGAAATCGGAGACTATGGATCTAATGCAGAAGAGGAGCGCTATCGAGGCCCAGATGGATGCCATCATTTCTCGCCTTTGTCAGCCCGGCGGTCCTGGACTCTCCGGAAATCTCGTCGACTCTGAGGGGTTTCCTCGTTCGGATATAGATATTCCAGTTATTCGGTCTGAGCGTGGTCGGCTTACTGAGCTGAGGAATGACCACACTGAAATCACAGAAAAGATAAATCAGAACATTCAAGTCTTGCATTCTGCAAAGCCTGCTTGTGGCTTGTCGCTCTCTAGGAATGCAGGGAATACTGAGGGTTCAATTGGCCAAAGATCATCTATCACAGCTGTTACATCCCCATCCTCAAATGGTATTTCTCAGAGGGACTCTTCCACTGCCATGGACATAGATGCAAATGGAAGCATACCTTTTGCATTGGTTGATGAAATAGCCGATGCATCGCCAGCAGCAGATGATGGATTACAACTAGGCGACCAAGTTCTTAAATTTGGGAATGTAGAGGGCGGTGATGATCTATTGCGTAGGCTTGCCTCTGAAGCACAGAATAATCAAGGTCGTGCAATACCTGTTGTGGTTATGAGGCATGGTACTCCGGTCAATTTGACTGTGACACCCAGATCATGGCAAGGCCGAGGTCTTCTTGGATGCCATTTTCGGATGATGTAG

Protein sequence

MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTSPSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDLLRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM*

Homology

[Close]

BLAST of Cucsa.090220.1 vs. Swiss-Prot
Match: PSMD9_BOVIN (26S proteasome non-ATPase regulatory subunit 9 OS=Bos taurus GN=PSMD9 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21
Identity = 65/219 (29.68%), Postives = 115/219 (52.51%), Query Frame = 1


Query: 8   SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLT 67
           S+  +L++++  IEAQ+ A    L    G G++  LVD EG+PR+D+D+  +R+ R  + 
Sbjct: 21  SDVQELIRRKEEIEAQIKANYEVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNIV 80

Query: 68  ELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTSPSSNGIS 127
            L+NDH  + +++   +  LH          +R+       + + +   A++   S G+S
Sbjct: 81  CLQNDHKAVMKQVEDALHQLH----------ARDKEKQARDLAE-AHREALSRDQSQGLS 140

Query: 128 QRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD-DLLRRLAS 187
              +             FA V+ I+  SPA+  GLQ+ D++L+FG+V   +   L+ + S
Sbjct: 141 PAQA-------------FAKVNSISPGSPASIAGLQVDDEILEFGSVNTQNFQSLQNIGS 200

Query: 188 EAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCH 226
             Q+++G+ + V VMR G    L + P  W G+GLLGC+
Sbjct: 201 VVQHSEGKPLNVTVMRRGEKHQLRLVPTRWAGKGLLGCN 215

[Close]

BLAST of Cucsa.090220.1 vs. Swiss-Prot
Match: PSMD9_RAT (26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus GN=Psmd9 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.8e-21
Identity = 65/222 (29.28%), Postives = 120/222 (54.05%), Query Frame = 1


Query: 8   SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLT 67
           S+  +LM+++  IEAQ+ A    L    G G++  LVD EG+PR+D+D+  +R+ R  + 
Sbjct: 21  SDIQELMRRKEEIEAQIKANYDVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNII 80

Query: 68  ELRNDHTEITEKINQNIQVLHS---AKPACGLSLSRNAGNTEGSIGQRSSITAVTSPSSN 127
            L+NDH  + +++ + +  LH+    K A  ++ +R     E ++ +R +  +   P + 
Sbjct: 81  CLQNDHKALMKQVEEALHQLHARDKEKQARDMAEAR-----EEAMNRRLASDSPALPKA- 140

Query: 128 GISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD-DLLRR 187
                               FA V+ I+  SPA+  GLQ+ D++++FG+V   +   L+ 
Sbjct: 141 --------------------FARVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSLQN 200

Query: 188 LASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCH 226
           + +  Q+++G+ + V+V+R G    L +TP  W G+GLLGC+
Sbjct: 201 VGTVVQHSEGKPLNVMVIRRGEKHQLRLTPTRWAGKGLLGCN 216

[Close]

BLAST of Cucsa.090220.1 vs. Swiss-Prot
Match: PSMD9_HUMAN (26S proteasome non-ATPase regulatory subunit 9 OS=Homo sapiens GN=PSMD9 PE=1 SV=3)

HSP 1 Score: 102.8 bits (255), Expect = 5.0e-21
Identity = 65/219 (29.68%), Postives = 110/219 (50.23%), Query Frame = 1


Query: 8   SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLT 67
           S+  +LM+++  IEAQ+ A    L    G G++  LVD EG+PRSD+D+  +R+ R  + 
Sbjct: 21  SDVQELMRRKEEIEAQIKANYDVLESQKGIGMNEPLVDCEGYPRSDVDLYQVRTARHNII 80

Query: 68  ELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTSPSSNGIS 127
            L+NDH  + +++ + +  LH+                +     R    A     S  + 
Sbjct: 81  CLQNDHKAVMKQVEEALHQLHAR---------------DKEKQARDMAEAHKEAMSRKLG 140

Query: 128 QRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD-DLLRRLAS 187
           Q +S             FA V+ I+  SPA+  GLQ+ D++++FG+V   +   L  + S
Sbjct: 141 QSESQ-------GPPRAFAKVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSLHNIGS 200

Query: 188 EAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCH 226
             Q+++G+ + V V+R G    L + P  W G+GLLGC+
Sbjct: 201 VVQHSEGKPLNVTVIRRGEKHQLRLVPTRWAGKGLLGCN 217

[Close]

BLAST of Cucsa.090220.1 vs. Swiss-Prot
Match: PSMD9_MOUSE (26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus GN=Psmd9 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.3e-20
Identity = 63/222 (28.38%), Postives = 118/222 (53.15%), Query Frame = 1


Query: 8   SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIRSERGRLT 67
           S+  DLM+++  IEA++ A    L    G G++  LVD EG+PR+D+D+  +R+ R  + 
Sbjct: 21  SDIQDLMRRKEEIEAEIKANYDVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNII 80

Query: 68  ELRNDHTEITEKINQNIQVLHS---AKPACGLSLSRNAGNTEGSIGQRSSITAVTSPSSN 127
            L+NDH  + +++ + +  LH+    K A  ++ +R     E ++ +R +  +   P + 
Sbjct: 81  CLQNDHKALMKQVEEALHQLHARDKEKQARDMAEAR-----EEAMNRRLASNSPVLPQA- 140

Query: 128 GISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGD-DLLRR 187
                               FA V+ I+  SPA+  GLQ+ D++++FG+V   +   ++ 
Sbjct: 141 --------------------FARVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSVQN 200

Query: 188 LASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCH 226
           + +  Q+++G+ + V V+R G    L + P  W G+GLLGC+
Sbjct: 201 VGTVVQHSEGKPLNVTVIRRGEKHQLRLIPTRWAGKGLLGCN 216

[Close]

BLAST of Cucsa.090220.1 vs. Swiss-Prot
Match: PSMD9_SCHPO (Probable 26S proteasome regulatory subunit p27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nas2 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.7e-19
Identity = 65/196 (33.16%), Postives = 97/196 (49.49%), Query Frame = 1


Query: 43  LVDSEGFPRSDIDIPVIRSERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNA 102
           L+  +GFPRSDID+P IR+ R  +  LRNDH E+ ++I + ++ + S     G S    A
Sbjct: 36  LLTEDGFPRSDIDVPSIRTARHEIITLRNDHRELEDQIKKVLEKVFS-----GFSKESLA 95

Query: 103 GNTEGSIGQRSSITAVTSPSSNGISQRDSSTAMDIDANGSI-----PFALVDEIADASPA 162
            N E  + Q +      + + N           DI +   I     PF +VD +A  SPA
Sbjct: 96  ANDETKLAQEADPLNFNAANYN---------MNDIISRSKILGRVKPFCVVDSVAVESPA 155

Query: 163 ADDGLQLGDQVLKFGNVEGGDDLLRRLASEAQNNQGRAIPVVVMRHGTP------VNLTV 222
            + GL +GD+++   NV      L  L +   NN  + + V+++R  +       V L +
Sbjct: 156 QEAGLCIGDELVHVQNVTS----LSELPTFISNNVNKTLDVLLIRGYSADGSTNLVELKL 213

Query: 223 TPRSWQGRGLLGCHFR 228
           TP  WQG GLLGCH R
Sbjct: 216 TPHKWQGPGLLGCHLR 213

[Close]

BLAST of Cucsa.090220.1 vs. TrEMBL
Match: A0A0A0LGM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035450 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 4.9e-124
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTS 120
           SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTS
Sbjct: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTS 120

Query: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL 180
           PSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL
Sbjct: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM
Sbjct: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 229

[Close]

BLAST of Cucsa.090220.1 vs. TrEMBL
Match: A0A0S3RGV4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G265000 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.5e-80
Identity = 152/230 (66.09%), Postives = 189/230 (82.17%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVA+N+K+ETM LM KRSA+EA+M+A+I+RL QPG PG+SG LVDSEGFPRSDIDIPV+R
Sbjct: 1   MVATNVKAETMSLMDKRSALEAEMNAVIARLSQPGAPGVSGGLVDSEGFPRSDIDIPVVR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSIT-AVT 120
           +ER RL ELRNDH EITEKIN+NIQ+LHSA+     S+ +N G  +GS  Q SS T AV+
Sbjct: 61  AERRRLAELRNDHKEITEKINKNIQILHSARLESRSSVYKNPGTVDGSDSQTSSTTDAVS 120

Query: 121 SPSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDD 180
             +S  +  R S  +MD+D   S PFA+VDEIAD+SPA +DGLQLGDQ+LKFG+VE GD+
Sbjct: 121 LMTSQNVLMRHSPNSMDVDVLISRPFAMVDEIADSSPAVEDGLQLGDQILKFGDVEAGDN 180

Query: 181 LLRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           LL+RL+SEAQ+N GRA+PVV++R G  +NLTVTPRSWQGRGLLGCHFR++
Sbjct: 181 LLQRLSSEAQSNMGRAVPVVIVRQGIVINLTVTPRSWQGRGLLGCHFRIL 230

[Close]

BLAST of Cucsa.090220.1 vs. TrEMBL
Match: V7AXA1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G195100g PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 9.7e-80
Identity = 153/230 (66.52%), Postives = 190/230 (82.61%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVA+N+K+ETM LM KRSA+EA+M+AII+RL QPG PGLSG L++SEGFPRSDIDIPV+R
Sbjct: 1   MVATNVKAETMSLMDKRSAVEAEMNAIIARLSQPGAPGLSGGLLNSEGFPRSDIDIPVVR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSS-ITAVT 120
           +ER RL ELRNDH EITEKI+QNIQ+LHSA+   G S+ +N  N +GS  Q SS I  V 
Sbjct: 61  AERRRLAELRNDHKEITEKIDQNIQILHSAR--LGSSVYKNPVNDDGSDTQTSSTIDTVA 120

Query: 121 SPSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDD 180
           S ++  +  R S  +MD+D   S PFA+VDEIADASPA +DGLQLGDQ+LKFGNVE GD+
Sbjct: 121 SMTAQNVLMRHSPNSMDVDVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDN 180

Query: 181 LLRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           LL+RL+SEAQ+N GRA+PVV++R GT +N+T+TPRSWQGRGLLGCHFR++
Sbjct: 181 LLQRLSSEAQSNLGRAVPVVIVRQGTVINITITPRSWQGRGLLGCHFRIL 228

[Close]

BLAST of Cucsa.090220.1 vs. TrEMBL
Match: W9RLF8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002870 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.3e-79
Identity = 155/230 (67.39%), Postives = 189/230 (82.17%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVA+NLK ETM+LM+KR+A+EA+M+AII RLCQPGGPGLSGNL+DSEGFPRSD+DIP +R
Sbjct: 1   MVATNLKGETMNLMKKRTAMEAEMNAIIDRLCQPGGPGLSGNLLDSEGFPRSDLDIPAVR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRS-SITAVT 120
           +ER  L EL++DH EITEKIN+NIQVLHSA+ A      + +G  EGS  Q + ++  V 
Sbjct: 61  AERRCLAELQSDHKEITEKINENIQVLHSARLALRSLSVKESGLDEGSDNQTTVTLNDVA 120

Query: 121 SPSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDD 180
           S SS  +  RDSS   D+D   SIPFA+VDEIAD SPAA+DGLQLGDQ++KFGNVE GD+
Sbjct: 121 SASSINV-PRDSSDTKDVDVKISIPFAMVDEIADVSPAAEDGLQLGDQIVKFGNVEAGDN 180

Query: 181 LLRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           LL+RLASEAQ+N G AIPVV+MR GT +N+TVTPR+WQGRGLLGCHFRM+
Sbjct: 181 LLQRLASEAQSNNGLAIPVVLMRQGTVLNITVTPRTWQGRGLLGCHFRML 229

[Close]

BLAST of Cucsa.090220.1 vs. TrEMBL
Match: A0A067KUP5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04031 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.7e-79
Identity = 155/232 (66.81%), Postives = 190/232 (81.90%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVA+NLK+ETM L++ RSAIE +M+AII RLCQPGGPGLSGNLVD+EGFPR+DIDIPV+R
Sbjct: 1   MVAANLKAETMKLVENRSAIEVEMNAIIERLCQPGGPGLSGNLVDAEGFPRTDIDIPVVR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSS-ITAVT 120
           +ER RL  LR+DH EITEKIN NIQVLHSA+ A     ++ +GN   S  Q SS + AV 
Sbjct: 61  AERNRLAVLRSDHKEITEKINANIQVLHSARLAARPLTTKGSGNDGASNNQNSSMVNAVA 120

Query: 121 SPSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVE--GG 180
           S SS+ +  RDS ++MD+D   SIPFA+VDEIADASP A+DGLQLGDQ++KFG+VE   G
Sbjct: 121 SASSHSVVTRDSPSSMDVDMILSIPFAVVDEIADASPTAEDGLQLGDQIVKFGSVEYKVG 180

Query: 181 DDLLRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           D+LL+RLA+EAQ NQG A+PV+++R G PVNLTVTPRSWQGRGLLGC FR++
Sbjct: 181 DNLLQRLATEAQANQGHAMPVILLRQGAPVNLTVTPRSWQGRGLLGCSFRIL 232

[Close]

BLAST of Cucsa.090220.1 vs. TAIR10
Match: AT5G57950.1 (AT5G57950.1 26S proteasome regulatory subunit, putative)

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-76
Identity = 141/229 (61.57%), Postives = 181/229 (79.04%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MV +NLK+ETM LM KR+A+E +M++I+ RLC PGGPGLSGNL+DSEGFPR DIDIP++R
Sbjct: 1   MVGANLKAETMALMDKRTAMETEMNSIVERLCNPGGPGLSGNLIDSEGFPREDIDIPMVR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTS 120
           +ER RL ELR++H EITEKIN NIQ+LHS +P    S ++++G  E S+   +  +   S
Sbjct: 61  TERRRLAELRSEHGEITEKINVNIQILHSVRPTSRASSTKDSGPEETSLSGAAVNSLSAS 120

Query: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL 180
             ++G S   +S  MD+D   SIPFA+VDEI ++SPAA+ GLQLGDQVLKFGNVEGGD+L
Sbjct: 121 MQTSGFSV--TSGPMDVDVVTSIPFAMVDEINESSPAAEGGLQLGDQVLKFGNVEGGDNL 180

Query: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           L+RLA+EAQ+NQG+A+ V VMR G  V L+VTPR WQGRGLLGCHFR++
Sbjct: 181 LQRLAAEAQSNQGQAVSVQVMRQGAKVVLSVTPRIWQGRGLLGCHFRLV 227

[Close]

BLAST of Cucsa.090220.1 vs. NCBI nr
Match: gi|449453980|ref|XP_004144734.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 7.0e-124
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTS 120
           SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTS
Sbjct: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTS 120

Query: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL 180
           PSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL
Sbjct: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM
Sbjct: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 229

[Close]

BLAST of Cucsa.090220.1 vs. NCBI nr
Match: gi|659070006|ref|XP_008452868.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo])

HSP 1 Score: 446.8 bits (1148), Expect = 2.3e-122
Identity = 225/229 (98.25%), Postives = 228/229 (99.56%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR
Sbjct: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSITAVTS 120
           SERGRLTELRNDHTEITEKINQNIQVLHSAKPAC LSLSR+AGNTEGSIGQRSS+TAVTS
Sbjct: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACSLSLSRDAGNTEGSIGQRSSVTAVTS 120

Query: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDDL 180
           PSSNGISQRDSSTAMDIDANGSIPFALVDE+ADASPAADDGLQLGDQVLKFGNVEGGDDL
Sbjct: 121 PSSNGISQRDSSTAMDIDANGSIPFALVDEVADASPAADDGLQLGDQVLKFGNVEGGDDL 180

Query: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM
Sbjct: 181 LRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 229

[Close]

BLAST of Cucsa.090220.1 vs. NCBI nr
Match: gi|359484837|ref|XP_003633171.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 isoform X1 [Vitis vinifera])

HSP 1 Score: 311.2 bits (796), Expect = 1.5e-81
Identity = 155/230 (67.39%), Postives = 191/230 (83.04%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MV +NLK+E M LM +R+ +EAQM+AII RLCQPGGPG+SG+LVDSEGFPRSDIDIP +R
Sbjct: 1   MVGANLKAEAMALMDRRTELEAQMNAIIQRLCQPGGPGISGSLVDSEGFPRSDIDIPTVR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSI-TAVT 120
           +ER RL ELRND+ +ITEKIN+NIQ+LHSA+ A   SL ++  N EGS  Q SS  TAV 
Sbjct: 61  AERQRLAELRNDYKDITEKINENIQLLHSARLAPRSSLHKDLDNDEGSNNQGSSTATAVP 120

Query: 121 SPSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDD 180
           S +S+ +  RD+ TAMD+DA  S+PFA+VDEIA+ASPAA+DGLQLGD+++KFGNVE GD+
Sbjct: 121 SAASHNVLPRDTLTAMDVDATVSLPFAVVDEIAEASPAAEDGLQLGDRIVKFGNVEAGDN 180

Query: 181 LLRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           LL RLASEAQ N G AIPV+VMR G  +NLT+TPR+WQGRGLLGCHF+M+
Sbjct: 181 LLPRLASEAQTNHGHAIPVIVMRQGALINLTMTPRTWQGRGLLGCHFQML 230

[Close]

BLAST of Cucsa.090220.1 vs. NCBI nr
Match: gi|950953438|ref|XP_014496174.1| (PREDICTED: probable 26S proteasome regulatory subunit p27 [Vigna radiata var. radiata])

HSP 1 Score: 306.6 bits (784), Expect = 3.7e-80
Identity = 153/230 (66.52%), Postives = 188/230 (81.74%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVA+N+K+ETM LM KRSA+EA+M+AII RL QPG PG+SG L+DSEGFPRSDIDIP +R
Sbjct: 1   MVATNVKAETMSLMDKRSALEAEMNAIIVRLSQPGAPGVSGALLDSEGFPRSDIDIPAVR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSIT-AVT 120
           +ER RL ELRNDH EITEKINQNIQ+LHSA+     S+ +N GN +GS  Q SS T  V+
Sbjct: 61  AERRRLAELRNDHKEITEKINQNIQILHSARLESRSSVYKNPGNDDGSDSQTSSTTDTVS 120

Query: 121 SPSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDD 180
           S +S  +  R S  +MD+D   S PFA+VDEIAD+SPA +DGLQLGDQ+LKFG+VE GD+
Sbjct: 121 SMTSQNVLMRHSPNSMDVDVLISRPFAMVDEIADSSPAVEDGLQLGDQILKFGDVEAGDN 180

Query: 181 LLRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           LL+RL+SEAQ+N GRA+PVV++R G  +NLTVTPRSWQGRGLLGCHFR++
Sbjct: 181 LLQRLSSEAQSNMGRAVPVVIVRQGIVINLTVTPRSWQGRGLLGCHFRIL 230

[Close]

BLAST of Cucsa.090220.1 vs. NCBI nr
Match: gi|965664016|dbj|BAT79725.1| (hypothetical protein VIGAN_02265000 [Vigna angularis var. angularis])

HSP 1 Score: 306.6 bits (784), Expect = 3.7e-80
Identity = 152/230 (66.09%), Postives = 189/230 (82.17%), Query Frame = 1


Query: 1   MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEGFPRSDIDIPVIR 60
           MVA+N+K+ETM LM KRSA+EA+M+A+I+RL QPG PG+SG LVDSEGFPRSDIDIPV+R
Sbjct: 1   MVATNVKAETMSLMDKRSALEAEMNAVIARLSQPGAPGVSGGLVDSEGFPRSDIDIPVVR 60

Query: 61  SERGRLTELRNDHTEITEKINQNIQVLHSAKPACGLSLSRNAGNTEGSIGQRSSIT-AVT 120
           +ER RL ELRNDH EITEKIN+NIQ+LHSA+     S+ +N G  +GS  Q SS T AV+
Sbjct: 61  AERRRLAELRNDHKEITEKINKNIQILHSARLESRSSVYKNPGTVDGSDSQTSSTTDAVS 120

Query: 121 SPSSNGISQRDSSTAMDIDANGSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEGGDD 180
             +S  +  R S  +MD+D   S PFA+VDEIAD+SPA +DGLQLGDQ+LKFG+VE GD+
Sbjct: 121 LMTSQNVLMRHSPNSMDVDVLISRPFAMVDEIADSSPAVEDGLQLGDQILKFGDVEAGDN 180

Query: 181 LLRRLASEAQNNQGRAIPVVVMRHGTPVNLTVTPRSWQGRGLLGCHFRMM 230
           LL+RL+SEAQ+N GRA+PVV++R G  +NLTVTPRSWQGRGLLGCHFR++
Sbjct: 181 LLQRLSSEAQSNMGRAVPVVIVRQGIVINLTVTPRSWQGRGLLGCHFRIL 230

The following BLAST results are available for this feature:

BLAST of Cucsa.090220.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSMD9_BOVIN	1.3e-21	29.68	26S proteasome non-ATPase regulatory subunit 9 OS=Bos taurus GN=PSMD9 PE=1 SV=1	[more]
PSMD9_RAT	3.8e-21	29.28	26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus GN=Psmd9 PE=...	[more]
PSMD9_HUMAN	5.0e-21	29.68	26S proteasome non-ATPase regulatory subunit 9 OS=Homo sapiens GN=PSMD9 PE=1 SV=...	[more]
PSMD9_MOUSE	3.3e-20	28.38	26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus GN=Psmd9 PE=1 SV=...	[more]
PSMD9_SCHPO	4.7e-19	33.16	Probable 26S proteasome regulatory subunit p27 OS=Schizosaccharomyces pombe (str...	[more]

BLAST of Cucsa.090220.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGM6_CUCSA	4.9e-124	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035450 PE=4 SV=1	[more]
A0A0S3RGV4_PHAAN	2.5e-80	66.09	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G265000 PE=...	[more]
V7AXA1_PHAVU	9.7e-80	66.52	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G195100g PE=4 SV=1	[more]
W9RLF8_9ROSA	1.3e-79	67.39	Uncharacterized protein OS=Morus notabilis GN=L484_002870 PE=4 SV=1	[more]
A0A067KUP5_JATCU	1.7e-79	66.81	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04031 PE=4 SV=1	[more]

BLAST of Cucsa.090220.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57950.1	1.5e-76	61.57	26S proteasome regulatory subunit, putative	[more]

BLAST of Cucsa.090220.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453980\|ref\|XP_004144734.1\|	7.0e-124	100.00	PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis sativus]	[more]
gi\|659070006\|ref\|XP_008452868.1\|	2.3e-122	98.25	PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo]	[more]
gi\|359484837\|ref\|XP_003633171.1\|	1.5e-81	67.39	PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 isoform X1 [Vitis vini...	[more]
gi\|950953438\|ref\|XP_014496174.1\|	3.7e-80	66.52	PREDICTED: probable 26S proteasome regulatory subunit p27 [Vigna radiata var. ra...	[more]
gi\|965664016\|dbj\|BAT79725.1\|	3.7e-80	66.09	hypothetical protein VIGAN_02265000 [Vigna angularis var. angularis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001478	PDZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016043	cellular component organization
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0044763	single-organism cellular process
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.090220	Cucsa.090220	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.090220.1	Cucsa.090220.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.090220.1.five_prime_UTR.1	Cucsa.090220.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.090220.1.CDS.1	Cucsa.090220.1.CDS.1	CDS
Cucsa.090220.1.CDS.2	Cucsa.090220.1.CDS.2	CDS
Cucsa.090220.1.CDS.3	Cucsa.090220.1.CDS.3	CDS
Cucsa.090220.1.CDS.4	Cucsa.090220.1.CDS.4	CDS
Cucsa.090220.1.CDS.5	Cucsa.090220.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.090220.1.three_prime_UTR.1	Cucsa.090220.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001478	PDZ domain	GENE3D	G3DSA:2.30.42.10		coord: 158..225 score: 3.7E-13coord: 113..157 score: 5.
IPR001478	PDZ domain	unknown	SSF50156	PDZ domain-like	coord: 146..226 score: 2.0
None	No IPR available	PANTHER	PTHR12651	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9	coord: 1..229 score: 1.7
None	No IPR available	PANTHER	PTHR12651:SF1	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9	coord: 1..229 score: 1.7