Cucsa.087580.5 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTTTGTTTCAGACCCTCCCGTCTGGGCCTGCGTCTGCTACAGCTTAAAACGAAATTTCCCTCTTCGGTCCAATAGAGGGTAATCGACGACTTTCCTTGCTCGCGAAAAAGGAACAGCTTCGTGAAGATGGCATTACAAGCTGCTGGGGTTTCAACGTCTAAGGTTCTCATCCTCGTCGGAGCAGGTTTTTTTtCATATTCGCCTTCCTATTCTGATCATTCATCTGTATTCAGCTtttAGCTTTTACGGTCTTGTTTATAACAGTCTCTGGATATTGGGATATTGGGATATTGGGAAACCCCAATTTCATTGTTATTGCATAATCCTTGAACCTGATTACACATTTTCAAGTGTAATCGTGTCGTTTTCTTGTAAATCGGATTACAACTTAGAAGTTTCATGCCGTCCGCTGTTCTTCTCTGATTGTTGGGTTTCTCTGTCATTCATTAGGGTTAACTGGTTCTGTTGTCTTAAGAAGTGGGCGATTGTCTGATCTGATATCGCAACTTCAGGAATTACTGAAGGGTGTGACTGAGGAAGAACTCTCTCCTAGCCCTTACAAGTATGATACTGCTGTTCTTGCTGCACAGGTTTGTACTTTATGGCATGTTATTATATTCGGGTGAAGGAAaCAAGTGAAATTTTGTTTCTGTTTGGTAATTGGGGTTAACGGGAAGGTACTGACAGAAGATCTATTGATAATTGATGTACCAAAAATGTGGAGACGCAAAGTGAATACGAACTATTCCTCTGGTTAAGCTCCAAAAGAATGTAAATGGCATTCTTCTGGTAATATCAAAATAATCATCAATAATCAGAATTTTCTGTTTTTTtTTTtAATACGTAGTATCTGTATGTTGGATCCATTGCTGTAAATGCTTCCGTTAATTTAAAGTACATTCTGGTTACTGATTTGTAAACTCATTCAGATTCGGCAACTGACACAAGAGATCAGGGAGTTGACATTATCTGGTCCTGTAACCGTCTTTAATGGGAACTCTTCTTCTAGTGGTATGGACATCTAATTCTGTGGATTCTTTGTCTGAAAGTTATGATTTTGTATTtttTTTTTTTtttGAATGCTCTTATTGAGAAACCTCAAGATCTTGTTTGTTACTACTTTATTCCTATGTTGATTTAATGGGTACCCATTGTTAGGGAAAAaGAAAGCAATGCATTGTTTGAGAAACAAATTAAAACAATGCAAACATTCCTAGGTAGATATTACTCTGGTTTCTTTTTtGCCTTTTCTTtCTTTTTTAGGCAACTATACTCTGAATTTGCTACTTCTGATTTTGCCTTATCCTATTCATCTTTTATTAATTCCTGAAACTTGGCTCTTTTGAGATCTCAGTAAAGATGTTTATGTAAAAATAAACTTTATGAAACTTCGCTTCAAGACATCAATATTTCTTGAAATTCTTAACTGTTTGTTTGATTTTTGGAAAGAGAACTGTTGGTTTCATATTCTCATACCCAACACATCATGTATATTTGGAGTCCAAACTTCTAGGCTTCTTGGACCCATATTGTAGAATTTCACATAAACTTCATAAGGGGCAAGCTGTGAATGAATACTGGGATTCTATTAATGGAGTCTCTAGATGGAGACTCTAGATAGCATTCAAGTACTTGATTGCAAATTAAATCAATGCATCTCAGGAAGTTCCATACAAAAGCATCTATTTGTTtCTTTATCTCAAGTGACGCGTTTGACTCATGTATCTTGAATCAAATTTTCCCTGCTCTGATAAACAATATTTACAAACACAGAAAAATTCAATTACTTTCGTAAAAAATCCACTAATAGGAAGGAAATAGGAAGGAAAAAAaGTGTAAAACTTCATTGTAGGTAAATCAAAAAAaTTCATTATCAATTGCCTCTGAAGCAGGCTAGAAAGTGAGGTGAACTCATACACGATAAGACAACCAGCATCAGCATTGGACTTGACAGAAAAGGTTCATCTCCATCAACTTCTTCCTCTACTTTTCTCTCCATCTTTTCTCTCAAATTGTGAGAGTTGAAAGGTGAGGGATGGGTAAAATCTCCATTGATAGGCAGTTTTTGGTTGATAACAACGGAAaGGGAAGGAAGATAACAATATCAAGGAAAGACGTGGCAAGAAATCCAGCAAGATTGAAGTGGAATTGGGAACTGTCTCCTTGCAGTGAGGGTCCTTGACTTGCTATAAGGCACATAAATTCTTCCTAGATGGAACGATTCATAATGCTAATAGGATTGGTATTATGATTATTAACAAAGGTTGCCTCCCTCCCCCTTCTAAATGACAGTGTGCCATAGTTGAAGAATGAAGCAAAGGAGAAGCAAACTTGACACTTCCCCCAGTGAATCCCAGACCAGGAGGATAAGAATCCAAAGAAAGAGGACTTATCTGACAAGTTAATTCAACCACACTTACGAACGAACAAGTGAGATGGGATGTTCCACTGTTGAGAGCTAAGTGAGACCCCCGTTGAGCTCAATCCATCCCTAAGGCTGAACTATCACTATATCATTGCCTTTAATCGAGTCTTCTCTCCTGTTAGTAGAAGCAGCCTTCAGGCCCCCTCTTTTGAAATAACGCCTTTTGCTTCCCATTCCACTTTCCTTGACAATTGCCCCTGCCCTCACGTCAAACAGGCCATCTTCAACACCTCCTCTGCTTTCTCGACCATTGGAGTGGAGAGAAAGAGTCATCCTCCAAATACCTCACAACTGAAGGGTTAGAGACGTAATCTTCTTCTTCCACATCCGAATTCAATGCCCCAGCCCTTGAAGCCTGGTCTCAGCCAACCACCAAAAATTATTCAGGCTAAGTCAATCTCTGGGTTTTTAAGTTTGTCTCGTTCAAAACTGGCCCATTTGAGTTGGCGAACGATGAAGGAAGCGGCCTCAAATATCTTTCTTTAGAAGAATCTGTTTGCGGGAAACTAGTTGGAGATGTTAGGCACATCACCAAGTTCAAAACCCTTCTCTAGTTGAACTTAACTGGAACTTTAGCAACCAACCCACAAGACAATCTAGGGTTCATGGCTTTCGAAATCCCCATGTGAAGCACATGAATATCTTTCTCCTTAGTTCTCTGACCACAAGACATGCTTAATGAAGCCTTCCCTATAGTGATCTGATGGGTAAGCAGAGAAACCTTACCAACTTCTTTCTCTTGCTTTGATGATCAAAACCTCACCAACCGACCAAAATAAAACCATCTTCTTTCCTTTAGACAGGGGAGGGAGGATGTTTGAGTGTGGAGTCCTTCCCCCTTAAAGGCTTCACTTTTAGATCTTTCTTTTGGTTTTTACTTGACCCCTCTCCTACGATTAAGTTCGTTTTTtACGGTTTATGGAGGACAAAAaTTCCAAAAAAAGGTTGAGTTATTTTCTTGGCAAGTTTTACTTGGGTGTTTGTACAAAGTGGATGGGATTGGGAGAAAGATGCCTTTGCTTTTGGGCCCTTGGTGTTGTATTCTTTGTTGAAAGGCGGAGGAAAACCTTAATCATCTTCTCGAGAAGTATGAATTTGCCAAATTTGCGGGGCATGATTTCTTTCAAGAGTTCGGTTCCGTGCTCACTTGGCAGAAGAATGTTCGTTTAATGATCGGGGAGTTCCTCTTTCATCCACCTTCAAAGAGAAAGACTGTTTTCTTTGGGATGTTGGGGTGTGCTATCTGTGGGATCTTTGGGGAGGGAAACAATAGTGTTTCTTGGTGTGGAGAGAGACCCTAGTGAGGTTTCATGTTTCTCTCAAATTTTTTTtGTAATTATTCTTTAGGTAATACCTTACTTAGTTGGAAACCCTTTCCTAAGGTGTTTTGTGTGCTTGATTTTTTTTTTttCTGTATGCTTTTGTATTCCTTCATGTTTTTCCGATGAAAGCAGCTGTTTGAAAAAaTAAAAAAaCAGAAGGTAAAGCTAAGTTCAGTGTATCTGGAAATGCACAGAAATTGCTCGTTATGCAGACTTGGCAAGGTGATCTTTTTtCTTTCAGGGAATTATGCTTCTTACTTGGTACCTGCAGCTGCTGTTGGAGCGATGGGATATTGCTACATGTGGTGGAAGGTGAAACTTTTTATTTCAGTTGACTGAAAAAAGGAGTATTTTTGTAGCAAGATTGACATTGGTAACAACATTTCTGCCTTTTGATCTAGCAGGGATTGTCATTTTCTGACGTAATGTTTGTGACAAAGCAAAACATGGCAAATGCTGTTTCGACTGTCTCTAAACAACTGGATAATGTGCATGAAGCACTGGCTGTAAGTGACTGGTTAGACATTGTGTAATGACCTTAAACAGGAATGCTAGTCTATGGTGGATGCATGGCTTTAATTTtAACCCATTTTTGGCTCCAGTCAACAAGGAGGCATCTGACAAAGAAGTTGGAGAACTTAGATTGGAGGCTAGATGAGGAGATCGAAACCACAAATCTTATTGCTAATAATGTAAGAGGAGAGCTACCTTCTTCCTTTTTtCTAATCTTGATAGATATAACATTCCTTTTTATACACAAATATGTAGATATTCCACTAATCATTTTCTCATTGTAAGAAGCATTCTATTAGATCCAATATAGATTTTTTAACTAAGATTGGTAAGAAATCATATTATATTTCTTTTACACTTTTATGGCTATTAAGAAGATCAAGTTGACAAGACCAACGCTTGTCTTTCAGAATTCCCTGTTGATGAAGCTTTCGTTCCTTGTATAAAGCCTTTCATCTAGCTGAAATTTCTCTTAATTCTGATATAAGAGACCATGAACCTTGTGAAATAAATCATATTCATAGAGTATAAAGTGAATGCAACATCCTTTTGATGTCTTATCTGCGTGCAGGTGGAGGAGGTTAAGTGTAACCTTTCTCAGATTGGTTTTGATGTTGAAACAATCCATCAAATGGTCTCACAATTGGTGAGTCACTTACTACCTTAAAACTCTTTTTTAGTGTGCAAGCCAAACCACGGTGCAAGATGTTCTTGAATTTCATCCCCACTGACCCCTTTGACAAACAGGAAGGAAAACTTGAGGTTCTTGAAAGGAAACAGAACGTCACAAATTCTGGTCTCTGGTATCTATGTCAAGCTGCAGAAGGTGTCAAAGGCCGCATAAGCGAAAAACTCTTCCCAGTGAGTAGTTTCCCTCGTCACTATCACTTCACGCTGAAAGCAAATCCTTCTCCCTGTGAAGTGGATTTTGTTTCATTAATATTTGGCAGGAAGTTGAGGCAAAGAAGATTGCAACAGTTAAATATGAGGAGAATCCCCTTAAGGTACGAGAATGCTGCACAAATATTGCGAGATAATTTGTATCTATTTCTGGACAGCATTAGAAATACCCAATATTTGTACAGGGACTGCAGTTCATTGCCGATACTAAAGACTCCATTGTGAAGAGAAATAGCCTCAACGAATTCAACGGTGAAAAAGTTGCGGTAGGAAGAACAAGAGTGTACAGGTCATATCCTGTTGGGATTGCTTTGGCACCGGGCATTATGGGCTGTGATACGTAATGTTTTCCTCCTTAAAAGTTGATTTCATTCTCGGTTTCCTATTGAGTCCATGAGAAGCATTTGTGATTTGCATATAAAGTAATGCCTTCATGGTAAGGTTTATAGGTTTTACGATAACACTTATATTTGTTGTATAAATTGTTTGAACAAATGGAACGAAAAaTATTGCACATCTCTTTCAATCAATGATCTGAATATTTCCAGATTCTTTCA TGCTTTGTTTCAGACCCTCCCGTCTGGGCCTGCGTCTGCTACAGCTTAAAACGAAATTTCCCTCTTCGGTCCAATAGAGGGTAATCGACGACTTTCCTTGCTCGCGAAAAAGGAACAGCTTCGTGAAGATGGCATTACAAGCTGCTGGGGTTTCAACGTCTAAGGTTCTCATCCTCGTCGGAGCAGGGTTAACTGGTTCTGTTGTCTTAAGAAGTGGGCGATTGTCTGATCTGATATCGCAACTTCAGGAATTACTGAAGGGTGTGACTGAGGAAGAACTCTCTCCTAGCCCTTACAAGTATGATACTGCTGTTCTTGCTGCACAGATTCGGCAACTGACACAAGAGATCAGGGAGTTGACATTATCTGGTCCTGTAACCGTCTTTAATGGGAACTCTTCTTCTAGTGGGAATTATGCTTCTTACTTGGTACCTGCAGCTGCTGTTGGAGCGATGGGATATTGCTACATGTGGTGGAAGGGATTGTCATTTTCTGACGTAATGTTTGTGACAAAGCAAAACATGGCAAATGCTGTTTCGACTGTCTCTAAACAACTGGATAATGTGCATGAAGCACTGGCTTCAACAAGGAGGCATCTGACAAAGAAGTTGGAGAACTTAGATTGGAGGCTAGATGAGGAGATCGAAACCACAAATCTTATTGCTAATAATGTGGAGGAGGTTAAGTGTAACCTTTCTCAGATTGGTTTTGATGTTGAAACAATCCATCAAATGGTCTCACAATTGGAAGGAAAACTTGAGGTTCTTGAAAGGAAACAGAACGTCACAAATTCTGGTCTCTGGTATCTATGTCAAGCTGCAGAAGGTGTCAAAGGCCGCATAAGCGAAAAACTCTTCCCAGAAGTTGAGGCAAAGAAGATTGCAACAGTTAAATATGAGGAGAATCCCCTTAAGGTACGAGAATGCTGCACAAATATTGCGAGATAATTTGTATCTATTTCTGGACAGCATTAGAAATACCCAATATTTGTACAGGGACTGCAGTTCATTGCCGATACTAAAGACTCCATTGTGAAGAGAAATAGCCTCAACGAATTCAACGGTGAAAAAGTTGCGGTAGGAAGAACAAGAGTGTACAGGTCATATCCTGTTGGGATTGCTTTGGCACCGGGCATTATGGGCTGTGATACGTAATGTTTTCCTCCTTAAAAGTTGATTTCATTCTCGGTTTCCTATTGAGTCCATGAGAAGCATTTGTGATTTGCATATAAAGTAATGCCTTCATGGTAAGGTTTATAGGTTTTACGATAACACTTATATTTGTTGTATAAATTGTTTGAACAAATGGAACGAAAAATATTGCACATCTCTTTCAATCAATGATCTGAATATTTCCAGATTCTTTCA ATGGCATTACAAGCTGCTGGGGTTTCAACGTCTAAGGTTCTCATCCTCGTCGGAGCAGGGTTAACTGGTTCTGTTGTCTTAAGAAGTGGGCGATTGTCTGATCTGATATCGCAACTTCAGGAATTACTGAAGGGTGTGACTGAGGAAGAACTCTCTCCTAGCCCTTACAAGTATGATACTGCTGTTCTTGCTGCACAGATTCGGCAACTGACACAAGAGATCAGGGAGTTGACATTATCTGGTCCTGTAACCGTCTTTAATGGGAACTCTTCTTCTAGTGGGAATTATGCTTCTTACTTGGTACCTGCAGCTGCTGTTGGAGCGATGGGATATTGCTACATGTGGTGGAAGGGATTGTCATTTTCTGACGTAATGTTTGTGACAAAGCAAAACATGGCAAATGCTGTTTCGACTGTCTCTAAACAACTGGATAATGTGCATGAAGCACTGGCTTCAACAAGGAGGCATCTGACAAAGAAGTTGGAGAACTTAGATTGGAGGCTAGATGAGGAGATCGAAACCACAAATCTTATTGCTAATAATGTGGAGGAGGTTAAGTGTAACCTTTCTCAGATTGGTTTTGATGTTGAAACAATCCATCAAATGGTCTCACAATTGGAAGGAAAACTTGAGGTTCTTGAAAGGAAACAGAACGTCACAAATTCTGGTCTCTGGTATCTATGTCAAGCTGCAGAAGGTGTCAAAGGCCGCATAAGCGAAAAACTCTTCCCAGAAGTTGAGGCAAAGAAGATTGCAACAGTTAAATATGAGGAGAATCCCCTTAAGGTACGAGAATGCTGCACAAATATTGCGAGATAA MALQAAGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEELSPSPYKYDTAVLAAQIRQLTQEIRELTLSGPVTVFNGNSSSSGNYASYLVPAAAVGAMGYCYMWWKGLSFSDVMFVTKQNMANAVSTVSKQLDNVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKCNLSQIGFDVETIHQMVSQLEGKLEVLERKQNVTNSGLWYLCQAAEGVKGRISEKLFPEVEAKKIATVKYEENPLKVRECCTNIAR*
BLAST of Cucsa.087580.5 vs. TrEMBL
Match: A0A0A0LT32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408370 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 2.6e-148 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. TrEMBL
Match: W9RAB4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004043 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 8.2e-102 Identity = 193/264 (73.11%), Postives = 230/264 (87.12%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. TrEMBL
Match: A0A067KG73_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13782 PE=4 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 2.9e-99 Identity = 190/264 (71.97%), Postives = 228/264 (86.36%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. TrEMBL
Match: M5WT55_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008684mg PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 3.8e-99 Identity = 190/264 (71.97%), Postives = 221/264 (83.71%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. TrEMBL
Match: B9SSH8_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0511000 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.6e-97 Identity = 187/264 (70.83%), Postives = 223/264 (84.47%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. TAIR10
Match: AT1G04960.2 (AT1G04960.2 Protein of unknown function (DUF1664)) HSP 1 Score: 285.4 bits (729), Expect = 3.6e-77 Identity = 141/227 (62.11%), Postives = 190/227 (83.70%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. TAIR10
Match: AT1G27000.1 (AT1G27000.1 Protein of unknown function (DUF1664)) HSP 1 Score: 197.6 bits (501), Expect = 1.0e-50 Identity = 98/221 (44.34%), Postives = 157/221 (71.04%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. TAIR10
Match: AT2G02730.1 (AT2G02730.1 Protein of unknown function (DUF1664)) HSP 1 Score: 184.1 bits (466), Expect = 1.1e-46 Identity = 94/245 (38.37%), Postives = 159/245 (64.90%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. TAIR10
Match: AT1G24267.2 (AT1G24267.2 Protein of unknown function (DUF1664)) HSP 1 Score: 114.8 bits (286), Expect = 8.5e-26 Identity = 75/247 (30.36%), Postives = 125/247 (50.61%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. TAIR10
Match: AT1G24265.3 (AT1G24265.3 Protein of unknown function (DUF1664)) HSP 1 Score: 102.8 bits (255), Expect = 3.4e-22 Identity = 67/233 (28.76%), Postives = 113/233 (48.50%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. NCBI nr
Match: gi|700208072|gb|KGN63191.1| (hypothetical protein Csa_2G408370 [Cucumis sativus]) HSP 1 Score: 532.7 bits (1371), Expect = 3.7e-148 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. NCBI nr
Match: gi|449441670|ref|XP_004138605.1| (PREDICTED: uncharacterized protein LOC101208062 [Cucumis sativus]) HSP 1 Score: 511.1 bits (1315), Expect = 1.2e-141 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. NCBI nr
Match: gi|659111888|ref|XP_008455957.1| (PREDICTED: uncharacterized protein LOC103496021 [Cucumis melo]) HSP 1 Score: 498.0 bits (1281), Expect = 1.0e-137 Identity = 255/262 (97.33%), Postives = 259/262 (98.85%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. NCBI nr
Match: gi|703110051|ref|XP_010099477.1| (hypothetical protein L484_004043 [Morus notabilis]) HSP 1 Score: 378.3 bits (970), Expect = 1.2e-101 Identity = 193/264 (73.11%), Postives = 230/264 (87.12%), Query Frame = 1
BLAST of Cucsa.087580.5 vs. NCBI nr
Match: gi|802658714|ref|XP_012080677.1| (PREDICTED: uncharacterized protein LOC105640884 [Jatropha curcas]) HSP 1 Score: 369.8 bits (948), Expect = 4.2e-99 Identity = 190/264 (71.97%), Postives = 228/264 (86.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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