Cucsa.087580.2 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTTTGTTTCAGACCCTCCCGTCTGGGCCTGCGTCTGCTACAGCTTAAAACGAAATTTCCCTCTTCGGTCCAATAGAGGGTAATCGACGACTTTCCTTGCTCGCGAAAAAGGAACAGCTTCGTGAAGATGGCATTACAAGCTGCTGGGGTTTCAACGTCTAAGGTTCTCATCCTCGTCGGAGCAGGTTTTTTTtCATATTCGCCTTCCTATTCTGATCATTCATCTGTATTCAGCTtttAGCTTTTACGGTCTTGTTTATAACAGTCTCTGGATATTGGGATATTGGGATATTGGGAAACCCCAATTTCATTGTTATTGCATAATCCTTGAACCTGATTACACATTTTCAAGTGTAATCGTGTCGTTTTCTTGTAAATCGGATTACAACTTAGAAGTTTCATGCCGTCCGCTGTTCTTCTCTGATTGTTGGGTTTCTCTGTCATTCATTAGGGTTAACTGGTTCTGTTGTCTTAAGAAGTGGGCGATTGTCTGATCTGATATCGCAACTTCAGGAATTACTGAAGGGTGTGACTGAGGAAGAACTCTCTCCTAGCCCTTACAAGTATGATACTGCTGTTCTTGCTGCACAGGTTTGTACTTTATGGCATGTTATTATATTCGGGTGAAGGAAaCAAGTGAAATTTTGTTTCTGTTTGGTAATTGGGGTTAACGGGAAGGTACTGACAGAAGATCTATTGATAATTGATGTACCAAAAATGTGGAGACGCAAAGTGAATACGAACTATTCCTCTGGTTAAGCTCCAAAAGAATGTAAATGGCATTCTTCTGGTAATATCAAAATAATCATCAATAATCAGAATTTTCTGTTTTTTtTTTtAATACGTAGTATCTGTATGTTGGATCCATTGCTGTAAATGCTTCCGTTAATTTAAAGTACATTCTGGTTACTGATTTGTAAACTCATTCAGATTCGGCAACTGACACAAGAGATCAGGGAGTTGACATTATCTGGTCCTGTAACCGTCTTTAATGGGAACTCTTCTTCTAGTGGTATGGACATCTAATTCTGTGGATTCTTTGTCTGAAAGTTATGATTTTGTATTtttTTTTTTTtttGAATGCTCTTATTGAGAAACCTCAAGATCTTGTTTGTTACTACTTTATTCCTATGTTGATTTAATGGGTACCCATTGTTAGGGAAAAaGAAAGCAATGCATTGTTTGAGAAACAAATTAAAACAATGCAAACATTCCTAGGTAGATATTACTCTGGTTTCTTTTTtGCCTTTTCTTtCTTTTTTAGGCAACTATACTCTGAATTTGCTACTTCTGATTTTGCCTTATCCTATTCATCTTTTATTAATTCCTGAAACTTGGCTCTTTTGAGATCTCAGTAAAGATGTTTATGTAAAAATAAACTTTATGAAACTTCGCTTCAAGACATCAATATTTCTTGAAATTCTTAACTGTTTGTTTGATTTTTGGAAAGAGAACTGTTGGTTTCATATTCTCATACCCAACACATCATGTATATTTGGAGTCCAAACTTCTAGGCTTCTTGGACCCATATTGTAGAATTTCACATAAACTTCATAAGGGGCAAGCTGTGAATGAATACTGGGATTCTATTAATGGAGTCTCTAGATGGAGACTCTAGATAGCATTCAAGTACTTGATTGCAAATTAAATCAATGCATCTCAGGAAGTTCCATACAAAAGCATCTATTTGTTtCTTTATCTCAAGTGACGCGTTTGACTCATGTATCTTGAATCAAATTTTCCCTGCTCTGATAAACAATATTTACAAACACAGAAAAATTCAATTACTTTCGTAAAAAATCCACTAATAGGAAGGAAATAGGAAGGAAAAAAaGTGTAAAACTTCATTGTAGGTAAATCAAAAAAaTTCATTATCAATTGCCTCTGAAGCAGGCTAGAAAGTGAGGTGAACTCATACACGATAAGACAACCAGCATCAGCATTGGACTTGACAGAAAAGGTTCATCTCCATCAACTTCTTCCTCTACTTTTCTCTCCATCTTTTCTCTCAAATTGTGAGAGTTGAAAGGTGAGGGATGGGTAAAATCTCCATTGATAGGCAGTTTTTGGTTGATAACAACGGAAaGGGAAGGAAGATAACAATATCAAGGAAAGACGTGGCAAGAAATCCAGCAAGATTGAAGTGGAATTGGGAACTGTCTCCTTGCAGTGAGGGTCCTTGACTTGCTATAAGGCACATAAATTCTTCCTAGATGGAACGATTCATAATGCTAATAGGATTGGTATTATGATTATTAACAAAGGTTGCCTCCCTCCCCCTTCTAAATGACAGTGTGCCATAGTTGAAGAATGAAGCAAAGGAGAAGCAAACTTGACACTTCCCCCAGTGAATCCCAGACCAGGAGGATAAGAATCCAAAGAAAGAGGACTTATCTGACAAGTTAATTCAACCACACTTACGAACGAACAAGTGAGATGGGATGTTCCACTGTTGAGAGCTAAGTGAGACCCCCGTTGAGCTCAATCCATCCCTAAGGCTGAACTATCACTATATCATTGCCTTTAATCGAGTCTTCTCTCCTGTTAGTAGAAGCAGCCTTCAGGCCCCCTCTTTTGAAATAACGCCTTTTGCTTCCCATTCCACTTTCCTTGACAATTGCCCCTGCCCTCACGTCAAACAGGCCATCTTCAACACCTCCTCTGCTTTCTCGACCATTGGAGTGGAGAGAAAGAGTCATCCTCCAAATACCTCACAACTGAAGGGTTAGAGACGTAATCTTCTTCTTCCACATCCGAATTCAATGCCCCAGCCCTTGAAGCCTGGTCTCAGCCAACCACCAAAAATTATTCAGGCTAAGTCAATCTCTGGGTTTTTAAGTTTGTCTCGTTCAAAACTGGCCCATTTGAGTTGGCGAACGATGAAGGAAGCGGCCTCAAATATCTTTCTTTAGAAGAATCTGTTTGCGGGAAACTAGTTGGAGATGTTAGGCACATCACCAAGTTCAAAACCCTTCTCTAGTTGAACTTAACTGGAACTTTAGCAACCAACCCACAAGACAATCTAGGGTTCATGGCTTTCGAAATCCCCATGTGAAGCACATGAATATCTTTCTCCTTAGTTCTCTGACCACAAGACATGCTTAATGAAGCCTTCCCTATAGTGATCTGATGGGTAAGCAGAGAAACCTTACCAACTTCTTTCTCTTGCTTTGATGATCAAAACCTCACCAACCGACCAAAATAAAACCATCTTCTTTCCTTTAGACAGGGGAGGGAGGATGTTTGAGTGTGGAGTCCTTCCCCCTTAAAGGCTTCACTTTTAGATCTTTCTTTTGGTTTTTACTTGACCCCTCTCCTACGATTAAGTTCGTTTTTtACGGTTTATGGAGGACAAAAaTTCCAAAAAAAGGTTGAGTTATTTTCTTGGCAAGTTTTACTTGGGTGTTTGTACAAAGTGGATGGGATTGGGAGAAAGATGCCTTTGCTTTTGGGCCCTTGGTGTTGTATTCTTTGTTGAAAGGCGGAGGAAAACCTTAATCATCTTCTCGAGAAGTATGAATTTGCCAAATTTGCGGGGCATGATTTCTTTCAAGAGTTCGGTTCCGTGCTCACTTGGCAGAAGAATGTTCGTTTAATGATCGGGGAGTTCCTCTTTCATCCACCTTCAAAGAGAAAGACTGTTTTCTTTGGGATGTTGGGGTGTGCTATCTGTGGGATCTTTGGGGAGGGAAACAATAGTGTTTCTTGGTGTGGAGAGAGACCCTAGTGAGGTTTCATGTTTCTCTCAAATTTTTTTtGTAATTATTCTTTAGGTAATACCTTACTTAGTTGGAAACCCTTTCCTAAGGTGTTTTGTGTGCTTGATTTTTTTTTTttCTGTATGCTTTTGTATTCCTTCATGTTTTTCCGATGAAAGCAGCTGTTTGAAAAAaTAAAAAAaCAGAAGGTAAAGCTAAGTTCAGTGTATCTGGAAATGCACAGAAATTGCTCGTTATGCAGACTTGGCAAGGTGATCTTTTTtCTTTCAGGGAATTATGCTTCTTACTTGGTACCTGCAGCTGCTGTTGGAGCGATGGGATATTGCTACATGTGGTGGAAGGTGAAACTTTTTATTTCAGTTGACTGAAAAAAGGAGTATTTTTGTAGCAAGATTGACATTGGTAACAACATTTCTGCCTTTTGATCTAGCAGGGATTGTCATTTTCTGACGTAATGTTTGTGACAAAGCAAAACATGGCAAATGCTGTTTCGACTGTCTCTAAACAACTGGATAATGTGCATGAAGCACTGGCTGTAAGTGACTGGTTAGACATTGTGTAATGACCTTAAACAGGAATGCTAGTCTATGGTGGATGCATGGCTTTAATTTtAACCCATTTTTGGCTCCAGTCAACAAGGAGGCATCTGACAAAGAAGTTGGAGAACTTAGATTGGAGGCTAGATGAGGAGATCGAAACCACAAATCTTATTGCTAATAATGTAAGAGGAGAGCTACCTTCTTCCTTTTTtCTAATCTTGATAGATATAACATTCCTTTTTATACACAAATATGTAGATATTCCACTAATCATTTTCTCATTGTAAGAAGCATTCTATTAGATCCAATATAGATTTTTTAACTAAGATTGGTAAGAAATCATATTATATTTCTTTTACACTTTTATGGCTATTAAGAAGATCAAGTTGACAAGACCAACGCTTGTCTTTCAGAATTCCCTGTTGATGAAGCTTTCGTTCCTTGTATAAAGCCTTTCATCTAGCTGAAATTTCTCTTAATTCTGATATAAGAGACCATGAACCTTGTGAAATAAATCATATTCATAGAGTATAAAGTGAATGCAACATCCTTTTGATGTCTTATCTGCGTGCAGGTGGAGGAGGTTAAGTGTAACCTTTCTCAGATTGGTTTTGATGTTGAAACAATCCATCAAATGGTCTCACAATTGGTGAGTCACTTACTACCTTAAAACTCTTTTTTAGTGTGCAAGCCAAACCACGGTGCAAGATGTTCTTGAATTTCATCCCCACTGACCCCTTTGACAAACAGGAAGGAAAACTTGAGGTTCTTGAAAGGAAACAGAACGTCACAAATTCTGGTCTCTGGTATCTATGTCAAGCTGCAGAAGGTGTCAAAGGCCGCATAAGCGAAAAACTCTTCCCAGTGAGTAGTTTCCCTCGTCACTATCACTTCACGCTGAAAGCAAATCCTTCTCCCTGTGAAGTGGATTTTGTTTCATTAATATTTGGCAGGAAGTTGAGGCAAAGAAGATTGCAACAGTTAAATATGAGGAGAATCCCCTTAAGGTACGAGAATGCTGCACAAATATTGCGAGATAATTTGTATCTATTTCTGGACAGCATTAGAAATACCCAATATTTGTACAGGGACTGCAGTTCATTGCCGATACTAAAGACTCCATTGTGAAGAGAAATAGCCTCAACGAATTCAACGGTGAAAAAGTTGCGGTAGGAAGAACAAGAGTGTACAGGTCATATCCTGTTGGGATTGCTTTGGCACCGGGCATTATGGGCTGTGATACGTAATGTTTTCCTCCTTAAAAGTTGATTTCATTCTCGGTTTCCTATTGAGTCCATGAGAAGCATTTGTGATTTGCATATAAAGTAATGCCTTCATGGTAAGGTTTATAGGTTTTACGATAACACTTATATTTGTTGTATAAATTGTTTGAACAAATGGAACGAAAAaTATTGCACATCTCTT TGCTTTGTTTCAGACCCTCCCGTCTGGGCCTGCGTCTGCTACAGCTTAAAACGAAATTTCCCTCTTCGGTCCAATAGAGGGTAATCGACGACTTTCCTTGCTCGCGAAAAAGGAACAGCTTCGTGAAGATGGCATTACAAGCTGCTGGGGTTTCAACGTCTAAGGTTCTCATCCTCGTCGGAGCAGGGTTAACTGGTTCTGTTGTCTTAAGAAGTGGGCGATTGTCTGATCTGATATCGCAACTTCAGGAATTACTGAAGGGTGTGACTGAGGAAGAACTCTCTCCTAGCCCTTACAAGTATGATACTGCTGTTCTTGCTGCACAGATTCGGCAACTGACACAAGAGATCAGGGAGTTGACATTATCTGGTCCTGTAACCGTCTTTAATGGGAACTCTTCTTCTAGTGGGAATTATGCTTCTTACTTGGTACCTGCAGCTGCTGTTGGAGCGATGGGATATTGCTACATGTGGTGGAAGGGATTGTCATTTTCTGACGTAATGTTTGTGACAAAGCAAAACATGGCAAATGCTGTTTCGACTGTCTCTAAACAACTGGATAATGTGCATGAAGCACTGGCTTCAACAAGGAGGCATCTGACAAAGAAGTTGGAGAACTTAGATTGGAGGCTAGATGAGGAGATCGAAACCACAAATCTTATTGCTAATAATGTGGAGGAGGTTAAGTGTAACCTTTCTCAGATTGGTTTTGATGTTGAAACAATCCATCAAATGGTCTCACAATTGGAAGGAAAACTTGAGGTTCTTGAAAGGAAACAGAACGTCACAAATTCTGGTCTCTGGTATCTATGTCAAGCTGCAGAAGGTGTCAAAGGCCGCATAAGCGAAAAACTCTTCCCAGTGAGTAGTTTCCCTCGTCACTATCACTTCACGCTGAAAGCAAATCCTTCTCCCTGTGAAGTGGATTTTGTTTCATTAATATTTGGCAGGAAGTTGAGGCAAAGAAGATTGCAACAGTTAAATATGAGGAGAATCCCCTTAAGGGACTGCAGTTCATTGCCGATACTAAAGACTCCATTGTGAAGAGAAATAGCCTCAACGAATTCAACGGTGAAAAAGTTGCGGTAGGAAGAACAAGAGTGTACAGGTCATATCCTGTTGGGATTGCTTTGGCACCGGGCATTATGGGCTGTGATACGTAATGTTTTCCTCCTTAAAAGTTGATTTCATTCTCGGTTTCCTATTGAGTCCATGAGAAGCATTTGTGATTTGCATATAAAGTAATGCCTTCATGGTAAGGTTTATAGGTTTTACGATAACACTTATATTTGTTGTATAAATTGTTTGAACAAATGGAACGAAAAATATTGCACATCTCTT ATGGCATTACAAGCTGCTGGGGTTTCAACGTCTAAGGTTCTCATCCTCGTCGGAGCAGGGTTAACTGGTTCTGTTGTCTTAAGAAGTGGGCGATTGTCTGATCTGATATCGCAACTTCAGGAATTACTGAAGGGTGTGACTGAGGAAGAACTCTCTCCTAGCCCTTACAAGTATGATACTGCTGTTCTTGCTGCACAGATTCGGCAACTGACACAAGAGATCAGGGAGTTGACATTATCTGGTCCTGTAACCGTCTTTAATGGGAACTCTTCTTCTAGTGGGAATTATGCTTCTTACTTGGTACCTGCAGCTGCTGTTGGAGCGATGGGATATTGCTACATGTGGTGGAAGGGATTGTCATTTTCTGACGTAATGTTTGTGACAAAGCAAAACATGGCAAATGCTGTTTCGACTGTCTCTAAACAACTGGATAATGTGCATGAAGCACTGGCTTCAACAAGGAGGCATCTGACAAAGAAGTTGGAGAACTTAGATTGGAGGCTAGATGAGGAGATCGAAACCACAAATCTTATTGCTAATAATGTGGAGGAGGTTAAGTGTAACCTTTCTCAGATTGGTTTTGATGTTGAAACAATCCATCAAATGGTCTCACAATTGGAAGGAAAACTTGAGGTTCTTGAAAGGAAACAGAACGTCACAAATTCTGGTCTCTGGTATCTATGTCAAGCTGCAGAAGGTGTCAAAGGCCGCATAAGCGAAAAACTCTTCCCAGTGAGTAGTTTCCCTCGTCACTATCACTTCACGCTGAAAGCAAATCCTTCTCCCTGTGAAGTGGATTTTGTTTCATTAATATTTGGCAGGAAGTTGAGGCAAAGAAGATTGCAACAGTTAAATATGAGGAGAATCCCCTTAAGGGACTGCAGTTCATTGCCGATACTAAAGACTCCATTGTGA MALQAAGVSTSKVLILVGAGLTGSVVLRSGRLSDLISQLQELLKGVTEEELSPSPYKYDTAVLAAQIRQLTQEIRELTLSGPVTVFNGNSSSSGNYASYLVPAAAVGAMGYCYMWWKGLSFSDVMFVTKQNMANAVSTVSKQLDNVHEALASTRRHLTKKLENLDWRLDEEIETTNLIANNVEEVKCNLSQIGFDVETIHQMVSQLEGKLEVLERKQNVTNSGLWYLCQAAEGVKGRISEKLFPVSSFPRHYHFTLKANPSPCEVDFVSLIFGRKLRQRRLQQLNMRRIPLRDCSSLPILKTPL*
BLAST of Cucsa.087580.2 vs. TrEMBL
Match: A0A0A0LT32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G408370 PE=4 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 1.9e-131 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. TrEMBL
Match: W9RAB4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004043 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 5.5e-99 Identity = 188/257 (73.15%), Postives = 223/257 (86.77%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. TrEMBL
Match: A0A067KG73_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13782 PE=4 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 2.3e-97 Identity = 182/243 (74.90%), Postives = 218/243 (89.71%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. TrEMBL
Match: M5WT55_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008684mg PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 6.8e-97 Identity = 185/256 (72.27%), Postives = 214/256 (83.59%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. TrEMBL
Match: D7TEH0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g01690 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 4.4e-96 Identity = 188/244 (77.05%), Postives = 214/244 (87.70%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. TAIR10
Match: AT1G04960.2 (AT1G04960.2 Protein of unknown function (DUF1664)) HSP 1 Score: 283.5 bits (724), Expect = 1.5e-76 Identity = 140/224 (62.50%), Postives = 188/224 (83.93%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. TAIR10
Match: AT1G27000.1 (AT1G27000.1 Protein of unknown function (DUF1664)) HSP 1 Score: 197.6 bits (501), Expect = 1.1e-50 Identity = 98/221 (44.34%), Postives = 157/221 (71.04%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. TAIR10
Match: AT2G02730.1 (AT2G02730.1 Protein of unknown function (DUF1664)) HSP 1 Score: 182.6 bits (462), Expect = 3.7e-46 Identity = 93/242 (38.43%), Postives = 158/242 (65.29%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. TAIR10
Match: AT1G24267.2 (AT1G24267.2 Protein of unknown function (DUF1664)) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-25 Identity = 75/246 (30.49%), Postives = 126/246 (51.22%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. TAIR10
Match: AT1G24265.3 (AT1G24265.3 Protein of unknown function (DUF1664)) HSP 1 Score: 103.6 bits (257), Expect = 2.2e-22 Identity = 68/232 (29.31%), Postives = 114/232 (49.14%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. NCBI nr
Match: gi|449441670|ref|XP_004138605.1| (PREDICTED: uncharacterized protein LOC101208062 [Cucumis sativus]) HSP 1 Score: 476.9 bits (1226), Expect = 2.7e-131 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. NCBI nr
Match: gi|700208072|gb|KGN63191.1| (hypothetical protein Csa_2G408370 [Cucumis sativus]) HSP 1 Score: 476.9 bits (1226), Expect = 2.7e-131 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. NCBI nr
Match: gi|659111888|ref|XP_008455957.1| (PREDICTED: uncharacterized protein LOC103496021 [Cucumis melo]) HSP 1 Score: 463.8 bits (1192), Expect = 2.4e-127 Identity = 237/244 (97.13%), Postives = 241/244 (98.77%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. NCBI nr
Match: gi|703110051|ref|XP_010099477.1| (hypothetical protein L484_004043 [Morus notabilis]) HSP 1 Score: 369.0 bits (946), Expect = 7.9e-99 Identity = 188/257 (73.15%), Postives = 223/257 (86.77%), Query Frame = 1
BLAST of Cucsa.087580.2 vs. NCBI nr
Match: gi|802658714|ref|XP_012080677.1| (PREDICTED: uncharacterized protein LOC105640884 [Jatropha curcas]) HSP 1 Score: 363.6 bits (932), Expect = 3.3e-97 Identity = 182/243 (74.90%), Postives = 218/243 (89.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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