Cucsa.084620.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTCTGCTCTTGTTCTTTTTTTTCTTCTTCTTGTTGGCAGAAACGATTGACTGGTTTCACAGTTCTTGTCTCTATTTCTGATCAACCATGGCTAAGAAATCAGTAAAGTATTTCGTGGTATTTTACTTTAACCTAATCTCTTTCACCTATTTCGCATTCGGATTTTGATTTAGACATTTTGAGAAGTGTATATTTTGATTTTTTTGTAAATGAATCCAAACCAAATAGGTGGATGCATTCACTGACTCAGCGTTTAAGGGAAATCCAGCAGCTGTTTGTTTATTAGAGCAAGAAAGGGATGATAAATGGTTGGCTGATTTAGCCGCTGAGTTGAATATTTGCCAGACCTGTTATTTGATTCCTGTAAACGAAGAAGAAAAAGAAGAAATTGATGATTCAATTAATCCACCCAAATTTAGACTCAGATGGTTCAATCCTGTTGATGAGGTTTTTTTCTTTTACTGATAAGTTCGATTATTGTTTTGAATGCTACGTTTGTGTTTGATTAAAGTTTTGAACTAAATATCCTTTCCCGTTTAATTGTCATTTTTCAAAATTTACATTTTTTGGGTTGGTTCGGATCGAGTTGGTTCAACAATCATTCCATCGTTCTTTTTTATATTTCTTAAACCCAGATGACTTGTAATGAACAACATTTTGAGTTAGTCAGATCACTTATTAAAAATTTAACCATACAATTAGTAATGAGTTGAAGTTGTTTTTGGTAAATAAATGAAACAAGAGGAATTGTTATGAATAAAAAAATAAAACCATTTACAATATATCGATCAATTTTGCTTTAATTTGTAAATAGTTTTACTGTTTTGTTATTTTTCAAAATGTCGTCACATACAATAAATCAATTGATAATATTTTCATTTTTTTAACACAGCTCAAATCAAATGGGTTGATTGGATCTTTGGAATGAAGTTTTTTTAAATACCCTAATTTGAGTTTTTTTTTGTTGCTAAATTCCAAAAATAAAACCAAAATTTTAGACCTTTTTGGTACACCCTTTGTTCTTCAGTTTACTTTTTCTTTTAAACTTAAAGCCTAATTTCTTAGGGTTTCCTTCTTATCGTTTGTATAAGCAAAAGAGTTCACAAGCTTCTTTATTTGTTCTAAAAGTGTTTACTTTATAGTATGTTTGATAATGTTTTTGTTTTCCATTTTTTGTTTCACGTTTTTCATTTTTTATAAAAAGATATGAGACTATCTTGGATAACTATTTCTATTTTCTATTTCATGTTTTTCTCATTTGTTGTTTTCTTGTTTATTCTTTTTTTAGAAGAATCGAGACTATATCTGATAACTATTCTTTTTTCTTGTTCTCTATTTTCTGTTGTCCTTGTTTATTCTTTTTTTAGAACAAAAGCAGGATAATGTTCGATAACTATTTTGGCTTGCTGTTTCTTGTTCCTTGTTTTTTTAGAAACAAAAATGAAAAACGAGACTATGTTTGACAACTATATATTCATGTTTCTTGTTTTCTATTTCTCTTTTTTTTTTCTCTCTTTTTTATTTCGTGTTTCTCCTTTTATATTTCTCATTCCTTGTTTTTTTTTTTTAGAAATAGAAACGAAACTATGTGTGATAATAATTATCTCTTTTCTCGGAAAAGAAAATAAAACAAAGTTGAGAAATGTAAAAAAAAGTAGATAAAAGTTGAGAATTGAACTGAGACCTTAATTCAAAAGTGAATATAAAATGTCTCTCCACCGATTAGCTAAAATTTAAAAGATAATGAAAATAGAATGAAATAAAATGGAGACAGAACTACTAGTAGAACTTCGTATCAACATTCCTTCTACTCTTAAATTTCTTTATTATATATGACCAGAATGTTTTCAATAGTGTAGAAACAGTTCGAATTAGTGACCAAATTGGACTAAACCAAAAAAAAATAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCTTTGGAACATGAATTTACTTTATAGGTGATTAAATGTTTGTATTGGAGTTAATGTGTTGTGGGAACAGAAAGTCACTAAATTCCAAAATCTTTGTGACTGTCTTGTGATTCACCATTATTCGTTCTCTGTGTGGTGTGAATGAATGCCAGATTTTTGGACAAAGAAATATTTGGTTTTGAAATTCTTTTAAACCGAATCCAACTTTATTTGGTTTTGATTCAATTTTTAAAATATGTTCCTAAAAAAACGTTTCAGTTTGTGTGGTTTTAATTCCACCCCTAGTTTTCAAAACTAAACTAATTTGAAATGGTTAAACCTTAACTAATATATTCTATGTAAAAACAACTAGAATTAAAGATTTAAAATCCCAATAAAATGATTGAATTATTGGAGAATTAAATGTTTGGTTAGAGCTTTAAATCGAACCTGAAGTAGTCTCAAAGTCATGCATGTTGAAGAAATAATGACGCTAGTCTCATATAAGACTATTTTCAAAGTGAAAGTTTTCTTATATGAAAACGAAAAATAAAGCATGGAGCTGGAACAAGGACGGGAAAGTCCTCGTTTCGTGAAAATCCCTAGTTACTTGTATTCGCAACTAAATGAATTGTAACATAATGTTTTGGTTGATGTAAATCTTGTTGTTTTTTATTAAGATAAACATTTTTTACAGGTAAAGCAGCTTTGTGGTCATGCAACGTTGGCAGCTGCACACATACTTTTTTCAACTGGTTTGGTAAATTCAAATATTATTGAGTTTTCCACACTTTCAGGAATTCTAACTGCTAAAAAGGTTCCAGATGTCAAGCTTCTTGAGGTTTCAAGTAATGCTCTTCTTAATAGTGGTGAATCACAAGACAGTTACTTCATTGAAATGGATTTCCCAGCTATTCCTACTGTTGAACTCAATTCTGCTGTTGATGTTTCTTTAATCTCCAAAGCTTTGAATGGTGCTTCTATAGTTGACATTAAGACGTGTAACATGAAACCCAATAGACTCTTGGTAAGTAAGCCCTTAGTTTATCTTTGATGTTTTGTTCACAACCCTACTTTTCATTCTTATAATTAAGATTGAGAAACAAAGAAAGCGTAGCCCATCCATGATCGTCGGTCTAGTGAGAAAAAGAAAAAACAAACGAGAGAGATGGAGGAACAACTAAGAGGTCATGAGTTAAGTGCAAGTTCTTCTCTAAGATTAGCTAGAGTGCTTAAGGTGGCTTAGATACTCATAGATATATAAATAAAAAAGGAGAAACGAAGAAAGCCTAGACAATAACATCAACAACATCAAGGGAGAGAGTCAGTCTTAGAATACAAGAATATATATATTAAGGTGTGTCACTCCTCTAAACCAGCGTTTTTGCAGGTTGTTCTTCCATCAGAAAAAGATGTTGTAGATTTTCAACCTAATTATGATGAGATACGAAAGTGTCCTGGATCTGGGTTAATCATAAGTGGATTAGCCCCTGCTGAGTCGAAATTTGACTTCTATACTCGACACTTCGCTCCCAAAGTAGGGATCGACGAGGTACAGTACAATCTCAATCTTCTAGTGCTGTACATAGATTGTATATATGCAGCATGCTTTGAGATGAAGCCAATATATGTCATTAGCTTGAACGATCAATGTTCTATTAATGGTTAAATATTTGGTTGTTGTTGCATATTATATACAGGATCCTGTTTGTGGAAGTGCACATTGTGCGTTGGCAGTCTACTGGGCCAATAAGTTGGGCAAATCTGATTTTGTTGCTTTTATGGTACTTTCTCTCTTCCTCCCACTTAAGAGTTACGTAACCAACATGTTGATCAATCCATTGCTTATATCACATGCAGGGGGTGTTCAAACAAAATTCAATAATCACAAAAAACCCATCAACTCCAACCTAATTCCTGCAGTCTAGACTGGGGTTATCAACTCATTTGACTTGGGTTAGGTTTAAATAAATAAAAATTATTATGGGTTAGGTTTAAATAAATAAAAATTATTATGGGTTAGGTTGGTTAATAGACTTGTCAATTCAAACCTCCAATAAAATAATTAAATCAAAAATAAAAATTAATAAATAAATAGAGTAACTCGAACTGATTGACTTGAGTTCATATATTTTTATTTTTTTATATAAAAAACTATTTTGGATCGAAGAAATTTACCATCCAAATAATTGAGTCAGATTTAAAGTCTTTATGCCCTACCCACTACCTATTTGTTTAGGGTAACTATAATGCATAACAATTTTAGAATTAATAACTAAGTATATAACAATATTATATTTTAGAAAAATTATAAATATAGAAAGTCGGTCAAAATTTATTACTTATAGACCATAATCCAAATAAATCATAAGAGTCTATCGTTGATAAAATTATAACTCAATATTGGTCTACTTCTCATAGATTTTGCTATATTTACAATTTTTGGAGAATTATGCTATACACTTCATTATTATTTCTAAAAATGATGCATTCCATTATGATTATTTTTTTTAAACAAAATTAACAAGATGGAGTTGGGTATTTTTGTTTGACCCAAAATAAATTCAAGAACTTAAATTAACTCAAATAAGCTTATAATAACTTAGGGTAATTATGATGAATTAATCACAATTTTACAATAATAATTAAATGTTTACCCCAATTTAAAAGATTGTAAATATAATAAAGTTCTATCAAAGCTATCGTTGGTAAACACCTGTGATCCATCATCTATTACTCATAGATCAATATGTTCTACTAGTGATTAACTTCTATTATATGTTTTCAACTTTTTAAAAATATTTTGGTATGTGAGAATATATTTTGAGCTTATTTGCTGTATTTAATTTGCAACCGTGTAACTTTAACTCAATCCATATAATTTGAATGAAGTTGTTTAGATTTTGTAGTTTTTTTTTAACTTTTAAAAGCATATTTTTAGGCATCACCGAGGAGTGGAATATTACACATTCATCTTGACGACCAAAAACAAAGGGTTATGTTGCGAGGGAAAGCTATTACTACGTTGGAAGGTTTTGTTTTGGTTTAA GTCTGCTCTTGTTCTTTTTTTTCTTCTTCTTGTTGGCAGAAACGATTGACTGGTTTCACAGTTCTTGTCTCTATTTCTGATCAACCATGGCTAAGAAATCAGTAAAGTATTTCGTGGTGGATGCATTCACTGACTCAGCGTTTAAGGGAAATCCAGCAGCTGTTTGTTTATTAGAGCAAGAAAGGGATGATAAATGGTTGGCTGATTTAGCCGCTGAGTTGAATATTTGCCAGACCTGTTATTTGATTCCTGTAAACGAAGAAGAAAAAGAAGAAATTGATGATTCAATTAATCCACCCAAATTTAGACTCAGATGGTTCAATCCTGTTGATGAGGTAAAGCAGCTTTGTGGTCATGCAACGTTGGCAGCTGCACACATACTTTTTTCAACTGGTTTGGTAAATTCAAATATTATTGAGTTTTCCACACTTTCAGGAATTCTAACTGCTAAAAAGGTTCCAGATGTCAAGCTTCTTGAGGTTTCAAGTAATGCTCTTCTTAATAGTGGTGAATCACAAGACAGTTACTTCATTGAAATGGATTTCCCAGCTATTCCTACTGTTGAACTCAATTCTGCTGTTGATGTTTCTTTAATCTCCAAAGCTTTGAATGGTGCTTCTATAGTTGACATTAAGACGTGTAACATGAAACCCAATAGACTCTTGGTTGTTCTTCCATCAGAAAAAGATGTTGTAGATTTTCAACCTAATTATGATGAGATACGAAAGTGTCCTGGATCTGGGTTAATCATAAGTGGATTAGCCCCTGCTGAGTCGAAATTTGACTTCTATACTCGACACTTCGCTCCCAAAGTAGGGATCGACGAGGATCCTGTTTGTGGAAGTGCACATTGTGCGTTGGCAGTCTACTGGGCCAATAAGTTGGGCAAATCTGATTTTGTTGCTTTTATGGCATCACCGAGGAGTGGAATATTACACATTCATCTTGACGACCAAAAACAAAGGGTTATGTTGCGAGGGAAAGCTATTACTACGTTGGAAGGTTTTGTTTTGGTTTAA ATGGCTAAGAAATCAGTAAAGTATTTCGTGGTGGATGCATTCACTGACTCAGCGTTTAAGGGAAATCCAGCAGCTGTTTGTTTATTAGAGCAAGAAAGGGATGATAAATGGTTGGCTGATTTAGCCGCTGAGTTGAATATTTGCCAGACCTGTTATTTGATTCCTGTAAACGAAGAAGAAAAAGAAGAAATTGATGATTCAATTAATCCACCCAAATTTAGACTCAGATGGTTCAATCCTGTTGATGAGGTAAAGCAGCTTTGTGGTCATGCAACGTTGGCAGCTGCACACATACTTTTTTCAACTGGTTTGGTAAATTCAAATATTATTGAGTTTTCCACACTTTCAGGAATTCTAACTGCTAAAAAGGTTCCAGATGTCAAGCTTCTTGAGGTTTCAAGTAATGCTCTTCTTAATAGTGGTGAATCACAAGACAGTTACTTCATTGAAATGGATTTCCCAGCTATTCCTACTGTTGAACTCAATTCTGCTGTTGATGTTTCTTTAATCTCCAAAGCTTTGAATGGTGCTTCTATAGTTGACATTAAGACGTGTAACATGAAACCCAATAGACTCTTGGTTGTTCTTCCATCAGAAAAAGATGTTGTAGATTTTCAACCTAATTATGATGAGATACGAAAGTGTCCTGGATCTGGGTTAATCATAAGTGGATTAGCCCCTGCTGAGTCGAAATTTGACTTCTATACTCGACACTTCGCTCCCAAAGTAGGGATCGACGAGGATCCTGTTTGTGGAAGTGCACATTGTGCGTTGGCAGTCTACTGGGCCAATAAGTTGGGCAAATCTGATTTTGTTGCTTTTATGGCATCACCGAGGAGTGGAATATTACACATTCATCTTGACGACCAAAAACAAAGGGTTATGTTGCGAGGGAAAGCTATTACTACGTTGGAAGGTTTTGTTTTGGTTTAA MAKKSVKYFVVDAFTDSAFKGNPAAVCLLEQERDDKWLADLAAELNICQTCYLIPVNEEEKEEIDDSINPPKFRLRWFNPVDEVKQLCGHATLAAAHILFSTGLVNSNIIEFSTLSGILTAKKVPDVKLLEVSSNALLNSGESQDSYFIEMDFPAIPTVELNSAVDVSLISKALNGASIVDIKTCNMKPNRLLVVLPSEKDVVDFQPNYDEIRKCPGSGLIISGLAPAESKFDFYTRHFAPKVGIDEDPVCGSAHCALAVYWANKLGKSDFVAFMASPRSGILHIHLDDQKQRVMLRGKAITTLEGFVLV*
BLAST of Cucsa.084620.1 vs. Swiss-Prot
Match: Y283_BACHD (Uncharacterized isomerase BH0283 OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=BH0283 PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.2e-43 Identity = 116/307 (37.79%), Postives = 166/307 (54.07%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. Swiss-Prot
Match: PBLD2_MOUSE (Phenazine biosynthesis-like domain-containing protein 2 OS=Mus musculus GN=Pbld2 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36 Identity = 108/307 (35.18%), Postives = 153/307 (49.84%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. Swiss-Prot
Match: PBLD1_MOUSE (Phenazine biosynthesis-like domain-containing protein 1 OS=Mus musculus GN=Pbld1 PE=1 SV=2) HSP 1 Score: 154.1 bits (388), Expect = 2.6e-36 Identity = 108/308 (35.06%), Postives = 154/308 (50.00%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. Swiss-Prot
Match: PBLD_RAT (Phenazine biosynthesis-like domain-containing protein OS=Rattus norvegicus GN=Pbld PE=2 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35 Identity = 108/310 (34.84%), Postives = 153/310 (49.35%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. Swiss-Prot
Match: PBLD_HUMAN (Phenazine biosynthesis-like domain-containing protein OS=Homo sapiens GN=PBLD PE=1 SV=2) HSP 1 Score: 150.6 bits (379), Expect = 2.8e-35 Identity = 111/309 (35.92%), Postives = 151/309 (48.87%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. TrEMBL
Match: A0A0A0K5Q5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390070 PE=4 SV=1) HSP 1 Score: 617.5 bits (1591), Expect = 9.1e-174 Identity = 307/310 (99.03%), Postives = 310/310 (100.00%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. TrEMBL
Match: A0A0A0K566_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393460 PE=4 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 9.8e-144 Identity = 262/310 (84.52%), Postives = 282/310 (90.97%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. TrEMBL
Match: A0A0A0K8X4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390060 PE=4 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 3.9e-132 Identity = 244/310 (78.71%), Postives = 272/310 (87.74%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. TrEMBL
Match: A0A0A0K7K6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G393450 PE=4 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 1.0e-124 Identity = 233/311 (74.92%), Postives = 265/311 (85.21%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. TrEMBL
Match: V4VVN0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021404mg PE=4 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.4e-105 Identity = 199/310 (64.19%), Postives = 242/310 (78.06%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. TAIR10
Match: AT4G02860.1 (AT4G02860.1 Phenazine biosynthesis PhzC/PhzF protein) HSP 1 Score: 330.5 bits (846), Expect = 1.1e-90 Identity = 175/311 (56.27%), Postives = 221/311 (71.06%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. TAIR10
Match: AT1G03210.1 (AT1G03210.1 Phenazine biosynthesis PhzC/PhzF protein) HSP 1 Score: 315.1 bits (806), Expect = 4.9e-86 Identity = 172/311 (55.31%), Postives = 213/311 (68.49%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. TAIR10
Match: AT4G02850.1 (AT4G02850.1 phenazine biosynthesis PhzC/PhzF family protein) HSP 1 Score: 298.5 bits (763), Expect = 4.7e-81 Identity = 165/328 (50.30%), Postives = 219/328 (66.77%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. NCBI nr
Match: gi|778727750|ref|XP_004148890.2| (PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Cucumis sativus]) HSP 1 Score: 617.5 bits (1591), Expect = 1.3e-173 Identity = 307/310 (99.03%), Postives = 310/310 (100.00%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. NCBI nr
Match: gi|449436559|ref|XP_004136060.1| (PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Cucumis sativus]) HSP 1 Score: 517.7 bits (1332), Expect = 1.4e-143 Identity = 262/310 (84.52%), Postives = 282/310 (90.97%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. NCBI nr
Match: gi|659101003|ref|XP_008451379.1| (PREDICTED: phenazine biosynthesis-like domain-containing protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 504.2 bits (1297), Expect = 1.6e-139 Identity = 254/314 (80.89%), Postives = 279/314 (88.85%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. NCBI nr
Match: gi|659101007|ref|XP_008451381.1| (PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Cucumis melo]) HSP 1 Score: 483.8 bits (1244), Expect = 2.3e-133 Identity = 247/310 (79.68%), Postives = 273/310 (88.06%), Query Frame = 1
BLAST of Cucsa.084620.1 vs. NCBI nr
Match: gi|778727753|ref|XP_004148891.2| (PREDICTED: phenazine biosynthesis-like domain-containing protein 2 [Cucumis sativus]) HSP 1 Score: 479.2 bits (1232), Expect = 5.6e-132 Identity = 244/310 (78.71%), Postives = 272/310 (87.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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