Cucsa.084350.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACATTGGTGATTATAGAACAGTACAGAGATGAGTTTTGTCATCGGGTCAAACCTCTAGAATCGGGTCGATTTGGGAATTTGACGATTAAAGATCATAATCGATTTAGATTTCGCCCTACCCCATTGGAGATTTCTTCAATTCCTGTTTATTGTTTTTCTTCCCCCAAAACACCACCCTCTTGTGCTCCGATTCCGATTAATGAAAAAAATTGTGTTAACGAGAGCATTGATTTTGATGCACATTGCTGTTATAAGAGACTATCTTTTCCTGAACTTTGGGCTGGACCAACTTACTCAAATTCACCCCCTGCAAGTTCATTGCCAATCCCCAAATTTTCAATCCGAGGAAATAGAACAGTATCACTCGAATTACCCACAAATTCAGTTGAAAAAATTCACCCAATTGTGAAATCTGCACCACCATCCCCAACTAGGGGCCATACTCATCCTTCTTCAAGAGAGCCATGTCATGGTGCTGATTGTGCTACAAGAACACTTAGACGAATCCTTAACCTCGATGTTAACTCTGAATGA ATGGAAACATTGGTGATTATAGAACAGTACAGAGATGAGTTTTGTCATCGGGTCAAACCTCTAGAATCGGGTCGATTTGGGAATTTGACGATTAAAGATCATAATCGATTTAGATTTCGCCCTACCCCATTGGAGATTTCTTCAATTCCTGTTTATTGTTTTTCTTCCCCCAAAACACCACCCTCTTGTGCTCCGATTCCGATTAATGAAAAAAATTGTGTTAACGAGAGCATTGATTTTGATGCACATTGCTGTTATAAGAGACTATCTTTTCCTGAACTTTGGGCTGGACCAACTTACTCAAATTCACCCCCTGCAAGTTCATTGCCAATCCCCAAATTTTCAATCCGAGGAAATAGAACAGTATCACTCGAATTACCCACAAATTCAGTTGAAAAAATTCACCCAATTGTGAAATCTGCACCACCATCCCCAACTAGGGGCCATACTCATCCTTCTTCAAGAGAGCCATGTCATGGTGCTGATTGTGCTACAAGAACACTTAGACGAATCCTTAACCTCGATGTTAACTCTGAATGA ATGGAAACATTGGTGATTATAGAACAGTACAGAGATGAGTTTTGTCATCGGGTCAAACCTCTAGAATCGGGTCGATTTGGGAATTTGACGATTAAAGATCATAATCGATTTAGATTTCGCCCTACCCCATTGGAGATTTCTTCAATTCCTGTTTATTGTTTTTCTTCCCCCAAAACACCACCCTCTTGTGCTCCGATTCCGATTAATGAAAAAAATTGTGTTAACGAGAGCATTGATTTTGATGCACATTGCTGTTATAAGAGACTATCTTTTCCTGAACTTTGGGCTGGACCAACTTACTCAAATTCACCCCCTGCAAGTTCATTGCCAATCCCCAAATTTTCAATCCGAGGAAATAGAACAGTATCACTCGAATTACCCACAAATTCAGTTGAAAAAATTCACCCAATTGTGAAATCTGCACCACCATCCCCAACTAGGGGCCATACTCATCCTTCTTCAAGAGAGCCATGTCATGGTGCTGATTGTGCTACAAGAACACTTAGACGAATCCTTAACCTCGATGTTAACTCTGAATGA METLVIIEQYRDEFCHRVKPLESGRFGNLTIKDHNRFRFRPTPLEISSIPVYCFSSPKTPPSCAPIPINEKNCVNESIDFDAHCCYKRLSFPELWAGPTYSNSPPASSLPIPKFSIRGNRTVSLELPTNSVEKIHPIVKSAPPSPTRGHTHPSSREPCHGADCATRTLRRILNLDVNSE*
BLAST of Cucsa.084350.1 vs. TrEMBL
Match: A0A0A0K5M6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388310 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 1.4e-102 Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Cucsa.084350.1 vs. TrEMBL
Match: W9QBH2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002441 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 8.2e-34 Identity = 94/205 (45.85%), Postives = 118/205 (57.56%), Query Frame = 1
BLAST of Cucsa.084350.1 vs. TrEMBL
Match: A0A0A0KHP6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410620 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 3.1e-33 Identity = 98/207 (47.34%), Postives = 119/207 (57.49%), Query Frame = 1
BLAST of Cucsa.084350.1 vs. TrEMBL
Match: A0A061DXK6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_004330 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.4e-28 Identity = 88/211 (41.71%), Postives = 108/211 (51.18%), Query Frame = 1
BLAST of Cucsa.084350.1 vs. TrEMBL
Match: A0A067FRD9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027722mg PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 2.3e-28 Identity = 98/224 (43.75%), Postives = 124/224 (55.36%), Query Frame = 1
BLAST of Cucsa.084350.1 vs. TAIR10
Match: AT4G02715.1 (AT4G02715.1 unknown protein) HSP 1 Score: 100.9 bits (250), Expect = 8.4e-22 Identity = 77/208 (37.02%), Postives = 102/208 (49.04%), Query Frame = 1
BLAST of Cucsa.084350.1 vs. NCBI nr
Match: gi|778727656|ref|XP_011659294.1| (PREDICTED: uncharacterized protein LOC105436159 [Cucumis sativus]) HSP 1 Score: 380.2 bits (975), Expect = 2.0e-102 Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Cucsa.084350.1 vs. NCBI nr
Match: gi|659100911|ref|XP_008451331.1| (PREDICTED: uncharacterized protein LOC103492654 [Cucumis melo]) HSP 1 Score: 335.9 bits (860), Expect = 4.4e-89 Identity = 161/179 (89.94%), Postives = 167/179 (93.30%), Query Frame = 1
BLAST of Cucsa.084350.1 vs. NCBI nr
Match: gi|703061961|ref|XP_010086616.1| (hypothetical protein L484_002441 [Morus notabilis]) HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33 Identity = 94/205 (45.85%), Postives = 118/205 (57.56%), Query Frame = 1
BLAST of Cucsa.084350.1 vs. NCBI nr
Match: gi|700192703|gb|KGN47907.1| (hypothetical protein Csa_6G410620 [Cucumis sativus]) HSP 1 Score: 149.8 bits (377), Expect = 4.5e-33 Identity = 98/207 (47.34%), Postives = 119/207 (57.49%), Query Frame = 1
BLAST of Cucsa.084350.1 vs. NCBI nr
Match: gi|502115373|ref|XP_004495188.1| (PREDICTED: uncharacterized protein LOC101500946 [Cicer arietinum]) HSP 1 Score: 148.3 bits (373), Expect = 1.3e-32 Identity = 92/198 (46.46%), Postives = 114/198 (57.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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