Cucsa.079730.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGTGTCATTGGAGCAATGATATTATTGATACAGCATTTGCCTCATCTTCATTCTACAGTTGCCAAGCGGGAACAATTTTATGACAATTTTGATTCAAAGTTACGCCCTTTTCCCCATCTTTCCAGTTTTAAATTCAATTCTAAACCTTCCTTGAGGTGCTTTTGCAGCAAGGACCAATCTACTCATGAAGCTTTTCAGGTGAATTCCAAAAATAATTCTTTATGTTTCTTCTTTTCTTTTGGGTATCTCTGGATCTCTAGTTGAAATGTTCAATTTTGTTTGTTCGAACATATCTGGTACTGTTACCTCTCATTCCAAAGTTCGACTGCCATTTTCTATTTCCAATTAGGGCTTCTCTGCTCTGCCACGGGACACCCCTTGGGACAATGATACTGTTTGGAGCACAATGGCTCTTTATATTTTCAGTTTGCATATTCCTCTGAGCCTTGGAAGCTTGTCTTTGGTTTCCAAATTAATGCATGTGCCTATTCTTGATCCTCAAACTAAGGTTTGTGCTTCTTTAGGTTATATCTTTTGAATTTGAACCATGACTCTGAACTAAACTTCATATATATATATATATATTACAACCTTAAGTGCATTATGGCAAATGGGTTTGGCTTGAGTTTTATGTCATGTGATAAACATTTATGTGATTATCTTTACCATCATCAGATGCTTAGTTTGGTTTGTTTCTAATTGTAGTGACAATTACTCTTCTTGGCTCATTTCTACAGTTTATTCATTTGCAATGCAGGCACTATCAAGGCTTGCAATTCAAACTCTAGAGTTCATTCTGACCCTTCTTCTACTGAAGCTCACTGCTAAGCCAAACTACAGATTCAGATATTTCTTTAGAGATAATGAGTTATGCAACAAAAGGAATTGGATCTTTGCATCAGCGTTTGGAGTTGGGTTCCTATTCTCATTAGTTTTCCTTACATCACTTCTTGCAGAGAGCGTGATTGGACCGAAGGTCAGTATGATGACTTTCTGTCTGCGGCCTACTTTTGCATTTCCTATTGAATTTTCTAAAATTGCTTCATATCGCTTGGTAATAGCATTGTTCGGTCTGTATCAAAAGTGTAAAGTTTATAGGACTACAAGGTAAATGGTCGCATATATAGAATGTGTAAATAATTTTTTTAGTTGTTTTTACTTCTATCATATCAAAACCATATTCATCATTGTCAATATTTGAAAAATCTTTAGATTTTCTTCAGACTTGCCAATTTTATGGACTTTTTTATAACTCAGAAGTGTGATTTCGCGTTTACAAGATAAAAGTTCCACTCAATTGTAGGCCGTAAGCAACCTTGTGCTGAAAGAGATTCTTGACTGCAGCAACATCTCAAGAACAGCATGCTTCATAGCATATTGTGTTGTGACTCCGCTCTTAGAAGAGACTGTATACAGAGGCTTTCTATTAGCATCAATCTCATCTGAGATGCAATGGCAGCAAGCAGTTGTAATTAGTTCTGCAGTCTTCAGCGCAGCTCACTTGTCTGTTGAAAATTCCTTACAGCTCTTCATCATTGGGTGTGTCCTAGGATGCTCATATTGTTGGACTGGCAATTTAAGGTCTTCAATCCTCATACATTCTTTGTACAATGCAATGTCCCTTCTTTTAACTTACCTATCCTAATGATTACATA AGAGTGTCATTGGAGCAATGATATTATTGATACAGCATTTGCCTCATCTTCATTCTACAGTTGCCAAGCGGGAACAATTTTATGACAATTTTGATTCAAAGTTACGCCCTTTTCCCCATCTTTCCAGTTTTAAATTCAATTCTAAACCTTCCTTGAGGTGCTTTTGCAGCAAGGACCAATCTACTCATGAAGCTTTTCAGGGCTTCTCTGCTCTGCCACGGGACACCCCTTGGGACAATGATACTGTTTGGAGCACAATGGCTCTTTATATTTTCAGTTTGCATATTCCTCTGAGCCTTGGAAGCTTGTCTTTGGTTTCCAAATTAATGCATGTGCCTATTCTTGATCCTCAAACTAAGGCACTATCAAGGCTTGCAATTCAAACTCTAGAGTTCATTCTGACCCTTCTTCTACTGAAGCTCACTGCTAAGCCAAACTACAGATTCAGATATTTCTTTAGAGATAATGAGTTATGCAACAAAAGGAATTGGATCTTTGCATCAGCGTTTGGAGTTGGGTTCCTATTCTCATTAGTTTTCCTTACATCACTTCTTGCAGAGAGCGTGATTGGACCGAAGGCCGTAAGCAACCTTGTGCTGAAAGAGATTCTTGACTGCAGCAACATCTCAAGAACAGCATGCTTCATAGCATATTGTGTTGTGACTCCGCTCTTAGAAGAGACTGTATACAGAGGCTTTCTATTAGCATCAATCTCATCTGAGATGCAATGGCAGCAAGCAGTTGTAATTAGTTCTGCAGTCTTCAGCGCAGCTCACTTGTCTGTTGAAAATTCCTTACAGCTCTTCATCATTGGGTGTGTCCTAGGATGCTCATATTGTTGGACTGGCAATTTAAGGTCTTCAATCCTCATACATTCTTTGTACAATGCAATGTCCCTTCTTTTAACTTACCTATCCTAATGATTACATA ATGATATTATTGATACAGCATTTGCCTCATCTTCATTCTACAGTTGCCAAGCGGGAACAATTTTATGACAATTTTGATTCAAAGTTACGCCCTTTTCCCCATCTTTCCAGTTTTAAATTCAATTCTAAACCTTCCTTGAGGTGCTTTTGCAGCAAGGACCAATCTACTCATGAAGCTTTTCAGGGCTTCTCTGCTCTGCCACGGGACACCCCTTGGGACAATGATACTGTTTGGAGCACAATGGCTCTTTATATTTTCAGTTTGCATATTCCTCTGAGCCTTGGAAGCTTGTCTTTGGTTTCCAAATTAATGCATGTGCCTATTCTTGATCCTCAAACTAAGGCACTATCAAGGCTTGCAATTCAAACTCTAGAGTTCATTCTGACCCTTCTTCTACTGAAGCTCACTGCTAAGCCAAACTACAGATTCAGATATTTCTTTAGAGATAATGAGTTATGCAACAAAAGGAATTGGATCTTTGCATCAGCGTTTGGAGTTGGGTTCCTATTCTCATTAGTTTTCCTTACATCACTTCTTGCAGAGAGCGTGATTGGACCGAAGGCCGTAAGCAACCTTGTGCTGAAAGAGATTCTTGACTGCAGCAACATCTCAAGAACAGCATGCTTCATAGCATATTGTGTTGTGACTCCGCTCTTAGAAGAGACTGTATACAGAGGCTTTCTATTAGCATCAATCTCATCTGAGATGCAATGGCAGCAAGCAGTTGTAATTAGTTCTGCAGTCTTCAGCGCAGCTCACTTGTCTGTTGAAAATTCCTTACAGCTCTTCATCATTGGGTGTGTCCTAGGATGCTCATATTGTTGGACTGGCAATTTAAGGTCTTCAATCCTCATACATTCTTTGTACAATGCAATGTCCCTTCTTTTAACTTACCTATCCTAA MILLIQHLPHLHSTVAKREQFYDNFDSKLRPFPHLSSFKFNSKPSLRCFCSKDQSTHEAFQGFSALPRDTPWDNDTVWSTMALYIFSLHIPLSLGSLSLVSKLMHVPILDPQTKALSRLAIQTLEFILTLLLLKLTAKPNYRFRYFFRDNELCNKRNWIFASAFGVGFLFSLVFLTSLLAESVIGPKAVSNLVLKEILDCSNISRTACFIAYCVVTPLLEETVYRGFLLASISSEMQWQQAVVISSAVFSAAHLSVENSLQLFIIGCVLGCSYCWTGNLRSSILIHSLYNAMSLLLTYLS*
BLAST of Cucsa.079730.1 vs. TrEMBL
Match: A0A0A0K4Q9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G291730 PE=4 SV=1) HSP 1 Score: 600.5 bits (1547), Expect = 1.1e-168 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. TrEMBL
Match: F6H5A8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g03910 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 3.4e-93 Identity = 177/301 (58.80%), Postives = 228/301 (75.75%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. TrEMBL
Match: A0A059DG42_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01810 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 2.0e-85 Identity = 163/271 (60.15%), Postives = 200/271 (73.80%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. TrEMBL
Match: W9RAJ8_9ROSA (Clathrin light chain 1 OS=Morus notabilis GN=L484_011578 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 7.7e-85 Identity = 163/271 (60.15%), Postives = 206/271 (76.01%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. TrEMBL
Match: M5W021_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016497mg PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 3.6e-82 Identity = 154/220 (70.00%), Postives = 184/220 (83.64%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. TAIR10
Match: AT2G20725.1 (AT2G20725.1 CAAX amino terminal protease family protein) HSP 1 Score: 265.0 bits (676), Expect = 5.6e-71 Identity = 135/275 (49.09%), Postives = 185/275 (67.27%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. TAIR10
Match: AT1G14270.1 (AT1G14270.1 CAAX amino terminal protease family protein) HSP 1 Score: 84.3 bits (207), Expect = 1.4e-16 Identity = 77/253 (30.43%), Postives = 118/253 (46.64%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. TAIR10
Match: AT5G60750.1 (AT5G60750.1 CAAX amino terminal protease family protein) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-11 Identity = 49/141 (34.75%), Postives = 75/141 (53.19%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. NCBI nr
Match: gi|449443851|ref|XP_004139689.1| (PREDICTED: uncharacterized protein LOC101217192 isoform X1 [Cucumis sativus]) HSP 1 Score: 600.5 bits (1547), Expect = 1.6e-168 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. NCBI nr
Match: gi|659123928|ref|XP_008461908.1| (PREDICTED: uncharacterized protein LOC103500400 isoform X1 [Cucumis melo]) HSP 1 Score: 565.1 bits (1455), Expect = 7.5e-158 Identity = 283/300 (94.33%), Postives = 290/300 (96.67%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. NCBI nr
Match: gi|778726484|ref|XP_011659107.1| (PREDICTED: uncharacterized protein LOC101217192 isoform X3 [Cucumis sativus]) HSP 1 Score: 388.3 bits (996), Expect = 1.2e-104 Identity = 194/209 (92.82%), Postives = 197/209 (94.26%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. NCBI nr
Match: gi|778726480|ref|XP_011659105.1| (PREDICTED: uncharacterized protein LOC101217192 isoform X2 [Cucumis sativus]) HSP 1 Score: 365.9 bits (938), Expect = 6.6e-98 Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 1
BLAST of Cucsa.079730.1 vs. NCBI nr
Match: gi|778726480|ref|XP_011659105.1| (PREDICTED: uncharacterized protein LOC101217192 isoform X2 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 2.5e-28 Identity = 64/70 (91.43%), Postives = 64/70 (91.43%), Query Frame = 1
HSP 2 Score: 362.5 bits (929), Expect = 7.3e-97 Identity = 179/266 (67.29%), Postives = 215/266 (80.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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