Cucsa.079310.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTAGCATGTTCAAAAGTGTACGAGGAGGCAAAAATGTTACCTGTGTTACTTTCCGCTGAATTATTTCGTAGATGTGATGTATGGCCTAGAGGATTTCAGAAATTGGGGCCAACTGATCAAAATATTGCTCTATATTTCTTTCCAGATGGGGAAAGGTGATGAGTTTTATGCTCCTACATTTTATTTTTGTCTGTCTGTCTGTCTGCCTACTGCTTCAATTTATGAACTTATTACTTTTTTTCGCGGCAGCCAAAAGGCATTTGATCTTCTGGTTAATGCAATGATGTCCCAGGACCTAGCCATGAAGGCTGTGTTGAAGAATGCAGAGCTATTAGTTTTTACTTCCTCCATGTTACCAATGAGATATTGGAGTAAGGCCACGTATAAATTTTTTATAATTCGGTTTGTGGATTCAATCTTTGTAAATTGAATTACTTCGAGTTTCCTTTTCACTGGAGACAGTAATCGTTTTTTTTACGATTTTTGGGGTGAGAAGGAGAACATCTATCTGAATGCATGTTTTCTGATTTGCTCTGAACTTCTCATGCGATTCACATAGCATGTCATTCCAGGTTTTTGTATGGCTATATTGAAAGCACTGAAATATCATGTGCAGGATTTCAAACAAAGTACTATTTGTGGGGCGTCTTTCGTGGAAAGCAAACTGCAAAACCAAGAAATGTTGTCGCTTCTGAGGAGAGAACTTTTGCCGAGTCAACTTGTATGCAAGGCCCTATAAGTCCCGTAAGTCCTTTAAGCAACACCAGTACTCTTCATTCTGGTTCACTCTCTCCTCGATCATGACTTGTTGAAATCAGTACTATGTCTCTAAGTGGATGTAGATTCGAACTCTGCAATTGATTTCAGGACCAATATACTTCCAGTTGCTGACGGAAGGATGATGCCTAAGAATTTAGACGTGAGGTTGGAAATGGTGGGAGCTCACAAAGTTCTCTCACGCTTTAAGTTTGAAACAATTTTGGAGGATCAGTAGATTGTCTTTCTTTACCGGTGTTAGATGTACATTGTTCCGCCCCGACCTCGGCTCTTATGAGGCTATTTCAGTAACTTTCCATTGGTTTCTTCACAGCTCCAATGCCATAATGCTAAGGAAAGCGAAGTGACTAAGTACTTTCACCTTAACACCGAAGGCCAATCATAG CTTAGCATGTTCAAAAGTGTACGAGGAGGCAAAAATGTTACCTGTGTTACTTTCCGCTGAATTATTTCGTAGATGTGATGTATGGCCTAGAGGATTTCAGAAATTGGGGCCAACTGATCAAAATATTGCTCTATATTTCTTTCCAGATGGGGAAAGCCAAAAGGCATTTGATCTTCTGGTTAATGCAATGATGTCCCAGGACCTAGCCATGAAGGCTGTGTTGAAGAATGCAGAGCTATTAGTTTTTACTTCCTCCATGTTACCAATGAGATATTGGAGATTTCAAACAAAGTACTATTTGTGGGGCGTCTTTCGTGGAAAGCAAACTGCAAAACCAAGAAATGTTGTCGCTTCTGAGGAGAGAACTTTTGCCGAGTCAACTTGTATGCAAGGCCCTATAAGTCCCCTCCAATGCCATAATGCTAAGGAAAGCGAAGTGACTAAGTACTTTCACCTTAACACCGAAGGCCAATCATAG CTTAGCATGTTCAAAAGTGTACGAGGAGGCAAAAATGTTACCTGTGTTACTTTCCGCTGAATTATTTCGTAGATGTGATGTATGGCCTAGAGGATTTCAGAAATTGGGGCCAACTGATCAAAATATTGCTCTATATTTCTTTCCAGATGGGGAAAGCCAAAAGGCATTTGATCTTCTGGTTAATGCAATGATGTCCCAGGACCTAGCCATGAAGGCTGTGTTGAAGAATGCAGAGCTATTAGTTTTTACTTCCTCCATGTTACCAATGAGATATTGGAGATTTCAAACAAAGTACTATTTGTGGGGCGTCTTTCGTGGAAAGCAAACTGCAAAACCAAGAAATGTTGTCGCTTCTGAGGAGAGAACTTTTGCCGAGTCAACTTGTATGCAAGGCCCTATAAGTCCCCTCCAATGCCATAATGCTAAGGAAAGCGAAGTGACTAAGTACTTTCACCTTAACACCGAAGGCCAATCATAG LACSKVYEEAKMLPVLLSAELFRRCDVWPRGFQKLGPTDQNIALYFFPDGESQKAFDLLVNAMMSQDLAMKAVLKNAELLVFTSSMLPMRYWRFQTKYYLWGVFRGKQTAKPRNVVASEERTFAESTCMQGPISPLQCHNAKESEVTKYFHLNTEGQS*
BLAST of Cucsa.079310.1 vs. TrEMBL
Match: A0A0A0K6I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G318450 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 8.8e-72 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. TrEMBL
Match: M5VGW7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021510mg PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 8.0e-33 Identity = 72/109 (66.06%), Postives = 89/109 (81.65%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. TrEMBL
Match: A0A061FI18_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_035488 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.2e-31 Identity = 76/139 (54.68%), Postives = 100/139 (71.94%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. TrEMBL
Match: V4TDF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000763mg PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.5e-31 Identity = 65/115 (56.52%), Postives = 91/115 (79.13%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. TrEMBL
Match: A0A068VCL5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00012006001 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.5e-31 Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. TAIR10
Match: AT1G43770.2 (AT1G43770.2 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 119.4 bits (298), Expect = 2.0e-27 Identity = 61/114 (53.51%), Postives = 79/114 (69.30%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. TAIR10
Match: AT3G02890.1 (AT3G02890.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 82.0 bits (201), Expect = 3.6e-16 Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. TAIR10
Match: AT5G61090.1 (AT5G61090.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein) HSP 1 Score: 49.3 bits (116), Expect = 2.6e-06 Identity = 32/109 (29.36%), Postives = 52/109 (47.71%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. NCBI nr
Match: gi|778726591|ref|XP_011659124.1| (PREDICTED: uncharacterized protein LOC101213907 isoform X2 [Cucumis sativus]) HSP 1 Score: 277.7 bits (709), Expect = 1.3e-71 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. NCBI nr
Match: gi|700189261|gb|KGN44494.1| (hypothetical protein Csa_7G318450 [Cucumis sativus]) HSP 1 Score: 277.7 bits (709), Expect = 1.3e-71 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. NCBI nr
Match: gi|778726587|ref|XP_011659123.1| (PREDICTED: uncharacterized protein LOC101213907 isoform X1 [Cucumis sativus]) HSP 1 Score: 277.7 bits (709), Expect = 1.3e-71 Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. NCBI nr
Match: gi|659124005|ref|XP_008461943.1| (PREDICTED: uncharacterized protein LOC103500424 isoform X2 [Cucumis melo]) HSP 1 Score: 256.5 bits (654), Expect = 3.0e-65 Identity = 123/136 (90.44%), Postives = 129/136 (94.85%), Query Frame = 1
BLAST of Cucsa.079310.1 vs. NCBI nr
Match: gi|659124007|ref|XP_008461944.1| (PREDICTED: uncharacterized protein LOC103500424 isoform X3 [Cucumis melo]) HSP 1 Score: 251.9 bits (642), Expect = 7.4e-64 Identity = 123/137 (89.78%), Postives = 129/137 (94.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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