Cucsa.079200.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTTTGTTGACACCAAAAATGGCCGTTGAAAATAGTTCCAACCTCCCTCGAATCCCTCCGCCTCCACCTTTTAAGCCATCGCCCTTATCTCCACCGCCGTCGCCCGACGGTCACACAGCAATCATTGTAATCGTTTTTATTTCCTTAGGCTCTTGCCTTTTCTTCGTCGCTTTCGTTGCAGCTGCCGTTTGTTGCTTTATCAAAAAGAGAAAGAAGAAGTCATGTCCTCAAGAAGTTGTAGAGGCCATCCATATCGATGGACATCGGAAAGTCCACGAAGATGTTGCTGAGGTCGGTCATGGGCAGCAGGCAGTGGTGGTGACGATCGAGGATGATCTTCACATAGACGAAATTGTTAAGAAGAAAGAGCATGGACATGGACATGGCTTGCATGGTAAGCAACATGAAGGAGGCAGCCATAATAATAATTCTACCACAATGGAAGTAGCAGCTTCTTCTTCTAGTACTTCTTGA TCTTTGTTGACACCAAAAATGGCCGTTGAAAATAGTTCCAACCTCCCTCGAATCCCTCCGCCTCCACCTTTTAAGCCATCGCCCTTATCTCCACCGCCGTCGCCCGACGGTCACACAGCAATCATTGTAATCGTTTTTATTTCCTTAGGCTCTTGCCTTTTCTTCGTCGCTTTCGTTGCAGCTGCCGTTTGTTGCTTTATCAAAAAGAGAAAGAAGAAGTCATGTCCTCAAGAAGTTGTAGAGGCCATCCATATCGATGGACATCGGAAAGTCCACGAAGATGTTGCTGAGGTCGGTCATGGGCAGCAGGCAGTGGTGGTGACGATCGAGGATGATCTTCACATAGACGAAATTGTTAAGAAGAAAGAGCATGGACATGGACATGGCTTGCATGGTAAGCAACATGAAGGAGGCAGCCATAATAATAATTCTACCACAATGGAAGTAGCAGCTTCTTCTTCTAGTACTTCTTGA TCTTTGTTGACACCAAAAATGGCCGTTGAAAATAGTTCCAACCTCCCTCGAATCCCTCCGCCTCCACCTTTTAAGCCATCGCCCTTATCTCCACCGCCGTCGCCCGACGGTCACACAGCAATCATTGTAATCGTTTTTATTTCCTTAGGCTCTTGCCTTTTCTTCGTCGCTTTCGTTGCAGCTGCCGTTTGTTGCTTTATCAAAAAGAGAAAGAAGAAGTCATGTCCTCAAGAAGTTGTAGAGGCCATCCATATCGATGGACATCGGAAAGTCCACGAAGATGTTGCTGAGGTCGGTCATGGGCAGCAGGCAGTGGTGGTGACGATCGAGGATGATCTTCACATAGACGAAATTGTTAAGAAGAAAGAGCATGGACATGGACATGGCTTGCATGGTAAGCAACATGAAGGAGGCAGCCATAATAATAATTCTACCACAATGGAAGTAGCAGCTTCTTCTTCTAGTACTTCTTGA SLLTPKMAVENSSNLPRIPPPPPFKPSPLSPPPSPDGHTAIIVIVFISLGSCLFFVAFVAAAVCCFIKKRKKKSCPQEVVEAIHIDGHRKVHEDVAEVGHGQQAVVVTIEDDLHIDEIVKKKEHGHGHGLHGKQHEGGSHNNNSTTMEVAASSSSTS*
BLAST of Cucsa.079200.1 vs. TrEMBL
Match: A0A0A0K4D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G320040 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 1.4e-82 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. TrEMBL
Match: W9RTU8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023880 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.5e-26 Identity = 66/134 (49.25%), Postives = 91/134 (67.91%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. TrEMBL
Match: W9QU73_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007306 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.5e-26 Identity = 64/130 (49.23%), Postives = 89/130 (68.46%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. TrEMBL
Match: M5VIZ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb021634mg PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.0e-24 Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. TrEMBL
Match: M5VIZ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb021634mg PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 8.3e-06 Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 1
HSP 2 Score: 119.4 bits (298), Expect = 4.0e-24 Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. TAIR10
Match: AT5G48920.1 (AT5G48920.1 tracheary element differentiation-related 7) HSP 1 Score: 95.9 bits (237), Expect = 2.4e-20 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. TAIR10
Match: AT1G43790.1 (AT1G43790.1 tracheary element differentiation-related 6) HSP 1 Score: 82.0 bits (201), Expect = 3.5e-16 Identity = 39/93 (41.94%), Postives = 66/93 (70.97%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. NCBI nr
Match: gi|700189272|gb|KGN44505.1| (hypothetical protein Csa_7G320040 [Cucumis sativus]) HSP 1 Score: 313.5 bits (802), Expect = 2.1e-82 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. NCBI nr
Match: gi|659123107|ref|XP_008461492.1| (PREDICTED: uncharacterized protein LOC103500076 [Cucumis melo]) HSP 1 Score: 299.7 bits (766), Expect = 3.1e-78 Identity = 144/151 (95.36%), Postives = 146/151 (96.69%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. NCBI nr
Match: gi|703078084|ref|XP_010090776.1| (hypothetical protein L484_007306 [Morus notabilis]) HSP 1 Score: 125.6 bits (314), Expect = 7.9e-26 Identity = 64/130 (49.23%), Postives = 89/130 (68.46%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. NCBI nr
Match: gi|703103476|ref|XP_010097739.1| (hypothetical protein L484_023880 [Morus notabilis]) HSP 1 Score: 125.6 bits (314), Expect = 7.9e-26 Identity = 66/134 (49.25%), Postives = 91/134 (67.91%), Query Frame = 1
BLAST of Cucsa.079200.1 vs. NCBI nr
Match: gi|694405787|ref|XP_009377729.1| (PREDICTED: proline-rich receptor-like protein kinase PERK2 [Pyrus x bretschneideri]) HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25 Identity = 64/124 (51.61%), Postives = 86/124 (69.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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