Cucsa.078940.3 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTTtCTTGAAGGAGGGgAAAAGGAAAaTAAAACCTTCATTTTTAAAAGACGTTTTGGTGCCTCCATTTTCCTTTTTAATTCTTCTCTTTTTTGTGAACTCTCAGATCCCTCTCTTCTCTTCTATTTTTCTTCTTCCGACGAGCACTCCGGCGTTCCTCAACCTCCCACCAACGTCTGGGGCCTTCACCGTTCTATTCAAGCTATAACAGCATTCAGCGACGCTAAACATCTAACTCCGGCGGTGCCGGCGGAAGCTTCACAGCAAGGGTAATTTCCCTTTtCTTTCAACTGGTCACTGCTTTTTTtATTtGGGGTTCAAGCCGCAATGTTTTTTTACTTCGATTTAGACTGCAAACCACCCATCAATCTCATAATTCAACACTCGTTGTTCCAGTATTTGAGTCCAATACCGAATGTTGTGTTTATGAGTTGTAAGATTTGGGTTTTATACTCCGTTGGATCTTCCCGTCAGTTCGACTTTTACAAATCTGAACCTTTGATGTTGCCATTCTAATCTGCTTACTCAGGTTATGGATCGCAGCTGATTTTAAGATAATGCAAAAAATTGTTTAGGTTTAAAGCTGATATTGCATTGCTTCATATCGTTAGATTTCTTAGATTTTATTTCTGGGTGTAGCGACCCGTTATTTTGGTTCAGTGCTAGGAACATGTTTTGGTTGGATTCTTCAGAACATATTGTAAAAAGTTGTGGGGTTGATTCATATATATATATTATATAAATATTTATGTATGTATATGTATTTATATATTTCTTTTCATTTTCAATTTGAAACCAGTTCATATTTGTTTCAACTTTGCTGGTGCGCGTGAAATTTAGCTATGTCTACCTCTGCGATTGATGCTCTTCCCAAGGGTGGGTTTAGTTTTGATCTCTGCAGAAGAAATGATATGCTTGCAAAGAAGGGTTTTAAATCTCCGTCTTACCTTAAGACTGGAACTACCATTGTGGGTTTGATATTTGAGGTAATCGATTGCATTTAGGGTGTTGCATTCTTAACTTCTATAGCCAAATGTTGTCCTTTCAGTCATTAGTTCTGTAGAGATCCATTGCCACCATGATCAATATTTGAAATTGTCTTTCCTTTCTTTTAATTTGAGTTCACTTTTATTTCTCTATCAGTTTCTGGAAATTGGCTTTTTTTAGCTTACCTTAATTAATCTTCCTACAATGAAGTCTGAGGTTGTAAATTGACATTGATAAGCCTTGTAAGGAGCGATTTTCCATTGAAAAACTCCAAATGTAATTTAGGAGTGTATAGGCAACTTGATTTTTTtATGTTGAGCGCCCTTTTTACTTGTTTTATTACACTATAGTGCTTGTAGTCTAGTCGTCAATGTTCAGTTATAATTTATAAATATACCAAATGAAATTTGAAAGAGAAAACTGGGAAGTGAAGCAAGCTTGAGTTACTAGCATTGTGAGTTCAAGTTATGCTATTTATATAAGAAGACTGCCTCCCATGCCCATATATATTTTACCTTTTGGGTAAGAAATGGAGCTCTCATTAAAAGAATGAAAGAATTTAAAAGGGCATAGAAAAATATGAAGAaAAAAAAGAATGAGCTCATTGACTAACACCAATGAGATTGAACATACTAGCAACCCCAAAGCATATGATGATTAAGGTCCTCTAGTTGCCTTCAAAGAATGCACCATTGATTGTATAATGCAATGAATTATTGTCTTCGAATGCGATCGATGGTATTGGAACTCCCATGATAAAACACCACAAAAAGAATTTGACCTTATTTGGGATTTTAACTTTCCGGAGATAGGAGAAGAGAGAAACCTCAAACCAGAGTCAGCTTGGGTGGAGAAGTAAGAAATTGTGGAAAAATTAATTACAAGACAAATGCCTTAAGGTTGGTTGTCCAAAACCTAACCTCCTTAGGTAGGGCTAGTCTTAAAGGAGGGAAAGAAGAACCACCCCTTTTTGTTGCCTCTTTTTCAGAAAAAAaTGATGACGAAAAGCCAAGGAGATTGAATGAGAAAGGAAAAATTGAACTCACTTAATGCAACCTTTTATTGGCGAGATTTTATAACTAACAAAACAATGAACAATGAGGGCTTACTATTGACCTATCAATCCTTCCAGATGTGTACTTTTGAGCCATCCCCAATGGAACAAGTTATAGACTGAGAAAAGAAAACCAATCTAGATGTAATAACTTGCCAAAGATTTCTATTTTCTACTAGTGTAGTGTCCTCGTAGACACAACCATCTGAGACCCATCCACATGGGTGTGGTTCATATATGCTCACAATAAGTACTACAAAACATTGTGCTCCATGAAGAATTGACATGTTAAACAATAAAAAAGAGAACATTAGGTTTACATGGAAAACCCTAGAACAAGAAGAGAAAACCACGATAGAGAATCTCTTTTATTATTTTCACCCGTAATGAAAGTTACAAAAGAAGACAAATTTATAGGCACTAGCAAGCCCTAATACAAAAATGGAAATAAACTTAGGGTGAAGTAAAATACTAAAATACCCTCGGGGCTATAAACTATCAACAAAATCCCTTATTTCAGACAACAACCATTTTGCCAAACAAGTCCTAGTCCCACCAGTTCGCCACCACCTCCCACTTAACTAAATGTGACCCTCCTCCCTCATTGAACCCTTCCCACAATAATTTTTtCATCATTCTTTCAATATCTCTTAATGCCTATATATTGAAGCCTAGCAGATCTGCTTTGTATAAATAAAAAaTTATTGGGAAGAAGTTTTAATGGCACTAAAATTGCTATCTTCTGGTTCTTTTGTGCGAAGAAATTATTTAAGCATTCCCCTTGTCAACAATGCTCATTTTCTAGAAGATGACTGAATTGAATAGTCTATTGTCAAGTTCATAAATGTAACACTTGTCACTGGATCCTTGTTTTCAATTATGTTGTCACACACTGAAGCTTCTTTTGTAAATTCAAAATAATATTTtATTTtATGTTCCTGATTTTCTTTAGGATGGGGTTATTCTTGGGGCAGATACACGCGCTACTGAAGGCCCTATTGTTGCTGACAAAAATTGTGAGAAAATACATTACATGGCACCAAACATATATTGTTGTGGAGCAGGAACTGCTGCTGATACTGAAGCAGTAACAGGTAATTGGTGATACCTTGGTCCTACACGTTAAGATTCATCATATTGTTACTAAAAAaGAACTAATTCTATTATTCTTGGATTTTTAAGACATGGTTAGCTCCCAATTGCAATTACATCGCTACCACACTGGTCGAGAATCAAGAGTTGTTACTGCACTGACTCTTCTCAAGAAACACCTTTTTGGGTATAACTCTTTCCATCTACTTGGGATTTCTTCCGTATTTCTAATCTGTCTGTAGCATGAGATTTAAGTCTTCCCATCCATTATCTTCTCCAGTTATCAAGGTTATGTTTCAGCCGCTTTGGTGCTTGGTGGGGTTGATGTTACTGGACCTCATTTACATACTGTGAGTTTTGTCCTGGAAAACAAACAGTTTTGGGTTGCATAATTTGCCATCTTTTAATTCTCTACTTCATTTGCAGATCTATCCTCATGGATCCACTGACACCTTGCCATTTGCTACAATGGGATCGGGTTCTCTAGCTGCCATGGCTGTATTCGAATCAAAGTACAAAGAAGGCCTGACTGTAAGTTCATGGCTCGTGCTTATATTGATACAGATAAATTTGACAACATGGTGTATCTTATTTGTGGCAATCATTCTTTCTTTTTCTATCTGCCATGCTGATTGGTGGGATTTTTATTTCCTTGTTGCAGAGGGATGAAGGGATTCGACTTGTAACCGAGGCGATATGTTCTGGGATATTTAATGATTTGGGAAGTGGAAGCAACGTTGACGTTTGTGTTATTACCAAGGTTCATGATCTTAATATGCCTTGATTTCTTTGAAGATAATAAGGAAGAATTTGCATCTAAAAAGTATTTGGACTATTTTCTGTTTATTTCTTTGGGTGTTGTAGGGTCAAAAGGATTATCTAAGAAACCACCTCTTGCCGAATCCTCGAACGTACGTCAGTTCGAAGGGTTATTCCTTCCCCAAGAAAACAGGTTAGTCATTTGTTTACTCAGCATGTCCACATACTTTCATGCTTGGTTTCTCTTTCCACAACCCTTGCTTCCCCATTGCTCTACTGATGACTCGTGCTTTCTCTAACTGCAGAGGTTCTGTTGACAAAGATTATGCCATTGAAGGAAAAGGTGGAAATAATCGAAGGAGGCGATGCTATGGAGGAGTGAGACTGATGAAAACATGGATTTGCTGCTCCCGGGGAATTTCTAAGTATGGTTTTCTTCCTCTCTTCTCTCAAGTGGACATTACTAGAAAATTCAGTTTGGCCTTTAGTTCATGTTGTCAACGACTTGATTTAAACTAATCAATATTTCCAGCCCAAGAGGGCTGTTAGAGCCAGTCTGTTAGTTCAAATCGCTTAGACACTTTAGAATTTGTCAACTTTGTTCTGTATGATCTTGGGTATCTTTTACATCTAAATGAATATTTAGTGTCTTCGACAGTGATTCATATGGTAGTTGATGTTGGTACTATTTACAAGTTTTTtCTGTACAAGGACGATAATACGGAGATAGGAGATCGGACCTCCAAACTCTATGGAGGGAGGTCAGCTCAAGTACCATAGAGCTAAGCTCACTTTGAGCTATTTCAAGATGTCTGTTTCCCATATATGAATTTTCATTATAAATGTTACTTCCTTGGAAGGTCC TGTTTTCTTGAAGGAGGGGAAAAGGAAAATAAAACCTTCATTTTTAAAAGACGTTTTGGTGCCTCCATTTTCCTTTTTAATTCTTCTCTTTTTTGTGAACTCTCAGATCCCTCTCTTCTCTTCTATTTTTCTTCTTCCGACGAGCACTCCGGCGTTCCTCAACCTCCCACCAACGTCTGGGGCCTTCACCGTTCTATTCAAGCTATAACAGCATTCAGCGACGCTAAACATCTAACTCCGGCGGTGCCGGCGGAAGCTTCACAGCAAGGTTCATATTTGTTTCAACTTTGCTGGTGCGCGTGAAATTTAGCTATGTCTACCTCTGCGATTGATGCTCTTCCCAAGGGTGGGTTTAGTTTTGATCTCTGCAGAAGAAATGATATGCTTGCAAAGAAGGGTTTTAAATCTCCGTCTTACCTTAAGACTGGAACTACCATTGTGGGTTTGATATTTGAGATACACGCGCTACTGAAGGCCCTATTGTTGCTGACAAAAATTGTGAGAAAATACATTACATGGCACCAAACATATATTGTTGTGGAGCAGGAACTGCTGCTGATACTGAAGCAGTAACAGACATGGTTAGCTCCCAATTGCAATTACATCGCTACCACACTGGTCGAGAATCAAGAGTTGTTACTGCACTGACTCTTCTCAAGAAACACCTTTTTGGTTATCAAGGTTATGTTTCAGCCGCTTTGGTGCTTGGTGGGGTTGATGTTACTGGACCTCATTTACATACTATCTATCCTCATGGATCCACTGACACCTTGCCATTTGCTACAATGGGATCGGGTTCTCTAGCTGCCATGGCTGTATTCGAATCAAAGTACAAAGAAGGCCTGACTAGGGATGAAGGGATTCGACTTGTAACCGAGGCGATATGTTCTGGGATATTTAATGATTTGGGAAGTGGAAGCAACGTTGACGTTTGTGTTATTACCAAGGGTCAAAAGGATTATCTAAGAAACCACCTCTTGCCGAATCCTCGAACGTACGTCAGTTCGAAGGGTTATTCCTTCCCCAAGAAAACAGAGGTTCTGTTGACAAAGATTATGCCATTGAAGGAAAAGGTGGAAATAATCGAAGGAGGCGATGCTATGGAGGAGTGAGACTGATGAAAACATGGATTTGCTGCTCCCGGGGAATTTCTAAGTATGGTTTTCTTCCTCTCTTCTCTCAAGTGGACATTACTAGAAAATTCAGTTTGGCCTTTAGTTCATGTTGTCAACGACTTGATTTAAACTAATCAATATTTCCAGCCCAAGAGGGCTGTTAGAGCCAGTCTGTTAGTTCAAATCGCTTAGACACTTTAGAATTTGTCAACTTTGTTCTGTATGATCTTGGGTATCTTTTACATCTAAATGAATATTTAGTGTCTTCGACAGTGATTCATATGGTAGTTGATGTTGGTACTATTTACAAGTtttttctgtacaaggacgataatacggagataggagatcggacctccaaactctatggagggaggtcagctcaagtaccatagagctaagctcactttgAGCTATTTCAAGATGTCTGTTTCCCATATATGAATTTTCATTATAAATGTTACTTCCTTGGAAGGTCC ATGGCACCAAACATATATTGTTGTGGAGCAGGAACTGCTGCTGATACTGAAGCAGTAACAGACATGGTTAGCTCCCAATTGCAATTACATCGCTACCACACTGGTCGAGAATCAAGAGTTGTTACTGCACTGACTCTTCTCAAGAAACACCTTTTTGGTTATCAAGGTTATGTTTCAGCCGCTTTGGTGCTTGGTGGGGTTGATGTTACTGGACCTCATTTACATACTATCTATCCTCATGGATCCACTGACACCTTGCCATTTGCTACAATGGGATCGGGTTCTCTAGCTGCCATGGCTGTATTCGAATCAAAGTACAAAGAAGGCCTGACTAGGGATGAAGGGATTCGACTTGTAACCGAGGCGATATGTTCTGGGATATTTAATGATTTGGGAAGTGGAAGCAACGTTGACGTTTGTGTTATTACCAAGGGTCAAAAGGATTATCTAAGAAACCACCTCTTGCCGAATCCTCGAACGTACGTCAGTTCGAAGGGTTATTCCTTCCCCAAGAAAACAGAGGTTCTGTTGACAAAGATTATGCCATTGAAGGAAAAGGTGGAAATAATCGAAGGAGGCGATGCTATGGAGGAGTGA MAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFGYQGYVSAALVLGGVDVTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAVFESKYKEGLTRDEGIRLVTEAICSGIFNDLGSGSNVDVCVITKGQKDYLRNHLLPNPRTYVSSKGYSFPKKTEVLLTKIMPLKEKVEIIEGGDAMEE*
BLAST of Cucsa.078940.3 vs. Swiss-Prot
Match: PSB7A_ARATH (Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1 PE=1 SV=2) HSP 1 Score: 357.1 bits (915), Expect = 1.3e-97 Identity = 173/198 (87.37%), Postives = 188/198 (94.95%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. Swiss-Prot
Match: PSB7B_ARATH (Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2 PE=1 SV=2) HSP 1 Score: 356.7 bits (914), Expect = 1.7e-97 Identity = 175/199 (87.94%), Postives = 189/199 (94.97%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. Swiss-Prot
Match: PSB7_DICDI (Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7 PE=3 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 8.1e-60 Identity = 116/189 (61.38%), Postives = 143/189 (75.66%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. Swiss-Prot
Match: PSB7_HUMAN (Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 7.6e-58 Identity = 112/191 (58.64%), Postives = 143/191 (74.87%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. Swiss-Prot
Match: PSB7_RAT (Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.3e-57 Identity = 113/196 (57.65%), Postives = 146/196 (74.49%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. TrEMBL
Match: A0A0A0K9R5_CUCSA (Proteasome subunit beta type OS=Cucumis sativus GN=Csa_7G325720 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 1.5e-108 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. TrEMBL
Match: A0A0A0KRZ6_CUCSA (Proteasome subunit beta type OS=Cucumis sativus GN=Csa_5G630760 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 4.0e-106 Identity = 193/198 (97.47%), Postives = 196/198 (98.99%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. TrEMBL
Match: A0A0D2NER9_GOSRA (Proteasome subunit beta type OS=Gossypium raimondii GN=B456_001G267100 PE=3 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 5.4e-103 Identity = 187/198 (94.44%), Postives = 193/198 (97.47%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. TrEMBL
Match: A0A0D2M3M0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G267100 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 5.4e-103 Identity = 187/198 (94.44%), Postives = 193/198 (97.47%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. TrEMBL
Match: A0A061ECD7_THECC (Proteasome subunit beta type OS=Theobroma cacao GN=TCM_017013 PE=3 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.2e-102 Identity = 188/198 (94.95%), Postives = 191/198 (96.46%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. TAIR10
Match: AT3G27430.2 (AT3G27430.2 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein) HSP 1 Score: 357.1 bits (915), Expect = 7.2e-99 Identity = 173/198 (87.37%), Postives = 188/198 (94.95%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. TAIR10
Match: AT5G40580.1 (AT5G40580.1 20S proteasome beta subunit PBB2) HSP 1 Score: 356.7 bits (914), Expect = 9.4e-99 Identity = 175/199 (87.94%), Postives = 189/199 (94.97%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. TAIR10
Match: AT4G31300.2 (AT4G31300.2 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein) HSP 1 Score: 68.6 bits (166), Expect = 5.1e-12 Identity = 43/144 (29.86%), Postives = 72/144 (50.00%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. NCBI nr
Match: gi|449443766|ref|XP_004139648.1| (PREDICTED: proteasome subunit beta type-7-A [Cucumis sativus]) HSP 1 Score: 400.2 bits (1027), Expect = 2.1e-108 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. NCBI nr
Match: gi|659131099|ref|XP_008465510.1| (PREDICTED: proteasome subunit beta type-7-A [Cucumis melo]) HSP 1 Score: 394.8 bits (1013), Expect = 8.8e-107 Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. NCBI nr
Match: gi|700197196|gb|KGN52373.1| (hypothetical protein Csa_5G630760 [Cucumis sativus]) HSP 1 Score: 392.1 bits (1006), Expect = 5.7e-106 Identity = 193/198 (97.47%), Postives = 196/198 (98.99%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. NCBI nr
Match: gi|778707049|ref|XP_011655962.1| (PREDICTED: proteasome subunit beta type-7-A [Cucumis sativus]) HSP 1 Score: 392.1 bits (1006), Expect = 5.7e-106 Identity = 193/198 (97.47%), Postives = 196/198 (98.99%), Query Frame = 1
BLAST of Cucsa.078940.3 vs. NCBI nr
Match: gi|823128913|ref|XP_012445202.1| (PREDICTED: proteasome subunit beta type-7-A [Gossypium raimondii]) HSP 1 Score: 381.7 bits (979), Expect = 7.7e-103 Identity = 187/198 (94.44%), Postives = 193/198 (97.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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