Cucsa.073360.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAAGCTCACAGAATTCTATCAGTCTTTGAAAACCATCTCCAATGGATTTTGACAGCAATATCAGATTTACTTAGAGACCGGTTCAAGGTTATCAAGAACTCCCTCCAAGAATCCAAGATTACTATCAAGAACTTCAAGAATGGAGCTCTATTGATGATGAAACTCAAGAAAGGTTAGTAAATAATCAAGATAGAAGGTTCCTGCCACGTTTTGATGATAGAAGGGAGCTGGCCGAATATAAAATGAAAATAGACTTGCCTAGCTACGATGGTAAGAGATATAGAAATTTTTTTAGATTGGCTCAAGAATACTGATTTTTTTTAATTACATGAACTCACTCAAGGGAAAGAAGGTGCATTTAGTTACTTTGAAGTTGAACGCTGGAGCTTGAGCTTGGTGGGAACAAATCGAAGTCAATAGGAGGAGAAATGGTAAAAGATCCATTGCTTCTTGGGAGAAAATGAAGAAGTTGATGAAAGCTCGGTTTCTTCCACCCAACTATGAACAAACTCTCTACAACCGATATCAAAACTGCCGGCTAGGAACTCAAACTATAGCAGATTACATTGAAGAATTTCACCGATGAGGGGCTAGAACGAATCTGATGGAGAATGAACATCTCATTGGTTGGTTTGTTGGAGGATTGAGGTTTGATATAAAAGAAAATGTTAAACTTCAACCTTTCCTAACCCTTTCTGATGCTATCACTTATGCAAAACCTGTAGAGGAGATTATTGAACTAGGTTCAAGAAAGAATACCAGAAGAAGCCCCTGGAATATCAATACTACCAGCAAGACTACAGCTACAAACTCTTCTCTTACTTAGTCCACTGAAAAGCAAGAGAAAGACAATACAAGTGATCCAAATGGGAAGAAGACTGAAGCAATTCCAAGAAACAAACAGAGAACGTGTATCAAGGGCCTAATATGAGTAAATGCTTTCGTTATGGACAAACTGGCTATCTTTCCAACTCTTGCCCTAAAAGAAAGACCGTAGCCATTCTAGAGGAAGATGAAGACCTCGTTGAGGAACAAGAAGGAAATTTTGATCAAGATGAAGAGATCCTTGAGCCGGATAAAGGGGAAAGACTCTTGTGTACTTCAAAGAGTACTAATTGCACCTAAAAATGACAACTCCACCAGCAATGGCATAGTCTTTCCAAGACCCATTGCACTGTTCAAAGTAAGGTATGCAACATGATTATTGATAGTGGCAGCAGTGAGAATTTCATTTCTAAGAAGCTACTGCCCTTAAACTGAACACAGAACCTCATTCCAATCCTTACAAAATAGGATGGATCGTGAAAGGTGGAGATACACAGATAAATGAGATTTGCTCGGTTCCTTTGTCAATTTGAGGAAGTTATAAAGACCAAATCGTCTGATGTGTTAGATATGGATGCTTGCCATATCTTGCTTGGGAGGTCGTGGCAGTATGATGTTCAAGCAGTCCATAGAGGAAGGGAGAATACATATGAATTCCAGTGGATGAATAATAAGATTGTCCTAATGCCTCTTAGCAAAAAAACGATGGAGTTAATTCGAAGAAGGTATTTTCAAATTGGAGACCTAGTAATCGCCTATCTGAAGAAGAAGAGGTTCCTAGCGGCGCCAGAGAAGAGGGAAGCATGCCAAAATAGCATTAATTGCGTCGGAGAATGAAGGGTCACAATTAATGGCCTTTGTTAAACCGGCTAAAGACAAATGTTCGAATAAGTCTGTGGGCCCCACAAATTTTGATTCCTTTTCCAAAAGTCAGCCGAAGGGTTGGATAGAGAAAAAGAAAACAGAATGGCACCTTCGATTACTGTGGTTCTGAAAATGCTGCTGCCAGCCCACCCTTTTCACTGTAGATTTTAAACGGCCTCTCTATCAAAGAATTTTAGTTAGCCGGTGATGCCCAATCCTCAACAAAGGTTGTTACCCCAATCAAGCTTGAACGAAAAAAGGCAGTTCTCCGAAAATCCCCCCTAAAGCATTTCATCAGAAAAAAAACATCTTTTGATAATGCTTGGACTGCTGTGCTAAAGTCTGAATCACTTGTTGCTTGCTCTTTCAAAGCTACAAAAGTGGCTCCACAGCAGAACTTAATTATCAAGCCCTCTCTATCTGAGGATAACTCGGATCTCCTGGAGGCCTGCAGCTCCAAAGTTCGAATTGATACAGTTCAAAACAGGTCAGTTACAGCTCCCCCAGCTCCTAAACTTTTCAATTACTCGAGTTTCACGGATCCTAACACTAAAATCACCTTATTACGAGGTTCTCCATGCCACTCAGTTGATTTTGTTCTGAAGAAGAAGAATACAGAATTATTCTCTCCCTATAGTGGTAGCAGAAAAGAATCTGCAGGCTTGAAATACACTTATGAGGGTCAAACAAATGCTGAAGTAGAAGGAGTGGATTTGAACTATTTAAAGTTAATGATGCTGATATTGGTGAAGCTCCTTGGTCCTCCCCTATTAAATTATCAGAAGTTCCAAAGGAGTTGTTGCCCATTATAA atgtggaagctcacagaattctatcagtctttgaaaaccatctccaatggattttgacagcaatatcagatttacttagagaccggttcaaggttatcaagaactccctccaagaatccaagattactatcaagaacttcaagaatggagctctattgatgatgaaactcaagaaaggggctagaacgaatctgatggagaatgaacatctcattggttggtttgttggaggattgaggtttgatataaaagaaaatgttaaacttcaacctttcctaaccctttctgatgctatcacttatgcaaaacctgtagaggagattattgaactaggttcaagaaagaataccagaagaagcccctggaatatcaatactaccagcaagactacagctacaaactcttctcttacttacaattccaagaaacaaacagagaacgtgtatcaagggcctaatatgagtaaatgctttcgttatggacaaactggctatctttccaactcttgccctaaaagaaagaccgtagccattctagaggaagatgaagacctcgttgaggaacaagaaggaaattttgatcaagatgaagagatccttgagccggataaaggggaaagactcttgtctactgcccttaaactgaacacagaacctcattccaatccttacaaaataggatggatcgtgaaaggtggagatacacagataaatgagatttgctcgaccaaatcgtctgatgtgttagatatggatgcttgccatatcttgcttgggaggtcgtggcagtatgatgttcaagcagtccatagaggaagggagaatacatatgaattccagtggatgaataataagattgtcctaatgcctcttagcaaaaaaacgatggagttaattcgaagaagGTATTTTCAAATTGGAGACCTATTAGCCGGTGATGCCCAATCCTCAACAAAGGTTGTTACCCCAATCAAGCTTGAACGaaaaaaggcagttctccgaaaatcccccctaaagcatttcatcagaaaaaaaacatcttttgataatgcttggactgctgtgctaaagtctgaatcacttgttgcttgctctttcaaagctacaaaagtggctccacagcagaacttaattatcaagccctctctatctgaggataactcggatctcctggaggcctgcagctccaaagttcgaattgatacagttcaaaacaggtcagttacagctcccccagctcctaaacttttcaattactcgagtttcacggatcctaacactaaaatcaccttattacgaggttctccatgccactcagttgattttgttctgaagaagaagaatacagaattattctctccctatagtggtagcagaaaagaatctgcaggcttgaaatacacttatgagggtcaaacaaatgctgaagtagaaggagtggatttgaactatttaaagttaatgatgctgatattggtgaagctccttggtcctcccctattaaattatcagaagttccaaaggagttgttgcccattataa ATGTGGAAGCTCACAGAATTCTATCAGTCTTTGAAAACCATCTCCAATGGATTTTGACAGCAATATCAGATTTACTTAGAGACCGGTTCAAGGTTATCAAGAACTCCCTCCAAGAATCCAAGATTACTATCAAGAACTTCAAGAATGGAGCTCTATTGATGATGAAACTCAAGAAAGGGGCTAGAACGAATCTGATGGAGAATGAACATCTCATTGGTTGGTTTGTTGGAGGATTGAGGTTTGATATAAAAGAAAATGTTAAACTTCAACCTTTCCTAACCCTTTCTGATGCTATCACTTATGCAAAACCTGTAGAGGAGATTATTGAACTAGGTTCAAGAAAGAATACCAGAAGAAGCCCCTGGAATATCAATACTACCAGCAAGACTACAGCTACAAACTCTTCTCTTACTTACAATTCCAAGAAACAAACAGAGAACGTGTATCAAGGGCCTAATATGAGTAAATGCTTTCGTTATGGACAAACTGGCTATCTTTCCAACTCTTGCCCTAAAAGAAAGACCGTAGCCATTCTAGAGGAAGATGAAGACCTCGTTGAGGAACAAGAAGGAAATTTTGATCAAGATGAAGAGATCCTTGAGCCGGATAAAGGGGAAAGACTCTTGTCTACTGCCCTTAAACTGAACACAGAACCTCATTCCAATCCTTACAAAATAGGATGGATCGTGAAAGGTGGAGATACACAGATAAATGAGATTTGCTCGACCAAATCGTCTGATGTGTTAGATATGGATGCTTGCCATATCTTGCTTGGGAGGTCGTGGCAGTATGATGTTCAAGCAGTCCATAGAGGAAGGGAGAATACATATGAATTCCAGTGGATGAATAATAAGATTGTCCTAATGCCTCTTAGCAAAAAAACGATGGAGTTAATTCGAAGAAGGTATTTTCAAATTGGAGACCTATTAGCCGGTGATGCCCAATCCTCAACAAAGGTTGTTACCCCAATCAAGCTTGAACGAAAAAAGGCAGTTCTCCGAAAATCCCCCCTAAAGCATTTCATCAGAAAAAAAACATCTTTTGATAATGCTTGGACTGCTGTGCTAAAGTCTGAATCACTTGTTGCTTGCTCTTTCAAAGCTACAAAAGTGGCTCCACAGCAGAACTTAATTATCAAGCCCTCTCTATCTGAGGATAACTCGGATCTCCTGGAGGCCTGCAGCTCCAAAGTTCGAATTGATACAGTTCAAAACAGGTCAGTTACAGCTCCCCCAGCTCCTAAACTTTTCAATTACTCGAGTTTCACGGATCCTAACACTAAAATCACCTTATTACGAGGTTCTCCATGCCACTCAGTTGATTTTGTTCTGAAGAAGAAGAATACAGAATTATTCTCTCCCTATAGTGGTAGCAGAAAAGAATCTGCAGGCTTGAAATACACTTATGAGGGTCAAACAAATGCTGAAGTAGAAGGAGTGGATTTGAACTATTTAAAGTTAATGATGCTGATATTGGTGAAGCTCCTTGGTCCTCCCCTATTAAATTATCAGAAGTTCCAAAGGAGTTGTTGCCCATTATAA VEAHRILSVFENHLQWILTAISDLLRDRFKVIKNSLQESKITIKNFKNGALLMMKLKKGARTNLMENEHLIGWFVGGLRFDIKENVKLQPFLTLSDAITYAKPVEEIIELGSRKNTRRSPWNINTTSKTTATNSSLTYNSKKQTENVYQGPNMSKCFRYGQTGYLSNSCPKRKTVAILEEDEDLVEEQEGNFDQDEEILEPDKGERLLSTALKLNTEPHSNPYKIGWIVKGGDTQINEICSTKSSDVLDMDACHILLGRSWQYDVQAVHRGRENTYEFQWMNNKIVLMPLSKKTMELIRRRYFQIGDLLAGDAQSSTKVVTPIKLERKKAVLRKSPLKHFIRKKTSFDNAWTAVLKSESLVACSFKATKVAPQQNLIIKPSLSEDNSDLLEACSSKVRIDTVQNRSVTAPPAPKLFNYSSFTDPNTKITLLRGSPCHSVDFVLKKKNTELFSPYSGSRKESAGLKYTYEGQTNAEVEGVDLNYLKLMMLILVKLLGPPLLNYQKFQRSCCPL*
BLAST of Cucsa.073360.1 vs. TrEMBL
Match: E7BQD7_PEA (Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 6.0e-21 Identity = 95/353 (26.91%), Postives = 159/353 (45.04%), Query Frame = 1
BLAST of Cucsa.073360.1 vs. TrEMBL
Match: A0A151QWG4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_044415 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 5.1e-20 Identity = 109/444 (24.55%), Postives = 188/444 (42.34%), Query Frame = 1
BLAST of Cucsa.073360.1 vs. TrEMBL
Match: A0A151UGH2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_048300 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 9.5e-19 Identity = 81/317 (25.55%), Postives = 136/317 (42.90%), Query Frame = 1
BLAST of Cucsa.073360.1 vs. TrEMBL
Match: A0A151QZY3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_043005 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.7e-18 Identity = 76/277 (27.44%), Postives = 120/277 (43.32%), Query Frame = 1
BLAST of Cucsa.073360.1 vs. TrEMBL
Match: E7BQD5_SILLA (Gag-pol polyprotein OS=Silene latifolia PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 6.2e-18 Identity = 74/297 (24.92%), Postives = 126/297 (42.42%), Query Frame = 1
BLAST of Cucsa.073360.1 vs. NCBI nr
Match: gi|778697731|ref|XP_011654385.1| (PREDICTED: uncharacterized protein LOC105435376 [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 1.9e-36 Identity = 92/184 (50.00%), Postives = 106/184 (57.61%), Query Frame = 1
BLAST of Cucsa.073360.1 vs. NCBI nr
Match: gi|659094543|ref|XP_008448119.1| (PREDICTED: uncharacterized protein LOC103490407 [Cucumis melo]) HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33 Identity = 82/231 (35.50%), Postives = 130/231 (56.28%), Query Frame = 1
BLAST of Cucsa.073360.1 vs. NCBI nr
Match: gi|1009172963|ref|XP_015867559.1| (PREDICTED: uncharacterized protein LOC107405062 [Ziziphus jujuba]) HSP 1 Score: 146.0 bits (367), Expect = 1.8e-31 Identity = 133/488 (27.25%), Postives = 193/488 (39.55%), Query Frame = 1
BLAST of Cucsa.073360.1 vs. NCBI nr
Match: gi|1009139320|ref|XP_015887064.1| (PREDICTED: uncharacterized protein LOC107422168 [Ziziphus jujuba]) HSP 1 Score: 125.6 bits (314), Expect = 2.6e-25 Identity = 92/285 (32.28%), Postives = 125/285 (43.86%), Query Frame = 1
BLAST of Cucsa.073360.1 vs. NCBI nr
Match: gi|778664952|ref|XP_011648447.1| (PREDICTED: uncharacterized protein LOC105434464 [Cucumis sativus]) HSP 1 Score: 123.6 bits (309), Expect = 9.8e-25 Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
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