Cucsa.073220.3 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.073220.3
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ubiquitin-conjugating enzyme family protein
Location	scaffold00765 : 812821 .. 815412 (+)
Sequence length	1149

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCAAGTATGTGAATGACTTTGTTGAAATCACATCTATTGTCTATGTGAATGGATCCTTCCCGACTTGATTTTTACTTGAATTTACTTTtCCCTTTTTTtGTATACTTTACCAGACCTATACCTGAGCTTTGCTTGAAACTCAACGTTTCTGTTTTTACACTGAAACTAGATTCACTCGAGCATAAGTTGGTCTCAGACTCTCAATGCATTTTCAGTGTATGCATGCATAATACTTTAGTAGGAAAGTCTTTGGTTATTAATCTCTACTTCTGGGTTACGCTTTCCACTTTTCTTAAACTTTGTGCTGTTCTTTAAAATGTTCCCGTCTATATTCCTTCTTTCTATCATGTATATTAATCTGTGGACTTTGTTCATCAACTTAAGTACTTCTTTGAAGTTTTCTATAGCATTGAAACTTGACAAAGCTATTCTTAGAAAAAAAAaGGTTGACAAAGCCATTAATTTTCTACAGACAGACTGGGAGGGTGGTTTCTTCCCCCTTACACTCAATTTCAGTGAAGACTACCCAAGTAAGCCACCAAAGTGTAGATTTCCTCAGGGCTTCTTCCATCCTAACGTGTACCCATCAGGAACTGTCTGTCTATCGATTCTCAATGAAGATAGTGTAAGTAGTAAATGAAATCTTATGTCTGTATGTTCATTGAAACATCACCTGTCCTATCCTTGAATTTCCTTTGTTCATGTGTAGGGGTGGAGACCAGCCATAACAGTTAAACAAATTCTTGTTGGAATCCAGGATTTGCTGGATCAACCAAACCCTGCTGATCCTGCTCAGACAGAGGGGTATCATCTCTTCATCCAGGTATGTCATATTTTGTTTTTAGATAGGGCAGCGGAAAGCTCAATCCTTGGCCATGAGGGTAGGCTAAGTGTATTCCGTAGTGATATATCTATGCTTGCAGATGTAAAACTAGTGATTTCAAAGATTTTGGGAGTGGTAATGGCGACATTTGGTTCTCAATTTTGTGTGAAGGCATGAGAATCAGAAATCCATGCATATAGCATGTTCAGCTATTGGCATCTGACCTGCTTACTAATGTGTGGGAGTTTTAAGAGACATATTTGTTGGTCAAGGGTGGGGTGTAGTAAATTGAGAAGGCGTAGAAGAAATCAATTAATTATATGATTATCTGTTGTGTCTTTACCCTCTTTACCCTGATTGGTTTAGGGCTTGTTGGCAACTTATTAGTTTTCTATTTTTtGTTTTTGAAAAATAATTTTTAAAAAaCAGATGTGTTTGGTAACTAATTCACCTTTTTGTTTTTCTTTAACCAAGAAACTTGCTTTTAAAATTATGAAGGAAAATTGAAAATGAATAAAAGATACTTAAAAAAAaTACATTTTGTTTTCCCAAAACAGAAAACAAAATCAGTTATTGAACGTATATGTTTTTTTTtAATAAAACAATTTTAAAAACATAAAATACAAAAACAAAAAGTTGAAATGGTTACCAAATGGGCCTTAGTCATCTTTCTTATTCTGTTCCACTATAATTGATGATTCTCCTCGAGTATTACAACCATTGCTGTCTACTTTTGCACACTAATTTTTTTtGTTTATTTCTAAAAATTAATTTTTCAGATGATCTTATCTACATGGTCCTGTGATTTTGAATTTTGTGCAAATTATTTTCGAGGGGGAACATTTTATGTATTTTTTATATTAATTGTTTCTAGATTAGATACAACAAAAGAGGCATACAATATGCATTTCTAGACTGCATGTGATCCTTGAAAGAGAAACTTTGAGAATAGTTGGTTTTCAAAATGGAAAAACTGAAGGGGTCTTGACGGATGGCCGTCCAATTTCCAACTTTCATATGTCCTCATGAGTCATGTGAGTTTCAGTGTCATGTCCCTGGGAAAGGGTGTATGATTCTGGTTCTTACCTATAAACCACTTGATTTGGAGGGATTACTTGAACCATACTCTGTTTGAAGAGATTTCTGACTGCTAGACTGTGTGGTTGGTAGCGGTTATTTTTGTTGAGGCACAGAGGTGTATACTTGAACAAGATGTGTTCTATAGGTTGTATGACCACGCCTTTGAGCTAACTGGCTGAAGAGTGTAATAACACAAGTTTTGTGAATGTGATGGAATTGGATACCTGTCTGACTTCTCTGATTTTCTATTGTTAAATGGAAGAATTTATTCTTGTGCAGGATGCCGTTGAGTACAAGAAGAGGGTTCGCCAACAAGCCAAGCAGTATCCACCTTTGGTGTAAGCTGATTGTGGTTGCCATTAAACTTCTTGAGTACTATGATGATATTAGCAGCCAGTTGCCACTGATTGAATCAACATTTTAAAACTGACTCGTTTTATAGATCGTTGGTATGTGGTGCACATTTCAACTGTCATGATAATCTCTGAAACTTTAGTGTTTCCCAGATATGGAACCAACTTATGTCAATATTTATATTGGTAGACATGTCAACAGCCTGGTGCTGCATTGTGTTCATATTGTGAACTTGTGGTTTCTTGCTCTAAAAAGTGTATGAAAGAAAAGGTTTTTTtCTTAACGTATGGATCAACTGCTACTTGCTTTTATAAAGAATGCCTTTTTTATGTA

mRNA sequence

TATCAAGTATGTGAATGACTTTGTTGAAATCACATCTATTGTCTATGTGAATGGATCCTTCCCGACTTGATTTTTACTTGAATTTACTTTTCCCTTTTTTTGTATACTTTACCAGACCTATACCTGAGCTTTGCTTGAAACTCAACGTTTCTGTTTTTACACTGAAACTAGATTCACTCGAGCATAAGTTGGTCTCAGACTCTCAATGCATTTTCAGTGTATGCATGCATAATACTTTAGTAGGAAAGTCTTTGGTTATTAATCTCTACTTCTGGGTTACGCTTTCCACTTTTCTTAAACTTTGTGCTGTTCTTTAAAATGTTCCCGTCTATATTCCTTCTTTCTATCATGTATATTAATCTGTGGACTTTGTTCATCAACTTAAGTACTTCTTTGAAGTTTTCTATAGCATTGAAACTTGACAAAGCTATTCTTAGAAAAAAAAAGGTTGACAAAGCCATTAATTTTCTACAGACAGACTGGGAGGGTGGTTTCTTCCCCCTTACACTCAATTTCAGTGAAGACTACCCAAGTAAGCCACCAAAGTGTAGATTTCCTCAGGGCTTCTTCCATCCTAACGTGTACCCATCAGGAACTGTCTGTCTATCGATTCTCAATGAAGATAGTGGGTGGAGACCAGCCATAACAGTTAAACAAATTCTTGTTGGAATCCAGGATTTGCTGGATCAACCAAACCCTGCTGATCCTGCTCAGACAGAGGGGTATCATCTCTTCATCCAGGATGCCGTTGAGTACAAGAAGAGGGTTCGCCAACAAGCCAAGCAGTATCCACCTTTGGTGTAAGCTGATTGTGGTTGCCATTAAACTTCTTGAGTACTATGATGATATTAGCAGCCAGTTGCCACTGATTGAATCAACATTTTAAAACTGACTCGTTTTATAGATCGTTGGTATGTGGTGCACATTTCAACTGTCATGATAATCTCTGAAACTTTAGTGTTTCCCAGATATGGAACCAACTTATGTCAATATTTATATTGGTAGACATGTCAACAGCCTGGTGCTGCATTGTGTTCATATTGTGAACTTGTGGTTTCTTGCTCTAAAAAGTGTATGAAAGAAAAGGTTTTTTTCTTAACGTATGGATCAACTGCTACTTGCTTTTATAAAGAATGCCTTTTTTATGTA

Coding sequence (CDS)

ATGTTCCCGTCTATATTCCTTCTTTCTATCATGTATATTAATCTGTGGACTTTGTTCATCAACTTAAGTACTTCTTTGAAGTTTTCTATAGCATTGAAACTTGACAAAGCTATTCTTAGAAAAAAAAaGGTTGACAAAGCCATTAATTTTCTACAGACAGACTGGGAGGGTGGTTTCTTCCCCCTTACACTCAATTTCAGTGAAGACTACCCAAGTAAGCCACCAAAGTGTAGATTTCCTCAGGGCTTCTTCCATCCTAACGTGTACCCATCAGGAACTGTCTGTCTATCGATTCTCAATGAAGATAGTGGGTGGAGACCAGCCATAACAGTTAAACAAATTCTTGTTGGAATCCAGGATTTGCTGGATCAACCAAACCCTGCTGATCCTGCTCAGACAGAGGGGTATCATCTCTTCATCCAGGATGCCGTTGAGTACAAGAAGAGGGTTCGCCAACAAGCCAAGCAGTATCCACCTTTGGTGTAA

Protein sequence

MFPSIFLLSIMYINLWTLFINLSTSLKFSIALKLDKAILRKKKVDKAINFLQTDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV*

Homology

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BLAST of Cucsa.073220.3 vs. Swiss-Prot
Match: SCE1_ARATH (SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana GN=SCE1 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.3e-55
Identity = 97/109 (88.99%), Postives = 103/109 (94.50%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           TDWEGGFFPLT++FSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNED GWRPAITVK
Sbjct: 52  TDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVK 111

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           QILVGIQDLLD PNPADPAQT+GYHLF QD VEYKKRV+ Q+KQYP LV
Sbjct: 112 QILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRVKLQSKQYPALV 160

[Close]

BLAST of Cucsa.073220.3 vs. Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-40
Identity = 70/108 (64.81%), Postives = 89/108 (82.41%), Query Frame = 1


Query: 52  QTDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITV 111
           +T+WEGG +PL + F+EDYPSKPPKCRFP+ FFHPNVYPSGTVCLSILNE++ W+P++T+
Sbjct: 50  KTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTI 109

Query: 112 KQILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPP 160
           K +L+GIQDLLD PNP  PAQ    HLF+ +  EY K+V+ Q+K YPP
Sbjct: 110 KTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVYPP 157

[Close]

BLAST of Cucsa.073220.3 vs. Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hus5 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.9e-40
Identity = 73/108 (67.59%), Postives = 88/108 (81.48%), Query Frame = 1


Query: 52  QTDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITV 111
           +T WEGG + LT+ F E+YP++PPKCRF    FHPNVYPSGTVCLSILNE+ GW+PAIT+
Sbjct: 50  KTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITI 109

Query: 112 KQILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPP 160
           KQIL+GIQDLLD PN A PAQTE Y +F +D VEY+KRVR QA++  P
Sbjct: 110 KQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 157

[Close]

BLAST of Cucsa.073220.3 vs. Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-38
Identity = 71/107 (66.36%), Postives = 83/107 (77.57%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           T WEGG F L + F +DYPS PPKC+F    FHPNVYPSGTVCLSIL ED  WRPAIT+K
Sbjct: 51  TPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIK 110

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPP 160
           QIL+GIQ+LL++PN  DPAQ E Y +F QD  EY+KRVR QAK++ P
Sbjct: 111 QILLGIQELLNEPNIQDPAQAEAYTIFCQDRTEYEKRVRAQAKKFSP 157

[Close]

BLAST of Cucsa.073220.3 vs. Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 70/107 (65.42%), Postives = 84/107 (78.50%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           T WEGG F L + F +DYPS PPKC+F    FHPNVYPSGTVCLSIL ED  WRPAIT+K
Sbjct: 51  TPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIK 110

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPP 160
           QIL+GIQ+LL++PN  DPAQ E Y ++ Q+ VEY+KRVR QAK++ P
Sbjct: 111 QILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFSP 157

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BLAST of Cucsa.073220.3 vs. TrEMBL
Match: A0A0A0LNC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G428410 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.0e-59
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK
Sbjct: 52  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 111

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV
Sbjct: 112 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 160

[Close]

BLAST of Cucsa.073220.3 vs. TrEMBL
Match: Q8L5P9_POPCA (Putative ubiquitin-conjugating enzyme OS=Populus canadensis GN=ubc PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.1e-57
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 1


Query: 51  LQTDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT 110
           L TDWEGG+FPLTLNFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT
Sbjct: 50  LGTDWEGGYFPLTLNFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT 109

Query: 111 VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDA EYKKRVRQQAKQYP LV
Sbjct: 110 VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKKRVRQQAKQYPSLV 160

[Close]

BLAST of Cucsa.073220.3 vs. TrEMBL
Match: A9PAA6_POPTR (Ubiquitin-conjugating enzyme family protein OS=Populus trichocarpa GN=POPTR_0005s18460g PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.1e-57
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 1


Query: 51  LQTDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT 110
           L TDWEGG+FPLTLNFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT
Sbjct: 50  LGTDWEGGYFPLTLNFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT 109

Query: 111 VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDA EYKKRVRQQAKQYP LV
Sbjct: 110 VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKKRVRQQAKQYPSLV 160

[Close]

BLAST of Cucsa.073220.3 vs. TrEMBL
Match: A0A151SCB0_CAJCA (Sumo-conjugating enzyme ubc9 OS=Cajanus cajan GN=KK1_025756 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.8e-57
Identity = 104/109 (95.41%), Postives = 108/109 (99.08%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           TDWEGGFFPLT++FSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK
Sbjct: 51  TDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 110

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           QILVGIQDLLDQPNPADPAQTEGYHLFIQDA EYK+RVRQQAKQYPPLV
Sbjct: 111 QILVGIQDLLDQPNPADPAQTEGYHLFIQDATEYKRRVRQQAKQYPPLV 159

[Close]

BLAST of Cucsa.073220.3 vs. TrEMBL
Match: D7SVT3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00160 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.6e-57
Identity = 104/109 (95.41%), Postives = 108/109 (99.08%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           TDWEGG+FPLTL+FSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK
Sbjct: 52  TDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 111

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           QILVGIQDLLDQPNPADPAQTEGYHLFIQDA EYK+RVRQQAKQYPPLV
Sbjct: 112 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPPLV 160

[Close]

BLAST of Cucsa.073220.3 vs. TAIR10
Match: AT3G57870.1 (AT3G57870.1 sumo conjugation enzyme 1)

HSP 1 Score: 214.5 bits (545), Expect = 4.7e-56
Identity = 97/109 (88.99%), Postives = 103/109 (94.50%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           TDWEGGFFPLT++FSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNED GWRPAITVK
Sbjct: 52  TDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVK 111

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           QILVGIQDLLD PNPADPAQT+GYHLF QD VEYKKRV+ Q+KQYP LV
Sbjct: 112 QILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRVKLQSKQYPALV 160

[Close]

BLAST of Cucsa.073220.3 vs. TAIR10
Match: AT2G02760.1 (AT2G02760.1 ubiquiting-conjugating enzyme 2)

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-23
Identity = 50/104 (48.08%), Postives = 62/104 (59.62%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           T W+GG F L+L FSEDYP+KPP  RF    FHPN+Y  G++CL IL     W P   V 
Sbjct: 46  TPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--WSPIYDVA 105

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQ 157
            IL  IQ LL  PNP  PA +E   +F +   EY +RVR+  +Q
Sbjct: 106 AILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQ 147

[Close]

BLAST of Cucsa.073220.3 vs. TAIR10
Match: AT1G14400.1 (AT1G14400.1 ubiquitin carrier protein 1)

HSP 1 Score: 104.4 bits (259), Expect = 6.8e-23
Identity = 49/104 (47.12%), Postives = 61/104 (58.65%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           T W+GG F L+L FSEDYP+KPP  RF    FHPN+Y  G++CL IL     W P   V 
Sbjct: 46  TPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--WSPIYDVA 105

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQ 157
            IL  IQ LL  PNP  PA +E   ++ +   EY +RVR   +Q
Sbjct: 106 AILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQ 147

[Close]

BLAST of Cucsa.073220.3 vs. TAIR10
Match: AT5G62540.1 (AT5G62540.1 ubiquitin-conjugating enzyme 3)

HSP 1 Score: 102.1 bits (253), Expect = 3.4e-22
Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           T W+GG F LTL+F+EDYP+KPP  RF    FHPN+Y  G++CL IL     W P   V 
Sbjct: 46  TPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQ--WSPIYDVA 105

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQ 157
            +L  IQ LL  PNP  PA  E   LF ++  EY ++V +  +Q
Sbjct: 106 AVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQ 147

[Close]

BLAST of Cucsa.073220.3 vs. TAIR10
Match: AT1G64230.4 (AT1G64230.4 ubiquitin-conjugating enzyme 28)

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-19
Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 1


Query: 55  WEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQI 114
           + GG F +T++F  DYP KPPK  F    FHPNV  +G++CL IL E   W PA+T+ ++
Sbjct: 87  YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQ--WSPALTISKV 146

Query: 115 LVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQY 158
           L+ I  LL  PNP DP   E  H++  D  +Y+   R   ++Y
Sbjct: 147 LLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKY 187

[Close]

BLAST of Cucsa.073220.3 vs. NCBI nr
Match: gi|449468301|ref|XP_004151860.1| (PREDICTED: SUMO-conjugating enzyme SCE1 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 4.3e-59
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK
Sbjct: 52  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 111

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV
Sbjct: 112 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 160

[Close]

BLAST of Cucsa.073220.3 vs. NCBI nr
Match: gi|743925446|ref|XP_011006861.1| (PREDICTED: SUMO-conjugating enzyme SCE1 isoform X2 [Populus euphratica])

HSP 1 Score: 230.7 bits (587), Expect = 1.8e-57
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 1


Query: 51  LQTDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT 110
           L TDWEGG+FPLTLNFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT
Sbjct: 21  LSTDWEGGYFPLTLNFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT 80

Query: 111 VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDA EYKKRVRQQAKQYP LV
Sbjct: 81  VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKKRVRQQAKQYPSLV 131

[Close]

BLAST of Cucsa.073220.3 vs. NCBI nr
Match: gi|1009145341|ref|XP_015890282.1| (PREDICTED: SUMO-conjugating enzyme SCE1 [Ziziphus jujuba])

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 105/109 (96.33%), Postives = 108/109 (99.08%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           TDWEGG+FPLTL+FSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK
Sbjct: 52  TDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 111

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           QILVGIQDLLDQPNPADPAQTEGYHLFIQDA EYKKRVRQQAKQYPPLV
Sbjct: 112 QILVGIQDLLDQPNPADPAQTEGYHLFIQDATEYKKRVRQQAKQYPPLV 160

[Close]

BLAST of Cucsa.073220.3 vs. NCBI nr
Match: gi|224084382|ref|XP_002307279.1| (ubiquitin-conjugating enzyme family protein [Populus trichocarpa])

HSP 1 Score: 229.9 bits (585), Expect = 3.1e-57
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 1


Query: 51  LQTDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT 110
           L TDWEGG+FPLTLNFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT
Sbjct: 50  LGTDWEGGYFPLTLNFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAIT 109

Query: 111 VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDA EYKKRVRQQAKQYP LV
Sbjct: 110 VKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKKRVRQQAKQYPSLV 160

[Close]

BLAST of Cucsa.073220.3 vs. NCBI nr
Match: gi|1012341244|gb|KYP52450.1| (Sumo-conjugating enzyme ubc9 [Cajanus cajan])

HSP 1 Score: 229.6 bits (584), Expect = 4.0e-57
Identity = 104/109 (95.41%), Postives = 108/109 (99.08%), Query Frame = 1


Query: 53  TDWEGGFFPLTLNFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 112
           TDWEGGFFPLT++FSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK
Sbjct: 51  TDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVK 110

Query: 113 QILVGIQDLLDQPNPADPAQTEGYHLFIQDAVEYKKRVRQQAKQYPPLV 162
           QILVGIQDLLDQPNPADPAQTEGYHLFIQDA EYK+RVRQQAKQYPPLV
Sbjct: 111 QILVGIQDLLDQPNPADPAQTEGYHLFIQDATEYKRRVRQQAKQYPPLV 159

The following BLAST results are available for this feature:

BLAST of Cucsa.073220.3 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SCE1_ARATH	8.3e-55	88.99	SUMO-conjugating enzyme SCE1 OS=Arabidopsis thaliana GN=SCE1 PE=1 SV=1	[more]
UBC9_DICDI	2.0e-40	64.81	Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1	[more]
UBC9_SCHPO	9.9e-40	67.59	SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
UBC9_PAGMA	4.2e-38	66.36	SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1	[more]
UBC9A_DANRE	1.2e-37	65.42	SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1	[more]

BLAST of Cucsa.073220.3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNC3_CUCSA	3.0e-59	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G428410 PE=3 SV=1	[more]
Q8L5P9_POPCA	2.1e-57	95.50	Putative ubiquitin-conjugating enzyme OS=Populus canadensis GN=ubc PE=2 SV=1	[more]
A9PAA6_POPTR	2.1e-57	95.50	Ubiquitin-conjugating enzyme family protein OS=Populus trichocarpa GN=POPTR_0005...	[more]
A0A151SCB0_CAJCA	2.8e-57	95.41	Sumo-conjugating enzyme ubc9 OS=Cajanus cajan GN=KK1_025756 PE=3 SV=1	[more]
D7SVT3_VITVI	3.6e-57	95.41	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00160 PE=3 SV=...	[more]

BLAST of Cucsa.073220.3 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57870.1	4.7e-56	88.99	sumo conjugation enzyme 1	[more]
AT2G02760.1	1.8e-23	48.08	ubiquiting-conjugating enzyme 2	[more]
AT1G14400.1	6.8e-23	47.12	ubiquitin carrier protein 1	[more]
AT5G62540.1	3.4e-22	46.15	ubiquitin-conjugating enzyme 3	[more]
AT1G64230.4	2.1e-19	41.75	ubiquitin-conjugating enzyme 28	[more]

BLAST of Cucsa.073220.3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468301\|ref\|XP_004151860.1\|	4.3e-59	100.00	PREDICTED: SUMO-conjugating enzyme SCE1 [Cucumis sativus]	[more]
gi\|743925446\|ref\|XP_011006861.1\|	1.8e-57	95.50	PREDICTED: SUMO-conjugating enzyme SCE1 isoform X2 [Populus euphratica]	[more]
gi\|1009145341\|ref\|XP_015890282.1\|	2.3e-57	96.33	PREDICTED: SUMO-conjugating enzyme SCE1 [Ziziphus jujuba]	[more]
gi\|224084382\|ref\|XP_002307279.1\|	3.1e-57	95.50	ubiquitin-conjugating enzyme family protein [Populus trichocarpa]	[more]
gi\|1012341244\|gb\|KYP52450.1\|	4.0e-57	95.41	Sumo-conjugating enzyme ubc9 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD
IPR023313	UBQ-conjugating_AS

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0016925	protein sumoylation
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0019789	SUMO transferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.073220	Cucsa.073220	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.073220.3	Cucsa.073220.3-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.073220.3.five_prime_UTR.1	Cucsa.073220.3.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.073220.3.CDS.1	Cucsa.073220.3.CDS.1	CDS
Cucsa.073220.3.CDS.2	Cucsa.073220.3.CDS.2	CDS
Cucsa.073220.3.CDS.3	Cucsa.073220.3.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.073220.3.three_prime_UTR.1	Cucsa.073220.3.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 52..152 score: 1.4
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 53..148 score: 29
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 53..157 score: 1.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 52..157 score: 2.54
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 84..99 scor
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 53..157 score: 1.7
None	No IPR available	PANTHER	PTHR24067:SF112	SUBFAMILY NOT NAMED	coord: 53..157 score: 1.7
None	No IPR available	SMART	SM00212	ubc_7	coord: 13..159 score: 2.2