Cucsa.065600.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTTTTTGAACTTCAATCCTTCTCTTTAATGGTTATCTTCCCAAATTCTTTGATACCCTTTTCTTTTTAGAACCAATCCTTTCTAAAGCTTAAATCTTTCGCGTAAACCCCTTTGTTTTTCTTCTTACTCGAAATTCCTCTGTTTTTCCTTCAAAAATGGCGCCTTCAGGAGCAAGAATGGCTACAAGAACTACAAGAAGAGCTTTACCCAACTTGAAGCTAACGAAGAAAATCAAGAAAACGACGAACAAGAAACAACCGCCGCAGAAGATAGAGATTCCAGTTCCCGTCACGCAAAACGACATCGTTGAATTTGGCGACGAGTGTTCCGACGGTGGTTGCAGTACTCCAAAAGCAGAGAGACATAGAATCCCAGAGATTTTGACGTGTCCACCGGCGCCGAAGAAACCAAGAGCTGTTTCCGATTGCTCACTACGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAACTCTTCTTCTTTGTTGCCTTGCCGGTGCCGGACATTTCAGTCTGA GGTTTTTGAACTTCAATCCTTCTCTTTAATGGTTATCTTCCCAAATTCTTTGATACCCTTTTCTTTTTAGAACCAATCCTTTCTAAAGCTTAAATCTTTCGCGTAAACCCCTTTGTTTTTCTTCTTACTCGAAATTCCTCTGTTTTTCCTTCAAAAATGGCGCCTTCAGGAGCAAGAATGGCTACAAGAACTACAAGAAGAGCTTTACCCAACTTGAAGCTAACGAAGAAAATCAAGAAAACGACGAACAAGAAACAACCGCCGCAGAAGATAGAGATTCCAGTTCCCGTCACGCAAAACGACATCGTTGAATTTGGCGACGAGTGTTCCGACGGTGGTTGCAGTACTCCAAAAGCAGAGAGACATAGAATCCCAGAGATTTTGACGTGTCCACCGGCGCCGAAGAAACCAAGAGCTGTTTCCGATTGCTCACTACGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAACTCTTCTTCTTTGTTGCCTTGCCGGTGCCGGACATTTCAGTCTGA ATGGCGCCTTCAGGAGCAAGAATGGCTACAAGAACTACAAGAAGAGCTTTACCCAACTTGAAGCTAACGAAGAAAATCAAGAAAACGACGAACAAGAAACAACCGCCGCAGAAGATAGAGATTCCAGTTCCCGTCACGCAAAACGACATCGTTGAATTTGGCGACGAGTGTTCCGACGGTGGTTGCAGTACTCCAAAAGCAGAGAGACATAGAATCCCAGAGATTTTGACGTGTCCACCGGCGCCGAAGAAACCAAGAGCTGTTTCCGATTGCTCACTACGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAACTCTTCTTCTTTGTTGCCTTGCCGGTGCCGGACATTTCAGTCTGA MAPSGARMATRTTRRALPNLKLTKKIKKTTNKKQPPQKIEIPVPVTQNDIVEFGDECSDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSLRRSPIAFFAPPELELFFFVALPVPDISV*
BLAST of Cucsa.065600.1 vs. TrEMBL
Match: A0A0A0L0Q1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G291940 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 2.0e-63 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. TrEMBL
Match: W9RHW5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015298 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.3e-19 Identity = 60/132 (45.45%), Postives = 78/132 (59.09%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. TrEMBL
Match: C6T822_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G335700 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.3e-19 Identity = 68/158 (43.04%), Postives = 86/158 (54.43%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. TrEMBL
Match: A0A0B2P2B0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_028474 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.3e-19 Identity = 68/158 (43.04%), Postives = 86/158 (54.43%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. TrEMBL
Match: A0A068VHS0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00005167001 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.1e-18 Identity = 58/116 (50.00%), Postives = 78/116 (67.24%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. TAIR10
Match: AT3G20898.1 (AT3G20898.1 unknown protein) HSP 1 Score: 87.8 bits (216), Expect = 5.0e-18 Identity = 53/109 (48.62%), Postives = 65/109 (59.63%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. TAIR10
Match: AT1G51355.1 (AT1G51355.1 unknown protein) HSP 1 Score: 83.6 bits (205), Expect = 9.4e-17 Identity = 48/123 (39.02%), Postives = 63/123 (51.22%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. TAIR10
Match: AT5G40460.1 (AT5G40460.1 unknown protein) HSP 1 Score: 48.5 bits (114), Expect = 3.4e-06 Identity = 33/97 (34.02%), Postives = 48/97 (49.48%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. TAIR10
Match: AT5G02220.1 (AT5G02220.1 unknown protein) HSP 1 Score: 47.8 bits (112), Expect = 5.7e-06 Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. NCBI nr
Match: gi|778693209|ref|XP_011653594.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis sativus]) HSP 1 Score: 249.6 bits (636), Expect = 2.8e-63 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. NCBI nr
Match: gi|659097599|ref|XP_008449712.1| (PREDICTED: uncharacterized protein LOC103491508 [Cucumis melo]) HSP 1 Score: 228.4 bits (581), Expect = 6.7e-57 Identity = 113/121 (93.39%), Postives = 115/121 (95.04%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. NCBI nr
Match: gi|703121530|ref|XP_010102349.1| (hypothetical protein L484_015298 [Morus notabilis]) HSP 1 Score: 103.2 bits (256), Expect = 3.3e-19 Identity = 60/132 (45.45%), Postives = 78/132 (59.09%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. NCBI nr
Match: gi|359806302|ref|NP_001240966.1| (uncharacterized protein LOC100785545 [Glycine max]) HSP 1 Score: 103.2 bits (256), Expect = 3.3e-19 Identity = 68/158 (43.04%), Postives = 86/158 (54.43%), Query Frame = 1
BLAST of Cucsa.065600.1 vs. NCBI nr
Match: gi|743838149|ref|XP_011025640.1| (PREDICTED: uncharacterized protein LOC105126469 [Populus euphratica]) HSP 1 Score: 102.1 bits (253), Expect = 7.2e-19 Identity = 62/126 (49.21%), Postives = 75/126 (59.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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