Cucsa.058420.2 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATAAAATTAAAAAAGAGAAAAGAAAAAAGAAAAAAGGAAAAAGGAAAAAAAAAAAGAAATTAAGAGACGCACAACAAAAGCCTCAACGAAGAAAAGAATGAAAGCTAAAGAGAAGAGGAGATTGTAAGGTAATTCGAATGGCGGAGGTGAAGCCCGGCGATTCCACCACCAACACCACTACCACCACCATCACCACCACCACCGCTACCACCGCTTTCAACGGTTCTCAAAACCATTCGAATTCCGATCACCCAACGGACCGTCCGGTTCGAGTCTACGCTGATGGGATCTACGATCTCTTCCATTTTGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCGTACGTTTCATCTTCCATTTTCTTTTCCTTCTCCTTAATTTTTCTTCTCTTCTTGTTCTGATTCATCTATTACTCATCCCTTATGCCCTGGTTTTTACGGTTTCTGAATCTCTTCGATTTTAACTAATTTACTTCTTCTTCTTTTTTTGTTTGTTTTTTTTTTTCTGATGCATTAGATTGCTTGATTGTTCGTATTTTCACCGTTTTTATTTACTTGCCTTTACAACTCTGTGATCTTCTTTTGTATTGATCTTTTAGTGTTTAGCCTGTTTCTTTGTATCATACTTAGGATGATTATTTTCTTAAAAAATTGACTGAGACGTGCTTATTGTTTTTTTTTCCCCTTGTAATTTCAGGTTCCCGAATACCTTTTTGCTAGTTGGATGTTGTAATGATGAGACTACCCACAAGTTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTATGAACTTCTGTTTTTACATGAAATTTTATTTTAGTTGGGGTTTTGGACCTTGAGTCTTTGCTAATTGTTGTACATAGATGTGCTTTTTGATACGTACAACCGCCAATTAGGAGGCATGTCTGAATCCTTTAAATACAATTGTAGCTATGATGGATTAAAATTGAACTCACGATTCATCAATATCTACATGATCTTTATATATTTTCTTATGAACGTGGAATCAATCGTAGTCTAATGAATTCTTGAACGTGGTTTTATTTAATTTGCTCCGTTTATTTCCCTAGGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCATGATTCTCTTCCGTAAGTGAACCAAAAGGGTTAAGTAACTATGGGCAATGGTGTTTATTCCTTCTTTTACCTTTTATCTGTGTTTCTATCCATCTAATTAATATATAGTGGATGGTAAAGTGTACGAGGAAGCGGCCGAGTTTGTTTGTTCGTGGTGTATCTATCTGTTCATATTGAATTTATTCGTATATTCTGATTTAAATGATCTATGTCATCTCGTAACTATATCTTCTATTTTTCTGGCTTTATATAGCTATGCTGATGCTTCTGGGGCTGGTAAAGATGTTTATGAATTTGTAAGTTCAGTAGATGGGCATATTCATTTTATCAGATTGGTGCTTGGGTATCTGCCATTGCATATGATTTCATAGATGGGAATTTTTCCTTTGTAGGTTAAAAAGATTGGAAAGTTTAAGGAAACAAAAAGGACGGAAGGAATTTCAACTTCAGACATTATCATGAGGATTGTGAAAGATTATAATCAGTATGTACTGCGCAATTTGGACCGTGGTTATTCGAGGAAAGAGCTTGGAGTCAGCTTTGTGAAGGCATGATATGCATCTAGAATGATCTATTTTACTAGGATGATACTTATCTTGCTAGTCAGCGAGGGTATGTTTTATTGTTTTTGTTTCTTAACAAGCAACCCAATCTTGTTGTATACAATTATCAGGAAAAACGGCTTAGAGTAAATATGAGATTGAAGAAATTGCAGGAGAAAGTTAAGGAGCATCAAGAAAAAGTGGGAGAAAAGGTACCCGTGTCTCTTTCTTTAATAATAAGTCTATTGGTACATTGTAGGGAAGTAGGGATTTTAATGTTGGCTTAATGATTTCTATGCAATAGCTGTACTTCTACCTTGGGTTTTGCATTAGAAAATATCTTTATGAGATAGCAGGCCTCTTGGATTCTTGAAGGAGTCTTTCTAGGTTTTGTTTAAAGGTGTCTTGTCTTATGTCTATTGCATCTCTGCTATGACTTGTTAATTAAACGTTAGTGTGATGAATGTTTTTTGAGATTTTCACAATGGAGAAAGCTGAATCTATTATATATTAGTTTGTCCTTCGCTGCTCATTATTGGATAAGCTTTGTATTTCTAGGTTTTGTTATAAGTATACCTAGTTGTGCTGTGTGCACTTCGGTACACTTTTGGCATCTTGCCTCCCACTTTGCAAGGCATCCTCACTCACATGATCTTAGTGAGTTTCTTATGGTTATTATGGTTATCATTATTATTCAGTTATCTTTTTTTTTCATTGCTCATAAACTCTAAGCTCTTTATTTCTAATAATAGTATGATTTTTTGCTCTCTTTCCTATATACCAACCTTCTGCTTTATTCTTAAAATAATACCATGGGCCTTCTTTTATATATCCTTTTGCTTTGTTGCTCACCTTGAGCCTATAAATACAAGGCATTTATTTATTTGGATAGGAAACAATGCATTTATTCATTGCTGCTATTTTTCTTTGTGGAAGATTTTCTCAGTGTGTCTTATCTCTTTAAGTCTTTATAGCTTTGGTTCCAGTATTCTCTGCCAGTTGCTTCATGTTGGTTTGTGTCGGTCATCTTTTAAAAACATCTAGCAGGTCTTGGAACTTTTAAATCATAAGCCTCTTAACTTAGAAGTGATTAATAAATCCATAACTTTAAGCTGTCTAAAAGGTACTTTACATTTTTTTTCCATTTCTTACATTCATGGGATATAAAATTGAATTTTTAGTCTAATAGGACCTTAAACTTTCAATTTTGTTTACTATGGATAATTTTATAATGTTGAATATGGTAATGACCTATTAGATATAAAATTGAAAGTCCAAGTATTTTTTAGACCATAAATTGAAAGTTCACGGGACATATTAAACATAAAATAAAAGGTTCAACCTTCAGGACCCTATCACATGCCATCTTGAAAGTTAAGAGACCAAACTTGAATTTAACCTTATTGTTATTATATATGTTGTAGTGGAGATATCTATCATCGAGAAGAATGTTATGGGAGAATTAGAGATTGATTTTTTTTTGGACCTATTAGACAAACTTAAACGTGCTTTACATTTTATTTTAGACTAAAATTACTTGAACGATGAGGACAGGTTCTTTTTACTTATTCCTAAAATTAGTGTTTTTCTGAAACTTGTTCTTAAAAGCTGTTGGTTCCAAATATTTTTGGTTTAAATTCATCTCTAGAGGAAACTATTTTGTATACATCAATTTAAAGCTTTATGTAGACTGTCTTTCTTGGCAAAGTAAAGGGGAGCAAGCTTCTTGTGTGGCTGCTGTTTCTTTTTCTTTTATCATATGGGCTTTTAGAAGAGGATTGTAGTTTGTAGTTGTACATTCATGGAGTTGAATTTTGTGCCAGCTTTCTGCCATGCGTATTTTGGCCCTAGTTTTAAAATTCAGGTTTAAGATATATGCTAATTTTAAGTTAGATGGAAATAAGTATAGTATTTCGTTTTGATAATCTTGCTTCTTTTGTGGTTCTTTTTTGAAGCATGTAAAACATGATTTGTTTTACAATTCATGATTCTGAAACTAATTGTTTCTAACTATCTAATGCTCTGAAAGAGCACAATTTGTCTTGTAGTTTTTACTAATTCAAGCAATAAAGCTCATATGGACCCCTGGCTTTTGATATCATGACTTTGGAAACTGGGTAGTTTGTATTTAGGTTGTCCAGTATAGCAAATTGATTATCTATTTATTTTTCTAAAATATATTATATTCTACATTTCATGCAGCATGTAATTCTTTCGCATTAAGAGATTTTTCAAGCGTTTCCTGGGGTGAAGTTTTTGCTGCATAATTTCCAATTGTCCTAGCAGTTCTTTTCGCTTTTGTTGGTAGCAGTATGAGCACTGCATCCAGGTTTAAACTTTGGCCAAATGATGCTGTAACCGAAAACTTGCAACATAGAGTGCCATTTTCCATGCATCATATTTCTAATCATCGTTATTCGCTTTGAGATCATGTTTATTGTGGTTAAATCCTAATTCTGCACATTGAAGTGGAAAAAGTCCTTTTTGATTTTAATGCTAACCAGGTCTCTATCTGGCTAGTCTTGTTGGGGACCTACAATTGTATTTTATGCTTTATTTACTTGGACCTAATTATAGGCAGGATTTTTTTTTTTTAAAAATCTTTTAAAGTTGAAAATGCTTGTCTTGGATATTGCAGATTCAAACAGTTGCAAAAACTGCCGGCATGCACCGGAATGAATGGGTAGAAAATGCTGATCGATGGGTAGCTGGGTTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGTGAGTTAATGCATGAATTACCCCATTCCCATTTATTCATTTACTTTTGGAGTCATTAAGGCACACAAACCCATCTGTTTTGGCAAATCTTGAACTAAAGTTTGACGAGTTGCATTTGAAAATCATGGGTCTGTTTAGGGCACGGCCATCAGAGATCGAATTCAAGAGCGATTGAAGGGGGCACAGCAGCTGAAATATATATCAAATGGCAAGGACAGTGATTCAGACCTTGATGAAGAATATTATTACGATGATGATAATGAAGAATATTATGATGACGACGACGATGACTTCTATGAAGAATTTGAGAAAGATGAAAAGAAAAGGTAGGGCATTTGTTTCAAGTCAAGTTTGAATACGTGTCACGTGCTTGTTGGTGAATTCTACACTATATTTTGCTACTATATGTTTAGATGATGCAGATGGTAAAAACCATAACTGCTAGTTTGTTACCAAAGCCAGAAAAAAAAAAAAGAAAGGGCACTTGGTGATAAGGTTAGGAACCATTTCTTTTGGTGACCCCTTTTTAAGATATATGTTTCTTTTTTTTGTGCATATGGATGAAAATTTTCCTTTCAAGCTTTGTAAAACAGGTCGATATGAAAGCCTTTTTTCCTTTTTCTTTTTCTTTTTGGTTTTCGTGAATCATTGTAATTGAAGATTGGACTTTTGGTTTTCTTGTTTGTAGGTAATGTAAGAGTGATAAATATGGTTTTGTT aaaaataaaattaaaaaagagaaaagaaaaaagaaaaaaggaaaaaggaaaaaaaaaaagaaaTTAAGAGACGCACAACAAAAGCCTCAACGAAGAAAAGAATGAAAGCTAAAGAGAAGAGGAGATTGTAAGGTAATTCGAATGGCGGAGGTGAAGCCCGGCGATTccaccaccaacaccactaccaccaccatcaccaccaccaccgctaccaccGCTTTCAACGGTTCTCAAAACCATTCGAATTCCGATCACCCAACGGACCGTCCGGTTCGAGTCTACGCTGATGGGATCTACGATCTCTTCCATTTTGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCGTACGTTCCCGAATACCTTTTTGCTAGTTGGATGTTGTAATGATGAGACTACCCACAAGTTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCATGATTCTCTTCCCTATGCTGATGCTTCTGGGGCTGGTAAAGATGTTTATGAATTTGTTAAAAAGATTGGAAAGTTTAAGGAAACAAAAAGGACGGAAGGAATTTCAACTTCAGACATTATCATGAGGATTGTGAAAGATTATAATCAGTATGTACTGCGCAATTTGGACCGTGGTTATTCGAGGAAAGAGCTTGGAGTCAGCTTTGTGAAGGAAAAACGGCTTAGAGTAAATATGAGATTGAAGAAATTGCAGGAGAAAGTTAAGGAGCATCAAGAAAAAGTGGGAGAAAAGATTCAAACAGTTGCAAAAACTGCCGGCATGCACCGGAATGAATGGGTAGAAAATGCTGATCGATGGGTAGCTGGGTTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGGCACGGCCATCAGAGATCGAATTCAAGAGCGATTGAAGGGGGCACAGCAGCTGAAATATATATCAAATGGCAAGGACAGTGATTCAGACCTtgatgaagaatattattacgatgatgataatgaagaatattatgatgacgacgacgatgaCTTCTATGAAGAATTTGAGAAAGATGAAAAGAAAAGGTAGGGCATTTGTTTCAAGTCAAGTTTGAATACGTGTCACGTGCTTGTTGGTGAATTCTACACTATATTTTGCTACTATATGTTTAGATGATGCAGATGGTAAAAACCATAACTGCTAGTTTGTTACCAAAGCCAGAAAAAAAAAAAAGAAAGGGCACTTGGTGATAAGGTTAGGAACCATTTCTTTTGGTGACCCCTTTTTAAGATATATGTTTCTTTTTTTTGTGCATATGGATGAAAATTTTCCTTTCAAGCTTTGTAAAACAGGTCGATATGAAAGCCTTTTTTCCTTTTTCTTTTTCTTTTTGGTTTTCGTGAATCATTGTAATTGAAGATTGGACTTTTGGTTTTCTTGTTTGTAGGTAATGTAAGAGTGATAAATATGGTTTTGTT ATGGGATCTACGATCTCTTCCATTTTGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCGTACGTTCCCGAATACCTTTTTGCTAGTTGGATGTTGTAATGATGAGACTACCCACAAGTTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCATGATTCTCTTCCCTATGCTGATGCTTCTGGGGCTGGTAAAGATGTTTATGAATTTGTTAAAAAGATTGGAAAGTTTAAGGAAACAAAAAGGACGGAAGGAATTTCAACTTCAGACATTATCATGAGGATTGTGAAAGATTATAATCAGTATGTACTGCGCAATTTGGACCGTGGTTATTCGAGGAAAGAGCTTGGAGTCAGCTTTGTGAAGGAAAAACGGCTTAGAGTAAATATGAGATTGAAGAAATTGCAGGAGAAAGTTAAGGAGCATCAAGAAAAAGTGGGAGAAAAGATTCAAACAGTTGCAAAAACTGCCGGCATGCACCGGAATGAATGGGTAGAAAATGCTGATCGATGGGTAGCTGGGTTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGGCACGGCCATCAGAGATCGAATTCAAGAGCGATTGAAGGGGGCACAGCAGCTGAAATATATATCAAATGGCAAGGACAGTGATTCAGACCTTGATGAAGAATATTATTACGATGATGATAATGAAGAATATTATGATGACGACGACGATGACTTCTATGAAGAATTTGAGAAAGATGAAAAGAAAAGGTAG MGSTISSILVTLALSSKPRNRTFPNTFLLVGCCNDETTHKFKGKTVMNEAERYESLRHCKWVDEVIPDAPWVISQEFIDKHKIDFVAHDSLPYADASGAGKDVYEFVKKIGKFKETKRTEGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSFVKEKRLRVNMRLKKLQEKVKEHQEKVGEKIQTVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKMGTAIRDRIQERLKGAQQLKYISNGKDSDSDLDEEYYYDDDNEEYYDDDDDDFYEEFEKDEKKR*
BLAST of Cucsa.058420.2 vs. Swiss-Prot
Match: CCT1_ARATH (Choline-phosphate cytidylyltransferase 1 OS=Arabidopsis thaliana GN=CCT1 PE=1 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 7.7e-112 Identity = 201/275 (73.09%), Postives = 232/275 (84.36%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. Swiss-Prot
Match: CCT2_ARATH (Choline-phosphate cytidylyltransferase 2 OS=Arabidopsis thaliana GN=CCT2 PE=1 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 1.1e-107 Identity = 194/253 (76.68%), Postives = 218/253 (86.17%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. Swiss-Prot
Match: PCY1B_HUMAN (Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B PE=1 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.9e-57 Identity = 107/193 (55.44%), Postives = 142/193 (73.58%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. Swiss-Prot
Match: PCY1B_RAT (Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus GN=Pcyt1b PE=1 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 4.1e-57 Identity = 106/193 (54.92%), Postives = 142/193 (73.58%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. Swiss-Prot
Match: PCY1B_MOUSE (Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b PE=1 SV=2) HSP 1 Score: 223.0 bits (567), Expect = 4.1e-57 Identity = 106/193 (54.92%), Postives = 142/193 (73.58%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. TrEMBL
Match: A0A0A0L316_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618470 PE=4 SV=1) HSP 1 Score: 585.5 bits (1508), Expect = 3.5e-164 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. TrEMBL
Match: A0A022RRY9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010070mg PE=4 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 1.4e-128 Identity = 228/280 (81.43%), Postives = 248/280 (88.57%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. TrEMBL
Match: A0A061DTD1_THECC (Choline-phosphate cytidylyltransferase B OS=Theobroma cacao GN=TCM_002035 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 1.1e-125 Identity = 228/280 (81.43%), Postives = 247/280 (88.21%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. TrEMBL
Match: F6HTN6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0017g01980 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 4.7e-124 Identity = 221/277 (79.78%), Postives = 248/277 (89.53%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. TrEMBL
Match: A5AJE8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019065 PE=4 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 3.0e-123 Identity = 220/277 (79.42%), Postives = 247/277 (89.17%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. TAIR10
Match: AT2G32260.1 (AT2G32260.1 phosphorylcholine cytidylyltransferase) HSP 1 Score: 404.8 bits (1039), Expect = 4.3e-113 Identity = 201/275 (73.09%), Postives = 232/275 (84.36%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. TAIR10
Match: AT4G15130.1 (AT4G15130.1 phosphorylcholine cytidylyltransferase2) HSP 1 Score: 391.0 bits (1003), Expect = 6.5e-109 Identity = 194/253 (76.68%), Postives = 218/253 (86.17%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. TAIR10
Match: AT2G38670.1 (AT2G38670.1 phosphorylethanolamine cytidylyltransferase 1) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15 Identity = 48/133 (36.09%), Postives = 75/133 (56.39%), Query Frame = 1
HSP 2 Score: 68.6 bits (166), Expect = 7.3e-12 Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. NCBI nr
Match: gi|700199824|gb|KGN54982.1| (hypothetical protein Csa_4G618470 [Cucumis sativus]) HSP 1 Score: 585.5 bits (1508), Expect = 5.1e-164 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. NCBI nr
Match: gi|449456522|ref|XP_004145998.1| (PREDICTED: choline-phosphate cytidylyltransferase 2 [Cucumis sativus]) HSP 1 Score: 548.5 bits (1412), Expect = 6.9e-153 Identity = 265/273 (97.07%), Postives = 268/273 (98.17%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. NCBI nr
Match: gi|659129358|ref|XP_008464646.1| (PREDICTED: choline-phosphate cytidylyltransferase 2-like [Cucumis melo]) HSP 1 Score: 538.1 bits (1385), Expect = 9.3e-150 Identity = 262/274 (95.62%), Postives = 266/274 (97.08%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. NCBI nr
Match: gi|604344012|gb|EYU42829.1| (hypothetical protein MIMGU_mgv1a010070mg [Erythranthe guttata]) HSP 1 Score: 467.2 bits (1201), Expect = 2.0e-128 Identity = 228/280 (81.43%), Postives = 248/280 (88.57%), Query Frame = 1
BLAST of Cucsa.058420.2 vs. NCBI nr
Match: gi|590711225|ref|XP_007049046.1| (Choline-phosphate cytidylyltransferase B [Theobroma cacao]) HSP 1 Score: 457.6 bits (1176), Expect = 1.6e-125 Identity = 228/280 (81.43%), Postives = 247/280 (88.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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