Cucsa.058420.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATAAAATTAAAAAAGAGAAAAGAAAAAAGAAAAAAGGAAAAAGGAAAAAAAAAAAGAAATTAAGAGACGCACAACAAAAGCCTCAACGAAGAAAAGAATGAAAGCTAAAGAGAAGAGGAGATTGTAAGGTAATTCGAATGGCGGAGGTGAAGCCCGGCGATTCCACCACCAACACCACTACCACCACCATCACCACCACCACCGCTACCACCGCTTTCAACGGTTCTCAAAACCATTCGAATTCCGATCACCCAACGGACCGTCCGGTTCGAGTCTACGCTGATGGGATCTACGATCTCTTCCATTTTGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCGTACGTTTCATCTTCCATTTTCTTTTCCTTCTCCTTAATTTTTCTTCTCTTCTTGTTCTGATTCATCTATTACTCATCCCTTATGCCCTGGTTTTTACGGTTTCTGAATCTCTTCGATTTTAACTAATTTACTTCTTCTTCTTTTTTTGTTTGTTTTTTTTTTTCTGATGCATTAGATTGCTTGATTGTTCGTATTTTCACCGTTTTTATTTACTTGCCTTTACAACTCTGTGATCTTCTTTTGTATTGATCTTTTAGTGTTTAGCCTGTTTCTTTGTATCATACTTAGGATGATTATTTTCTTAAAAAATTGACTGAGACGTGCTTATTGTTTTTTTTTCCCCTTGTAATTTCAGGTTCCCGAATACCTTTTTGCTAGTTGGATGTTGTAATGATGAGACTACCCACAAGTTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTATGAACTTCTGTTTTTACATGAAATTTTATTTTAGTTGGGGTTTTGGACCTTGAGTCTTTGCTAATTGTTGTACATAGATGTGCTTTTTGATACGTACAACCGCCAATTAGGAGGCATGTCTGAATCCTTTAAATACAATTGTAGCTATGATGGATTAAAATTGAACTCACGATTCATCAATATCTACATGATCTTTATATATTTTCTTATGAACGTGGAATCAATCGTAGTCTAATGAATTCTTGAACGTGGTTTTATTTAATTTGCTCCGTTTATTTCCCTAGGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCATGATTCTCTTCCGTAAGTGAACCAAAAGGGTTAAGTAACTATGGGCAATGGTGTTTATTCCTTCTTTTACCTTTTATCTGTGTTTCTATCCATCTAATTAATATATAGTGGATGGTAAAGTGTACGAGGAAGCGGCCGAGTTTGTTTGTTCGTGGTGTATCTATCTGTTCATATTGAATTTATTCGTATATTCTGATTTAAATGATCTATGTCATCTCGTAACTATATCTTCTATTTTTCTGGCTTTATATAGCTATGCTGATGCTTCTGGGGCTGGTAAAGATGTTTATGAATTTGTAAGTTCAGTAGATGGGCATATTCATTTTATCAGATTGGTGCTTGGGTATCTGCCATTGCATATGATTTCATAGATGGGAATTTTTCCTTTGTAGGTTAAAAAGATTGGAAAGTTTAAGGAAACAAAAAGGACGGAAGGAATTTCAACTTCAGACATTATCATGAGGATTGTGAAAGATTATAATCAGTATGTACTGCGCAATTTGGACCGTGGTTATTCGAGGAAAGAGCTTGGAGTCAGCTTTGTGAAGGCATGATATGCATCTAGAATGATCTATTTTACTAGGATGATACTTATCTTGCTAGTCAGCGAGGGTATGTTTTATTGTTTTTGTTTCTTAACAAGCAACCCAATCTTGTTGTATACAATTATCAGGAAAAACGGCTTAGAGTAAATATGAGATTGAAGAAATTGCAGGAGAAAGTTAAGGAGCATCAAGAAAAAGTGGGAGAAAAGGTACCCGTGTCTCTTTCTTTAATAATAAGTCTATTGGTACATTGTAGGGAAGTAGGGATTTTAATGTTGGCTTAATGATTTCTATGCAATAGCTGTACTTCTACCTTGGGTTTTGCATTAGAAAATATCTTTATGAGATAGCAGGCCTCTTGGATTCTTGAAGGAGTCTTTCTAGGTTTTGTTTAAAGGTGTCTTGTCTTATGTCTATTGCATCTCTGCTATGACTTGTTAATTAAACGTTAGTGTGATGAATGTTTTTTGAGATTTTCACAATGGAGAAAGCTGAATCTATTATATATTAGTTTGTCCTTCGCTGCTCATTATTGGATAAGCTTTGTATTTCTAGGTTTTGTTATAAGTATACCTAGTTGTGCTGTGTGCACTTCGGTACACTTTTGGCATCTTGCCTCCCACTTTGCAAGGCATCCTCACTCACATGATCTTAGTGAGTTTCTTATGGTTATTATGGTTATCATTATTATTCAGTTATCTTTTTTTTTCATTGCTCATAAACTCTAAGCTCTTTATTTCTAATAATAGTATGATTTTTTGCTCTCTTTCCTATATACCAACCTTCTGCTTTATTCTTAAAATAATACCATGGGCCTTCTTTTATATATCCTTTTGCTTTGTTGCTCACCTTGAGCCTATAAATACAAGGCATTTATTTATTTGGATAGGAAACAATGCATTTATTCATTGCTGCTATTTTTCTTTGTGGAAGATTTTCTCAGTGTGTCTTATCTCTTTAAGTCTTTATAGCTTTGGTTCCAGTATTCTCTGCCAGTTGCTTCATGTTGGTTTGTGTCGGTCATCTTTTAAAAACATCTAGCAGGTCTTGGAACTTTTAAATCATAAGCCTCTTAACTTAGAAGTGATTAATAAATCCATAACTTTAAGCTGTCTAAAAGGTACTTTACATTTTTTTTCCATTTCTTACATTCATGGGATATAAAATTGAATTTTTAGTCTAATAGGACCTTAAACTTTCAATTTTGTTTACTATGGATAATTTTATAATGTTGAATATGGTAATGACCTATTAGATATAAAATTGAAAGTCCAAGTATTTTTTAGACCATAAATTGAAAGTTCACGGGACATATTAAACATAAAATAAAAGGTTCAACCTTCAGGACCCTATCACATGCCATCTTGAAAGTTAAGAGACCAAACTTGAATTTAACCTTATTGTTATTATATATGTTGTAGTGGAGATATCTATCATCGAGAAGAATGTTATGGGAGAATTAGAGATTGATTTTTTTTTGGACCTATTAGACAAACTTAAACGTGCTTTACATTTTATTTTAGACTAAAATTACTTGAACGATGAGGACAGGTTCTTTTTACTTATTCCTAAAATTAGTGTTTTTCTGAAACTTGTTCTTAAAAGCTGTTGGTTCCAAATATTTTTGGTTTAAATTCATCTCTAGAGGAAACTATTTTGTATACATCAATTTAAAGCTTTATGTAGACTGTCTTTCTTGGCAAAGTAAAGGGGAGCAAGCTTCTTGTGTGGCTGCTGTTTCTTTTTCTTTTATCATATGGGCTTTTAGAAGAGGATTGTAGTTTGTAGTTGTACATTCATGGAGTTGAATTTTGTGCCAGCTTTCTGCCATGCGTATTTTGGCCCTAGTTTTAAAATTCAGGTTTAAGATATATGCTAATTTTAAGTTAGATGGAAATAAGTATAGTATTTCGTTTTGATAATCTTGCTTCTTTTGTGGTTCTTTTTTGAAGCATGTAAAACATGATTTGTTTTACAATTCATGATTCTGAAACTAATTGTTTCTAACTATCTAATGCTCTGAAAGAGCACAATTTGTCTTGTAGTTTTTACTAATTCAAGCAATAAAGCTCATATGGACCCCTGGCTTTTGATATCATGACTTTGGAAACTGGGTAGTTTGTATTTAGGTTGTCCAGTATAGCAAATTGATTATCTATTTATTTTTCTAAAATATATTATATTCTACATTTCATGCAGCATGTAATTCTTTCGCATTAAGAGATTTTTCAAGCGTTTCCTGGGGTGAAGTTTTTGCTGCATAATTTCCAATTGTCCTAGCAGTTCTTTTCGCTTTTGTTGGTAGCAGTATGAGCACTGCATCCAGGTTTAAACTTTGGCCAAATGATGCTGTAACCGAAAACTTGCAACATAGAGTGCCATTTTCCATGCATCATATTTCTAATCATCGTTATTCGCTTTGAGATCATGTTTATTGTGGTTAAATCCTAATTCTGCACATTGAAGTGGAAAAAGTCCTTTTTGATTTTAATGCTAACCAGGTCTCTATCTGGCTAGTCTTGTTGGGGACCTACAATTGTATTTTATGCTTTATTTACTTGGACCTAATTATAGGCAGGATTTTTTTTTTTTAAAAATCTTTTAAAGTTGAAAATGCTTGTCTTGGATATTGCAGATTCAAACAGTTGCAAAAACTGCCGGCATGCACCGGAATGAATGGGTAGAAAATGCTGATCGATGGGTAGCTGGGTTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGTGAGTTAATGCATGAATTACCCCATTCCCATTTATTCATTTACTTTTGGAGTCATTAAGGCACACAAACCCATCTGTTTTGGCAAATCTTGAACTAAAGTTTGACGAGTTGCATTTGAAAATCATGGGTCTGTTTAGGGCACGGCCATCAGAGATCGAATTCAAGAGCGATTGAAGGGGGCACAGCAGCTGAAATATATATCAAATGGCAAGGACAGTGATTCAGACCTTGATGAAGAATATTATTACGATGATGATAATGAAGAATATTATGATGACGACGACGATGACTTCTATGAAGAATTTGAGAAAGATGAAAAGAAAAGGTAGGGCATTTGTTTCAAGTCAAGTTTGAATACGTGTCACGTGCTTGTTGGTGAATTCTACACTATATTTTGCTACTATATGTTTAGATGATGCAGATGGTAAAAACCATAACTGCTAGTTTGTTACCAAAGCCAGAAAAAAAAAAAAGAAAGGGCACTTGGTGATAAGGTTAGGAACCATTTCTTTTGGTGACCCCTTTTTAAGATATATGTTTCTTTTTTTTGTGCATATGGATGAAAATTTTCCTTTCAAGCTTTGTAAAACAGGTCGATATGAAAGCCTTTTTTCCTTTTTCTTTTTCTTTTTGGTTTTCGTGAATCATTGTAATTGAAGATTGGACTTTTGGTTTTCTTGTTTGTAGGTAATGTAAGAGTGATAAATATGGTTTTGTT aaaaataaaattaaaaaagagaaaagaaaaaagaaaaaaggaaaaaggaaaaaaaaaaagaaaTTAAGAGACGCACAACAAAAGCCTCAACGAAGAAAAGAATGAAAGCTAAAGAGAAGAGGAGATTGTAAGGTAATTCGAATGGCGGAGGTGAAGCCCGGCGATTccaccaccaacaccactaccaccaccatcaccaccaccaccgctaccaccGCTTTCAACGGTTCTCAAAACCATTCGAATTCCGATCACCCAACGGACCGTCCGGTTCGAGTCTACGCTGATGGGATCTACGATCTCTTCCATTTTGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCGTTCCCGAATACCTTTTTGCTAGTTGGATGTTGTAATGATGAGACTACCCACAAGTTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCATGATTCTCTTCCCTATGCTGATGCTTCTGGGGCTGGTAAAGATGTTTATGAATTTGTTAAAAAGATTGGAAAGTTTAAGGAAACAAAAAGGACGGAAGGAATTTCAACTTCAGACATTATCATGAGGATTGTGAAAGATTATAATCAGTATGTACTGCGCAATTTGGACCGTGGTTATTCGAGGAAAGAGCTTGGAGTCAGCTTTGTGAAGGAAAAACGGCTTAGAGTAAATATGAGATTGAAGAAATTGCAGGAGAAAGTTAAGGAGCATCAAGAAAAAGTGGGAGAAAAGATTCAAACAGTTGCAAAAACTGCCGGCATGCACCGGAATGAATGGGTAGAAAATGCTGATCGATGGGTAGCTGGGTTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGGCACGGCCATCAGAGATCGAATTCAAGAGCGATTGAAGGGGGCACAGCAGCTGAAATATATATCAAATGGCAAGGACAGTGATTCAGACCTtgatgaagaatattattacgatgatgataatgaagaatattatgatgacgacgacgatgaCTTCTATGAAGAATTTGAGAAAGATGAAAAGAAAAGGTAGGGCATTTGTTTCAAGTCAAGTTTGAATACGTGTCACGTGCTTGTTGGTGAATTCTACACTATATTTTGCTACTATATGTTTAGATGATGCAGATGGTAAAAACCATAACTGCTAGTTTGTTACCAAAGCCAGAAAAAAAAAAAAGAAAGGGCACTTGGTGATAAGGTTAGGAACCATTTCTTTTGGTGACCCCTTTTTAAGATATATGTTTCTTTTTTTTGTGCATATGGATGAAAATTTTCCTTTCAAGCTTTGTAAAACAGGTCGATATGAAAGCCTTTTTTCCTTTTTCTTTTTCTTTTTGGTTTTCGTGAATCATTGTAATTGAAGATTGGACTTTTGGTTTTCTTGTTTGTAGGTAATGTAAGAGTGATAAATATGGTTTTGTT ATGGCGGAGGTGAAGCCCGGCGATTCCACCACCAACACCACTACCACCACCATCACCACCACCACCGCTACCACCGCTTTCAACGGTTCTCAAAACCATTCGAATTCCGATCACCCAACGGACCGTCCGGTTCGAGTCTACGCTGATGGGATCTACGATCTCTTCCATTTTGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCGTTCCCGAATACCTTTTTGCTAGTTGGATGTTGTAATGATGAGACTACCCACAAGTTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCATGATTCTCTTCCCTATGCTGATGCTTCTGGGGCTGGTAAAGATGTTTATGAATTTGTTAAAAAGATTGGAAAGTTTAAGGAAACAAAAAGGACGGAAGGAATTTCAACTTCAGACATTATCATGAGGATTGTGAAAGATTATAATCAGTATGTACTGCGCAATTTGGACCGTGGTTATTCGAGGAAAGAGCTTGGAGTCAGCTTTGTGAAGGAAAAACGGCTTAGAGTAAATATGAGATTGAAGAAATTGCAGGAGAAAGTTAAGGAGCATCAAGAAAAAGTGGGAGAAAAGATTCAAACAGTTGCAAAAACTGCCGGCATGCACCGGAATGAATGGGTAGAAAATGCTGATCGATGGGTAGCTGGGTTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGGCACGGCCATCAGAGATCGAATTCAAGAGCGATTGAAGGGGGCACAGCAGCTGAAATATATATCAAATGGCAAGGACAGTGATTCAGACCTTGATGAAGAATATTATTACGATGATGATAATGAAGAATATTATGATGACGACGACGATGACTTCTATGAAGAATTTGAGAAAGATGAAAAGAAAAGGTAG MAEVKPGDSTTNTTTTTITTTTATTAFNGSQNHSNSDHPTDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTFLLVGCCNDETTHKFKGKTVMNEAERYESLRHCKWVDEVIPDAPWVISQEFIDKHKIDFVAHDSLPYADASGAGKDVYEFVKKIGKFKETKRTEGISTSDIIMRIVKDYNQYVLRNLDRGYSRKELGVSFVKEKRLRVNMRLKKLQEKVKEHQEKVGEKIQTVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKMGTAIRDRIQERLKGAQQLKYISNGKDSDSDLDEEYYYDDDNEEYYDDDDDDFYEEFEKDEKKR*
BLAST of Cucsa.058420.1 vs. Swiss-Prot
Match: CCT1_ARATH (Choline-phosphate cytidylyltransferase 1 OS=Arabidopsis thaliana GN=CCT1 PE=1 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 1.9e-130 Identity = 234/328 (71.34%), Postives = 269/328 (82.01%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. Swiss-Prot
Match: CCT2_ARATH (Choline-phosphate cytidylyltransferase 2 OS=Arabidopsis thaliana GN=CCT2 PE=1 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 9.2e-125 Identity = 224/294 (76.19%), Postives = 250/294 (85.03%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. Swiss-Prot
Match: PCY1B_HUMAN (Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B PE=1 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 4.1e-72 Identity = 131/224 (58.48%), Postives = 168/224 (75.00%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. Swiss-Prot
Match: PCY1B_RAT (Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus GN=Pcyt1b PE=1 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 9.0e-72 Identity = 130/224 (58.04%), Postives = 168/224 (75.00%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. Swiss-Prot
Match: PCY1B_MOUSE (Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b PE=1 SV=2) HSP 1 Score: 271.9 bits (694), Expect = 9.0e-72 Identity = 130/224 (58.04%), Postives = 168/224 (75.00%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. TrEMBL
Match: A0A0A0L316_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618470 PE=4 SV=1) HSP 1 Score: 548.5 bits (1412), Expect = 5.6e-153 Identity = 265/273 (97.07%), Postives = 268/273 (98.17%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. TrEMBL
Match: A0A061DTD1_THECC (Choline-phosphate cytidylyltransferase B OS=Theobroma cacao GN=TCM_002035 PE=4 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 1.8e-143 Identity = 256/312 (82.05%), Postives = 278/312 (89.10%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. TrEMBL
Match: M5X5Q2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008428mg PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 2.6e-142 Identity = 260/329 (79.03%), Postives = 287/329 (87.23%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. TrEMBL
Match: F6HTN6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0017g01980 PE=4 SV=1) HSP 1 Score: 510.0 bits (1312), Expect = 2.2e-141 Identity = 252/315 (80.00%), Postives = 280/315 (88.89%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. TrEMBL
Match: A0A067LFC7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00478 PE=4 SV=1) HSP 1 Score: 508.8 bits (1309), Expect = 4.9e-141 Identity = 249/309 (80.58%), Postives = 273/309 (88.35%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. TAIR10
Match: AT2G32260.1 (AT2G32260.1 phosphorylcholine cytidylyltransferase) HSP 1 Score: 466.8 bits (1200), Expect = 1.1e-131 Identity = 234/328 (71.34%), Postives = 269/328 (82.01%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. TAIR10
Match: AT4G15130.1 (AT4G15130.1 phosphorylcholine cytidylyltransferase2) HSP 1 Score: 448.0 bits (1151), Expect = 5.2e-126 Identity = 224/294 (76.19%), Postives = 250/294 (85.03%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. TAIR10
Match: AT2G38670.1 (AT2G38670.1 phosphorylethanolamine cytidylyltransferase 1) HSP 1 Score: 108.6 bits (270), Expect = 7.5e-24 Identity = 62/166 (37.35%), Postives = 95/166 (57.23%), Query Frame = 1
HSP 2 Score: 89.7 bits (221), Expect = 3.6e-18 Identity = 60/168 (35.71%), Postives = 86/168 (51.19%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. NCBI nr
Match: gi|449456522|ref|XP_004145998.1| (PREDICTED: choline-phosphate cytidylyltransferase 2 [Cucumis sativus]) HSP 1 Score: 686.4 bits (1770), Expect = 2.5e-194 Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. NCBI nr
Match: gi|659129358|ref|XP_008464646.1| (PREDICTED: choline-phosphate cytidylyltransferase 2-like [Cucumis melo]) HSP 1 Score: 653.3 bits (1684), Expect = 2.3e-184 Identity = 321/333 (96.40%), Postives = 322/333 (96.70%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. NCBI nr
Match: gi|700199824|gb|KGN54982.1| (hypothetical protein Csa_4G618470 [Cucumis sativus]) HSP 1 Score: 548.5 bits (1412), Expect = 8.0e-153 Identity = 265/273 (97.07%), Postives = 268/273 (98.17%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. NCBI nr
Match: gi|645247045|ref|XP_008229646.1| (PREDICTED: choline-phosphate cytidylyltransferase 2 [Prunus mume]) HSP 1 Score: 516.9 bits (1330), Expect = 2.6e-143 Identity = 261/329 (79.33%), Postives = 285/329 (86.63%), Query Frame = 1
BLAST of Cucsa.058420.1 vs. NCBI nr
Match: gi|590711225|ref|XP_007049046.1| (Choline-phosphate cytidylyltransferase B [Theobroma cacao]) HSP 1 Score: 516.9 bits (1330), Expect = 2.6e-143 Identity = 256/312 (82.05%), Postives = 278/312 (89.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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