Cucsa.058190.2 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCATCGTGTAGAAGCACTCTGTTTTGTTATGGGCAAAACCAAAATCAGTAGCGGTGAGCGGGACACAAATGGTGCGACGACGGACCAGACAAAGCTTGCGAAATCGGTATCTGACAAATCTTCCATTTCATATCCATTGATGACGATGATTCCACCTCCTCCTCTATCCCATTTCTCTTAAACTATTCACTAAATTACTATTATCCTTCCCCCACCTTTCAATCTTGTTTTAGTCAATAACAAGGCGCGATGATGCATACCTGTCGGTTCTTACGAATTCCATCGTTTCATCCCAATGCTCTATGCTTCTTCTCTCAAACTCCTCATCTTCTTTCTCTCAAACCCGTTTCCTCAATTCCCCTTAGGAATTTCAGTTCTCAAATGGGGTCATCGCCATCTTCTTCCTTCTCTAAGCTCTTGTTTCGTCAGTTGTTCGAGAAGGATTCTTCCACTTATACTTATCTTCTCGCTGATGTTTCTCATCCTGATAAACCAGCGCTTGTAATTTCCTTTATCTAATCTCTCTTTTCTATGTTAGTGTTTGGCTGTTTAAATTGAAATTTGATGAAATGTGTAATGGCTTTGTTTCGTTTCGTTTCGTTTCGTTTCATCAATGTTTTGGGCATGTTTTCTGAGTTTGGTTGGAAAGTTTGGTCAAAAGCATTAATGGGTTTTTCGATTCTCCTGTTTTTTTTCTTTTTCTTCTTTCAGTTGATTGACCCGGTTGACAAGACTGTAGATAGGGATCTAAATCTTGTAAGGGAATTGGGCCTGAAGCTTGTATATGCTATGAATACTCATGTTCATGCTGATCATGTCACTGGGACTGGACTCATCAAGGTTTTTCTTCTCCATCATCATTTTTGTTGGTGATTGCTCAATCCCAGTTATTGTTTTCTCAGTGTCTGACTTTATTGTTATTTTTGTTTTTTATGCGTTTACTTCCTTCAGAGTAAATTTCCAGGAGCTAAATCTGTTATCTCGAGAGCAAGTGGCTCCAAAGCTGATGTGTTGATTGAACCTGGCGATAGAATTTCTATTGGTGATCTATTCCTGGAGGTATGCCAATACTTTTATTTAATACTACAAAACAAAGACACAGTACAGATCTCTGTTTGTTTTCATAGTTAGGATTCCAGCATTTTATCAAGACTATCCATCATCTTTGCCATCACATAGGAGTCTAGGACTGGTGACAGTTCATCAGCATAATATATCTGCTCGGTATTTGTATTGATCTCTAAACTTCCCTTAGCTTAGTGACGATCTCTCATGTTGAAAACCTAATCGAATTCTTGACATAGTGTAGCTTGGTTAGTTGATGTTGGCTATGACATTTTACATGCCACCAGACCTCGTCCGGCCACCACACAGTGCAGAGAAATCGCAAGGACTTTCCTGCCATCTAATTTCAGACTTTATAGATTACTACTTCATATGATAATGACCATGAGTTCTGAAAGAGTAAACACCGATCCATTTCTTCTTGAGTGTTTCAATACTACAAAAAACCTGCTGTGACCATTTACAGAAAGGTTATGCACTTTTGTTCCAGAAATGCTCCTTTGACTTATTACCCTCCTGTAATATTACATACTGCAGCTAGCTCCTCTGTCTCCTATTTTCTTTTGAGATGTGGCTCCGCATCATTACTTCTTTTGTTGTTTGTTCATTATTCCTCTAATTCTATCAATAATAAATAACATTACCTTTCACTGAAAGTAAAGATGTACTGCAAAGATATTTTCTCTGGTTCCTTGTTGATGATAACAAATCAGAAATTGGAATACTTCATAAATGTAGTAGGTGATTTCACATGGAGGAGTGAGGAATGAAATAGTTTAGGGTTTTAGAGACTTGATGTGTCACTGTCACCCCTGATTTTCCTCTCTAACACAGAGGTGGAGGAACATATAAATAGCATAGGGAATCTTAGTAAGGAAGTTTCGATTAGATTTTCCATCACCATCAGTTTAGGGAAGTTTCCAAATGACTGCTCAGTAAAGATTTAGTTTGCCATTGGAGGGTAATATGCAATGAGCATTTTTACCTCCTTAGATATCACAAGCTTTGAATGAAAAACTGATATGCCATGTTAGTTTTTCAGAAGTATAAGTGGTTTCATAGACTCTGATGTCAATAGTAAAGTTCCTGAACCCAGACTGAGCAAAATTTTCTTTTCAAAAAAGAATATACGCTCACAAAGGATTTATCATTAAGTAAAGCGATGTTAAGAAAAAAGATAAACTTTGGGGACAATCCTAGAGTTGACTCTTGTCTCCACTTTATATTGCATATAATTTCAGGTTCGTGCAACTCCGGGACATACATCAGGATGTGTCACCTATGTAACAGGGGATGAACCTGATCAGCCTTATCCTAGGATGGCATTCACTGGGGATACTCTGTTGATACGTGGATGTGGGAGGACAGATTTTCAGGTTACTTTCACTCTTTGACTTATTATTTAATTGTTGATGATAGTCCTCGAGTAGTTCTCGAAAATATTGGTATTTTGGATTAAGATATTTCAGTATAATACTTTGACTGTCATATTTCCTCTAGCTTGGGACTCTCTGTACATTTAACTGTTTTTCCAAACTTCTCTCATATCTACTTCACGGTAGAGTTTTCTGTTTTATTATAAAACATCAATTGATAAAGAGAGCTGGTATCATTTTTATTGCACAACAACCGCGAAAAACTTTGTTTTGACTTATGGGGTTACTGGAACCATTATGAACTATTAACTAATCATTTAGGTGTAAACGTTTGCCTAATGAATCACAACCATTCTGCATGATTATGGGCTATTCTTGAGCTTTATTGCCACTAGGCTGAATGCCAGCGTCTTTTGCAGGGTGGAAGTTCGAAGCAGCTCTATGAATCTGTCCATTCACAGGTAAGAACATGAACTCAGTATATTTGCCACGAAAAATTGGAACAAGTAACTGGGGGATAAGAAGAACTAATGATCAGTATATATGGCGTTTCTTTGTTTTAGCTTTTTGTAACACCAACACGTTCTGATTTATTAACTCTGTGCCAGATTTTCACTCTGCCAAAGGATACACTGATCTATCCAGCTCATGATTACAAGGGATTTAGTGTAAGAAAATTTCTATGCCTGTTCTTTCTTCGAAAACTTGGTTCATTCTCTCATATCTGACTTCCAATTTCAGGTTAGTACTGTAGGTGAAGAAATGGCATACAATCCTCGGCTTACCAAGGATCTGGTAATTTCTTTAGTAACTAAAACCACTTATCTGGAAATTGCATTTCAAAGCAGAATTATAGTTACTAAATTTTTTGCTTTCACATCTAAAGTTTGTAATTTTTATTTTACCTGGGTTTTTTTTGTTTTGCAGGAAGAATTCAAGAAGATCATGGAAAGTAAGTACATAAAAACAAAAATATAATATGGTGTAAACGGATTGTCTCTTCTATAACAACTATATTGTTTCTCTGTCTCAGATTTGAACTTGGCTTATCCAAAGATGATGGACATAGCAGTTCCAGCAAATTTGGTGTGTGGATTGCAAGATCCAGCTTGTTAGCTCTCTTAGTCATCCATGTGATTCATTGTGTATAATTGGCCTATCTTACTATAAAATCGAAATGAGATAAAAATAAAGATCAATCGGAGCTATAGGCTGAGAGGTGCGACTTGTGAGTTCCACAAACAAAAATAATAATATAT GCCATCGTGTAGAAGCACTCTGTTTTGTTATGGGCAAAACCAAAATCAGTAGCGGTGAGCGGGACACAAATGGTGCGACGACGGACCAGACAAAGCTTGCGAAATCGTTGATTGACCCGGTTGACAAGACTGTAGATAGGGATCTAAATCTTGTAAGGGAATTGGGCCTGAAGCTTGTATATGCTATGAATACTCATGTTCATGCTGATCATGTCACTGGGACTGGACTCATCAAGAGTAAATTTCCAGGAGCTAAATCTGTTATCTCGAGAGCAAGTGGCTCCAAAGCTGATGTGTTGATTGAACCTGGCGATAGAATTTCTATTGGTGATCTATTCCTGGAGGTTCGTGCAACTCCGGGACATACATCAGGATGTGTCACCTATGTAACAGGGGATGAACCTGATCAGCCTTATCCTAGGATGGCATTCACTGGGGATACTCTGTTGATACGTGGATGTGGGAGGACAGATTTTCAGGGTGGAAGTTCGAAGCAGCTCTATGAATCTGTCCATTCACAGATTTTCACTCTGCCAAAGGATACACTGATCTATCCAGCTCATGATTACAAGGGATTTAGTGTTAGTACTGTAGGTGAAGAAATGGCATACAATCCTCGGCTTACCAAGGATCTGGAAGAATTCAAGAAGATCATGGAAAATTTGAACTTGGCTTATCCAAAGATGATGGACATAGCAGTTCCAGCAAATTTGGTGTGTGGATTGCAAGATCCAGCTTGTTAGCTCTCTTAGTCATCCATGTGATTCATTGTGTATAATTGGCCTATCTTACTATAAAATCGAAATGAGATAAAAATAAAGATCAATCGGAGCTATAGGCTGAGAGGTGCGACTTGTGAGTTCCACAAACAAAAATAATAATATAT ATGGGCAAAACCAAAATCAGTAGCGGTGAGCGGGACACAAATGGTGCGACGACGGACCAGACAAAGCTTGCGAAATCGTTGATTGACCCGGTTGACAAGACTGTAGATAGGGATCTAAATCTTGTAAGGGAATTGGGCCTGAAGCTTGTATATGCTATGAATACTCATGTTCATGCTGATCATGTCACTGGGACTGGACTCATCAAGAGTAAATTTCCAGGAGCTAAATCTGTTATCTCGAGAGCAAGTGGCTCCAAAGCTGATGTGTTGATTGAACCTGGCGATAGAATTTCTATTGGTGATCTATTCCTGGAGGTTCGTGCAACTCCGGGACATACATCAGGATGTGTCACCTATGTAACAGGGGATGAACCTGATCAGCCTTATCCTAGGATGGCATTCACTGGGGATACTCTGTTGATACGTGGATGTGGGAGGACAGATTTTCAGGGTGGAAGTTCGAAGCAGCTCTATGAATCTGTCCATTCACAGATTTTCACTCTGCCAAAGGATACACTGATCTATCCAGCTCATGATTACAAGGGATTTAGTGTTAGTACTGTAGGTGAAGAAATGGCATACAATCCTCGGCTTACCAAGGATCTGGAAGAATTCAAGAAGATCATGGAAAATTTGAACTTGGCTTATCCAAAGATGATGGACATAGCAGTTCCAGCAAATTTGGTGTGTGGATTGCAAGATCCAGCTTGTTAG MGKTKISSGERDTNGATTDQTKLAKSLIDPVDKTVDRDLNLVRELGLKLVYAMNTHVHADHVTGTGLIKSKFPGAKSVISRASGSKADVLIEPGDRISIGDLFLEVRATPGHTSGCVTYVTGDEPDQPYPRMAFTGDTLLIRGCGRTDFQGGSSKQLYESVHSQIFTLPKDTLIYPAHDYKGFSVSTVGEEMAYNPRLTKDLEEFKKIMENLNLAYPKMMDIAVPANLVCGLQDPAC*
BLAST of Cucsa.058190.2 vs. Swiss-Prot
Match: ETHE1_ARATH (Persulfide dioxygenase ETHE1 homolog, mitochondrial OS=Arabidopsis thaliana GN=GLY3 PE=1 SV=3) HSP 1 Score: 364.8 bits (935), Expect = 7.3e-100 Identity = 172/208 (82.69%), Postives = 191/208 (91.83%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. Swiss-Prot
Match: ETHE1_HUMAN (Persulfide dioxygenase ETHE1, mitochondrial OS=Homo sapiens GN=ETHE1 PE=1 SV=2) HSP 1 Score: 264.6 bits (675), Expect = 1.0e-69 Identity = 132/209 (63.16%), Postives = 155/209 (74.16%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. Swiss-Prot
Match: ETHE1_MOUSE (Persulfide dioxygenase ETHE1, mitochondrial OS=Mus musculus GN=Ethe1 PE=1 SV=2) HSP 1 Score: 262.3 bits (669), Expect = 5.1e-69 Identity = 130/209 (62.20%), Postives = 156/209 (74.64%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. Swiss-Prot
Match: ETHE1_BOVIN (Persulfide dioxygenase ETHE1, mitochondrial OS=Bos taurus GN=ETHE1 PE=2 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.3e-67 Identity = 128/209 (61.24%), Postives = 153/209 (73.21%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. Swiss-Prot
Match: BLH_AGRFC (Beta-lactamase hydrolase-like protein OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=blh PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.6e-22 Identity = 80/222 (36.04%), Postives = 108/222 (48.65%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. TrEMBL
Match: A0A0A0L360_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G621190 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 1.7e-132 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. TrEMBL
Match: A0A0D2R0J5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G043100 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.4e-102 Identity = 181/208 (87.02%), Postives = 195/208 (93.75%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. TrEMBL
Match: A0A0D2Q7S1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G043100 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.4e-102 Identity = 181/208 (87.02%), Postives = 195/208 (93.75%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. TrEMBL
Match: A0A0B0PY24_GOSAR (Hydroxyacylglutathione hydrolase 3, mitochondrial-like protein OS=Gossypium arboreum GN=F383_11130 PE=4 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 1.2e-101 Identity = 180/208 (86.54%), Postives = 194/208 (93.27%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. TrEMBL
Match: B9GGY3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s38910g PE=4 SV=2) HSP 1 Score: 376.7 bits (966), Expect = 2.1e-101 Identity = 180/208 (86.54%), Postives = 195/208 (93.75%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. TAIR10
Match: AT1G53580.1 (AT1G53580.1 glyoxalase II 3) HSP 1 Score: 364.8 bits (935), Expect = 4.1e-101 Identity = 172/208 (82.69%), Postives = 191/208 (91.83%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. TAIR10
Match: AT3G10850.1 (AT3G10850.1 Metallo-hydrolase/oxidoreductase superfamily protein) HSP 1 Score: 80.5 bits (197), Expect = 1.6e-15 Identity = 52/165 (31.52%), Postives = 86/165 (52.12%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. TAIR10
Match: AT2G31350.1 (AT2G31350.1 glyoxalase 2-5) HSP 1 Score: 70.1 bits (170), Expect = 2.1e-12 Identity = 50/157 (31.85%), Postives = 80/157 (50.96%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. NCBI nr
Match: gi|700199849|gb|KGN55007.1| (hypothetical protein Csa_4G621190 [Cucumis sativus]) HSP 1 Score: 479.9 bits (1234), Expect = 2.5e-132 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. NCBI nr
Match: gi|778695557|ref|XP_011654015.1| (PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial [Cucumis sativus]) HSP 1 Score: 430.3 bits (1105), Expect = 2.3e-117 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. NCBI nr
Match: gi|659127377|ref|XP_008463671.1| (PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial [Cucumis melo]) HSP 1 Score: 420.6 bits (1080), Expect = 1.8e-114 Identity = 206/211 (97.63%), Postives = 207/211 (98.10%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. NCBI nr
Match: gi|823130715|ref|XP_012454378.1| (PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial isoform X1 [Gossypium raimondii]) HSP 1 Score: 380.6 bits (976), Expect = 2.1e-102 Identity = 181/208 (87.02%), Postives = 195/208 (93.75%), Query Frame = 1
BLAST of Cucsa.058190.2 vs. NCBI nr
Match: gi|823130719|ref|XP_012454390.1| (PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial isoform X3 [Gossypium raimondii]) HSP 1 Score: 380.6 bits (976), Expect = 2.1e-102 Identity = 181/208 (87.02%), Postives = 195/208 (93.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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