Cucsa.058190.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCATCGTGTAGAAGCACTCTGTTTTGTTATGGGCAAAACCAAAATCAGTAGCGGTGAGCGGGACACAAATGGTGCGACGACGGACCAGACAAAGCTTGCGAAATCGGTATCTGACAAATCTTCCATTTCATATCCATTGATGACGATGATTCCACCTCCTCCTCTATCCCATTTCTCTTAAACTATTCACTAAATTACTATTATCCTTCCCCCACCTTTCAATCTTGTTTTAGTCAATAACAAGGCGCGATGATGCATACCTGTCGGTTCTTACGAATTCCATCGTTTCATCCCAATGCTCTATGCTTCTTCTCTCAAACTCCTCATCTTCTTTCTCTCAAACCCGTTTCCTCAATTCCCCTTAGGAATTTCAGTTCTCAAATGGGGTCATCGCCATCTTCTTCCTTCTCTAAGCTCTTGTTTCGTCAGTTGTTCGAGAAGGATTCTTCCACTTATACTTATCTTCTCGCTGATGTTTCTCATCCTGATAAACCAGCGCTTGTAATTTCCTTTATCTAATCTCTCTTTTCTATGTTAGTGTTTGGCTGTTTAAATTGAAATTTGATGAAATGTGTAATGGCTTTGTTTCGTTTCGTTTCGTTTCGTTTCATCAATGTTTTGGGCATGTTTTCTGAGTTTGGTTGGAAAGTTTGGTCAAAAGCATTAATGGGTTTTTCGATTCTCCTGTTTTTTTTCTTTTTCTTCTTTCAGTTGATTGACCCGGTTGACAAGACTGTAGATAGGGATCTAAATCTTGTAAGGGAATTGGGCCTGAAGCTTGTATATGCTATGAATACTCATGTTCATGCTGATCATGTCACTGGGACTGGACTCATCAAGGTTTTTCTTCTCCATCATCATTTTTGTTGGTGATTGCTCAATCCCAGTTATTGTTTTCTCAGTGTCTGACTTTATTGTTATTTTTGTTTTTTATGCGTTTACTTCCTTCAGAGTAAATTTCCAGGAGCTAAATCTGTTATCTCGAGAGCAAGTGGCTCCAAAGCTGATGTGTTGATTGAACCTGGCGATAGAATTTCTATTGGTGATCTATTCCTGGAGGTATGCCAATACTTTTATTTAATACTACAAAACAAAGACACAGTACAGATCTCTGTTTGTTTTCATAGTTAGGATTCCAGCATTTTATCAAGACTATCCATCATCTTTGCCATCACATAGGAGTCTAGGACTGGTGACAGTTCATCAGCATAATATATCTGCTCGGTATTTGTATTGATCTCTAAACTTCCCTTAGCTTAGTGACGATCTCTCATGTTGAAAACCTAATCGAATTCTTGACATAGTGTAGCTTGGTTAGTTGATGTTGGCTATGACATTTTACATGCCACCAGACCTCGTCCGGCCACCACACAGTGCAGAGAAATCGCAAGGACTTTCCTGCCATCTAATTTCAGACTTTATAGATTACTACTTCATATGATAATGACCATGAGTTCTGAAAGAGTAAACACCGATCCATTTCTTCTTGAGTGTTTCAATACTACAAAAAACCTGCTGTGACCATTTACAGAAAGGTTATGCACTTTTGTTCCAGAAATGCTCCTTTGACTTATTACCCTCCTGTAATATTACATACTGCAGCTAGCTCCTCTGTCTCCTATTTTCTTTTGAGATGTGGCTCCGCATCATTACTTCTTTTGTTGTTTGTTCATTATTCCTCTAATTCTATCAATAATAAATAACATTACCTTTCACTGAAAGTAAAGATGTACTGCAAAGATATTTTCTCTGGTTCCTTGTTGATGATAACAAATCAGAAATTGGAATACTTCATAAATGTAGTAGGTGATTTCACATGGAGGAGTGAGGAATGAAATAGTTTAGGGTTTTAGAGACTTGATGTGTCACTGTCACCCCTGATTTTCCTCTCTAACACAGAGGTGGAGGAACATATAAATAGCATAGGGAATCTTAGTAAGGAAGTTTCGATTAGATTTTCCATCACCATCAGTTTAGGGAAGTTTCCAAATGACTGCTCAGTAAAGATTTAGTTTGCCATTGGAGGGTAATATGCAATGAGCATTTTTACCTCCTTAGATATCACAAGCTTTGAATGAAAAACTGATATGCCATGTTAGTTTTTCAGAAGTATAAGTGGTTTCATAGACTCTGATGTCAATAGTAAAGTTCCTGAACCCAGACTGAGCAAAATTTTCTTTTCAAAAAAGAATATACGCTCACAAAGGATTTATCATTAAGTAAAGCGATGTTAAGAAAAAAGATAAACTTTGGGGACAATCCTAGAGTTGACTCTTGTCTCCACTTTATATTGCATATAATTTCAGGTTCGTGCAACTCCGGGACATACATCAGGATGTGTCACCTATGTAACAGGGGATGAACCTGATCAGCCTTATCCTAGGATGGCATTCACTGGGGATACTCTGTTGATACGTGGATGTGGGAGGACAGATTTTCAGGTTACTTTCACTCTTTGACTTATTATTTAATTGTTGATGATAGTCCTCGAGTAGTTCTCGAAAATATTGGTATTTTGGATTAAGATATTTCAGTATAATACTTTGACTGTCATATTTCCTCTAGCTTGGGACTCTCTGTACATTTAACTGTTTTTCCAAACTTCTCTCATATCTACTTCACGGTAGAGTTTTCTGTTTTATTATAAAACATCAATTGATAAAGAGAGCTGGTATCATTTTTATTGCACAACAACCGCGAAAAACTTTGTTTTGACTTATGGGGTTACTGGAACCATTATGAACTATTAACTAATCATTTAGGTGTAAACGTTTGCCTAATGAATCACAACCATTCTGCATGATTATGGGCTATTCTTGAGCTTTATTGCCACTAGGCTGAATGCCAGCGTCTTTTGCAGGGTGGAAGTTCGAAGCAGCTCTATGAATCTGTCCATTCACAGGTAAGAACATGAACTCAGTATATTTGCCACGAAAAATTGGAACAAGTAACTGGGGGATAAGAAGAACTAATGATCAGTATATATGGCGTTTCTTTGTTTTAGCTTTTTGTAACACCAACACGTTCTGATTTATTAACTCTGTGCCAGATTTTCACTCTGCCAAAGGATACACTGATCTATCCAGCTCATGATTACAAGGGATTTAGTGTAAGAAAATTTCTATGCCTGTTCTTTCTTCGAAAACTTGGTTCATTCTCTCATATCTGACTTCCAATTTCAGGTTAGTACTGTAGGTGAAGAAATGGCATACAATCCTCGGCTTACCAAGGATCTGGTAATTTCTTTAGTAACTAAAACCACTTATCTGGAAATTGCATTTCAAAGCAGAATTATAGTTACTAAATTTTTTGCTTTCACATCTAAAGTTTGTAATTTTTATTTTACCTGGGTTTTTTTTGTTTTGCAGGAAGAATTCAAGAAGATCATGGAAAGTAAGTACATAAAAACAAAAATATAATATGGTGTAAACGGATTGTCTCTTCTATAACAACTATATTGTTTCTCTGTCTCAGATTTGAACTTGGCTTATCCAAAGATGATGGACATAGCAGTTCCAGCAAATTTGGTGTGTGGATTGCAAGATCCAGCTTGTTAGCTCTCTTAGTCATCCATGTGATTCATTGTGTATAATTGGCCTATCTTACTATAAAATCGAAATGAGATAAAAATAAAGATCAATCGGAGCTATAGGCTGAGAGGTGCGACTTGTGAGTTCCACAAACAAAAATAATAATATAT GCCATCGTGTAGAAGCACTCTGTTTTGTTATGGGCAAAACCAAAATCAGTAGCGGTGAGCGGGACACAAATGGTGCGACGACGGACCAGACAAAGCTTGCGAAATCGGTATCTGACAAATCTTCCATTTCATATCCATTGATGACGATGATTCCACCTCCTCCTCTATCCCATTTCTCTTAAACTATTCACTAAATTACTATTATCCTTCCCCCACCTTTCAATCTTGTTTTAGTCAATAACAAGGCGCGATGATGCATACCTGTCGGTTCTTACGAATTCCATCGTTTCATCCCAATGCTCTATGCTTCTTCTCTCAAACTCCTCATCTTCTTTCTCTCAAACCCGTTTCCTCAATTCCCCTTAGGAATTTCAGTTCTCAAATGGGGTCATCGCCATCTTCTTCCTTCTCTAAGCTCTTGTTTCGTCAGTTGTTCGAGAAGGATTCTTCCACTTATACTTATCTTCTCGCTGATGTTTCTCATCCTGATAAACCAGCGCTTTTGATTGACCCGGTTGACAAGACTGTAGATAGGGATCTAAATCTTGTAAGGGAATTGGGCCTGAAGCTTGTATATGCTATGAATACTCATGTTCATGCTGATCATGTCACTGGGACTGGACTCATCAAGAGTAAATTTCCAGGAGCTAAATCTGTTATCTCGAGAGCAAGTGGCTCCAAAGCTGATGTGTTGATTGAACCTGGCGATAGAATTTCTATTGGTGATCTATTCCTGGAGGTTCGTGCAACTCCGGGACATACATCAGGATGTGTCACCTATGTAACAGGGGATGAACCTGATCAGCCTTATCCTAGGATGGCATTCACTGGGGATACTCTGTTGATACGTGGATGTGGGAGGACAGATTTTCAGGGTGGAAGTTCGAAGCAGCTCTATGAATCTGTCCATTCACAGATTTTCACTCTGCCAAAGGATACACTGATCTATCCAGCTCATGATTACAAGGGATTTAGTGTTAGTACTGTAGGTGAAGAAATGGCATACAATCCTCGGCTTACCAAGGATCTGGAAGAATTCAAGAAGATCATGGAAAATTTGAACTTGGCTTATCCAAAGATGATGGACATAGCAGTTCCAGCAAATTTGGTGTGTGGATTGCAAGATCCAGCTTGTTAGCTCTCTTAGTCATCCATGTGATTCATTGTGTATAATTGGCCTATCTTACTATAAAATCGAAATGAGATAAAAATAAAGATCAATCGGAGCTATAGGCTGAGAGGTGCGACTTGTGAGTTCCACAAACAAAAATAATAATATAT ATGATGCATACCTGTCGGTTCTTACGAATTCCATCGTTTCATCCCAATGCTCTATGCTTCTTCTCTCAAACTCCTCATCTTCTTTCTCTCAAACCCGTTTCCTCAATTCCCCTTAGGAATTTCAGTTCTCAAATGGGGTCATCGCCATCTTCTTCCTTCTCTAAGCTCTTGTTTCGTCAGTTGTTCGAGAAGGATTCTTCCACTTATACTTATCTTCTCGCTGATGTTTCTCATCCTGATAAACCAGCGCTTTTGATTGACCCGGTTGACAAGACTGTAGATAGGGATCTAAATCTTGTAAGGGAATTGGGCCTGAAGCTTGTATATGCTATGAATACTCATGTTCATGCTGATCATGTCACTGGGACTGGACTCATCAAGAGTAAATTTCCAGGAGCTAAATCTGTTATCTCGAGAGCAAGTGGCTCCAAAGCTGATGTGTTGATTGAACCTGGCGATAGAATTTCTATTGGTGATCTATTCCTGGAGGTTCGTGCAACTCCGGGACATACATCAGGATGTGTCACCTATGTAACAGGGGATGAACCTGATCAGCCTTATCCTAGGATGGCATTCACTGGGGATACTCTGTTGATACGTGGATGTGGGAGGACAGATTTTCAGGGTGGAAGTTCGAAGCAGCTCTATGAATCTGTCCATTCACAGATTTTCACTCTGCCAAAGGATACACTGATCTATCCAGCTCATGATTACAAGGGATTTAGTGTTAGTACTGTAGGTGAAGAAATGGCATACAATCCTCGGCTTACCAAGGATCTGGAAGAATTCAAGAAGATCATGGAAAATTTGAACTTGGCTTATCCAAAGATGATGGACATAGCAGTTCCAGCAAATTTGGTGTGTGGATTGCAAGATCCAGCTTGTTAG MMHTCRFLRIPSFHPNALCFFSQTPHLLSLKPVSSIPLRNFSSQMGSSPSSSFSKLLFRQLFEKDSSTYTYLLADVSHPDKPALLIDPVDKTVDRDLNLVRELGLKLVYAMNTHVHADHVTGTGLIKSKFPGAKSVISRASGSKADVLIEPGDRISIGDLFLEVRATPGHTSGCVTYVTGDEPDQPYPRMAFTGDTLLIRGCGRTDFQGGSSKQLYESVHSQIFTLPKDTLIYPAHDYKGFSVSTVGEEMAYNPRLTKDLEEFKKIMENLNLAYPKMMDIAVPANLVCGLQDPAC*
BLAST of Cucsa.058190.1 vs. Swiss-Prot
Match: ETHE1_ARATH (Persulfide dioxygenase ETHE1 homolog, mitochondrial OS=Arabidopsis thaliana GN=GLY3 PE=1 SV=3) HSP 1 Score: 431.8 bits (1109), Expect = 6.1e-120 Identity = 218/294 (74.15%), Postives = 243/294 (82.65%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. Swiss-Prot
Match: ETHE1_MOUSE (Persulfide dioxygenase ETHE1, mitochondrial OS=Mus musculus GN=Ethe1 PE=1 SV=2) HSP 1 Score: 288.5 bits (737), Expect = 8.3e-77 Identity = 147/247 (59.51%), Postives = 179/247 (72.47%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. Swiss-Prot
Match: ETHE1_HUMAN (Persulfide dioxygenase ETHE1, mitochondrial OS=Homo sapiens GN=ETHE1 PE=1 SV=2) HSP 1 Score: 286.6 bits (732), Expect = 3.2e-76 Identity = 147/247 (59.51%), Postives = 176/247 (71.26%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. Swiss-Prot
Match: ETHE1_BOVIN (Persulfide dioxygenase ETHE1, mitochondrial OS=Bos taurus GN=ETHE1 PE=2 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 7.8e-75 Identity = 144/247 (58.30%), Postives = 175/247 (70.85%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. Swiss-Prot
Match: BLH_AGRFC (Beta-lactamase hydrolase-like protein OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=blh PE=2 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.5e-22 Identity = 80/222 (36.04%), Postives = 108/222 (48.65%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. TrEMBL
Match: A0A0D2R0J5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G043100 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 1.3e-121 Identity = 221/280 (78.93%), Postives = 241/280 (86.07%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. TrEMBL
Match: A0A0B0PY24_GOSAR (Hydroxyacylglutathione hydrolase 3, mitochondrial-like protein OS=Gossypium arboreum GN=F383_11130 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 1.1e-120 Identity = 220/280 (78.57%), Postives = 240/280 (85.71%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. TrEMBL
Match: B9GGY3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s38910g PE=4 SV=2) HSP 1 Score: 438.3 bits (1126), Expect = 7.2e-120 Identity = 215/252 (85.32%), Postives = 232/252 (92.06%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. TrEMBL
Match: A0A067E647_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022158mg PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 7.2e-120 Identity = 226/296 (76.35%), Postives = 248/296 (83.78%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. TrEMBL
Match: V4JX96_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011701mg PE=4 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 9.4e-120 Identity = 222/295 (75.25%), Postives = 246/295 (83.39%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. TAIR10
Match: AT1G53580.1 (AT1G53580.1 glyoxalase II 3) HSP 1 Score: 431.8 bits (1109), Expect = 3.4e-121 Identity = 218/294 (74.15%), Postives = 243/294 (82.65%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. TAIR10
Match: AT3G10850.1 (AT3G10850.1 Metallo-hydrolase/oxidoreductase superfamily protein) HSP 1 Score: 87.4 bits (215), Expect = 1.6e-17 Identity = 58/173 (33.53%), Postives = 91/173 (52.60%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. TAIR10
Match: AT2G31350.1 (AT2G31350.1 glyoxalase 2-5) HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12 Identity = 54/173 (31.21%), Postives = 85/173 (49.13%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. NCBI nr
Match: gi|778695557|ref|XP_011654015.1| (PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial [Cucumis sativus]) HSP 1 Score: 599.4 bits (1544), Expect = 3.5e-168 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. NCBI nr
Match: gi|659127377|ref|XP_008463671.1| (PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial [Cucumis melo]) HSP 1 Score: 574.7 bits (1480), Expect = 9.3e-161 Identity = 281/294 (95.58%), Postives = 287/294 (97.62%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. NCBI nr
Match: gi|823130715|ref|XP_012454378.1| (PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial isoform X1 [Gossypium raimondii]) HSP 1 Score: 444.1 bits (1141), Expect = 1.9e-121 Identity = 221/280 (78.93%), Postives = 241/280 (86.07%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. NCBI nr
Match: gi|568848274|ref|XP_006477942.1| (PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial [Citrus sinensis]) HSP 1 Score: 443.0 bits (1138), Expect = 4.2e-121 Identity = 226/298 (75.84%), Postives = 252/298 (84.56%), Query Frame = 1
BLAST of Cucsa.058190.1 vs. NCBI nr
Match: gi|728849931|gb|KHG29374.1| (Hydroxyacylglutathione hydrolase 3, mitochondrial -like protein [Gossypium arboreum]) HSP 1 Score: 441.0 bits (1133), Expect = 1.6e-120 Identity = 220/280 (78.57%), Postives = 240/280 (85.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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