Cucsa.058090.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATCCAAATCAAAATCTACTGTTTTGGGACATTAACTTGGAACTCAACAACACCAAAAAATCTCCTCTCTTATCCACTCCTTTTCACTTTTGTATACAACCAATTCAAAATCCCACTCACAGTTTTGAAAAAGCAGAAGAACTCTCTACAATGGCTGCAAATGCTGTAAATTCCACCCCATTAAGCCTCCCATTATCCATTCCTACTGGGAAATTGAATTCCAGTCCTACAATTTGCCTTTTAACAAAACCCTCAATTCCTACTCTCTCAATTCACTCTACTTTCTCTCTCAGCAACAACAACTTCAGATTTTATTCCAATTTCTCTCTCAGACCTTCTTCTTCTCTTGCTTCAGGTATCGAAATGTTGAATCATTCTTCCCCATATCTGCTGCTTTTGAACCTTGTATTCGTTATTTTGATGTTAATGGTGAGAAAATATGAAACGATTCTTGGGTTTCTGCTTGAGATCGAGCTTTAGGGTCTGTTTGGATTGGCTTTGTAAGTAGCACAAATGTGGTTTTGAGTGAAAGTAAAAGTGTTTTTATTCGTTTAGAAAATCGATCTAAATAGACAATCTGTTTTTAAAATTTGGAGTTTAGGGTTTGATTCATTTTATGAAAACAAATTTGTTGTTGAGAACAGATGAAGTTAAGGGTAATGTTGAGTAAAGACTGTAGCTATTTGTAATCAAGGGATGTGTTCATTCATGTGCAAAGCATCTCGGAACTGAAATATGCCGGAAAGTTCTCAAAACCAAAATTTTTATGAATATCTAGGTTTAATGTACATTTGGAAGTGATTTTGAAATGATTAACATCGTATTCAGAGAATCACTTTTGGAGGTGATTTAAAGCGATCTTGGACATGAAAAAAAGTGATCTAAACCTTTAACGATCTTTTGGATTGATTGAAGGAAAAAATATTGTGCTGATTGAGAGATTGTATCACTTTTAAACCAACAATCTTCTTCTCGAACAACGGACCACAAGCGGTCTTTTGCATTGTTGAAAAAAATATTTTTCAAAAAATTCATTTTTTTAGGACTCTTTTGATAAAAGGGTTATCAAACACTCTCATTTTTAAAAAAAATGATTTTTAAATTAAACACTTGAAACTGCATTCCAAACGCACTTAAGTCTCATATTGAAATGGATAGAGCATTGGCTCAAAAACACTTGAAAATCGTAATCTTGTTGTCTAATAATGTTCCATTGACTTAATTTGAAGTTGTAGGAAGAATAATATTTCATTTTTGTTATTTTTCTGAGAAAGTATTACTGAAACACTTTGCTTTTTAATCAATGGTTTACAACAGTTGGAAATGCAGGATTTGTGGAGGAACCTTCAACCAATGTAAAATTTCCAACGTCCTTAACTCTGCCAGGCTGCTCAACTTCGCTGTCGCTGCTTGGCACAGGTCAGTTCACCATGTTTTATACACTGAATTCTACTGAGAAATACAACTGATTTTATGAAAATTTAAACTGTCAAAATCATCTACAGCTCATATTTTTCCTGCAATGTGTATAAGATAAGAGAACCATTAGAACCAAAAGCTCTATCACTGTATGCTGCAATTGGTATTTGGTGCATAAGTTGCATTTCTGCAGGAAAAAAAATATGCTTCCAGCCATCTAAAATGAGACAATTTTTTACATCTTTTTAGAATCAAACAAAACGATAAACGAACATCGTTAAAGGCACATTTTTGTTCGTTGTAAGAAGTTGATTATTTATTATCCTAAGGCTACCTATGACTTTTATACATCCAAAATGTTGATACTTTGAACTGAACAATATTCTTCAACCTGATCGTCATAAAGCTGCAAATATTTCAGGTTATAGAGAGAAAGTATTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCTGTCTCAAATGAATTAAATGCTTGGAGGGGACGATCAGCTGCTGCAATTCAGGAGGACTCTTCCTTGTTTGATATAATTTTTCAGTGTAATAACCATACATATAAATACATAACTGTATGATTATAGAAGTTGTGGAAAGTGAGAATGATAATCTCCTTTTCCATTTTTTCCAATGGCTTCAAGGTTGTGTAAGTAACTATAAGTTTATTATCTTCTAATGGCAGCTCGTTCAGAAAAATCTTTACAGATTGTTCTTGTCCGAGACGTCGATGGAAAAACTTTCTGGGACGCCTTGGATGATGCCATTTCTCCAAGAATCAAAGCACCAACACCGGATGATGAATCTGCATTATCTACCTTTCGTAGCATCTTTGAGGGACGATCTCTTAAGAAAGGAACTTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTCGTATGTTTGAATTTTAACTGAACAACATTCTCTATTCTTTTCCAGCCAATAATGATATTGCATAGACACTCTTAGTTTCATATTTGAGCAAGTTTCGTTCTGTTTATTCTGATGCGGAGAATTGATGAATTTCAGGTTAGCATCTCGATAGATGGCTCACCAACAGGAATAGATGCTACAATTGAATCAAATAATGTGACTTCGTCTCTTTTTGATGTTTTTTTCGGAGACTCTCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAACTGGATTGGCTGCAGTTTTGAAATAGAACCACAATTTTCTTGTACTTTTATTAGTTTGAATGAAGATTTGGATATGGTTCCACCAAAAAAGTTACAAATGAGAGATTGCAATAAGTGTAATACAAGTTAGAGAAGGGACTGACTCAAGAATCCGTTACATTGCTATTTGACCTTATCTGCTCAAGCACTTTAACAACCTCTGCCATTGTTGGACGCTGAGCGGGTTCCGGTTCAAGACACTTCAATGCAATGCTAAATACGACATTAACCTCATCAACCGGACAACAGCCCAAACGACGGTCAAGTACATATTCTTCCCTTTTCTCCTGAACAACTGTTTTCACCTGTCATTTACATGACACCATGAAAATTAGATAAGGAATAGCTTGTTGTTCAAGTATATACTCTTTATGTGAATGATGTTTCCAATTTATAGCACTTGAGTACTCAATCCATTGCCTCATGAAAAATGTCACTGCAACATCTTGGCTGTTGGTGAAATGAATGGCTTAAACGGAACGGTTTACTCGAACGCATCAATTAAAAACTATTCATTTGTAGAATCAATATTCATGATCAACCAACCTAGAAGCTCTATGACTTTCTTAGGCTACTGAAAATGGTTCATGATTCGCTTACCCATGTCACAAGTTTAGTTCCCTCTTCCATAAACGCCTCATCAGTCGGTTTTTTCCCTGTTAAGAGCTCGAGAAGTACTACACCAAAGCTGTAGACATCTCCTTTCACCGTTGCTCGACCCGTATCAAAGTATTCTGCCAAAATGAAGTTAGTATTTTCCATGTCAAGGGAGCGGTGAAGTAGAATAGCTTGTTAAATTCTACCTGGAGCCAAGTACCCAAATGTGCCTGCCACAATTGTTGATACATGAGTCTTGTCAGGTTCCATCAGCGTCGCCAATCCAAAGTCAGACACTTGAGCGTCCATGTTTTCATCCAACAATATGTTGCTTGACTTGATATCTCTATGTATGATGTGTGGGATACAGTCGTGATGAAGGTATGATATTCCTCTCGCTGCACCTACCGCTATTTTGTAGCGTGATGACCAATCCAAAACCTTCTCATTTGATTTTCCTGAGTACCATCAAATTTAGGACAGAATAATGTATATATCATCATTAAGAAGTTTAGAAAAACTGAAGGTTTTGATATATATACATATACCATGTAGATATGCATACAAACTTCCATTAGGCATTAGCTCATATACAAGAAGATTATAGTGAGGAGCAGTGTAGTATCCATAAAGCGTCACAACATTCCGATGTTTTATATCGCCCATAGCCTCCAATTCTCTCTCAAATCCTTGATCTCTTTCTGCACTTCCTCTGTTCAGTCTTTTCACAGCAAATCTCATAGAATCACTTAGTGCAAGTTTGTAAACAATCCCATGCCCTCCAGAGCCAATGATGTCCTTGTTGTTTAGTTTTAGTGTTTTCTTCAGGAATGCATCTGATTTTAAGGACTTTGTTGCTGGAGACTTGAACATGACCATCTTCCCACCTGATCATATACATTCGTATTAAACTTGTTACTCTCGCAAGTCGCACCATCTTTAATTCAACTAACTCTATGCATTCTCCTTGTCAAGTTCTGCTTATCAGATTTGGAAATGTTCATACCTGATATCCCATCTTCATATATTATGTGTCTTCTTTTCCAGCGCTTGTAAAGGAGCAATGCTATGAAGATCTTCGACACGACAAAAGCGATGCAACTGATTGTGACATAGAATGCTATAGCCTGGCCTTTATCCATTTGATTATGCAGACCATGAAAAAATTCAGAACAGTTTACATGGAAGACAACCTCAAACTTGTCACATTTCCTCCATTTAACTCTCCATGAAAGTACAAGTTGACTTTCTTTTCAACATATTTCTGAGTTTCAGTGAGCTAAAGTAGCTGAAGGCTTTTCTCTGCTACAAATGTAAGATACAGAAAAAACTTAATAACACCAATACAGAGATGACATTAGCAACCACAATCTCCAAGATCCATGTGGTTGGGCCAGTTTTCGAAAGACACAGAACATTTTTCATGAATTTTTCTGGACAAAAAGGAACTTCAAGAATGGAGCTTAAAACAAAGAAGCAAAAAGGACTTGGTCCATCAAGAGAATGCAAGATTTCAACAGAGAAACATAACAAAAACCAAAGCCAAAAAGAGAAAAGTGCTGTATAAATAAACTTACCGCATCTTCATCAGTTGTGGCATGAACAGGAATGGAAAGAAGAACAAGAAATAAGATGCATAATTGCAAGAAGATAACAGCTTTGCTTCAGAGACTTAT AAATCCAAATCAAAATCTACTGTTTTGGGACATTAACTTGGAACTCAACAACACCAAAAAATCTCCTCTCTTATCCACTCCTTTTCACTTTTGTATACAACCAATTCAAAATCCCACTCACAGTTTTGAAAAAGCAGAAGAACTCTCTACAATGGCTGCAAATGCTGTAAATTCCACCCCATTAAGCCTCCCATTATCCATTCCTACTGGGAAATTGAATTCCAGTCCTACAATTTGCCTTTTAACAAAACCCTCAATTCCTACTCTCTCAATTCACTCTACTTTCTCTCTCAGCAACAACAACTTCAGATTTTATTCCAATTTCTCTCTCAGACCTTCTTCTTCTCTTGCTTCAGTTGGAAATGCAGGATTTGTGGAGGAACCTTCAACCAATGTAAAATTTCCAACGTCCTTAACTCTGCCAGGCTGCTCAACTTCGCTGTCGCTGCTTGGCACAGGTTATAGAGAGAAAGTATTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCTGTCTCAAATGAATTAAATGCTTGGAGGGGACGATCAGCTGCTGCAATTCAGGAGGACTCTTCCTTGTTTGATATAATTTTTCAGTCTCGTTCAGAAAAATCTTTACAGATTGTTCTTGTCCGAGACGTCGATGGAAAAACTTTCTGGGACGCCTTGGATGATGCCATTTCTCCAAGAATCAAAGCACCAACACCGGATGATGAATCTGCATTATCTACCTTTCGTAGCATCTTTGAGGGACGATCTCTTAAGAAAGGAACTTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTCGTTAGCATCTCGATAGATGGCTCACCAACAGGAATAGATGCTACAATTGAATCAAATAATGTGACTTCGTCTCTTTTTGATGTTTTTTTCGGAGACTCTCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAACTGGATTGGCTGCAGTTTTGAAATAGAACCACAATTTTCTTGTACTTTTATTAGTTTGAATGAAGATTTGGATATGGTTCCACCAAAAAAGTTACAAATGAGAGATTGCAATAAGTGTAATACAAGTTAGAGAAGGGACTGACTCAAGAATCCGTTACATTGCTATTTGACCTTATCTGCTCAAGCACTTTAACAACCTCTGCCATTGTTGGACGCTGAGCGGGTTCCGGTTCAAGACACTTCAATGCAATGCTAAATACGACATTAACCTCATCAACCGGACAACAGCCCAAACGACGGTCAACGCTTGTAAAGGAGCAATGCTATGAAGATCTTCGACACGACAAAAGCGATGCAACTGATTGTGACATAGAATGCTATAGCCTGGCCTTTATCCATTTGATTATGCAGACCATGAAAAAATTCAGAACAGTTTACATGGAAGACAACCTCAAACTTGTCACATTTCCTCCATTTAACTCTCCATGAAAGTACAAGTTGACTTTCTTTTCAACATATTTCTGAGTTTCAGTGAGCTAAAGTAGCTGAAGGCTTTTCTCTGCTACAAATGTAAGATACAGAAAAAACTTAATAACACCAATACAGAGATGACATTAGCAACCACAATCTCCAAGATCCATGTGGTTGGGCCAGTTTTCGAAAGACACAGAACATTTTTCATGAATTTTTCTGGACAAAAAGGAACTTCAAGAATGGAGCTTAAAACAAAGAAGCAAAAAGGACTTGGTCCATCAAGAGAATGCAAGATTTCAACAGAGAAACATAACAAAAACCAAAGCCAAAAAGAGAAAAGTGCTGTATAAATAAACTTACCGCATCTTCATCAGTTGTGGCATGAACAGGAATGGAAAGAAGAACAAGAAATAAGATGCATAATTGCAAGAAGATAACAGCTTTGCTTCAGAGACTTAT ATGGCTGCAAATGCTGTAAATTCCACCCCATTAAGCCTCCCATTATCCATTCCTACTGGGAAATTGAATTCCAGTCCTACAATTTGCCTTTTAACAAAACCCTCAATTCCTACTCTCTCAATTCACTCTACTTTCTCTCTCAGCAACAACAACTTCAGATTTTATTCCAATTTCTCTCTCAGACCTTCTTCTTCTCTTGCTTCAGTTGGAAATGCAGGATTTGTGGAGGAACCTTCAACCAATGTAAAATTTCCAACGTCCTTAACTCTGCCAGGCTGCTCAACTTCGCTGTCGCTGCTTGGCACAGGTTATAGAGAGAAAGTATTTGCAATCATTGGTGTTAAGGTCTATGCTGCAGGACTATACATCAATTCATCTGTCTCAAATGAATTAAATGCTTGGAGGGGACGATCAGCTGCTGCAATTCAGGAGGACTCTTCCTTGTTTGATATAATTTTTCAGTCTCGTTCAGAAAAATCTTTACAGATTGTTCTTGTCCGAGACGTCGATGGAAAAACTTTCTGGGACGCCTTGGATGATGCCATTTCTCCAAGAATCAAAGCACCAACACCGGATGATGAATCTGCATTATCTACCTTTCGTAGCATCTTTGAGGGACGATCTCTTAAGAAAGGAACTTTCATATTCTTGACTTGGTTGGAACCTCCAAAGATGCTCGTTAGCATCTCGATAGATGGCTCACCAACAGGAATAGATGCTACAATTGAATCAAATAATGTGACTTCGTCTCTTTTTGATGTTTTTTTCGGAGACTCTCCTGTTTCTCCTACTTTGAAGGCTTCTGTTGCAACTGGATTGGCTGCAGTTTTGAAATAG MAANAVNSTPLSLPLSIPTGKLNSSPTICLLTKPSIPTLSIHSTFSLSNNNFRFYSNFSLRPSSSLASVGNAGFVEEPSTNVKFPTSLTLPGCSTSLSLLGTGYREKVFAIIGVKVYAAGLYINSSVSNELNAWRGRSAAAIQEDSSLFDIIFQSRSEKSLQIVLVRDVDGKTFWDALDDAISPRIKAPTPDDESALSTFRSIFEGRSLKKGTFIFLTWLEPPKMLVSISIDGSPTGIDATIESNNVTSSLFDVFFGDSPVSPTLKASVATGLAAVLK*
BLAST of Cucsa.058090.1 vs. Swiss-Prot
Match: FAP3_ARATH (Fatty-acid-binding protein 3, chloroplastic OS=Arabidopsis thaliana GN=FAP3 PE=1 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.0e-76 Identity = 148/215 (68.84%), Postives = 175/215 (81.40%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.8e-12 Identity = 55/200 (27.50%), Postives = 93/200 (46.50%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. Swiss-Prot
Match: CFI_EUSER (Chalcone--flavonone isomerase OS=Eustoma exaltatum subsp. russellianum GN=CHI PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.0e-12 Identity = 56/199 (28.14%), Postives = 92/199 (46.23%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. Swiss-Prot
Match: CFI_GENTR (Chalcone--flavonone isomerase OS=Gentiana triflora GN=CHI PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11 Identity = 61/220 (27.73%), Postives = 100/220 (45.45%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. Swiss-Prot
Match: CF1B1_SOYBN (Chalcone--flavonone isomerase 1B-1 OS=Glycine max GN=CHI1B1 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.0e-11 Identity = 51/195 (26.15%), Postives = 95/195 (48.72%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. TrEMBL
Match: A0A0A0L368_CUCSA (Chalcone-flavonone isomerase family protein OS=Cucumis sativus GN=Csa_4G622760 PE=3 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 9.7e-151 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. TrEMBL
Match: E0CRY9_VITVI (Chalcone-flavonone isomerase family protein OS=Vitis vinifera GN=VIT_19s0014g00100 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 4.2e-93 Identity = 191/278 (68.71%), Postives = 221/278 (79.50%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. TrEMBL
Match: A0A061F8D2_THECC (Chalcone-flavonone isomerase family protein OS=Theobroma cacao GN=TCM_032233 PE=3 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 1.6e-89 Identity = 178/275 (64.73%), Postives = 214/275 (77.82%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. TrEMBL
Match: A0A067EAL6_CITSI (Chalcone-flavonone isomerase family protein OS=Citrus sinensis GN=CISIN_1g023649mg PE=3 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 2.4e-88 Identity = 185/283 (65.37%), Postives = 220/283 (77.74%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. TrEMBL
Match: V4VR96_9ROSI (Chalcone-flavonone isomerase family protein OS=Citrus clementina GN=CICLE_v10021578mg PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 6.9e-88 Identity = 185/283 (65.37%), Postives = 219/283 (77.39%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. TAIR10
Match: AT1G53520.1 (AT1G53520.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 288.1 bits (736), Expect = 5.8e-78 Identity = 148/215 (68.84%), Postives = 175/215 (81.40%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. NCBI nr
Match: gi|449456545|ref|XP_004146009.1| (PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis sativus]) HSP 1 Score: 540.8 bits (1392), Expect = 1.4e-150 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. NCBI nr
Match: gi|778695591|ref|XP_011654021.1| (PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 527.3 bits (1357), Expect = 1.6e-146 Identity = 274/278 (98.56%), Postives = 274/278 (98.56%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. NCBI nr
Match: gi|659103018|ref|XP_008452432.1| (PREDICTED: fatty-acid-binding protein 3 isoform X1 [Cucumis melo]) HSP 1 Score: 512.7 bits (1319), Expect = 4.1e-142 Identity = 264/278 (94.96%), Postives = 270/278 (97.12%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. NCBI nr
Match: gi|659103021|ref|XP_008452433.1| (PREDICTED: fatty-acid-binding protein 3 isoform X2 [Cucumis melo]) HSP 1 Score: 499.2 bits (1284), Expect = 4.7e-138 Identity = 260/278 (93.53%), Postives = 266/278 (95.68%), Query Frame = 1
BLAST of Cucsa.058090.1 vs. NCBI nr
Match: gi|359493644|ref|XP_002283758.2| (PREDICTED: fatty-acid-binding protein 3 [Vitis vinifera]) HSP 1 Score: 349.4 bits (895), Expect = 6.0e-93 Identity = 191/278 (68.71%), Postives = 221/278 (79.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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