Cucsa.057980.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGTTTTTGGATCACTTCTATTCTACATCCCTTCTCCACCAAAGAAATGTTGTCCCCCACAAGATAAATCTAAAATTCGTTTAAATTTCTTTTAGAAGAATAACAAATAATAAAAATCATGTTCATCAGGAAGATCCGTCCACTTCCACCCTGTTCTTTTTTTtGTCTATATAAAAAACCCATTTTCCCATTTTTTCAATTAACGAAATCCCCGTAAAATATCGTTTTTTCCCCCTTGATTCTTCTCTCTCAATTGGGTCTCCCCTTTTTCTTCTTCATCCTTCTCTTTTCGCTTCTGGGGGTTTCAAAATCGATCCCACCATTTGATTCCGGTGATATTCCGGCGGCGATATTTTTTtCTGTTGCTGCTGCATTTGTTTACAAGAGACGAAGAGTTTTTGTTGTGTCTTCAAAGTTATTCTAGATGGTTCTTCTCGGTTCCATCTTCTCAATTTGCAGGGATGCAGCTGGGGTAGCTGGTACGTCTTTTTCTTGTCTTCAATTCTTCCCTTAGTGGCTGGAGAAGTTTGTTTTGTTTGGAAAATACTTTCGGGAAATGAGTCTTCACTTCAATTTGGATATACCCTTTTGATCATTTTTGTTATAACGTGTTTCGAAATTGTTTTGTTTTGGAACCTCTTAGAGGGGAAGTGGATTTTGCCTTCAATTTGGACATGCCCTTTTGATCATTTTTGTTAATAACGTGTTCCGAAATTGGAGCTTCTGTGTTTGTTTTGCTATGTCGTTTGTTTATTGATTATTTTTCCTCCCCTGTATTTTATTTCTTTGAATCCCATTTCATTCATTTCTGCTATTTGGTATCTCATTGTATTTGTTTTGATTAAAATGAAGTTTGTTTGATGATCAGCAGTAGATTAATTAGATTAAGTTATTATGAACTCTTTGTATCTGTAAAGAACAGTGAAGGGAAGGGATTTGAAAAGATTCGTAATAGCCCCATTTGATAACCATTTTTGGGTTTTTATTTAGGTTTGGTTCATCGTCATTTCTTTTGTATTGTCTTCACCTTCAAGAAGAAAGGGTTGAATTAACAAGTTTTTGGAAATTAGAAACTAGTTTTCCTGTTTTAAGTTTAGCTACAAATTCGAAAAGATGACAAATATTGTAAAGAAAATGTGTGAAAACAATTACACTCTTGAATGATTAAAAACCAAATGATCGTTAAACTGGAACTTTAATCTTTATTTTCCTGATGAAAATTGTACTTTTATCCATTTGCAGGGCACATATTTGCTTTTGGGCTTTTCCTGTCACCCTTGTAAGTTTTAGCTATCTGCTCTACTAGACTTTCTAGATAAATAATGGTGGTAGAATTTATATGCTCATCATTTTATTGGTTTGTTTTCTTTGCGATTAATTTGCAGAGATACATTTAGACGTGTGATCAGAAACAAAACAACAGAACAGTTTTCGTGTTTGCCATACATATATGCTCTGTTAAACTGCCTTATTTGCCTATGGTATGGCACACCCCTCATTTCTCCAAGAAACACGATGGTCATGACGGTCAATTCGATCGGCGCTGTATTTCAGTTAGTCTACATCATGCTCTTCATAACATATGCTGAAAAGGGgAAAAAGGTGGTTATTAATTTGTCTATAATATGTACTGGACTATGTCTTTATGAATGATGGGAATCTGTGAAAGCCGAAAGGTCTAACTTATTGAAATATTCTCTTCATGTTGTAACAGATAAAAATGTTAGGATTGTTGCTTGGAATATTTGGCCTTTTCATAGTTATTGTTATTGGGAGCTTACAAATAGCTGACCTCTCTTTGCGACGGAATGTTGTCGGGATTTTGAGTTGTGCTTCTCTCGTATCAATGTTCGCCTCTCCCTTGTTTATTATTGTAAGTCTATTTTTAAGCTTCTTTTCTATCTTTTATTGTTGGACGTTTTTAAAGGCTTACCTACTTTTCTAGTTTTCTTACCCCTTCAATTTTCTTTGATGTGCTCTCAGAATTTGGTGATTCGAACAAAAAGTGTGGAGTTTATGCCATTTTATCTCTCGCTTTCAACCTTCCTCATGAGCATATCTTTTTtCCTCTATGGACTGTTCAATTACGATCTATTCGTTTATGTAAGCATTATCCTACCCATTTCCGTTGTTCATTGTGCTTTTACTCCATTTATTATGTGACGTAAATGTTTTTCCTGCCATACTTCAGGCCCCAAATGGGATAGGAACTCTGTTGGGGAGTGTTCAATTGGTGTTGTATTGCTACTTCAGTCGAGTTGCTAGAGAGGAGTCTAGAGAACCTCTAATTGTATCCTATGCGTAGATATGTACATTGTGTATTTACATCATGATAATGAGGTAAGATTTCAATTTCCATCTACTTTATCATCTATCCTTGTTAGCTACCGAACTTAACGATCTAGTTTTTTGGATTCCTATTATCCTTAGGACATGGTGTGGAAAATAGGAAAATAGCCAATCTGAAAATGTTTTTCATATACCGCAGGAACAACAGATTTCCAAGGGTTTGATAATTGGTTCTTCCACAGCATTGGTGTGCAGTTCGTTGTTAGCCAACGAGCCGTTCTCGGGCTACATTGTGTTTTGCTGTAAAATTACCCTCTCCATTAATTTCTCCATTTTGATTGATTGGTTTGTTTTTTCAACCCACCAATCAGTTAAATGGTGTATTTTTAGACAACCAACCCGAAATTCTCAAGAGTGAAGAATGTTGTAATATTTTTTAGCCTTGTGATTTAAAAGCTTTGTTCCAATGCTCTGCTGCTCCACTCTCTCTCGCTCTCTCTCTCTCTCTGATTTTGCTACGAACTGTTTGGATTTGAAGAATCTTGTATCAAATAAGAACCTAAAGAAAGGACAACGAATGAAGTTTAACCATCCCCAGTAGGTTCTTCTTCCAATTTTACTCATTGATTTGGGATAGAGCTTGGATTTAAACCTGGCTAAGTTCGGCTATATGTCGATAGATACATCTTGCACTTGTTTCGAACTTATTCAGCTGCTACTTTTGTTCCATTTTACATCATACTTGATAATTGTCTAAAGATCACAAAAGAAAATGAAAGCAAGAGAAGTGGATAATGTGTAAAAAGAGAAAAGAAAGAAAAGTTATTAGGAGATAATCTATCAAAAAGAAGAAAGGAATATTACATTGGAAAAGCTCACCCCTTTGTATAATTTATACACCTCTTTTCTTAAAATTCCCATCATAGAGAAAGAGCATCAAAGTAGATCCTTCAACCTTGTCTTTACTTTTATGACTTCTCCTTCCTACATGTAATCAATCAAACAACACATGCGATGTTAAAAGACAGGAGAAAAAGTACAAACACCAAATGACATATACTCATTTTC TCGTTTTTGGATCACTTCTATTCTACATCCCTTCTCCACCAAAGAAATGTTGTCCCCCACAAGATAAATCTAAAATTCGTTTAAATTTCTTTTAGAAGAATAACAAATAATAAAAATCATGTTCATCAGGAAGATCCGTCCACTTCCACCCTGTTCTTTTTTTTGTCTATATAAAAAACCCATTTTCCCATTTTTTCAATTAACGAAATCCCCGTAAAATATCGTTTTTTCCCCCTTGATTCTTCTCTCTCAATTGGGTCTCCCCTTTTTCTTCTTCATCCTTCTCTTTTCGCTTCTGGGGGTTTCAAAATCGATCCCACCATTTGATTCCGGTGATATTCCGGCGGCGATATTTTTTTCTGTTGCTGCTGCATTTGTTTACAAGAGACGAAGAGTTTTTGTTGTGTCTTCAAAGTTATTCTAGATGGTTCTTCTCGGTTCCATCTTCTCAATTTGCAGGGATGCAGCTGGGGTAGCTGGGCACATATTTGCTTTTGGGCTTTTCCTGTCACCCTTAGATACATTTAGACGTGTGATCAGAAACAAAACAACAGAACAGTTTTCGTGTTTGCCATACATATATGCTCTGTTAAACTGCCTTATTTGCCTATGGTATGGCACACCCCTCATTTCTCCAAGAAACACGATGGTCATGACGGTCAATTCGATCGGCGCTGTATTTCAGTTAGTCTACATCATGCTCTTCATAACATATGCTGAAAAGGGGAAAAAGATAAAAATGTTAGGATTGTTGCTTGGAATATTTGGCCTTTTCATAGTTATTGTTATTGGGAGCTTACAAATAGCTGACCTCTCTTTGCGACGGAATGTTGTCGGGATTTTGAGTTGTGCTTCTCTCGTATCAATGTTCGCCTCTCCCTTGTTTATTATTAATTTGGTGATTCGAACAAAAAGTGTGGAGTTTATGCCATTTTATCTCTCGCTTTCAACCTTCCTCATGAGCATATCTTTTTTCCTCTATGGACTGTTCAATTACGATCTATTCGTTTATGCCCCAAATGGGATAGGAACTCTGTTGGGGAGTGTTCAATTGGTGTTGTATTGCTACTTCAGTCGAGTTGCTAGAGAGGAGTCTAGAGAACCTCTAATTGTATCCTATGCGTAGATATGTACATTGTGTATTTACATCATGATAATGAGGAACAACAGATTTCCAAGGGTTTGATAATTGGTTCTTCCACAGCATTGGTGTGCAGTTCGTTGTTAGCCAACGAGCCGTTCTCGGGCTACATTGTGTTTTGCTGTAAAATTACCCTCTCCATTAATTTCTCCATTTTGATTGATTGGTTTGTTTTTTCAACCCACCAATCAGTTAAATGGTGTATTTTTAGACAACCAACCCGAAATTCTCAAGAGTGAAGAATGTTGTAATATTTTTTAGCCTTGTGATTTAAAAGCTTTGTTCCAATGCTCTGCTGCTCCActctctctcgctctctctctctctctGATTTTGCTACGAACTGTTTGGATTTGAAGAATCTTGTATCAAATAAGAACCTAAAGAAAGGACAACGAATGAAGTTTAACCATCCCCAGTAGGTTCTTCTTCCAATTTTACTCATTGATTTGGGATAGAGCTTGGATTTAAACCTGGCTAAGTTCGGCTATATGTCGATAGATACATCTTGCACTTGTTTCGAACTTATTCAGCTGCTACTTTTGTTCCATTTTACATCATACTTGATAATTGTCTAAAGATCACAAAAGAAAATGAAAGCAAGAGAAGTGGATAATGTGTAAAAAGAGAAAAGAAAGAAAAGTTATTAGGAGATAATCTATCAAAAAGAAGAAAGGAATATTACATTGGAAAAGCTCACCCCTTTGTATAATTTATACACCTCTTTTCTTAAAATTCCCATCATAGAGAAAGAGCATCAAAGTAGATCCTTCAACCTTGTCTTTACTTTTATGACTTCTCCTTCCTACATGTAATCAATCAAACAACACATGCGATGTTAAAAGACAGGAGAAAAAGTACAAACACCAAATGACATATACTCATTTTC ATGGTTCTTCTCGGTTCCATCTTCTCAATTTGCAGGGATGCAGCTGGGGTAGCTGGGCACATATTTGCTTTTGGGCTTTTCCTGTCACCCTTAGATACATTTAGACGTGTGATCAGAAACAAAACAACAGAACAGTTTTCGTGTTTGCCATACATATATGCTCTGTTAAACTGCCTTATTTGCCTATGGTATGGCACACCCCTCATTTCTCCAAGAAACACGATGGTCATGACGGTCAATTCGATCGGCGCTGTATTTCAGTTAGTCTACATCATGCTCTTCATAACATATGCTGAAAAGGGgAAAAAGATAAAAATGTTAGGATTGTTGCTTGGAATATTTGGCCTTTTCATAGTTATTGTTATTGGGAGCTTACAAATAGCTGACCTCTCTTTGCGACGGAATGTTGTCGGGATTTTGAGTTGTGCTTCTCTCGTATCAATGTTCGCCTCTCCCTTGTTTATTATTAATTTGGTGATTCGAACAAAAAGTGTGGAGTTTATGCCATTTTATCTCTCGCTTTCAACCTTCCTCATGAGCATATCTTTTTtCCTCTATGGACTGTTCAATTACGATCTATTCGTTTATGCCCCAAATGGGATAGGAACTCTGTTGGGGAGTGTTCAATTGGTGTTGTATTGCTACTTCAGTCGAGTTGCTAGAGAGGAGTCTAGAGAACCTCTAATTGTATCCTATGCGTAG MVLLGSIFSICRDAAGVAGHIFAFGLFLSPLDTFRRVIRNKTTEQFSCLPYIYALLNCLICLWYGTPLISPRNTMVMTVNSIGAVFQLVYIMLFITYAEKGKKIKMLGLLLGIFGLFIVIVIGSLQIADLSLRRNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLFVYAPNGIGTLLGSVQLVLYCYFSRVAREESREPLIVSYA*
BLAST of Cucsa.057980.1 vs. Swiss-Prot
Match: SWET2_ARATH (Bidirectional sugar transporter SWEET2 OS=Arabidopsis thaliana GN=SWEET2 PE=1 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 8.3e-88 Identity = 163/225 (72.44%), Postives = 186/225 (82.67%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. Swiss-Prot
Match: SWT2A_ORYSI (Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. indica GN=SWEET2A PE=3 SV=2) HSP 1 Score: 266.5 bits (680), Expect = 2.7e-70 Identity = 136/229 (59.39%), Postives = 174/229 (75.98%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. Swiss-Prot
Match: SWT2A_ORYSJ (Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. japonica GN=SWEET2A PE=2 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 2.7e-70 Identity = 136/229 (59.39%), Postives = 174/229 (75.98%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. Swiss-Prot
Match: SWT2A_SORBI (Bidirectional sugar transporter SWEET2a OS=Sorghum bicolor GN=SWEET2A PE=3 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 5.9e-70 Identity = 131/223 (58.74%), Postives = 170/223 (76.23%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. Swiss-Prot
Match: SWT2B_ORYSI (Bidirectional sugar transporter SWEET2b OS=Oryza sativa subsp. indica GN=SWEET2B PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 4.1e-63 Identity = 124/230 (53.91%), Postives = 171/230 (74.35%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. TrEMBL
Match: A0A0A0L000_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_4G622870 PE=3 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 1.5e-125 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. TrEMBL
Match: M5WK62_PRUPE (Bidirectional sugar transporter SWEET (Fragment) OS=Prunus persica GN=PRUPE_ppa021855mg PE=3 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 3.2e-94 Identity = 168/227 (74.01%), Postives = 198/227 (87.22%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. TrEMBL
Match: A0A061F9Y5_THECC (Bidirectional sugar transporter SWEET OS=Theobroma cacao GN=TCM_032142 PE=3 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 2.9e-92 Identity = 167/231 (72.29%), Postives = 199/231 (86.15%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. TrEMBL
Match: A0A061F9G5_THECC (Bidirectional sugar transporter SWEET OS=Theobroma cacao GN=TCM_032142 PE=3 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 2.9e-92 Identity = 167/231 (72.29%), Postives = 199/231 (86.15%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. TrEMBL
Match: I1MI63_SOYBN (Bidirectional sugar transporter SWEET OS=Glycine max GN=GLYMA_15G211800 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 3.1e-89 Identity = 166/235 (70.64%), Postives = 199/235 (84.68%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. TAIR10
Match: AT3G14770.1 (AT3G14770.1 Nodulin MtN3 family protein) HSP 1 Score: 324.7 bits (831), Expect = 4.7e-89 Identity = 163/225 (72.44%), Postives = 186/225 (82.67%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. TAIR10
Match: AT1G21460.1 (AT1G21460.1 Nodulin MtN3 family protein) HSP 1 Score: 191.8 bits (486), Expect = 4.7e-49 Identity = 97/218 (44.50%), Postives = 139/218 (63.76%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. TAIR10
Match: AT4G10850.1 (AT4G10850.1 Nodulin MtN3 family protein) HSP 1 Score: 160.6 bits (405), Expect = 1.2e-39 Identity = 82/225 (36.44%), Postives = 139/225 (61.78%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. TAIR10
Match: AT5G53190.1 (AT5G53190.1 Nodulin MtN3 family protein) HSP 1 Score: 158.7 bits (400), Expect = 4.4e-39 Identity = 80/205 (39.02%), Postives = 128/205 (62.44%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. TAIR10
Match: AT3G28007.1 (AT3G28007.1 Nodulin MtN3 family protein) HSP 1 Score: 156.4 bits (394), Expect = 2.2e-38 Identity = 77/220 (35.00%), Postives = 135/220 (61.36%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. NCBI nr
Match: gi|778695626|ref|XP_004146078.2| (PREDICTED: bidirectional sugar transporter SWEET2 [Cucumis sativus]) HSP 1 Score: 456.8 bits (1174), Expect = 2.2e-125 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. NCBI nr
Match: gi|595884042|ref|XP_007212900.1| (hypothetical protein PRUPE_ppa021855mg, partial [Prunus persica]) HSP 1 Score: 352.8 bits (904), Expect = 4.5e-94 Identity = 168/227 (74.01%), Postives = 198/227 (87.22%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. NCBI nr
Match: gi|645239895|ref|XP_008226346.1| (PREDICTED: bidirectional sugar transporter SWEET2 [Prunus mume]) HSP 1 Score: 350.1 bits (897), Expect = 2.9e-93 Identity = 167/227 (73.57%), Postives = 197/227 (86.78%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. NCBI nr
Match: gi|590611126|ref|XP_007022013.1| (Nodulin MtN3 family protein isoform 2 [Theobroma cacao]) HSP 1 Score: 346.3 bits (887), Expect = 4.2e-92 Identity = 167/231 (72.29%), Postives = 199/231 (86.15%), Query Frame = 1
BLAST of Cucsa.057980.1 vs. NCBI nr
Match: gi|590611123|ref|XP_007022012.1| (Nodulin MtN3 family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 346.3 bits (887), Expect = 4.2e-92 Identity = 167/231 (72.29%), Postives = 199/231 (86.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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