Cucsa.019340.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.019340.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Short-chain dehydrogenase, putative
Location	scaffold00276 : 183678 .. 185584 (-)
Sequence length	540

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAACCAACTTCCAATAATTCGTCTCCACAGCTGGCCTTGGGTTCTCGTAAGGTGTTGATCACCGGAGTTAGCAAGGGATTAGGAAGAGCCTTAGCGTTGGAGCTGGCTAGCCGTGGCCACACCATCATCGGTTGTTCACGGGATCAAACTAAACTTGATTCTCTTCAGGCTCAGCTTTCTAATCTTTCTTCTACAAACCATTTACTCTACAACGTTGATGTGGTTTGTCATTCTCCTTCTACATATATGATTTTTTCTCGTGTTATTTTATTGATATATTCAAATTTGTTAGATGCCAAAATCCAAATAGGCGTAAAATTAATGTATATTATCTAACCTTCGTATGACAACACTTTGTAAATTTGTATGATGGAGAAAATGAGTGTGACTTTGTTCAATATTTGGTAGAATGACTTGGTTTGTCTAAGGTGACCTGATAGGGTTTCAGAGACATTATGAGATATTTCTCGTCTCACTAGGCTAAGGAGCATGCTTTATTTCAAGTTCTGCTGGTCCTTAGGTTTCACTTAAAGTCAAGGCATGAACAATGCGTCTCATTAGCTATATATTTAGCTACACTCAGCATTTTCGAGCACATTATATTGATTTCGCCCTTAAACTGAGCTAACCCTCTTCAGTAGGCCTAAAATGGATTGAGTCTAGTTGGGTTCTTGGTTTTGTTGACTTTGTCCATATTTTCCTTTAGTTCAGATCAATGTAATCACCATGTAATAACAAAATTGAAAGTGGATTGTGTAGAGATCGAACACCAAGGTTGAGGAGTTTGCACGAGCTACGGTGGAAAATGAATTAGTTCCAAATATCATTGGTATTGGATTTTCAGTTGAATTTGTTTTATAAAACTCACAGCTTGACGTTTGAAAGAAAAAAGGCTAAATGATGATATGGTTGTGTGTGGTGACAGTGAATAATGCAGGTTTGATCAATAGAAGTTGTAAAATATGGGAATTGGATGCACAAGAATTTGATAATGTGATTGATACCAACGTGAAAGGAATAGCAAATATAATGCGTCATTTCATTCCACTTATGATTTCTTCCAACAAAGGCATTATCATCAACATGTCTTCTATTGCTGGGAGAGATGCGCGTGAACTGGTATTCTTTATTATTATTTCAGATTAAACTGCTAAGACTTATACTTTGATTTTTCTCTTTCACCTTATAAATCATTCATAACCATATAGCACAATTTAAAATATGTAGTATAAAAATGGCAACGTAACTTTTAACTATCGAGATGTCAGCAGTTTCACGTGAAAAAACTAAAATGATTCACAATATTTATAAGATAGATGAGCTACTCCTCTCATTTCCAATTCGCTTCGAAATGAAACCTTCGTATATTAAACATGGAAAGAGAGTCCATAAACCCGAAAACCAAGTATATTTTGAGATTTTGTGTGAATTCATACTATTATATGGGCTCCTCCTCCCATTGCTAATTCGATCTAGGATGTGTGAACCCAAAGAGACACCATCTTGAGCGGCATATGTTGACACATTTTGTGTGTCCCACCAACCATACTCACACAATGGTTTTCAAAATTCCAATTCTGCCCTCATTTTCTTTCTCCTTCTTATGCCTTCCCTAACATTCTTTCCTTCGTCACTAGCTTTCCATTCTTTTCTTCCCTTTTCTTATTTTCCAACCTCCTTGACTCAAAAGCTGTGTAGACTTGCTAAACTAGAGATGGTTGATTGCTGCGAGAGAGAGGGAGAGAAGAAGGAGAGAGAATAAAACCTTACCGACGGTAGCTCCTTGCACGACAACGGGGTAGATCGACGAGGTGGAATTGAGAGACAAACTAACAATCGACTGCTCTAGATAGTGGTGGCTAGCAACTATAGCAGGGTTTGGACGGTCGTGGACATTCTAA

mRNA sequence

ATGGCGGAACCAACTTCCAATAATTCGTCTCCACAGCTGGCCTTGGGTTCTCGTAAGGTGTTGATCACCGGAGTTAGCAAGGGATTAGGAAGAGCCTTAGCGTTGGAGCTGGCTAGCCGTGGCCACACCATCATCGGTTGTTCACGGGATCAAACTAAACTTGATTCTCTTCAGGCTCAGCTTTCTAATCTTTCTTCTACAAACCATTTACTCTACAACGTTGATGTGAGATCGAACACCAAGGTTGAGGAGTTTGCACGAGCTACGGTGGAAAATGAATTAGTTCCAAATATCATTGTGAATAATGCAGGTTTGATCAATAGAAGTTGTAAAATATGGGAATTGGATGCACAAGAATTTGATAATGTGATTGATACCAACGTGAAAGGAATAGCAAATATAATGCGTCATTTCATTCCACTTATGATTTCTTCCAACAAAGGCATTATCATCAACATGTCTTCTATTGCTGGGAGAGATGCGCGTGAACTGTGGTGGCTAGCAACTATAGCAGGGTTTGGACGGTCGTGGACATTCTAA

Coding sequence (CDS)

ATGGCGGAACCAACTTCCAATAATTCGTCTCCACAGCTGGCCTTGGGTTCTCGTAAGGTGTTGATCACCGGAGTTAGCAAGGGATTAGGAAGAGCCTTAGCGTTGGAGCTGGCTAGCCGTGGCCACACCATCATCGGTTGTTCACGGGATCAAACTAAACTTGATTCTCTTCAGGCTCAGCTTTCTAATCTTTCTTCTACAAACCATTTACTCTACAACGTTGATGTGAGATCGAACACCAAGGTTGAGGAGTTTGCACGAGCTACGGTGGAAAATGAATTAGTTCCAAATATCATTGTGAATAATGCAGGTTTGATCAATAGAAGTTGTAAAATATGGGAATTGGATGCACAAGAATTTGATAATGTGATTGATACCAACGTGAAAGGAATAGCAAATATAATGCGTCATTTCATTCCACTTATGATTTCTTCCAACAAAGGCATTATCATCAACATGTCTTCTATTGCTGGGAGAGATGCGCGTGAACTGTGGTGGCTAGCAACTATAGCAGGGTTTGGACGGTCGTGGACATTCTAA

Protein sequence

MAEPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSSTNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRDARELWWLATIAGFGRSWTF*

Homology

[Close]

BLAST of Cucsa.019340.1 vs. Swiss-Prot
Match: PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.6e-49
Identity = 102/164 (62.20%), Postives = 127/164 (77.44%), Query Frame = 1


Query: 1   MAEPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQ 60
           MA P S  ++  +A  +R VLITGVSKGLGRALALELA RGHT+IGC+R Q KL +LQ++
Sbjct: 3   MATPFSGAANSIVA--ARTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSE 62

Query: 61  LSNLSSTNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEF 120
           LS  SSTNHLL   DV+SN+ VEE A   VE + VP+IIVNNAG IN++ KIWE+ A++F
Sbjct: 63  LS--SSTNHLLLTADVKSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDF 122

Query: 121 DNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRDAREL 165
           DNV+DTNVKG+AN++RHFIPLM+   +GII+NMSS  GR    L
Sbjct: 123 DNVMDTNVKGVANVLRHFIPLMLPRKQGIIVNMSSGWGRSGAAL 162

[Close]

BLAST of Cucsa.019340.1 vs. Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.6e-14
Identity = 43/143 (30.07%), Postives = 80/143 (55.94%), Query Frame = 1


Query: 17  SRKVLITGVSKGLGRALALELASRGHTI-IGCSRDQTKLDSLQAQLSNLSSTNHLLYNVD 76
           ++  L+TG S+G+GR++AL+LA  G+ + +  +  + K +++  ++             +
Sbjct: 2   NKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIK-AKGVESFAIQAN 61

Query: 77  VRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTNVKGIANIM 136
           V    +V+E  +  V      +++VNNAG I +   +  +  QE+D+VIDTN+KG+ N +
Sbjct: 62  VAKGDEVKEMIKEVVSQFGSVDVLVNNAG-ITKDNLLMRMKEQEWDDVIDTNLKGVFNCI 121

Query: 137 RHFIPLMISSNKGIIINMSSIAG 159
           +   P M+    G IIN++SI G
Sbjct: 122 QKVTPQMLRQRSGAIINLTSIVG 142

[Close]

BLAST of Cucsa.019340.1 vs. Swiss-Prot
Match: Y1430_HAEIN (Probable NADP-dependent dehydrogenase HI_1430 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1430 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.6e-14
Identity = 48/138 (34.78%), Postives = 71/138 (51.45%), Query Frame = 1


Query: 21  LITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSSTNHLLYNVDVRSNT 80
           L+TG + G G A+  +L   G+ +IG  R   +L  + +QL N    N L    D+R   
Sbjct: 7   LVTGATAGFGLAICKKLIEAGYKVIGTGRRADRLAEIHSQLGN----NFLPLAFDIRDEQ 66

Query: 81  KVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTNVKGIANIMRHFIP 140
                     E     +++VNNAGL        + D Q++  +IDTN+KG+  I R  +P
Sbjct: 67  ATINALNTLPEGWQAVDLLVNNAGLALGLEPAHKADLQDWYQMIDTNIKGLVTITRLVLP 126

Query: 141 LMISSNKGIIINMSSIAG 159
            M++ N G IIN+SSIAG
Sbjct: 127 NMVARNYGQIINLSSIAG 140

[Close]

BLAST of Cucsa.019340.1 vs. Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.6e-14
Identity = 43/143 (30.07%), Postives = 80/143 (55.94%), Query Frame = 1


Query: 17  SRKVLITGVSKGLGRALALELASRGHTI-IGCSRDQTKLDSLQAQLSNLSSTNHLLYNVD 76
           ++  L+TG S+G+GR++AL+LA  G+ + +  +  + K +++  ++             +
Sbjct: 2   NKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIK-AKGVESFAIQAN 61

Query: 77  VRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTNVKGIANIM 136
           V    +V+E  +  V      +++VNNAG I +   +  +  QE+D+VIDTN+KG+ N +
Sbjct: 62  VAKGDEVKEMIKEVVSQFGSVDVLVNNAG-ITKDNLLMRMKEQEWDDVIDTNLKGVFNCI 121

Query: 137 RHFIPLMISSNKGIIINMSSIAG 159
           +   P M+    G IIN++SI G
Sbjct: 122 QKVTPQMLRQRSGAIINLTSIVG 142

[Close]

BLAST of Cucsa.019340.1 vs. Swiss-Prot
Match: Y2049_STAEQ (Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.1e-14
Identity = 39/138 (28.26%), Postives = 87/138 (63.04%), Query Frame = 1


Query: 21  LITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSSTNHLLYNVDVRSNT 80
           ++TG S G+G A+A +L+ +G +I+   R++ +L+ +  QL+    T   + + DV   +
Sbjct: 10  VVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQQLN----TPAKVVSADVTVKS 69

Query: 81  KVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTNVKGIANIMRHFIP 140
            +++  +A +++    +I+VN+AG  + S KI + + +++D +ID N+KG  ++++  +P
Sbjct: 70  NIDDMLKAVIDHFGHIDIVVNSAGQ-SLSSKITDYNVEQWDTMIDVNIKGTLHVLQATLP 129

Query: 141 LMISSNKGIIINMSSIAG 159
            ++  + G IIN++S++G
Sbjct: 130 YLLKQSSGHIINLASVSG 142

[Close]

BLAST of Cucsa.019340.1 vs. TrEMBL
Match: A0A0A0KMF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002570 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.5e-53
Identity = 107/146 (73.29%), Postives = 123/146 (84.25%), Query Frame = 1


Query: 18  RKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSSTNHLLYNVDVR 77
           RKVLITGVSKGLGRALALELA+RGHTIIGCSRDQ KLDSLQ QLS  S   H  + +DV+
Sbjct: 25  RKVLITGVSKGLGRALALELANRGHTIIGCSRDQVKLDSLQQQLSTTSLNQHFFFKLDVK 84

Query: 78  SNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTNVKGIANIMRH 137
           S+  V+EFA+   +N LVP+I+VNNAGL ++S KIWELDA+EFDNVIDTNVKGIANI+RH
Sbjct: 85  SDNNVQEFAQFVAKNNLVPHILVNNAGLAHKSAKIWELDAEEFDNVIDTNVKGIANILRH 144

Query: 138 FIPLMISSNKGIIINMSSIAGRDARE 164
           FIPLMI +N GII+NMSS AGR A E
Sbjct: 145 FIPLMIQNNNGIIVNMSSGAGRSAHE 170

[Close]

BLAST of Cucsa.019340.1 vs. TrEMBL
Match: A0A0A0LW25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570200 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.0e-53
Identity = 107/161 (66.46%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 1   MAEPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQ 60
           MA  T++ +S  +A  S+KVLITGVSKG+GRALALELA+ GHT+IGCSRDQTKLDSLQ Q
Sbjct: 1   MATTTTDKASSTMAAVSKKVLITGVSKGIGRALALELATYGHTVIGCSRDQTKLDSLQLQ 60

Query: 61  LSNLSS-TNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQE 120
           LS +S   NHLL +VDV+ N  VEEFAR  VENELVP+IIVNNAG++N+   +WE+D Q+
Sbjct: 61  LSKVSPIVNHLLLSVDVKCNRSVEEFARTVVENELVPDIIVNNAGVVNKVGNMWEIDVQD 120

Query: 121 FDNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRD 161
           FD VID N+KG +NI+RHFIPLMI  N+GII+N+SS+ GRD
Sbjct: 121 FDTVIDINIKGTSNILRHFIPLMIPHNQGIIVNISSLCGRD 161

[Close]

BLAST of Cucsa.019340.1 vs. TrEMBL
Match: A0A0A0LYI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570190 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 6.0e-53
Identity = 106/161 (65.84%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 1   MAEPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQ 60
           MA  T++ +S  +   S+KVLITGVS+GLGRALALELA+ GHT+IGCSRDQTKLDSLQ Q
Sbjct: 1   MAPTTTDKASSTMVAVSKKVLITGVSRGLGRALALELATYGHTVIGCSRDQTKLDSLQLQ 60

Query: 61  LSNLS-STNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQE 120
           LS +S + NHLL ++DV+ N  VEEFAR  +ENEL+P+IIVNNAG+ N+   +WE+D Q+
Sbjct: 61  LSKVSPNANHLLLSIDVKCNRSVEEFARTVMENELIPDIIVNNAGVANKRSNMWEIDVQD 120

Query: 121 FDNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRD 161
           FDNVIDTN+KG  NI+RHFIPLMI  N+GII+N+SS AGRD
Sbjct: 121 FDNVIDTNIKGTTNILRHFIPLMIPYNQGIIVNISSDAGRD 161

[Close]

BLAST of Cucsa.019340.1 vs. TrEMBL
Match: B9SPD4_RICCO (Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.5e-46
Identity = 96/149 (64.43%), Postives = 120/149 (80.54%), Query Frame = 1


Query: 16  GSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSSTNHLLYNVD 75
           G +KV+ITGVSKGLGRALALELA RGHT+IGCSR Q KL+SLQ++L +  + +HLL N D
Sbjct: 24  GGKKVMITGVSKGLGRALALELAKRGHTVIGCSRAQDKLNSLQSELPSDHNNHHLLLNAD 83

Query: 76  VRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTNVKGIANIM 135
           V SN+ VEE A+A +E + VP+IIVNNAG IN++ KIWE+  +EFD VIDTNVKGIAN++
Sbjct: 84  VSSNSSVEELAKAIMEKKGVPDIIVNNAGTINKNNKIWEVPVEEFDTVIDTNVKGIANVL 143

Query: 136 RHFIPLMISSNKGIIINMSSIAGRDAREL 165
           RHFIPLM+ + +GII+NMSS  GR    L
Sbjct: 144 RHFIPLMLPNKQGIIVNMSSGWGRSGAAL 172

[Close]

BLAST of Cucsa.019340.1 vs. TrEMBL
Match: A0A067LDB8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00292 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.5e-46
Identity = 94/147 (63.95%), Postives = 121/147 (82.31%), Query Frame = 1


Query: 18  RKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSSTNHLLYNVDVR 77
           + V++TGVSKGLGRALALELA RGHT+IGCSR Q KL+SLQ++L++  + +HLL NVDVR
Sbjct: 13  KTVMVTGVSKGLGRALALELAKRGHTVIGCSRAQDKLNSLQSELTSDRNDHHLLLNVDVR 72

Query: 78  SNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTNVKGIANIMRH 137
           SN+ VEE A+A +E + VP+IIVNNAG INR+ K+WE+  +EFD VIDTNVKG+AN++RH
Sbjct: 73  SNSSVEELAKAVMEKKGVPDIIVNNAGTINRNNKLWEVPVEEFDTVIDTNVKGVANVLRH 132

Query: 138 FIPLMISSNKGIIINMSSIAGRDAREL 165
           FIPLM+ + +GII+NMSS  GR    L
Sbjct: 133 FIPLMLPNKRGIIVNMSSGWGRSGAAL 159

[Close]

BLAST of Cucsa.019340.1 vs. TAIR10
Match: AT1G10310.1 (AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 194.9 bits (494), Expect = 4.3e-50
Identity = 102/164 (62.20%), Postives = 127/164 (77.44%), Query Frame = 1


Query: 1   MAEPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQ 60
           MA P S  ++  +A  +R VLITGVSKGLGRALALELA RGHT+IGC+R Q KL +LQ++
Sbjct: 3   MATPFSGAANSIVA--ARTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSE 62

Query: 61  LSNLSSTNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEF 120
           LS  SSTNHLL   DV+SN+ VEE A   VE + VP+IIVNNAG IN++ KIWE+ A++F
Sbjct: 63  LS--SSTNHLLLTADVKSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDF 122

Query: 121 DNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRDAREL 165
           DNV+DTNVKG+AN++RHFIPLM+   +GII+NMSS  GR    L
Sbjct: 123 DNVMDTNVKGVANVLRHFIPLMLPRKQGIIVNMSSGWGRSGAAL 162

[Close]

BLAST of Cucsa.019340.1 vs. TAIR10
Match: AT3G55290.1 (AT3G55290.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14
Identity = 50/152 (32.89%), Postives = 83/152 (54.61%), Query Frame = 1


Query: 11  PQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSST--N 70
           P   L  + VL+TG S G+GR + L+LA  G  +I  +R   +L+SL +++++ SST   
Sbjct: 14  PWCELKDKVVLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSSTGIQ 73

Query: 71  HLLYNVDVRSN-TKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTN 130
                +DV S+   +++  R   +     + ++NNAG+        +L   E+DNV  TN
Sbjct: 74  AAALELDVSSDAATIQKAVREAWDIFGKIDALINNAGIRGNVKSSLDLSEDEWDNVFKTN 133

Query: 131 VKGIANIMRHFIPLMISSNK-GIIINMSSIAG 159
           +KG   + +H   LM  + + G +IN+SSIAG
Sbjct: 134 LKGPWLVSKHVCMLMRDAKRGGSVINISSIAG 165

[Close]

BLAST of Cucsa.019340.1 vs. TAIR10
Match: AT3G55310.1 (AT3G55310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-13
Identity = 48/152 (31.58%), Postives = 84/152 (55.26%), Query Frame = 1


Query: 11  PQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSST--N 70
           P   L  + VL+TG S G+GR + L+LA  G  +I  +R   +L+SL +++++ SST   
Sbjct: 13  PWCELKDKVVLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSSTGIQ 72

Query: 71  HLLYNVDVRSN-TKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTN 130
                +DV S+   +++  R   +     + ++NNAG+        +L   E+DNV +TN
Sbjct: 73  AAALELDVSSDAATIQKAVREAWDIFGKIDALINNAGIRGNVKLSLDLSEDEWDNVFNTN 132

Query: 131 VKGIANIMRHFIPLMISSNK-GIIINMSSIAG 159
           +KG   + ++   LM  + + G +IN+SS+AG
Sbjct: 133 LKGPWLVAKYVCVLMRDAKRGGSVINISSVAG 164

[Close]

BLAST of Cucsa.019340.1 vs. TAIR10
Match: AT3G51680.1 (AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 6.0e-12
Identity = 51/161 (31.68%), Postives = 80/161 (49.69%), Query Frame = 1


Query: 3   EPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLS 62
           E T+    P+  L  +  +ITG + G+G+A  +  A  G T++    D     SL   LS
Sbjct: 21  EETNTTLYPK-RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLS 80

Query: 63  NLSSTNHLLY-NVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCK---IWELDAQ 122
           +  ++  + + + DV     VE     TV      +I+ NNAG++    K   I + DA 
Sbjct: 81  SHKTSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDAD 140

Query: 123 EFDNVIDTNVKGIANIMRHFIPLMISSN-KGIIINMSSIAG 159
           EFD+V+  NV+G+   M+H    MI    KG II+ +S+AG
Sbjct: 141 EFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAG 180

[Close]

BLAST of Cucsa.019340.1 vs. TAIR10
Match: AT3G46170.1 (AT3G46170.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 3.9e-11
Identity = 47/152 (30.92%), Postives = 80/152 (52.63%), Query Frame = 1


Query: 11  PQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSST--N 70
           P   L  + VL+TG S G+GR + L+L   G  II  +R   +L+SL +++++ SST   
Sbjct: 22  PWCELKDKVVLVTGASSGIGREICLDLGKAGCKIIAVARRVDRLNSLCSEINSSSSTGIQ 81

Query: 71  HLLYNVDVRSN-TKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTN 130
                +DV S+   +++  +         + ++NNAG+        +L  +E+DNV  TN
Sbjct: 82  AAALKLDVTSDAATIQKVVQGAWGIFGKIDALINNAGIRGNVKSSLDLSKEEWDNVFKTN 141

Query: 131 VKGIANIMRHFIPLMISSN-KGIIINMSSIAG 159
           + G   + ++   LM  +   G +IN+SSIAG
Sbjct: 142 LTGPWLVSKYVCVLMRDAKLGGSVINISSIAG 173

[Close]

BLAST of Cucsa.019340.1 vs. NCBI nr
Match: gi|449462820|ref|XP_004149138.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 7.3e-84
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


Query: 1   MAEPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQ 60
           MAEPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQ
Sbjct: 1   MAEPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQ 60

Query: 61  LSNLSSTNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEF 120
           LSNLSSTNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEF
Sbjct: 61  LSNLSSTNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEF 120

Query: 121 DNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRDAREL 165
           DNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRDAREL
Sbjct: 121 DNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRDAREL 164

[Close]

BLAST of Cucsa.019340.1 vs. NCBI nr
Match: gi|659129579|ref|XP_008464744.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like [Cucumis melo])

HSP 1 Score: 285.4 bits (729), Expect = 6.8e-74
Identity = 148/165 (89.70%), Postives = 157/165 (95.15%), Query Frame = 1


Query: 1   MAE-PTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQA 60
           MAE P+SN SSPQ+ LGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQA
Sbjct: 1   MAELPSSNESSPQVGLGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQA 60

Query: 61  QLSNLSSTNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQE 120
           QLSNLSST HLL N+DVRSNT+VEEFARATVENELVPNIIVNNAGLINR+ K+WELDA E
Sbjct: 61  QLSNLSSTKHLLCNLDVRSNTEVEEFARATVENELVPNIIVNNAGLINRNGKMWELDAHE 120

Query: 121 FDNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRDAREL 165
           FDNVIDTNVKGIAN+MRHFIPLMISSNKGIIINMSS+AGRD+ EL
Sbjct: 121 FDNVIDTNVKGIANVMRHFIPLMISSNKGIIINMSSMAGRDSHEL 165

[Close]

BLAST of Cucsa.019340.1 vs. NCBI nr
Match: gi|449462804|ref|XP_004149130.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 5.1e-53
Identity = 107/146 (73.29%), Postives = 123/146 (84.25%), Query Frame = 1


Query: 18  RKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQLSNLSSTNHLLYNVDVR 77
           RKVLITGVSKGLGRALALELA+RGHTIIGCSRDQ KLDSLQ QLS  S   H  + +DV+
Sbjct: 25  RKVLITGVSKGLGRALALELANRGHTIIGCSRDQVKLDSLQQQLSTTSLNQHFFFKLDVK 84

Query: 78  SNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTNVKGIANIMRH 137
           S+  V+EFA+   +N LVP+I+VNNAGL ++S KIWELDA+EFDNVIDTNVKGIANI+RH
Sbjct: 85  SDNNVQEFAQFVAKNNLVPHILVNNAGLAHKSAKIWELDAEEFDNVIDTNVKGIANILRH 144

Query: 138 FIPLMISSNKGIIINMSSIAGRDARE 164
           FIPLMI +N GII+NMSS AGR A E
Sbjct: 145 FIPLMIQNNNGIIVNMSSGAGRSAHE 170

[Close]

BLAST of Cucsa.019340.1 vs. NCBI nr
Match: gi|778665305|ref|XP_011648535.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 8.7e-53
Identity = 107/161 (66.46%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 1   MAEPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQ 60
           MA  T++ +S  +A  S+KVLITGVSKG+GRALALELA+ GHT+IGCSRDQTKLDSLQ Q
Sbjct: 1   MATTTTDKASSTMAAVSKKVLITGVSKGIGRALALELATYGHTVIGCSRDQTKLDSLQLQ 60

Query: 61  LSNLSS-TNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQE 120
           LS +S   NHLL +VDV+ N  VEEFAR  VENELVP+IIVNNAG++N+   +WE+D Q+
Sbjct: 61  LSKVSPIVNHLLLSVDVKCNRSVEEFARTVVENELVPDIIVNNAGVVNKVGNMWEIDVQD 120

Query: 121 FDNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRD 161
           FD VID N+KG +NI+RHFIPLMI  N+GII+N+SS+ GRD
Sbjct: 121 FDTVIDINIKGTSNILRHFIPLMIPHNQGIIVNISSLCGRD 161

[Close]

BLAST of Cucsa.019340.1 vs. NCBI nr
Match: gi|700210998|gb|KGN66094.1| (hypothetical protein Csa_1G570190 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 8.7e-53
Identity = 106/161 (65.84%), Postives = 132/161 (81.99%), Query Frame = 1


Query: 1   MAEPTSNNSSPQLALGSRKVLITGVSKGLGRALALELASRGHTIIGCSRDQTKLDSLQAQ 60
           MA  T++ +S  +   S+KVLITGVS+GLGRALALELA+ GHT+IGCSRDQTKLDSLQ Q
Sbjct: 1   MAPTTTDKASSTMVAVSKKVLITGVSRGLGRALALELATYGHTVIGCSRDQTKLDSLQLQ 60

Query: 61  LSNLS-STNHLLYNVDVRSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQE 120
           LS +S + NHLL ++DV+ N  VEEFAR  +ENEL+P+IIVNNAG+ N+   +WE+D Q+
Sbjct: 61  LSKVSPNANHLLLSIDVKCNRSVEEFARTVMENELIPDIIVNNAGVANKRSNMWEIDVQD 120

Query: 121 FDNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRD 161
           FDNVIDTN+KG  NI+RHFIPLMI  N+GII+N+SS AGRD
Sbjct: 121 FDNVIDTNIKGTTNILRHFIPLMIPYNQGIIVNISSDAGRD 161

The following BLAST results are available for this feature:

BLAST of Cucsa.019340.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTALR_ARATH	7.6e-49	62.20	NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 P...	[more]
FABG_STAEQ	3.6e-14	30.07	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s...	[more]
Y1430_HAEIN	3.6e-14	34.78	Probable NADP-dependent dehydrogenase HI_1430 OS=Haemophilus influenzae (strain ...	[more]
FABG_STAES	3.6e-14	30.07	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s...	[more]
Y2049_STAEQ	6.1e-14	28.26	Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain AT...	[more]

BLAST of Cucsa.019340.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMF3_CUCSA	3.5e-53	73.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002570 PE=3 SV=1	[more]
A0A0A0LW25_CUCSA	6.0e-53	66.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570200 PE=3 SV=1	[more]
A0A0A0LYI3_CUCSA	6.0e-53	65.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570190 PE=3 SV=1	[more]
B9SPD4_RICCO	2.5e-46	64.43	Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=...	[more]
A0A067LDB8_JATCU	2.5e-46	63.95	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00292 PE=3 SV=1	[more]

BLAST of Cucsa.019340.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10310.1	4.3e-50	62.20	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G55290.1	3.8e-14	32.89	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G55310.1	2.5e-13	31.58	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G51680.1	6.0e-12	31.68	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G46170.1	3.9e-11	30.92	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Cucsa.019340.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462820\|ref\|XP_004149138.1\|	7.3e-84	100.00	PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus]	[more]
gi\|659129579\|ref\|XP_008464744.1\|	6.8e-74	89.70	PREDICTED: uncharacterized oxidoreductase YMR226C-like [Cucumis melo]	[more]
gi\|449462804\|ref\|XP_004149130.1\|	5.1e-53	73.29	PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus]	[more]
gi\|778665305\|ref\|XP_011648535.1\|	8.7e-53	66.46	PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus]	[more]
gi\|700210998\|gb\|KGN66094.1\|	8.7e-53	65.84	hypothetical protein Csa_1G570190 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR016040	NAD(P)-bd_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042967	acyl-carrier-protein biosynthetic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006760	folic acid-containing compound metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005835	fatty acid synthase complex
molecular_function	GO:0004316	3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.019340	Cucsa.019340	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.019340.1	Cucsa.019340.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.019340.1.CDS.4	Cucsa.019340.1.CDS.4	CDS
Cucsa.019340.1.CDS.3	Cucsa.019340.1.CDS.3	CDS
Cucsa.019340.1.CDS.2	Cucsa.019340.1.CDS.2	CDS
Cucsa.019340.1.CDS.1	Cucsa.019340.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 19..36 score: 4.2E-12coord: 94..105 score: 4.2E-12coord: 142..158 score: 4.2
IPR002347	Short-chain dehydrogenase/reductase SDR	PANTHER	PTHR24322	FAMILY NOT NAMED	coord: 22..152 score: 8.4
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 19..163 score: 1.1
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 5..161 score: 6.1
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 15..162 score: 8.89
None	No IPR available	PANTHER	PTHR24322:SF500	SUBFAMILY NOT NAMED	coord: 22..152 score: 8.4