Cucsa.019310.3 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.019310.3
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Serine--tRNA ligase
Location	scaffold00276 : 131848 .. 136544 (+)
Sequence length	1477

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGGGGTCTGGTTCTGAACCACTTGGATTCTCATCGGCTAATGCGTAATGGTATATTTTCATGTTTTAGGGTTTTGTAGGTTAAAGTTTTCTCACTCTAAATTGCAGTTTTTGGAAGGGAAATCTCAGACGCAGATAGACAAAGATGTTGGACATCAATTTGTTCAGAGAAGAGAAAGGCAACAATCCTGAAATCATCCGTGAGTCTCAACGCCGCCGATTTGCCAACGTTGAACTCGTTGATGAAGTCATTAAGCTTGATAAAGAATGGCGTCAACGTAATCCTCCATCTTTtATCCTCTACTATTTCATTTCTATCGCTTTTTCTTACTTCGTTTTGTTTTtCTTTTCTTTTTTCTTTTTTtGGTATTGGAATTGGTATTTGTTTAGGCCAATTTGAGCTGGAGAATCTCAGAAAGGAGTTCAACAAGATCAACAAGCAAATTGCTCAGCTTAGAATAGTAATTCATCTATCGATCTTTCTTCTTTCACGTTGCAGGAAATTGTCTTAGGAGCTAATGTTAGTTTCATAATTCATGCAACTGTTAGTCCCTATTACGGGATTTAAGTTGTATGCTGTTAGACCTCCTATAAACTATACGTATAACTGGATAGTGGAATGTTAATATTTGTTTGTACGGATAGTGGGGGGCCGGACCAGAGGAGGTTTAAGAAAGGTTCCTGAGTGCAGGAACTGTACTTAGATATCTAACATGTCTTGTGAAGGTTTTGGTTTTGGTTCAGTTTCCATTGTTCCGTTGTTTACTTGGTAAATTTTGGAAATGAAGGCTGGTGAGGATGCGTCCGAGAGGATTAAAGACACTGAAGAAAaTAAAAAGTTGTCTGCTGAGAAAGATGTTGAAGCTAAGGATGTGTTAAAGAAGTTGAACTCAAAACTGGAAATAATTGGAAACCTTGTGCATGATTCCGTTCCCGTCAGCAATGATGAGGTATGATATTTGGCATCACTGCATTTGTTTTATTCTTTGTAGTGCTTTACTTTCTTAACAATGCAAGCAACTTTTTGTAGGCTAATAATGTTGTTATCAGATCGTGGGGTGAGAAACTAGTAAAACCGAAACTGAAGAATCATGTTGATCTTGTTGAGCTTCTTGAAATTGCAGATTCTAAAAGAGGTAATAAAGTATAGAAATTTTACTCTGATCAGTTGAGATATGCACAAATTTCTTATCATAGCTTCTTAATAACCTCCCAAATTTTCCCACTAAGCTTGTCACTGCTATCATAGGTAAACTCACAATCCAATCCTGAATTCGTCTTCACCCTCCTCTGCTTTCTTTTTATCTCCCTCTACATCTTTTCCCCCAACATCCTTCCTTAAAGCCAGAGAATAATTCAACGGACTCTTTGGTAAAACCCATTTCCTACCTGATAAGTTAGATACAGAGAAAGAAAAAAGTCTAGAAATTTCCTTCTGTTCCGGTATAAACATTTGTGACCTTTTCCCCTTAAAGGATTTGGAAAAACTATAGCGCAGCGACATCCGTGTCCATTGGCACTCTATTGGAGTGAAAAAGAACTTCCTATTCACGATATTTCAGTGGGTAACTCATCACTGCAACCAAACTATCTCTTACGCACGGTGAAGTACCTAGCTTCTTGTTCTAACTTAACAACCTCTGGACCTGTGTTCCTATATGACTACTCTTTTTCCATTTCCACTATTTTGGAGTGAAAAAAACTTTCTATTCACTGTAACCTTTCCCATCATATTCTCATTTTAGAGAGGAGAGAAAAACTAAGCAACATGATTGTTAAGCAATCAGCTTCGTACATGATAAGAGGACATTATGGTTGTTGATTATTAGAGCTTTCGGAGATTAGTGAATCACAAGGAGCCACCAAACTTGCAATGACATTCTCACTTCTAATAGTTTATATACCTTTAGCTCCTGATGTTTTCTCTGGTATATATCGTCTCATCAAATTAAATTCCCAAATTTCACATTTTTCACTGCTATGGAATCCATCCAGTTTATGCCTTCTATATTCCCATTGAAAATTTAAAAGATACAGAACATTATGCTAATTTCAACTTTATGGAAATATTTAGGTTCTGAAATAGCAGGAGGTAGAGGCTACTATCTAAAAGGAGCTGGTGTGCGTTTGAATCAAGCTTTGATAAACTATGGCCTTGACTTTTTGGAGAAAAGGGGTTATACAGAACTGCAGACTCCTTTCTTCATGAGAAAAGATATCATGGCTAGATGTGCTCAATTGGCACAATTTGACGAAGAACTTTATAAGGTCTGTTATTAATGTTTTGACAGGATCTATTGGAATTTAAATCCCAATGGTTCTGAAATGAATTCGTTCCTTCTTTAAATAAAAGGATATTGATTTCAAATATTGTTGGATGTGTGTGTGTATGTGTGTATAGGAATTAACAGGATTTCAAATTCAAATACTAATTACGATTTTTTCCTTTTCATTTCTAGTAATCATTTGAACAATTTTATCCAAATTTATTTCAAATTCTTCTCATTCCAAACAAAACAAATTAAAGATAATTCATAAAGTTTCAAATCATGTGATAATCCCTTTTTATACTTCTTTGATCCCAAACAAATCTTGATGACTTTCTTATGTGGAAAGTAAGTTTTTATTTGTAGTCTTGCATTTCAAAATAAGGATCTTGGTCCATTAGTGAACCGTTTTTTTtGTTGTGTTTGGGCTGTGGAAGATTGCCAAAATATGATCATGAATTCATTGGTGTTCATTAGGTTACTGGTGAGGGTGATGATAAATATCTAATTGCCACCGCTGAACAACCACTTTGTTCATATCATCTTGAAGATTGGATTCATCCTTCTCAATTGCCTATAAGGTTTCTACATCTTACTAAAAATTGTCCACCTCTAGCACCCTATGAAAGCATTTTATTTTAATTCACTATTATTAATGCACCAAATAGGTACGCTGGATATTCATCTTGCTTTCGTAAAGAAGCAGGTTCCCATGGCCGAGATACTCTTGGAATCTTCCGAGTCCACCAATTCGAGAAAGTAGAGCAATTTTGTATCACCAGCCCTAACGACAATGATTCGTGGGACATGCATGAAGAGATGATAAAAAATTCCGAGGAATTCTACAAGACGGTAGCTTCTATACCTTGTATTGATGATTTTTCTGTTCAACAATTATAATTCCAAATCAGTAATCCGATATTTAGGCAATTTTATGAAACATTTGGCTAGAGAGGAAGTGTTATTTCTATACCCTGTAAGTGTTATTTTTTtATCTTTAGGATTTTtCTTTTTAATACTTTAAAAAaTATTATCTATGAGCTCCTGTTCTTTGGATTGGAGCCTTTTTGGTTTTGGTTTTGGTTTTGGTTTTGATTTGGTGCTTATCTATTTGCTCTTGGAATCTATATTTCTTTTGAACTTTGGGCTTTAGGATCTCTCATCTTGTATCCCCTTTTGTTTTATTGTATTCCATCGTTTTCTTCTCTGTGGAAGCTTGGTTTTCCATTAACAAAACAATATTAGTGGTAGTAATTTTGTCTGATGTGAGATCTTATGTTTTGGCAGTTAAATATCCCATACCAAGTTGTGGCTATAGTTTCTGGTGCATTAAATGATGCAGCTGCCAAGAAATATGACTTAGAAGCATGGTTTCCTGCATCTCAGACTTACAGAGAGTTAGTATCATGTTCTAATTGCACTGACTATCAGTCCAGAAGGTTAGAGATTCGATACGGTCAGAAAAAGGTAAGTTCTTCATTACTTCTGAATTATTGAAGAATATGATTTGCATTGAGATTGTTGAACTTGGAAGTGCTAACAGCTAACAGGCTTCTAATAGGGTAGTCATTGATTTTTATAAATTAATTTATGTCTATTATCCTGGCATTCTTGTAACTTCTCAATGAAATTGGGTGGGTTAAATTATAAGCTTGGTCCTGAATTTTCACGGTTATATGTTAATTTATTGTATTTTCTGCCTCTAAGAATTTAATGCTTAGACCACACCGTATCTAAACCTGATTTAAGCCTGGTTATTTTTGAAAGCTGTCTATTTCATTGAAAAAAGTTTGGTTCTCATGCCACAAAATATCTAAACCACTCTGAATTCAACTCTGCATTAAACACTTGACACTGAGCAGTTGAGACATACCGTCAAAGTGGTTAAGTACTTAATTGATACTGTTAACAACATAGACCTATTAGACACAACATTCAAATTGATTGGTTGAGGGAATAATTAAAAAAAaTTTCAAGTACTAGGATTAGATGGACAAACTTGCAAGTTTGAAGGGTTTATGATAAACTTTGTAAAGTATGCAACCACTAAATAGACACAACCTTGCAAGTTAGTTGGGGGGTTATTATAAACTTTTGAAGGACACCACATTATTACTTTCCTTTTTAATTTCATAGTGTTCAACTGCTATTTTGTTTTGATGGTGCAACTGCAGAGCAACGAGCAGACGAAACAATATGTGCATTTGCTAAATTCTACACTCACCGCAACAGAAAGGACTCTATGCTGCATTCTTGAGAACTACCAAAAAGAaGATGGGGTTGAAGTACCTGAAGTTCTACGACCATATTTGGGTGGAAAGGCATTTCTACCCTTCAAAACAAAACCGACAGGGAGCGATTCCAAAGGGAAGAAATCGAAGGCCTAATTGTGTACTTTTCTTTTCTCTCCCTTTGAATTATTAAATCTTC

mRNA sequence

GGTGGGGTCTGGTTCTGAACCACTTGGATTCTCATCGGCTAATGCGTAATGGTATATTTTCATGTTTTAGGGTTTTGTAGGTTAAAGTTTTCTCACTCTAAATTGCAGTTTTTGGAAGGGAAATCTCAGACGCAGATAGACAAAGATGTTGGACATCAATTTGTTCAGAGAAGAGAAAGGCAACAATCCTGAAATCATCCGTGAGTCTCAACGCCGCCGATTTGCCAACGTTGAACTCGTTGATGAAGTCATTAAGCTTGATAAAGAATGGCGTCAACGCCAATTTGAGCTGGAGAATCTCAGAAAGGAGTTCAACAAGATCAACAAGCAAATTGCTCAGCTTAGAATAGCTGGTGAGGATGCGTCCGAGAGGATTAAAGACACTGAAGAAAATAAAAAGTTGTCTGCTGAGAAAGATGTTGAAGCTAAGGATGTGTTAAAGAAGTTGAACTCAAAACTGGAAATAATTGGAAACCTTGTGCATGATTCCGTTCCCGTCAGCAATGATGAGGCTAATAATGTTGTTATCAGATCGTGGGGTGAGAAACTAGTAAAACCGAAACTGAAGAATCATGTTGATCTTGTTGAGCTTCTTGAAATTGCAGATTCTAAAAGAGGTTCTGAAATAGCAGGAGGTAGAGGCTACTATCTAAAAGGAGCTGGTGTGCGTTTGAATCAAGCTTTGATAAACTATGGCCTTGACTTTTTGGAGAAAAGGGGTTATACAGAACTGCAGACTCCTTTCTTCATGAGAAAAGATATCATGGCTAGATGTGCTCAATTGGCACAATTTGACGAAGAACTTTATAAGGTTACTGGTGAGGGTGATGATAAATATCTAATTGCCACCGCTGAACAACCACTTTGTTCATATCATCTTGAAGATTGGATTCATCCTTCTCAATTGCCTATAAGGTACGCTGGATATTCATCTTGCTTTCGTAAAGAAGCAGGTTCCCATGGCCGAGATACTCTTGGAATCTTCCGAGTCCACCAATTCGAGAAAGTAGAGCAATTTTGTATCACCAGCCCTAACGACAATGATTCGTGGGACATGCATGAAGAGATGATAAAAAATTCCGAGGAATTCTACAAGACGTTAAATATCCCATACCAAGTTGTGGCTATAGTTTCTGGTGCATTAAATGATGCAGCTGCCAAGAAATATGACTTAGAAGCATGGTTTCCTGCATCTCAGACTTACAGAGAGTTAGTATCATGTTCTAATTGCACTGACTATCAGTCCAGAAGGTTAGAGATTCGATACGGTCAGAAAAAGAAAGGACTCTATGCTGCATTCTTGAGAACTACCAAAAAGAAGATGGGGTTGAAGTACCTGAAGTTCTACGACCATATTTGGGTGGAAAGGCATTTCTACCCTTCAAAACAAAACCGACAGGGAGCGATTCCAAAGGGAAGAAATCGAAGGCCTAATTGTGTACTTTTCTTTTCTCTCCCTTTGAATTATTAAATCTTC

Coding sequence (CDS)

ATGTTGGACATCAATTTGTTCAGAGAAGAGAAAGGCAACAATCCTGAAATCATCCGTGAGTCTCAACGCCGCCGATTTGCCAACGTTGAACTCGTTGATGAAGTCATTAAGCTTGATAAAGAATGGCGTCAACGCCAATTTGAGCTGGAGAATCTCAGAAAGGAGTTCAACAAGATCAACAAGCAAATTGCTCAGCTTAGAATAGCTGGTGAGGATGCGTCCGAGAGGATTAAAGACACTGAAGAAAaTAAAAAGTTGTCTGCTGAGAAAGATGTTGAAGCTAAGGATGTGTTAAAGAAGTTGAACTCAAAACTGGAAATAATTGGAAACCTTGTGCATGATTCCGTTCCCGTCAGCAATGATGAGGCTAATAATGTTGTTATCAGATCGTGGGGTGAGAAACTAGTAAAACCGAAACTGAAGAATCATGTTGATCTTGTTGAGCTTCTTGAAATTGCAGATTCTAAAAGAGGTTCTGAAATAGCAGGAGGTAGAGGCTACTATCTAAAAGGAGCTGGTGTGCGTTTGAATCAAGCTTTGATAAACTATGGCCTTGACTTTTTGGAGAAAAGGGGTTATACAGAACTGCAGACTCCTTTCTTCATGAGAAAAGATATCATGGCTAGATGTGCTCAATTGGCACAATTTGACGAAGAACTTTATAAGGTTACTGGTGAGGGTGATGATAAATATCTAATTGCCACCGCTGAACAACCACTTTGTTCATATCATCTTGAAGATTGGATTCATCCTTCTCAATTGCCTATAAGGTACGCTGGATATTCATCTTGCTTTCGTAAAGAAGCAGGTTCCCATGGCCGAGATACTCTTGGAATCTTCCGAGTCCACCAATTCGAGAAAGTAGAGCAATTTTGTATCACCAGCCCTAACGACAATGATTCGTGGGACATGCATGAAGAGATGATAAAAAATTCCGAGGAATTCTACAAGACGTTAAATATCCCATACCAAGTTGTGGCTATAGTTTCTGGTGCATTAAATGATGCAGCTGCCAAGAAATATGACTTAGAAGCATGGTTTCCTGCATCTCAGACTTACAGAGAGTTAGTATCATGTTCTAATTGCACTGACTATCAGTCCAGAAGGTTAGAGATTCGATACGGTCAGAAAAAGAAAGGACTCTATGCTGCATTCTTGAGAACTACCAAAAAGAaGATGGGGTTGAAGTACCTGAAGTTCTACGACCATATTTGGGTGGAAAGGCATTTCTACCCTTCAAAACAAAACCGACAGGGAGCGATTCCAAAGGGAAGAAATCGAAGGCCTAATTGTGTACTTTTCTTTTCTCTCCCTTTGAATTATTAA

Protein sequence

MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKINKQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSNDEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQALINYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKKGLYAAFLRTTKKKMGLKYLKFYDHIWVERHFYPSKQNRQGAIPKGRNRRPNCVLFFSLPLNY*

Homology

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BLAST of Cucsa.019310.3 vs. Swiss-Prot
Match: SYS_HELAN (Serine--tRNA ligase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 2.4e-181
Identity = 303/378 (80.16%), Postives = 344/378 (91.01%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFREEKG NPEI+RESQRRR A+VE+VDE+IKLDKEWRQRQFELE LRK+FN+IN
Sbjct: 1   MLDINLFREEKGGNPEIVRESQRRRGASVEIVDEIIKLDKEWRQRQFELEQLRKDFNRIN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           K++A+LRI+G DAS  IK+TEENK  +A+K  E ++    L SKLE +GNLVHDSVPVSN
Sbjct: 61  KEVAKLRISGGDASSLIKNTEENKDSTAKKQAEVQEARTALYSKLETVGNLVHDSVPVSN 120

Query: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180
           DEA+N V+R+WGE+  +  LKNHV+LVELL IAD K+G+ +AGGRGYYLKG GVRLNQAL
Sbjct: 121 DEADNAVVRTWGERREETNLKNHVELVELLGIADLKKGANVAGGRGYYLKGDGVRLNQAL 180

Query: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
           IN+GLDFLEKR YT LQTPFFMRKDIM +CAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKRKYTALQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240

Query: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300
           C+YH++DWIHP++LP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFC+T P+ ND
Sbjct: 241 CAYHIDDWIHPNELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTKPSGND 300

Query: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360
           SW+MHEEMIKNSEEFY+ L +PYQVV+IVSGALNDAAAKKYDLEAWFPAS+TYRELVSCS
Sbjct: 301 SWEMHEEMIKNSEEFYQMLKLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCS 360

Query: 361 NCTDYQSRRLEIRYGQKK 379
           NCTDYQSR+LEIR GQKK
Sbjct: 361 NCTDYQSRKLEIRCGQKK 378

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BLAST of Cucsa.019310.3 vs. Swiss-Prot
Match: SYSC_ARATH (Serine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At5g27470 PE=2 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 8.9e-176
Identity = 293/381 (76.90%), Postives = 343/381 (90.03%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFREEKGNNPEIIRESQRRRFA+VE+VDE+IKLDKEWRQRQFE+++ RKEFNK+N
Sbjct: 1   MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           KQ+AQL+I  EDASE I+ TE+NK+ S  K+ E ++    L +KLE +GNLVHDSVPV  
Sbjct: 61  KQVAQLKIKKEDASEIIQQTEKNKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPVDK 120

Query: 121 DEANNVVIRSWGEKLVKP---KLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLN 180
           DEANN+VI+ WGEK       KLKNHVDLVELL IAD+KRG+EIAG RG++LKG G+ LN
Sbjct: 121 DEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLN 180

Query: 181 QALINYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAE 240
           QALIN+GL FL+KRG+T LQ PFFMRKD+MA+CAQLAQFDEELYKVTGEGDDKYLIATAE
Sbjct: 181 QALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 240

Query: 241 QPLCSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN 300
           QPLC+YH+++WIHP++LP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK+EQFCIT PN
Sbjct: 241 QPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPN 300

Query: 301 DNDSWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELV 360
           +N SW+M +EM+KNSE+FY+ L +PYQ+V+IVSGALNDAAAKKYDLEAWFP+S+T+RELV
Sbjct: 301 ENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFRELV 360

Query: 361 SCSNCTDYQSRRLEIRYGQKK 379
           SCSNCTDYQ+RRLEIRYGQKK
Sbjct: 361 SCSNCTDYQARRLEIRYGQKK 381

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BLAST of Cucsa.019310.3 vs. Swiss-Prot
Match: SYSC_DICDI (Serine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum GN=serS PE=1 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.2e-124
Identity = 219/379 (57.78%), Postives = 280/379 (73.88%), Query Frame = 1


Query: 2   LDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKINK 61
           LDI LFR +KG NP++IR+SQ+ R+ANV+ V EVI LDK  ++ ++ L+N   E+ K+NK
Sbjct: 3   LDIVLFRADKGGNPDLIRQSQKVRYANVDAVQEVIDLDKVVKETKYRLDNTNAEYAKLNK 62

Query: 62  QIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSND 121
            +A  + AGE A E I   EE  +   +   E  +V   L  KL  IGN+VH+SVP+ N+
Sbjct: 63  SVAMKKKAGESADEIIAQAEELNQSIIKLKAEVSEVELLLRKKLRPIGNIVHESVPIDNN 122

Query: 122 EANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQALI 181
           E NN +I++WGE      L +H +L+E+++  D +RG+ ++G R Y+LKG GV LNQA+I
Sbjct: 123 EDNNQIIKTWGECKTSEGLLHHHELLEMIDGYDPERGTLVSGHRCYFLKGIGVLLNQAII 182

Query: 182 NYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC 241
           N+ L  + KRG   LQTPFFM KD+MA+ AQL QFD+ELYKVTG+ ++KYLIAT+EQP+ 
Sbjct: 183 NFALMHMTKRGSVPLQTPFFMNKDVMAKTAQLEQFDDELYKVTGDNEEKYLIATSEQPIS 242

Query: 242 SYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDS 301
           ++H ++WI    LP +Y GYS+CFRKEAGSHGRDT GIFRVHQFEK+EQFCIT P    S
Sbjct: 243 AFHQDEWIEEKDLPKKYVGYSTCFRKEAGSHGRDTWGIFRVHQFEKIEQFCITEP--EKS 302

Query: 302 WDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCSN 361
           WDM EEMI NSE+FY+ L IPY+VV IVSGALN+AA+KKYDLE WFP    YRELVSCSN
Sbjct: 303 WDMMEEMINNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWFPGYNQYRELVSCSN 362

Query: 362 CTDYQSRRLEIRYGQKKKG 381
           CTDYQSR LEIR G KK+G
Sbjct: 363 CTDYQSRDLEIRCGMKKQG 379

[Close]

BLAST of Cucsa.019310.3 vs. Swiss-Prot
Match: SYSC_SCHPO (Serine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29A4.15 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 2.5e-117
Identity = 220/389 (56.56%), Postives = 283/389 (72.75%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLF+ EKG NPEIIRESQR+R A+V +VD+VI++ KEW   +FEL+N  K  N++ 
Sbjct: 1   MLDINLFQVEKGGNPEIIRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQ 60

Query: 61  KQIAQLRIAGEDASERIKD----TEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSV 120
           K+I     A EDASE +++    TE  K L  ++  + K++L  ++S    IGN+VHDSV
Sbjct: 61  KEIGLKMKAKEDASELLEEKNSLTERKKNLIEQETAKNKEMLNVVSS----IGNIVHDSV 120

Query: 121 PVSNDEANNVVIRSWGEKLVKPKLKN---HVDLVELLEIADSKRGSEIAGGRGYYLKGAG 180
           PVS DE NN +IR W  + V  + KN   H +++  L+  D +RG +++G RGY+L+  G
Sbjct: 121 PVSMDEDNNEIIRKWAPEGVTVEKKNCLSHHEVLTRLDGYDPERGVKVSGHRGYFLRQYG 180

Query: 181 VRLNQALINYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLI 240
           V  N ALI YGLDFLEKRGY  LQ P  + KD+MA+ AQL QFDEELYKV    +++YLI
Sbjct: 181 VFFNLALIQYGLDFLEKRGYIALQAPTMLNKDVMAKTAQLEQFDEELYKVIDGDEERYLI 240

Query: 241 ATAEQPLCSYHLEDWIH-PS-QLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 300
           AT+EQP+ +YH  +W   PS QLP++YAGYS+C+R+EAGSHGRD  GIFRVH FEK+EQF
Sbjct: 241 ATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAFEKIEQF 300

Query: 301 CITSPNDNDSWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQ 360
            +T P    SW+   EMI ++E+FYK+L +PY++VAIVSGALN+AAAKKYDLEAWFP   
Sbjct: 301 VLTDPEK--SWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEAWFPFQG 360

Query: 361 TYRELVSCSNCTDYQSRRLEIRYGQKKKG 381
            Y+ELVSCSNCTDYQSR LEIR G KK G
Sbjct: 361 EYKELVSCSNCTDYQSRNLEIRCGVKKMG 383

[Close]

BLAST of Cucsa.019310.3 vs. Swiss-Prot
Match: SYSC_CAEEL (Probable serine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=srs-2 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.8e-113
Identity = 219/416 (52.64%), Postives = 288/416 (69.23%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           +LDI++FR EKG NPEIIR+SQ+ RF + +LVDEVI+LD++WR+ +F  + L ++ N I+
Sbjct: 2   VLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAIS 61

Query: 61  KQI------------------------AQLRIAGEDASERIKDTEENKKLSAEKDVE-AK 120
           K I                        A+L+I  E +   +   ++ + L  EK V+ A 
Sbjct: 62  KAIGEKMKKKEPQGTDDSVADDIVARLAELKI-DELSQLTVVQLKKLRVLVDEKSVQTAA 121

Query: 121 DVLKKLNS---KLEIIGNLVHDSVPVSNDEANNVVIRSWGEKLVKPKLKNHVDLVELLEI 180
            V+   N+   KL  IGNL+H SV VS DEANN + R++G+   K K  +HVDLV +++ 
Sbjct: 122 AVIANENARHEKLIQIGNLIHSSVVVSKDEANNKIERTFGDLSTKKKY-SHVDLVVMVDG 181

Query: 181 ADSKRGSEIAGGRGYYLKGAGVRLNQALINYGLDFLEKRGYTELQTPFFMRKDIMARCAQ 240
            D +RG+ +AGGRGY+LKG  V L QA+I   L  L  +GY  L TPFFMRK++M   AQ
Sbjct: 182 FDGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNVKGYVPLYTPFFMRKEVMQEVAQ 241

Query: 241 LAQFDEELYKVTGEG---------DDKYLIATAEQPLCSYHLEDWIHPSQLPIRYAGYSS 300
           L+QFD+ELYKV+ +G         D+KYLIAT+EQP+ +YH  +WI  ++LPI+YAG S+
Sbjct: 242 LSQFDDELYKVSSKGSEIAGDTSVDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVST 301

Query: 301 CFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWDMHEEMIKNSEEFYKTLNIPY 360
           CFR+E GSHGRDT GIFRVHQFEK+EQF + SPNDN+SW + +EMI N+E +Y+ L IPY
Sbjct: 302 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPY 361

Query: 361 QVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKK 380
           QVV IVSG LN+AAAKK+DLEAWFP S  YRELVSCSNC DYQSRRL++RYGQ KK
Sbjct: 362 QVVNIVSGELNNAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKK 415

[Close]

BLAST of Cucsa.019310.3 vs. TrEMBL
Match: A0A0A0KL58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002590 PE=4 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 2.5e-217
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN
Sbjct: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN
Sbjct: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120

Query: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180
           DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL
Sbjct: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180

Query: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
           INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240

Query: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300
           CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND
Sbjct: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300

Query: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360
           SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS
Sbjct: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360

Query: 361 NCTDYQSRRLEIRYGQKK 379
           NCTDYQSRRLEIRYGQKK
Sbjct: 361 NCTDYQSRRLEIRYGQKK 378

[Close]

BLAST of Cucsa.019310.3 vs. TrEMBL
Match: M5VY64_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005710mg PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 7.1e-196
Identity = 331/378 (87.57%), Postives = 363/378 (96.03%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFREEKGNNPEIIRESQRRRF  VE+VDEVI+LDKEWRQRQFELENLRKEFNKIN
Sbjct: 1   MLDINLFREEKGNNPEIIRESQRRRFKAVEIVDEVIQLDKEWRQRQFELENLRKEFNKIN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           K++AQLRIAGEDA+  IKDTEENK+L+AEK+VE ++ L +LNSKLE+IGNLVHDSVP+SN
Sbjct: 61  KRVAQLRIAGEDATAVIKDTEENKRLAAEKEVEVREALTQLNSKLEVIGNLVHDSVPISN 120

Query: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180
           DE NN VIRSWGEK ++PKLKNHV+LVELL IAD K+G+E+AGGRG+YLKGAGVRLNQAL
Sbjct: 121 DEENNAVIRSWGEKRMEPKLKNHVELVELLGIADLKKGAEVAGGRGFYLKGAGVRLNQAL 180

Query: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
           IN+GLDFLEKRGYTELQTPFFMRKDIMA+CAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKRGYTELQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240

Query: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300
           CSYH++DWIHPSQLP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSP+ +D
Sbjct: 241 CSYHIDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPDGSD 300

Query: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360
           SW+MHEEMIKNSE+FYK+LN+PY VVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS
Sbjct: 301 SWEMHEEMIKNSEDFYKSLNLPYHVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360

Query: 361 NCTDYQSRRLEIRYGQKK 379
           NCTDYQSR+LE RYGQKK
Sbjct: 361 NCTDYQSRKLETRYGQKK 378

[Close]

BLAST of Cucsa.019310.3 vs. TrEMBL
Match: D7U1Z6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0128g00370 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 2.7e-195
Identity = 333/378 (88.10%), Postives = 359/378 (94.97%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFRE+KG+NPEIIRESQRRR+ANVELVDEVI LDKEWRQRQFE ENLRKEFNKIN
Sbjct: 1   MLDINLFREDKGHNPEIIRESQRRRYANVELVDEVIHLDKEWRQRQFEYENLRKEFNKIN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           KQ+A+L+I+GEDASE IK T+ENK+L+++K+ E ++ L  LNSKLEIIGNLVHDSVPVSN
Sbjct: 61  KQVAKLKISGEDASEMIKSTDENKRLTSKKEAEVQEALAALNSKLEIIGNLVHDSVPVSN 120

Query: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180
           DEANN VIRSWGEK V+PKLKNHV+LVELL IAD K+G+ IAGGRG+YLKG GVRLNQAL
Sbjct: 121 DEANNAVIRSWGEKKVEPKLKNHVELVELLGIADLKKGANIAGGRGFYLKGDGVRLNQAL 180

Query: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
           IN+GLDFLEKRGYT LQTPFFMRKDIMA+CAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240

Query: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300
           C+YHL+DWIHPSQLP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN ND
Sbjct: 241 CAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND 300

Query: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360
           SWDMHEEMIKNSE+FYK LNIPYQVVAIVSGALNDAAAKKYDLE WFPASQTYRELVSCS
Sbjct: 301 SWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCS 360

Query: 361 NCTDYQSRRLEIRYGQKK 379
           NCTDYQSRRLEIRYGQKK
Sbjct: 361 NCTDYQSRRLEIRYGQKK 378

[Close]

BLAST of Cucsa.019310.3 vs. TrEMBL
Match: A5BLA2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015339 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 3.1e-191
Identity = 339/434 (78.11%), Postives = 371/434 (85.48%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFRE+KG+NPEIIRESQRRR+ANV+LVDEVI LDKEWRQRQFE ENLRKEFNKIN
Sbjct: 1   MLDINLFREDKGHNPEIIRESQRRRYANVDLVDEVIHLDKEWRQRQFEFENLRKEFNKIN 60

Query: 61  KQIAQLR------------------------------------IAGEDASERIKDTEENK 120
           KQ+A+L+                                    I+GEDASE IK T+ENK
Sbjct: 61  KQVAKLQNLTLTQYCPVQYANCHMSMYPTGVSNKGKAEKKFWFISGEDASEMIKSTDENK 120

Query: 121 KLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSNDEANNVVIRSWGEKLVKPKLKNHV 180
           +L+A+K+ E ++ L  LNSKLEIIGNLVHDSVPVSNDEANN VIRSWGEK V+PKLKNHV
Sbjct: 121 RLTAKKEAEVQEALATLNSKLEIIGNLVHDSVPVSNDEANNAVIRSWGEKKVEPKLKNHV 180

Query: 181 DLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQALINYGLDFLEKRGYTELQTPFFMRK 240
           +LVELL IAD K+G+ IAGGRG+YLKG GVRLNQALIN+GLDFLEKRGYT LQTPFFMRK
Sbjct: 181 ELVELLGIADLKKGANIAGGRGFYLKGDGVRLNQALINFGLDFLEKRGYTALQTPFFMRK 240

Query: 241 DIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCSYHLEDWIHPSQLPIRYAGYSSC 300
           DIMA+CAQLAQFDEELYKVTGEGDDKYLIATAEQPLC+YHL+DWIHPSQLP+RYAGYSSC
Sbjct: 241 DIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHLDDWIHPSQLPLRYAGYSSC 300

Query: 301 FRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWDMHEEMIKNSEEFYKTLNIPYQ 360
           FRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN NDSWDMHEEMIKNSE+FYK LNIPYQ
Sbjct: 301 FRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEDFYKMLNIPYQ 360

Query: 361 VVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKK--KGLY 397
           VVAIVSGALNDAAAKKYDLE WFPASQTYRELVSCSNCTDYQSRRLEIRYGQKK  +G  
Sbjct: 361 VVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKQLRGPS 420

[Close]

BLAST of Cucsa.019310.3 vs. TrEMBL
Match: W9RWJ2_9ROSA (Serine--tRNA ligase OS=Morus notabilis GN=L484_001167 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 8.9e-191
Identity = 324/378 (85.71%), Postives = 355/378 (93.92%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFREEKG NPEIIRESQRRRFANV++VDE+IKLDKEWRQRQFE ENLRKEFNKIN
Sbjct: 1   MLDINLFREEKGGNPEIIRESQRRRFANVDIVDEIIKLDKEWRQRQFEFENLRKEFNKIN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           KQ+AQLRI+G DA+E IK+TE++KK  AEK+VE K+ LK+LNS LEIIGNLVHDSVP+SN
Sbjct: 61  KQVAQLRISGGDATEMIKNTEDHKKSIAEKEVEVKEALKQLNSILEIIGNLVHDSVPISN 120

Query: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180
           DEANN VIR WGEK ++PKLKNHV+LVELL IAD+K+G+++AGGRG+YLKG GV LNQAL
Sbjct: 121 DEANNAVIRLWGEKRLEPKLKNHVELVELLGIADTKKGTDVAGGRGFYLKGDGVHLNQAL 180

Query: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
           IN+GL FLEKR +T L TPFFMRKDIMA+CAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLQFLEKREFTALHTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240

Query: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300
           C+YHL+DWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFC+TSPN ND
Sbjct: 241 CAYHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNGND 300

Query: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360
           SWDMHEEMIKNSE+FYK L IPYQVV+IVSGALNDAAAKKYDLE WFPASQTYRELVSCS
Sbjct: 301 SWDMHEEMIKNSEDFYKMLKIPYQVVSIVSGALNDAAAKKYDLEGWFPASQTYRELVSCS 360

Query: 361 NCTDYQSRRLEIRYGQKK 379
           NCTDYQSRRLEIR+GQKK
Sbjct: 361 NCTDYQSRRLEIRFGQKK 378

[Close]

BLAST of Cucsa.019310.3 vs. TAIR10
Match: AT5G27470.1 (AT5G27470.1 seryl-tRNA synthetase / serine--tRNA ligase)

HSP 1 Score: 617.8 bits (1592), Expect = 5.0e-177
Identity = 293/381 (76.90%), Postives = 343/381 (90.03%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFREEKGNNPEIIRESQRRRFA+VE+VDE+IKLDKEWRQRQFE+++ RKEFNK+N
Sbjct: 1   MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           KQ+AQL+I  EDASE I+ TE+NK+ S  K+ E ++    L +KLE +GNLVHDSVPV  
Sbjct: 61  KQVAQLKIKKEDASEIIQQTEKNKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPVDK 120

Query: 121 DEANNVVIRSWGEKLVKP---KLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLN 180
           DEANN+VI+ WGEK       KLKNHVDLVELL IAD+KRG+EIAG RG++LKG G+ LN
Sbjct: 121 DEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLN 180

Query: 181 QALINYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAE 240
           QALIN+GL FL+KRG+T LQ PFFMRKD+MA+CAQLAQFDEELYKVTGEGDDKYLIATAE
Sbjct: 181 QALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 240

Query: 241 QPLCSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN 300
           QPLC+YH+++WIHP++LP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK+EQFCIT PN
Sbjct: 241 QPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPN 300

Query: 301 DNDSWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELV 360
           +N SW+M +EM+KNSE+FY+ L +PYQ+V+IVSGALNDAAAKKYDLEAWFP+S+T+RELV
Sbjct: 301 ENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFRELV 360

Query: 361 SCSNCTDYQSRRLEIRYGQKK 379
           SCSNCTDYQ+RRLEIRYGQKK
Sbjct: 361 SCSNCTDYQARRLEIRYGQKK 381

[Close]

BLAST of Cucsa.019310.3 vs. TAIR10
Match: AT1G11870.2 (AT1G11870.2 Seryl-tRNA synthetase)

HSP 1 Score: 212.2 bits (539), Expect = 6.4e-55
Identity = 126/367 (34.33%), Postives = 207/367 (56.40%), Query Frame = 1


Query: 13  NNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKINKQIAQLRIAGED 72
           +N E +  + R R +N  L + V++L +     Q E+E LR+E N + K++        +
Sbjct: 86  DNKEAVEINIRNRNSNANL-EAVLQLYENMVNLQKEVERLREERNNVAKKMK----GKLE 145

Query: 73  ASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIG----NLVHDSVPVSNDEANNVVI 132
            SER +  EE K L  E  V  ++ L KL  +L+ +     N+ H  VPV  ++++ +  
Sbjct: 146 PSERERLVEEGKNLK-ESLVTLEEDLVKLKDELQHVAQSIPNMTHPDVPVGGEDSSAIRQ 205

Query: 133 RSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQALINYGLDFL 192
                +     +K+H+ L + L++ D    +E++G + +YLK   V L  AL+N+ L  +
Sbjct: 206 EVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLEMALLNWTLSQV 265

Query: 193 EKRGYTELQTPFFMRKDIMARCAQLAQFDE-ELYKVTGEGDDKYLIATAEQPLCSYHLED 252
            K+GYT L TP  +R  I+ +C    + D  ++Y +  +G D+ LI TAE P+   H++ 
Sbjct: 266 MKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSI--DGTDQCLIGTAEIPVGGIHMDS 325

Query: 253 WIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDNDSWDMHEE 312
            +  S LP++Y  +S CFR EAG+ G  T G++RVHQF K E F I  P D++S+  H+E
Sbjct: 326 ILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQPEDSESF--HQE 385

Query: 313 MIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCSNCTDYQS 372
           +I+  E+ + +L + ++ + + +  L   A +K+D+EAW P    + E+ S SNCTDYQS
Sbjct: 386 LIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEISSASNCTDYQS 442

Query: 373 RRLEIRY 375
           RRL IRY
Sbjct: 446 RRLGIRY 442

[Close]

BLAST of Cucsa.019310.3 vs. NCBI nr
Match: gi|778697943|ref|XP_011654444.1| (PREDICTED: serine--tRNA ligase [Cucumis sativus])

HSP 1 Score: 762.7 bits (1968), Expect = 3.6e-217
Identity = 378/378 (100.00%), Postives = 378/378 (100.00%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN
Sbjct: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN
Sbjct: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120

Query: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180
           DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL
Sbjct: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180

Query: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
           INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240

Query: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300
           CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND
Sbjct: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300

Query: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360
           SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS
Sbjct: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360

Query: 361 NCTDYQSRRLEIRYGQKK 379
           NCTDYQSRRLEIRYGQKK
Sbjct: 361 NCTDYQSRRLEIRYGQKK 378

[Close]

BLAST of Cucsa.019310.3 vs. NCBI nr
Match: gi|659129563|ref|XP_008464736.1| (PREDICTED: serine--tRNA ligase [Cucumis melo])

HSP 1 Score: 755.7 bits (1950), Expect = 4.4e-215
Identity = 373/378 (98.68%), Postives = 377/378 (99.74%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN
Sbjct: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           KQIAQLRIAGEDASERIKDTEENK+LSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN
Sbjct: 61  KQIAQLRIAGEDASERIKDTEENKRLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120

Query: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180
           DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIAD+KRGSEIAGGRGYYLKGAGVRLNQAL
Sbjct: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADTKRGSEIAGGRGYYLKGAGVRLNQAL 180

Query: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
           INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240

Query: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300
           CSYHLEDWIHPSQLP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN ND
Sbjct: 241 CSYHLEDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND 300

Query: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360
           SWDMHEEMIKNSE+FYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS
Sbjct: 301 SWDMHEEMIKNSEDFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360

Query: 361 NCTDYQSRRLEIRYGQKK 379
           NCTDYQSRRLEIRYGQKK
Sbjct: 361 NCTDYQSRRLEIRYGQKK 378

[Close]

BLAST of Cucsa.019310.3 vs. NCBI nr
Match: gi|645222203|ref|XP_008246480.1| (PREDICTED: serine--tRNA ligase [Prunus mume])

HSP 1 Score: 692.2 bits (1785), Expect = 5.9e-196
Identity = 330/378 (87.30%), Postives = 364/378 (96.30%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFREEKGNNPEIIRESQRRRF  VE+VDEVI+LDKEWRQRQFELENLRKEFNKIN
Sbjct: 1   MLDINLFREEKGNNPEIIRESQRRRFKGVEIVDEVIQLDKEWRQRQFELENLRKEFNKIN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           K++AQLRIAGEDA++ IKDTEENK+L+AEK++E ++ L +LNSKLE+IGNLVHDSVP+SN
Sbjct: 61  KRVAQLRIAGEDATDVIKDTEENKRLAAEKELEVREALTQLNSKLEVIGNLVHDSVPISN 120

Query: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180
           DE NN VIRSWGEK ++PKLKNHV+LVELL IAD K+G+E+AGGRG+YLKGAGVRLNQAL
Sbjct: 121 DEENNAVIRSWGEKRMEPKLKNHVELVELLGIADLKKGAEVAGGRGFYLKGAGVRLNQAL 180

Query: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
           IN+GLDFLEKRGYTELQTPFFMRKDIMA+CAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKRGYTELQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240

Query: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300
           CSYH++DWIHPSQLP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSP+ +D
Sbjct: 241 CSYHIDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPDGSD 300

Query: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360
           SW+MHEEMIKNSE+FYK+LN+PY VVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS
Sbjct: 301 SWEMHEEMIKNSEDFYKSLNLPYHVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360

Query: 361 NCTDYQSRRLEIRYGQKK 379
           NCTDYQSR+LE RYGQKK
Sbjct: 361 NCTDYQSRKLETRYGQKK 378

[Close]

BLAST of Cucsa.019310.3 vs. NCBI nr
Match: gi|595824204|ref|XP_007205198.1| (hypothetical protein PRUPE_ppa005710mg [Prunus persica])

HSP 1 Score: 691.4 bits (1783), Expect = 1.0e-195
Identity = 331/378 (87.57%), Postives = 363/378 (96.03%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFREEKGNNPEIIRESQRRRF  VE+VDEVI+LDKEWRQRQFELENLRKEFNKIN
Sbjct: 1   MLDINLFREEKGNNPEIIRESQRRRFKAVEIVDEVIQLDKEWRQRQFELENLRKEFNKIN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           K++AQLRIAGEDA+  IKDTEENK+L+AEK+VE ++ L +LNSKLE+IGNLVHDSVP+SN
Sbjct: 61  KRVAQLRIAGEDATAVIKDTEENKRLAAEKEVEVREALTQLNSKLEVIGNLVHDSVPISN 120

Query: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180
           DE NN VIRSWGEK ++PKLKNHV+LVELL IAD K+G+E+AGGRG+YLKGAGVRLNQAL
Sbjct: 121 DEENNAVIRSWGEKRMEPKLKNHVELVELLGIADLKKGAEVAGGRGFYLKGAGVRLNQAL 180

Query: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
           IN+GLDFLEKRGYTELQTPFFMRKDIMA+CAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKRGYTELQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240

Query: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300
           CSYH++DWIHPSQLP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSP+ +D
Sbjct: 241 CSYHIDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPDGSD 300

Query: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360
           SW+MHEEMIKNSE+FYK+LN+PY VVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS
Sbjct: 301 SWEMHEEMIKNSEDFYKSLNLPYHVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360

Query: 361 NCTDYQSRRLEIRYGQKK 379
           NCTDYQSR+LE RYGQKK
Sbjct: 361 NCTDYQSRKLETRYGQKK 378

[Close]

BLAST of Cucsa.019310.3 vs. NCBI nr
Match: gi|225450981|ref|XP_002284787.1| (PREDICTED: serine--tRNA ligase [Vitis vinifera])

HSP 1 Score: 689.5 bits (1778), Expect = 3.9e-195
Identity = 333/378 (88.10%), Postives = 359/378 (94.97%), Query Frame = 1


Query: 1   MLDINLFREEKGNNPEIIRESQRRRFANVELVDEVIKLDKEWRQRQFELENLRKEFNKIN 60
           MLDINLFRE+KG+NPEIIRESQRRR+ANVELVDEVI LDKEWRQRQFE ENLRKEFNKIN
Sbjct: 1   MLDINLFREDKGHNPEIIRESQRRRYANVELVDEVIHLDKEWRQRQFEYENLRKEFNKIN 60

Query: 61  KQIAQLRIAGEDASERIKDTEENKKLSAEKDVEAKDVLKKLNSKLEIIGNLVHDSVPVSN 120
           KQ+A+L+I+GEDASE IK T+ENK+L+++K+ E ++ L  LNSKLEIIGNLVHDSVPVSN
Sbjct: 61  KQVAKLKISGEDASEMIKSTDENKRLTSKKEAEVQEALAALNSKLEIIGNLVHDSVPVSN 120

Query: 121 DEANNVVIRSWGEKLVKPKLKNHVDLVELLEIADSKRGSEIAGGRGYYLKGAGVRLNQAL 180
           DEANN VIRSWGEK V+PKLKNHV+LVELL IAD K+G+ IAGGRG+YLKG GVRLNQAL
Sbjct: 121 DEANNAVIRSWGEKKVEPKLKNHVELVELLGIADLKKGANIAGGRGFYLKGDGVRLNQAL 180

Query: 181 INYGLDFLEKRGYTELQTPFFMRKDIMARCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
           IN+GLDFLEKRGYT LQTPFFMRKDIMA+CAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240

Query: 241 CSYHLEDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNDND 300
           C+YHL+DWIHPSQLP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN ND
Sbjct: 241 CAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND 300

Query: 301 SWDMHEEMIKNSEEFYKTLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASQTYRELVSCS 360
           SWDMHEEMIKNSE+FYK LNIPYQVVAIVSGALNDAAAKKYDLE WFPASQTYRELVSCS
Sbjct: 301 SWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCS 360

Query: 361 NCTDYQSRRLEIRYGQKK 379
           NCTDYQSRRLEIRYGQKK
Sbjct: 361 NCTDYQSRRLEIRYGQKK 378

The following BLAST results are available for this feature:

BLAST of Cucsa.019310.3 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SYS_HELAN	2.4e-181	80.16	Serine--tRNA ligase OS=Helianthus annuus PE=2 SV=1	[more]
SYSC_ARATH	8.9e-176	76.90	Serine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana GN=At5g27470 PE=2 SV=1	[more]
SYSC_DICDI	1.2e-124	57.78	Serine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum GN=serS PE=1 SV=1	[more]
SYSC_SCHPO	2.5e-117	56.56	Serine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
SYSC_CAEEL	2.8e-113	52.64	Probable serine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=srs-2 PE=...	[more]

BLAST of Cucsa.019310.3 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL58_CUCSA	2.5e-217	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002590 PE=4 SV=1	[more]
M5VY64_PRUPE	7.1e-196	87.57	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005710mg PE=4 SV=1	[more]
D7U1Z6_VITVI	2.7e-195	88.10	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0128g00370 PE=4 SV=...	[more]
A5BLA2_VITVI	3.1e-191	78.11	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015339 PE=4 SV=1	[more]
W9RWJ2_9ROSA	8.9e-191	85.71	Serine--tRNA ligase OS=Morus notabilis GN=L484_001167 PE=4 SV=1	[more]

BLAST of Cucsa.019310.3 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27470.1	5.0e-177	76.90	seryl-tRNA synthetase / serine--tRNA ligase	[more]
AT1G11870.2	6.4e-55	34.33	Seryl-tRNA synthetase	[more]

BLAST of Cucsa.019310.3 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778697943\|ref\|XP_011654444.1\|	3.6e-217	100.00	PREDICTED: serine--tRNA ligase [Cucumis sativus]	[more]
gi\|659129563\|ref\|XP_008464736.1\|	4.4e-215	98.68	PREDICTED: serine--tRNA ligase [Cucumis melo]	[more]
gi\|645222203\|ref\|XP_008246480.1\|	5.9e-196	87.30	PREDICTED: serine--tRNA ligase [Prunus mume]	[more]
gi\|595824204\|ref\|XP_007205198.1\|	1.0e-195	87.57	hypothetical protein PRUPE_ppa005710mg [Prunus persica]	[more]
gi\|225450981\|ref\|XP_002284787.1\|	3.9e-195	88.10	PREDICTED: serine--tRNA ligase [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002314	aa-tRNA-synt_IIb
IPR002317	Ser-tRNA-ligase_type_1
IPR006195	aa-tRNA-synth_II
IPR010978	tRNA-bd_arm
IPR015866	Ser-tRNA-synth_1_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0004812	aminoacyl-tRNA ligase activity
GO:0005524	ATP binding
GO:0004828	serine-tRNA ligase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006418	tRNA aminoacylation for protein translation
GO:0006434	seryl-tRNA aminoacylation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006434	seryl-tRNA aminoacylation
biological_process	GO:0006418	tRNA aminoacylation for protein translation
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006566	threonine metabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004828	serine-tRNA ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.019310	Cucsa.019310	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.019310.3	Cucsa.019310.3-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.019310.3.five_prime_UTR.1	Cucsa.019310.3.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.019310.3.CDS.1	Cucsa.019310.3.CDS.1	CDS
Cucsa.019310.3.CDS.2	Cucsa.019310.3.CDS.2	CDS
Cucsa.019310.3.CDS.3	Cucsa.019310.3.CDS.3	CDS
Cucsa.019310.3.CDS.4	Cucsa.019310.3.CDS.4	CDS
Cucsa.019310.3.CDS.5	Cucsa.019310.3.CDS.5	CDS
Cucsa.019310.3.CDS.6	Cucsa.019310.3.CDS.6	CDS
Cucsa.019310.3.CDS.7	Cucsa.019310.3.CDS.7	CDS
Cucsa.019310.3.CDS.8	Cucsa.019310.3.CDS.8	CDS
Cucsa.019310.3.CDS.9	Cucsa.019310.3.CDS.9	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.019310.3.three_prime_UTR.1	Cucsa.019310.3.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002314	Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)	PFAM	PF00587	tRNA-synt_2b	coord: 221..378 score: 5.3
IPR002317	Serine-tRNA ligase, type1	PRINTS	PR00981	TRNASYNTHSER	coord: 280..293 score: 3.8E-32coord: 322..335 score: 3.8E-32coord: 268..280 score: 3.8E-32coord: 357..373 score: 3.8E-32coord: 339..355 score: 3.8
IPR002317	Serine-tRNA ligase, type1	PIR	PIRSF001529	Ser-tRNA_ligase	coord: 1..391 score: 2.9E
IPR002317	Serine-tRNA ligase, type1	PANTHER	PTHR11778	SERYL-TRNA SYNTHETASE	coord: 1..379 score: 1.3E
IPR002317	Serine-tRNA ligase, type1	TIGRFAMs	TIGR00414	TIGR00414	coord: 1..385 score: 3.5E
IPR006195	Aminoacyl-tRNA synthetase, class II	PROFILE	PS50862	AA_TRNA_LIGASE_II	coord: 142..374 score: 20
IPR010978	tRNA-binding arm	unknown	SSF46589	tRNA-binding arm	coord: 1..117 score: 9.94
IPR015866	Serine-tRNA synthetase, type1, N-terminal	GENE3D	G3DSA:1.10.287.40		coord: 1..105 score: 2.9
IPR015866	Serine-tRNA synthetase, type1, N-terminal	PFAM	PF02403	Seryl_tRNA_N	coord: 1..112 score: 7.0
None	No IPR available	unknown	Coil	Coil	coord: 49..83 scor
None	No IPR available	GENE3D	G3DSA:3.30.930.10		coord: 110..379 score: 2.3E
None	No IPR available	PANTHER	PTHR11778:SF7	SERINE--TRNA LIGASE, CYTOPLASMIC	coord: 1..379 score: 1.3E
None	No IPR available	unknown	SSF55681	Class II aaRS and biotin synthetases	coord: 121..380 score: 3.06