Cucsa.017020.4 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.017020.4
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	BnaA10g09140D protein
Location	scaffold00233 : 174134 .. 177145 (+)
Sequence length	1203

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAAAGAAAATAAGGAGCAAAATAGCACTTGAAAAAAAGATATTAGAAATGAAATGGATTTGTCGAAATGAAATTTGTCAGTGAAAGCATAGTGTGATTGATGAGAAGAGGGCGATAGACGAACTTTTTTGGAGCCGAAAATTGCAGTGAGTTTCACGTTTGATTGTTTGCTGGAGATTGCCGATTAGACAGGTATTCTACACCTTGAGATCTAATTTTACCCTTCATTCAAACTTCTTCTTTGGAGCTTCAGATTTTGTTTCCATTCAATTCACTCACTGAAGGATTCCCAAATTTGAAaCCCCATTtCCCCTTTTGATCTTCCCTCTTTTGTGGGTCATTTCGTTTCTCGTCCCTTCTTGGCTGCAGATTTTGTTGATTTTCTCTTGTGGGTATGGTCTATTTCTCTCTCACTCTCTTGATTAGTCAATTGTTTTGTCTTTTGATTTTTCATCTTCTGTTGATCAATGAATGATATTtCTTTTTGGATTTTCGTTTTTTGCTTTTGGTGGGTTCTTTTGGAATTTCTTTTGCTCTTCTGAAGTGATTGATGATTTGCTTGTTTCTTCTTTGGCACATCGTTTGAATGTCTTTGAGTACCGTTTTTCGATTATGTCTTCTTTGGTTGGAGCTAATTTACTCTTGTTGTTGATGTGATGTTGAAGCAGATATATTTTTTAATGTTGATTTGAATGCCTTTTGAGATTTTTAATTGAAGTGGGATTTGCTTTTGTTTGCTTTACAATGTTCGTGGATAACTTCTAATCTTAACTGAATCTTATCAACTGTGTGGGgTAGGGGGTGAAGATATAGGAAACATGAGAGTTAAGCAATAACACTGTCCTTTCAGAATTCGGGCTATGGTGTTGTTCCTTGAAACTGGCGCTTTGTGGTATAAGATTATGGTTAGAAAGTTATTCTCGTTGCATAGATGCCCATTTCGTTGGCAAGGGCATCGATAGAAATTTGTGGAAAATGATCCTCAATTATTTGCACCATTTTCTTCAATTTGTTACTCTTTCAAGTTTCTCGAAATAGACCCTTGGTGAATGCTTTTCTGACCTCTACCATATTTCCTTCCAAAAAACTCCTCCATTTCCGATTTCATCAATACATTGGATGCCTTGGCTCATATGATATCCATTTTAGAAAGGACCTTTTTTTTtGTATAAAGAAAGGACCTTATTTGATCCTAAGCTATTTAAACTTTATTGTATTGTCTTCCATTCAGGGAGTCTGTTCAGATCTATTTTTCAAGCATAAGCTTGTCTGGTCTCTTGATTCCTTAGATTTTTTCCTTGTCAAATCTTTATCTGGTCAGTTGCCACCACCAGTTTCATAATGCTTCTCCCTTGTTCACAAAACTAAGGAAAATTTTCATTCATAAGAAGGCAAAAGTTCTTTGCTTGGCATGTCTCTTGGAGGGTGGATTAATAGCTACAATGTCATCTAGTGATCTGTTCTTTTTTGTGTTTGTTGTATGCAAATGTGAGAATAAGGATTTAACTAAGTGTGGGAAATATAGCAATTTGTttttttAATAACTTGAAGAGTTTTGCAATTGTTCCCAGTTTAATTTGTCCCTTTGGGCTTTTGGTCCCAAGTTTTCTTTCTTGAGATTTTTCATTCTTTCCTTATAAGCTATTGGAGCCCCTTCCTGTAATTATTATTAGTTGTATATTTTTTAAGGCTCCTACATTTTGTTTCATGTTAGCAATTTGCTTTTCAGGAAACAGTTTAACCATTCCATTCTGTCTCATGAACTCGTTAAGAGTCTCCTTCTCCCCATACGATTCTGGGTGAATTGATTATGAAATTGATATTTCAGATTTTCAAAAAGAGGACAGGATTCATGCTTAGTTTTTAATATTTATTATCTACTTCTTACCAAAATAATAATAATAATAATAATAATAATAATAATAATTTATCCACTTAGAAAATAATCAACGCCAATCTGCCGGCACCCCGTTATTCTTATCATTTTTCTACTTTTTTCAGGTGATGATATGGTAACGAATTGTTAAATTACTTGATTCTTTTtCCTTTTATTCAGCGGCAAGTATTGAAGATCTTCAGTCCTTTGGAGAAACTTGCTTATCTAACAAAAACATGGTTCAGAAACTGCAACCCATCAAAGGTGGTGGAGGATCCGTTAAGGTTGGAGCCACTGGAACTATTAGCTCTCTAATGATGAGGGAATTAGAGTCAATGAGATCTGCCTCCAAGAAGCCGGTAACTTCCAAAAACAAATCTTCATCTGCTGCTACTACTACTACTGTTTCTTCTGCTGCTTCCATTCCTAAACGACTAGGACAAAGTAAATCGTTTGTAGAGGTAAGTGATAGAAGATATAATAGTGTTAATAACAGAAGCTTTGGGAACTCTCATAATGCTACTAAAACTGGTTCGAGGGATGTCCATCGAATGCCAATGCTTAGCTCTAATGATGTTTATACTGATGGAAATAGTTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGATGTAAAGTGCAATAACCCTGATAGAGCTTGGGCTAGCCGCCCTCTATCAAGTCGTCTCAGAAAACTCGGTTTTTCAAAGCTATCTGAAACCTTTGCTTGATTCACATCATACACGACTTCTAGGCTGCTTTCTATCTGAATCTTTGTTATTTAGGAGCTTGCTGCCCCCTCAAGGTTTCTTATAGTTAGTTATAGGGTTTCAAATGATGTATAGAAAGAATGTCGTGTAAGGCTGTAATGGACCTGGGAGGTCAGTAGTCTCATTGACCTGAAATCGATGATGCTATAACAGATGATACACTGCCTTGGATCCCCCTTCATCGGGAGGCTGGCTGTCATTCAGGTATCCTCTAGGTAATTTAGCTGGATTTTAGGCAATTTGGCCATTTCATTTCCTTAGTCTAAAGTGAAAGAAAGCTAGCTTGGCTTTATTATTTGATATGTTATATTTGTTCTCTTCCCATATTTGACATGTTTGTATCCAAAAC

mRNA sequence

TGAAAAAGAAAATAAGGAGCAAAATAGCACTTGAAAAAAAGATATTAGAAATGAAATGGATTTGTCGAAATGAAATTTGTCAGTGAAAGCATAGTGTGATTGATGAGAAGAGGGCGATAGACGAACTTTTTTGGAGCCGAAAATTGCAGTGAGTTTCACGTTTGATTGTTTGCTGGAGATTGCCGATTAGACAGGTGATGATATGGTAACGAATTGTTAAATTACTTGATTCTTTTTCCTTTTATTCAGCGGCAAGTATTGAAGATCTTCAGTCCTTTGGAGAAACTTGCTTATCTAACAAAAACATGGTTCAGAAACTGCAACCCATCAAAGGTGGTGGAGGATCCGTTAAGGTTGGAGCCACTGGAACTATTAGCTCTCTAATGATGAGGGAATTAGAGTCAATGAGATCTGCCTCCAAGAAGCCGGTAACTTCCAAAAACAAATCTTCATCTGCTGCTACTACTACTACTGTTTCTTCTGCTGCTTCCATTCCTAAACGACTAGGACAAAGTAAATCGTTTGTAGAGGTAAGTGATAGAAGATATAATAGTGTTAATAACAGAAGCTTTGGGAACTCTCATAATGCTACTAAAACTGGTTCGAGGGATGTCCATCGAATGCCAATGCTTAGCTCTAATGATGTTTATACTGATGGAAATAGTTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGATGTAAAGTGCAATAACCCTGATAGAGCTTGGGCTAGCCGCCCTCTATCAAGTCGTCTCAGAAAACTCGGTTTTTCAAAGCTATCTGAAACCTTTGCTTGATTCACATCATACACGACTTCTAGGCTGCTTTCTATCTGAATCTTTGTTATTTAGGAGCTTGCTGCCCCCTCAAGGTTTCTTATAGTTAGTTATAGGGTTTCAAATGATGTATAGAAAGAATGTCGTGTAAGGCTGTAATGGACCTGGGAGGTCAGTAGTCTCATTGACCTGAAATCGATGATGCTATAACAGATGATACACTGCCTTGGATCCCCCTTCATCGGGAGGCTGGCTGTCATTCAGGTATCCTCTAGGTAATTTAGCTGGATTTTAGGCAATTTGGCCATTTCATTTCCTTAGTCTAAAGTGAAAGAAAGCTAGCTTGGCTTTATTATTTGATATGTTATATTTGTTCTCTTCCCATATTTGACATGTTTGTATCCAAAAC

Coding sequence (CDS)

ATGGTTCAGAAACTGCAACCCATCAAAGGTGGTGGAGGATCCGTTAAGGTTGGAGCCACTGGAACTATTAGCTCTCTAATGATGAGGGAATTAGAGTCAATGAGATCTGCCTCCAAGAAGCCGGTAACTTCCAAAAACAAATCTTCATCTGCTGCTACTACTACTACTGTTTCTTCTGCTGCTTCCATTCCTAAACGACTAGGACAAAGTAAATCGTTTGTAGAGGTAAGTGATAGAAGATATAATAGTGTTAATAACAGAAGCTTTGGGAACTCTCATAATGCTACTAAAACTGGTTCGAGGGATGTCCATCGAATGCCAATGCTTAGCTCTAATGATGTTTATACTGATGGAAATAGTTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCAGTTGCAATTGTGGATGTAAAGTGCAATAACCCTGATAGAGCTTGGGCTAGCCGCCCTCTATCAAGTCGTCTCAGAAAACTCGGTTTTTCAAAGCTATCTGAAACCTTTGCTTGA

Protein sequence

MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSAASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNSYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA*

Homology

[Close]

BLAST of Cucsa.017020.4 vs. TrEMBL
Match: A0A0A0LAQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G426360 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-87
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60
           MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA
Sbjct: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60

Query: 61  ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNS 120
           ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNS
Sbjct: 61  ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNS 120

Query: 121 YREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA 170
           YREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 YREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA 169

[Close]

BLAST of Cucsa.017020.4 vs. TrEMBL
Match: B9SAH6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0586940 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.7e-31
Identity = 81/167 (48.50%), Postives = 109/167 (65.27%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60
           MVQKL+ IKGGGGS+KVG TGTIS+LM RELES++SA +  V  ++K  +   +  V  +
Sbjct: 1   MVQKLEAIKGGGGSIKVGTTGTISALMTRELESIKSAPQVSVFHQDKPKTVPVS--VPCS 60

Query: 61  ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNS 120
           A  PKR  +  S    S    N++N RS   +    K+ S+  HRMPML S +V  D   
Sbjct: 61  ADSPKRQARKSSDEASSSGCSNTINRRS-PETPRKMKSFSKSTHRMPMLRSENVTLDRTP 120

Query: 121 YREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSET 168
            REK  +KG   V +VD+KC +PD+AWAS P++S+L+KLGFSKLSE+
Sbjct: 121 SREKTNKKGPNIVEVVDIKCGHPDKAWAS-PITSKLKKLGFSKLSES 163

[Close]

BLAST of Cucsa.017020.4 vs. TrEMBL
Match: A0A061F5X8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030966 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.0e-31
Identity = 81/169 (47.93%), Postives = 111/169 (65.68%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60
           MVQKL+ IKGGGGSVKVG TGTISSLM REL+S++ A + P + ++K  +   +    SA
Sbjct: 1   MVQKLEAIKGGGGSVKVGTTGTISSLMTRELDSIKPAPQTPASFRHKPQTVPVSVACGSA 60

Query: 61  ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGS--RDVHRMPMLSSNDVYTDG 120
              PKR    KS    S     S N+ S+ +   A KT S  ++VH++PML S+++  D 
Sbjct: 61  T--PKRFQLRKSMDGASTS--GSSNSMSYKSPQTAQKTKSHLKNVHQIPMLGSDNIALDR 120

Query: 121 NSYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSET 168
              R+K ++K    V +VD+KC NPDRAWAS P+++RL+KLGFSKLSE+
Sbjct: 121 TPTRQKSDKKVSNIVEVVDIKCGNPDRAWAS-PVTNRLKKLGFSKLSES 164

[Close]

BLAST of Cucsa.017020.4 vs. TrEMBL
Match: A0A067L3L4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00847 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.0e-30
Identity = 80/168 (47.62%), Postives = 112/168 (66.67%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60
           MVQKL+ IKGGGGS++VG TGTIS+LM RELES +SA    V+ ++K  S     +V  +
Sbjct: 1   MVQKLKAIKGGGGSIRVGTTGTISALMTRELESTKSAPHASVSHQDKPKS--VPVSVPCS 60

Query: 61  ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNS 120
           A+ PKRL   KS  E S    +S  +RS   ++   K+ ++  HR+PML + +V  D   
Sbjct: 61  ATTPKRLQARKSLDEASS---SSAIHRS-PETNRKMKSYTKSSHRVPMLRAENVTLDRTP 120

Query: 121 YREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETF 169
            REK  +KG   V +VD+KC +PD+AW+S P++++LRKLGFSKLSE+F
Sbjct: 121 SREKTNKKGANIVEVVDIKCGHPDKAWSS-PITNKLRKLGFSKLSESF 161

[Close]

BLAST of Cucsa.017020.4 vs. TrEMBL
Match: A0A0B2PW17_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_019911 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.7e-29
Identity = 82/169 (48.52%), Postives = 107/169 (63.31%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60
           M Q L+ IKGGGGS+K+G TGTISSLM REL+ + SASKK V+S  +S +     +V   
Sbjct: 1   MAQSLKGIKGGGGSIKLGTTGTISSLMTRELDHISSASKKQVSSA-RSKTQTLPVSVPCG 60

Query: 61  ASIPKRLGQSKSFVEVSDRRYNSV-NNRSFGN-SHNATKTGSRDVHRMPMLSSNDVYTDG 120
           ++  KRL Q KS VE      + + N R  GN     TKT  R+  R+PML S+      
Sbjct: 61  STTQKRLQQRKSSVEAGSSGSSKITNRRGPGNVMPQKTKTNGRNTQRIPMLGSDKCSVVR 120

Query: 121 NSYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSET 168
            S REK ++K    V IVD+KC N ++AWA+ PL+SRL+KLGFSKLSE+
Sbjct: 121 TSVREKNDKKIPNIVEIVDIKCGNAEKAWAT-PLASRLKKLGFSKLSES 167

[Close]

BLAST of Cucsa.017020.4 vs. TAIR10
Match: AT5G54850.1 (AT5G54850.1 unknown protein)

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-27
Identity = 76/203 (37.44%), Postives = 111/203 (54.68%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60
           MVQKL+ IKGGGGS+K+GATGT+++LM REL+SM+  S K  T++   ++   +    ++
Sbjct: 1   MVQKLEQIKGGGGSIKIGATGTVATLMTRELDSMKQTSPKTPTTRPIRTTIPVSVDCGTS 60

Query: 61  ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKT-----------------GSRDV 120
           +S P+R    KS  E S    ++VNN      HNA  T                  ++ +
Sbjct: 61  SSTPRRTKPRKSSDEASSS--SNVNNVRTPKGHNAKTTHQLSMLGSDNVRTSKGHNAKSI 120

Query: 121 HRMPMLSSNDVYTDGNSYREKPERK----GLRAVA---------------IVDVKCNNPD 168
           H++ ML S++V T    +  K   +    G   V+               IVDVKC NPD
Sbjct: 121 HQLSMLGSDNVRTPKGHHNTKSTHQLPMLGSENVSLQGTPRREKRMNIVEIVDVKCGNPD 180

[Close]

BLAST of Cucsa.017020.4 vs. NCBI nr
Match: gi|449462896|ref|XP_004149171.1| (PREDICTED: uncharacterized protein LOC101215948 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 1.7e-87
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60
           MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA
Sbjct: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60

Query: 61  ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNS 120
           ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNS
Sbjct: 61  ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNS 120

Query: 121 YREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA 170
           YREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 YREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA 169

[Close]

BLAST of Cucsa.017020.4 vs. NCBI nr
Match: gi|659109039|ref|XP_008454516.1| (PREDICTED: uncharacterized protein LOC103494914 isoform X1 [Cucumis melo])

HSP 1 Score: 322.4 bits (825), Expect = 4.8e-85
Identity = 166/170 (97.65%), Postives = 167/170 (98.24%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATT-TTVSS 60
           MVQKLQPIKGGGGS+KVGATGTISSLMMRELESMRSASKKPVTSKNKSSSA TT TTVSS
Sbjct: 25  MVQKLQPIKGGGGSIKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSATTTTTTVSS 84

Query: 61  AASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGN 120
           A SIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGN
Sbjct: 85  ATSIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGN 144

Query: 121 SYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA 170
           SYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA
Sbjct: 145 SYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA 194

[Close]

BLAST of Cucsa.017020.4 vs. NCBI nr
Match: gi|659109041|ref|XP_008454517.1| (PREDICTED: uncharacterized protein LOC103494914 isoform X2 [Cucumis melo])

HSP 1 Score: 322.4 bits (825), Expect = 4.8e-85
Identity = 166/170 (97.65%), Postives = 167/170 (98.24%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATT-TTVSS 60
           MVQKLQPIKGGGGS+KVGATGTISSLMMRELESMRSASKKPVTSKNKSSSA TT TTVSS
Sbjct: 1   MVQKLQPIKGGGGSIKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSATTTTTTVSS 60

Query: 61  AASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGN 120
           A SIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGN
Sbjct: 61  ATSIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGN 120

Query: 121 SYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA 170
           SYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA
Sbjct: 121 SYREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSETFA 170

[Close]

BLAST of Cucsa.017020.4 vs. NCBI nr
Match: gi|1009111006|ref|XP_015898740.1| (PREDICTED: uncharacterized protein LOC107432175 [Ziziphus jujuba])

HSP 1 Score: 145.6 bits (366), Expect = 8.0e-32
Identity = 77/167 (46.11%), Postives = 112/167 (67.07%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60
           MVQ L+ IKGGGGS+KVGATGTISSLM REL+SM+++S+KP +S+NK  +     +V S 
Sbjct: 1   MVQSLEAIKGGGGSIKVGATGTISSLMTRELDSMKASSQKPASSRNKPQTG--PVSVPSG 60

Query: 61  ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNS 120
           ++ P+RL   KS  E S    ++ NN    +     K+  ++ HR+PML S+++  D   
Sbjct: 61  STTPRRLQPRKSSDEASSSGSSNYNNHINPDFSRKAKSYPKNTHRIPMLGSDNITLDRTP 120

Query: 121 YREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSET 168
            REK ++K      +VD+KC N D+AW +RPL+++L+KL FSKLSE+
Sbjct: 121 SREKTDKKVPNIAEVVDIKCGNSDKAW-TRPLTNKLKKLSFSKLSES 164

[Close]

BLAST of Cucsa.017020.4 vs. NCBI nr
Match: gi|1000957478|ref|XP_015577133.1| (PREDICTED: uncharacterized protein LOC8260804 [Ricinus communis])

HSP 1 Score: 142.5 bits (358), Expect = 6.7e-31
Identity = 81/167 (48.50%), Postives = 109/167 (65.27%), Query Frame = 1


Query: 1   MVQKLQPIKGGGGSVKVGATGTISSLMMRELESMRSASKKPVTSKNKSSSAATTTTVSSA 60
           MVQKL+ IKGGGGS+KVG TGTIS+LM RELES++SA +  V  ++K  +   +  V  +
Sbjct: 1   MVQKLEAIKGGGGSIKVGTTGTISALMTRELESIKSAPQVSVFHQDKPKTVPVS--VPCS 60

Query: 61  ASIPKRLGQSKSFVEVSDRRYNSVNNRSFGNSHNATKTGSRDVHRMPMLSSNDVYTDGNS 120
           A  PKR  +  S    S    N++N RS   +    K+ S+  HRMPML S +V  D   
Sbjct: 61  ADSPKRQARKSSDEASSSGCSNTINRRS-PETPRKMKSFSKSTHRMPMLRSENVTLDRTP 120

Query: 121 YREKPERKGLRAVAIVDVKCNNPDRAWASRPLSSRLRKLGFSKLSET 168
            REK  +KG   V +VD+KC +PD+AWAS P++S+L+KLGFSKLSE+
Sbjct: 121 SREKTNKKGPNIVEVVDIKCGHPDKAWAS-PITSKLKKLGFSKLSES 163

The following BLAST results are available for this feature:

BLAST of Cucsa.017020.4 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAQ8_CUCSA	1.2e-87	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G426360 PE=4 SV=1	[more]
B9SAH6_RICCO	4.7e-31	48.50	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0586940 PE=4 SV=1	[more]
A0A061F5X8_THECC	8.0e-31	47.93	Uncharacterized protein OS=Theobroma cacao GN=TCM_030966 PE=4 SV=1	[more]
A0A067L3L4_JATCU	3.0e-30	47.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00847 PE=4 SV=1	[more]
A0A0B2PW17_GLYSO	5.7e-29	48.52	Uncharacterized protein OS=Glycine soja GN=glysoja_019911 PE=4 SV=1	[more]

BLAST of Cucsa.017020.4 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54850.1	3.7e-27	37.44	unknown protein	[more]

BLAST of Cucsa.017020.4 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462896\|ref\|XP_004149171.1\|	1.7e-87	100.00	PREDICTED: uncharacterized protein LOC101215948 [Cucumis sativus]	[more]
gi\|659109039\|ref\|XP_008454516.1\|	4.8e-85	97.65	PREDICTED: uncharacterized protein LOC103494914 isoform X1 [Cucumis melo]	[more]
gi\|659109041\|ref\|XP_008454517.1\|	4.8e-85	97.65	PREDICTED: uncharacterized protein LOC103494914 isoform X2 [Cucumis melo]	[more]
gi\|1009111006\|ref\|XP_015898740.1\|	8.0e-32	46.11	PREDICTED: uncharacterized protein LOC107432175 [Ziziphus jujuba]	[more]
gi\|1000957478\|ref\|XP_015577133.1\|	6.7e-31	48.50	PREDICTED: uncharacterized protein LOC8260804 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.017020	Cucsa.017020	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.017020.4	Cucsa.017020.4-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.017020.4.five_prime_UTR.1	Cucsa.017020.4.five_prime_UTR.1	five_prime_UTR
Cucsa.017020.4.five_prime_UTR.2	Cucsa.017020.4.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.017020.4.CDS.1	Cucsa.017020.4.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.017020.4.three_prime_UTR.1	Cucsa.017020.4.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36405	FAMILY NOT NAMED	coord: 2..169 score: 3.6
None	No IPR available	PANTHER	PTHR36405:SF1	SUBFAMILY NOT NAMED	coord: 2..169 score: 3.6